View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5012_low_1 (Length: 1071)

Name: NF5012_low_1
Description: NF5012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5012_low_1
NF5012_low_1
[»] chr7 (17 HSPs)
chr7 (78-218)||(35109691-35109831)
chr7 (78-218)||(38265229-38265369)
chr7 (78-218)||(41151172-41151313)
chr7 (78-217)||(21577091-21577230)
chr7 (78-207)||(16059356-16059485)
chr7 (78-211)||(34721834-34721967)
chr7 (78-218)||(12472121-12472261)
chr7 (96-211)||(37095209-37095324)
chr7 (78-217)||(38405147-38405286)
chr7 (91-217)||(245257-245383)
chr7 (78-218)||(45278452-45278592)
chr7 (78-207)||(18116947-18117076)
chr7 (80-205)||(11216771-11216896)
chr7 (78-207)||(48176399-48176529)
chr7 (79-211)||(23028684-23028816)
chr7 (110-211)||(28407540-28407637)
chr7 (168-211)||(39234853-39234896)
[»] chr2 (25 HSPs)
chr2 (78-217)||(45136963-45137102)
chr2 (80-217)||(17136389-17136526)
chr2 (78-217)||(40156040-40156179)
chr2 (78-217)||(25987654-25987794)
chr2 (79-218)||(21637898-21638037)
chr2 (79-217)||(10745225-10745363)
chr2 (78-217)||(2754044-2754183)
chr2 (78-200)||(6672803-6672925)
chr2 (78-211)||(36836328-36836461)
chr2 (78-218)||(5039420-5039560)
chr2 (79-217)||(36380125-36380263)
chr2 (78-211)||(44650393-44650526)
chr2 (79-217)||(26690155-26690293)
chr2 (100-217)||(558432-558549)
chr2 (81-216)||(3200884-3201019)
chr2 (78-217)||(2357069-2357207)
chr2 (78-217)||(7860139-7860278)
chr2 (79-208)||(30372682-30372811)
chr2 (80-211)||(33066592-33066723)
chr2 (79-210)||(13047156-13047282)
chr2 (111-196)||(21487181-21487266)
chr2 (103-207)||(4553561-4553666)
chr2 (761-849)||(39538991-39539079)
chr2 (161-211)||(2098825-2098875)
chr2 (93-148)||(20961496-20961551)
[»] chr3 (26 HSPs)
chr3 (78-211)||(8400855-8400988)
chr3 (78-211)||(7417798-7417931)
chr3 (78-217)||(50823698-50823837)
chr3 (78-217)||(50852023-50852162)
chr3 (78-211)||(35198765-35198898)
chr3 (79-211)||(22855888-22856020)
chr3 (78-218)||(43334046-43334186)
chr3 (89-211)||(52545332-52545454)
chr3 (78-207)||(34824556-34824685)
chr3 (79-207)||(55468000-55468129)
chr3 (93-218)||(29635883-29636009)
chr3 (107-210)||(22371729-22371832)
chr3 (125-211)||(37330606-37330692)
chr3 (100-217)||(19872476-19872593)
chr3 (125-210)||(30534902-30534987)
chr3 (79-174)||(48077977-48078072)
chr3 (125-211)||(37454743-37454829)
chr3 (138-218)||(25910658-25910738)
chr3 (78-218)||(50725989-50726129)
chr3 (78-218)||(50786719-50786859)
chr3 (92-218)||(42876229-42876355)
chr3 (117-212)||(30203652-30203744)
chr3 (110-211)||(25589253-25589347)
chr3 (167-218)||(773666-773717)
chr3 (135-218)||(39438821-39438903)
chr3 (160-205)||(31297529-31297574)
[»] chr8 (21 HSPs)
chr8 (78-218)||(19723311-19723451)
chr8 (79-218)||(11404002-11404141)
chr8 (78-217)||(4840140-4840279)
chr8 (80-218)||(29767190-29767326)
chr8 (80-211)||(32296638-32296769)
chr8 (96-207)||(17095568-17095679)
chr8 (78-217)||(22711509-22711648)
chr8 (81-217)||(28739554-28739690)
chr8 (111-217)||(36261679-36261785)
chr8 (79-218)||(41553286-41553425)
chr8 (107-190)||(21355004-21355087)
chr8 (78-216)||(11610280-11610418)
chr8 (124-218)||(11909415-11909509)
chr8 (81-211)||(30682842-30682971)
chr8 (111-212)||(43288105-43288206)
chr8 (93-177)||(24475029-24475113)
chr8 (80-154)||(27881044-27881118)
chr8 (80-154)||(28021225-28021299)
chr8 (150-217)||(27879553-27879620)
chr8 (150-217)||(28019734-28019801)
chr8 (90-217)||(44741914-44742038)
[»] chr5 (10 HSPs)
chr5 (78-218)||(17064323-17064463)
chr5 (81-212)||(20983001-20983132)
chr5 (78-211)||(37976546-37976683)
chr5 (119-211)||(41910865-41910957)
chr5 (111-205)||(31673863-31673956)
chr5 (95-211)||(5009416-5009531)
chr5 (167-217)||(35237052-35237102)
chr5 (88-206)||(39162859-39162977)
chr5 (79-130)||(35237103-35237154)
chr5 (111-168)||(18303352-18303409)
[»] chr1 (17 HSPs)
chr1 (78-207)||(30054445-30054574)
chr1 (78-217)||(20014458-20014597)
chr1 (79-218)||(30370052-30370191)
chr1 (78-218)||(45324006-45324146)
chr1 (79-218)||(12025182-12025321)
chr1 (79-207)||(21090116-21090244)
chr1 (96-217)||(22024121-22024242)
chr1 (78-216)||(4573379-4573517)
chr1 (78-209)||(30850841-30850972)
chr1 (107-217)||(14498072-14498182)
chr1 (91-218)||(33763246-33763373)
chr1 (104-218)||(33762532-33762646)
chr1 (122-200)||(35371755-35371833)
chr1 (90-198)||(44438562-44438670)
chr1 (137-218)||(35618034-35618115)
chr1 (150-218)||(17015192-17015260)
chr1 (78-124)||(15034455-15034501)
[»] chr4 (27 HSPs)
chr4 (78-218)||(46494390-46494530)
chr4 (78-217)||(51066493-51066632)
chr4 (79-210)||(36192542-36192673)
chr4 (78-217)||(51713958-51714097)
chr4 (78-217)||(32139164-32139303)
chr4 (78-211)||(7173584-7173717)
chr4 (78-211)||(30970383-30970516)
chr4 (78-217)||(50905748-50905887)
chr4 (78-211)||(39863777-39863910)
chr4 (78-180)||(8740448-8740550)
chr4 (107-217)||(29576444-29576554)
chr4 (106-218)||(55231715-55231827)
chr4 (93-218)||(2570216-2570341)
chr4 (78-217)||(47626986-47627127)
chr4 (116-217)||(676766-676867)
chr4 (134-211)||(22304090-22304167)
chr4 (104-217)||(41523423-41523536)
chr4 (79-207)||(2294719-2294841)
chr4 (111-218)||(4080544-4080651)
chr4 (89-218)||(50399634-50399763)
chr4 (89-208)||(51279035-51279154)
chr4 (762-856)||(30909489-30909583)
chr4 (80-181)||(22423378-22423479)
chr4 (145-216)||(23084459-23084530)
chr4 (142-199)||(37990606-37990663)
chr4 (113-212)||(40012548-40012646)
chr4 (164-207)||(51066240-51066283)
[»] chr6 (9 HSPs)
chr6 (78-217)||(35163743-35163882)
chr6 (99-218)||(20685346-20685465)
chr6 (80-217)||(19686820-19686957)
chr6 (78-217)||(2711733-2711866)
chr6 (100-212)||(17948702-17948814)
chr6 (78-216)||(14505519-14505655)
chr6 (105-200)||(15070152-15070247)
chr6 (78-132)||(14496352-14496406)
chr6 (103-181)||(24336640-24336718)
[»] scaffold0021 (1 HSPs)
scaffold0021 (79-211)||(107691-107822)
[»] scaffold0691 (1 HSPs)
scaffold0691 (80-185)||(6994-7099)


Alignment Details
Target: chr7 (Bit Score: 133; Significance: 1e-68; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 35109691 - 35109831
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35109691 ccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 35109790  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  35109791 ggactggggcaccatcccctcaccctaaaatttttgtaacc 35109831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 38265369 - 38265229
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38265369 ccgagagaacctgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 38265270  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  38265269 ggactggggcaccatcccctcaccctaaaatttatgtaacc 38265229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 41151172 - 41151313
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattaccttt-gtaagtgctctttgagcccgaaggtcttccctgcct 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41151172 ccgagagaacccgggttcgagccccgctagtgtctttggagggaggtaaatgtaattaccttttgtaagtgctctttgagcccgaaggtcttccctgcct 41151271  T
Q  177 tggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  41151272 tggactggggcaccatcccctcaccctaaattttttgtaacc 41151313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 21577230 - 21577091
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  21577230 ccgagagaacccgggttcgagccccactaatgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagtccgaaggtcttccctgcctt 21577131  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21577130 ggactggggcaccatcccctcaccctaaaatttttgtaac 21577091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 78 - 207
Target Start/End: Complemental strand, 16059485 - 16059356
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16059485 ccgagagaacccgggttcgagccccgctagtgcctttgcagggaggtaaatgtaattacctttgtaagtgctctctgagcccgaaggtcttccctacctt 16059386  T
Q  178 ggactggggcaccatcccctcactctaaaa 207  Q
    ||||||||||||||||||||||| ||||||    
T  16059385 ggactggggcaccatcccctcaccctaaaa 16059356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 34721834 - 34721967
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34721834 ccgagagaacccggattcaagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggacttccctgcctt 34721933  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||| ||||||||||||||||| ||||||||||    
T  34721934 ggactcgggcaccatcccctcaccctaaaatttt 34721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 12472121 - 12472261
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||    
T  12472121 ccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatataattacctttgtaagtgctctttgagcacgaaggtcttccctgtctt 12472220  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||| ||||||||||||| ||||| ||| |||||||    
T  12472221 ggactggggtaccatcccctcaccctaaactttgtgtaacc 12472261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 37095324 - 37095209
Alignment:
Q  96 gagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatccc 195  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37095324 gagccccgctagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatccc 37095225  T
Q  196 ctcactctaaaatttt 211  Q
    ||||| ||||||||||    
T  37095224 ctcaccctaaaatttt 37095209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 38405286 - 38405147
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||  || ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  38405286 ccgagagaattcgagttcgagcctcgctagtgcctttggagggaggtaaatgtaattatctttgtaagtgctctttgaacccgaaggtcttccctgcctt 38405187  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  38405186 ggactggggcaccatcccctcaccctaaaaattttgtaac 38405147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 245383 - 245257
Alignment:
Q  91 ggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacc 190  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  245383 ggttcgagccccgctagtgcccttggagggaggtaaatgtaattatctttgtaaacgctctttgagcccgaaggtcttccctgccttggactggggcacc 245284  T
Q  191 atcccctcactctaaaatttttgtaac 217  Q
    |||||||||| ||||||||||||||||    
T  245283 atcccctcaccctaaaatttttgtaac 245257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 45278452 - 45278592
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| | |||||| ||||||||||||||    
T  45278452 ccgagataacccgggttcgagccccgctagtgcctttgaagggaagtaaatgtaattatctttgtaagtgctctttaaacccgaatgtcttccctgcctt 45278551  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  45278552 ggactggagcaccatcccctcaccctaaaatttttgtaacc 45278592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 78 - 207
Target Start/End: Complemental strand, 18117076 - 18116947
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  18117076 ccgagagaacccgggttcgagccacgctagtgcctttagagggaggtaaatgtaattacctttgtaggtgctctttgaggtcgaagatcttccctgcctt 18116977  T
Q  178 ggactggggcaccatcccctcactctaaaa 207  Q
    ||||||||||||||||||||||| ||||||    
T  18116976 ggactggggcaccatcccctcaccctaaaa 18116947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 11216771 - 11216896
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||    
T  11216771 gagagaacccgggttcgagccccattagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttctctactttgg 11216870  T
Q  180 actggggcaccatcccctcactctaa 205  Q
    ||| ||||| ||| ||||||| ||||    
T  11216871 actagggcatcattccctcaccctaa 11216896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 78 - 207
Target Start/End: Original strand, 48176399 - 48176529
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccct-gcct 176  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| | |||||||| |||||| ||||||  |||    
T  48176399 ccgagagaatccgggttcgagccccgctagtgcctttggaaggaggtaaatgtaaatacttttgtaagtgttttttgagccggaaggttttccctcccct 48176498  T
Q  177 tggactggggcaccatcccctcactctaaaa 207  Q
    |||||||||||||||||||||||| ||||||    
T  48176499 tggactggggcaccatcccctcaccctaaaa 48176529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 23028684 - 23028816
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||| |||||||||| | || ||| ||||||| |||||| |||||||||||||||||| |||||| | ||||| |||||||| ||||||| ||||     
T  23028684 cgagagaatccgggttcgaactcctctaatgcctttagagggatgtaaatgtaattacctttataagtgttttttgaacccgaaggccttccctacctta 23028783  T
Q  179 gactggggcaccatcccctcactctaaaatttt 211  Q
    ||||| | |||||||| ||||  ||||||||||    
T  23028784 gactgagacaccatcctctcatcctaaaatttt 23028816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 28407540 - 28407637
Alignment:
Q  110 cctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatt 209  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||    |  |||||||| ||||||||||||||||||| ||||||||    
T  28407540 cctttagagggaggtaaatgtaaatacttttgtaagtgctctttgagcccgaaggt----caagccttggattggggcaccatcccctcaccctaaaatt 28407635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 39234853 - 39234896
Alignment:
Q  168 tccctgccttggactggggcaccatcccctcactctaaaatttt 211  Q
    |||||||| |||||||||||||||||||||||| | ||||||||    
T  39234853 tccctgccatggactggggcaccatcccctcacccaaaaatttt 39234896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 5e-68; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 45137102 - 45136963
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45137102 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 45137003  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  45137002 ggactggggcaccatcccttcaccctaaaatttttgtaac 45136963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 80 - 217
Target Start/End: Original strand, 17136389 - 17136526
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  17136389 gagagaacccgggttcgagccccgttagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccccgccttgg 17136488  T
Q  180 actggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17136489 actggggcaccatcccctcaccctaaaatttttgtaac 17136526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 40156040 - 40156179
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40156040 ccgagagaatccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctacctt 40156139  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    | |||||||||||||||||||||  |||||||||||||||    
T  40156140 gaactggggcaccatcccctcaccataaaatttttgtaac 40156179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 25987794 - 25987654
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtc-ttccctgcct 176  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25987794 ccgagagaactcgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagtccgaaggtctttccctgcct 25987695  T
Q  177 tggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  25987694 tggtctggggcaccatcccctcaccctaaaatttttgtaac 25987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 79 - 218
Target Start/End: Original strand, 21637898 - 21638037
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  21637898 cgagagaacccgggtttgagccccgctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccaaaggtcttctctgccttg 21637997  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  21637998 gactagggcaccatcccctcaccctaaaatttttgtaacc 21638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 10745363 - 10745225
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  10745363 cgagagaacccgggtccgagccccgctagtgcctttagagggaggtaaatgtaattatctttgtaagtgctctttgaacccgaaggtattccctgccttg 10745264  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  10745263 gactggggcaccatcccctcaccctaaaatttttgtaac 10745225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 2754183 - 2754044
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||| |||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  2754183 ccgagagaacccggattcgagtcccactaatgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgcctt 2754084  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  2754083 ggactggggcaccatcccctcaccctaaaatttttgtaac 2754044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 6672925 - 6672803
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  6672925 ccgagagaacccgggttcaagccccgctagtgcctttggagggaggtaaatgtaattacctttgtacgcgctctttgagcccgaaggtcttccctgcctt 6672826  T
Q  178 ggactggggcaccatcccctcac 200  Q
    |||||||||||||||||||||||    
T  6672825 ggactggggcaccatcccctcac 6672803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 36836461 - 36836328
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36836461 ccgagagaacccgagttcgagtcccgctggtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgcctt 36836362  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    |||||||||||||||||||||||  |||||||||    
T  36836361 ggactggggcaccatcccctcaccttaaaatttt 36836328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 5039420 - 5039560
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||| ||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  5039420 ccgagagaactcgggttcgagctccgctagtgcttttagagggaggtaaacgtaattacctttgtaagtgctctttgagcccgaagatcttccctacctt 5039519  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  5039520 ggactagggcaccatcccctcactctaaaatttttgtaacc 5039560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 36380263 - 36380125
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    ||||| ||| |||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  36380263 cgagaaaactcgggtttgaaccccgctagtgcctttggagggaggtaaatgtaattccctttgtaagtgctctttgagcccgaaggtcttccctaccttg 36380164  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  36380163 gactgaggcaccatcccctcaccctaaaatttttgtaac 36380125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 44650393 - 44650526
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  44650393 ccgagagaacccgatttcgagctccgttagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagtccgaagatcttccctgcctt 44650492  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    |||| |||||||||||||||||| ||||||||||    
T  44650493 ggaccggggcaccatcccctcaccctaaaatttt 44650526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 79 - 217
Target Start/End: Original strand, 26690155 - 26690293
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||||||    
T  26690155 cgagagaatctgggttcgagtcccgctagtgcttttggagggaggtaaatgtaattacctttgtaagtgatctttgtgttcgaaggtcttccctgccttg 26690254  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  26690255 gactgaggcaccatcccctcaccctaaaatttttgtaac 26690293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 558549 - 558432
Alignment:
Q  100 cccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctca 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||||||||    
T  558549 cccgctagtgcctttggagggaggtaaatgtaattacttttgtaagtgctctttgagctagaaggtcttcccttccttggaatggggcaccatcccctca 558450  T
Q  200 ctctaaaatttttgtaac 217  Q
    | ||||||||||||||||    
T  558449 ccctaaaatttttgtaac 558432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 3200884 - 3201019
Alignment:
Q  81 agagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgga 180  Q
    |||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||| ||    
T  3200884 agagaacctggattcgagcctcgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgttctttgagcctgaagatcttctctgccttaga 3200983  T
Q  181 ctggggcaccatcccctcactctaaaatttttgtaa 216  Q
    ||||||||||||| |||| | |||||||||||||||    
T  3200984 ctggggcaccatctcctcgccctaaaatttttgtaa 3201019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 2357207 - 2357069
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||||||||||  || ||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||  |||||||||||| ||||||    
T  2357207 ccgagagaacccgggttcgagttccactagtacctttggagggaggtaaatgtaaataccattgtaaatgct-tttgagttcgaaggtcttccatgcctt 2357109  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  2357108 ggactggggcaccatcccctcaccctaaaatttttgtaac 2357069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 7860278 - 7860139
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| | ||| |||||||    
T  7860278 ccgagagaacctgggtttgagccccgctagtgcctttggagggaggtaaatgtacatacatttgtaagtgttctttgagcccgaagattttctctgcctt 7860179  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||||| |||| ||||||||| | ||||||||||||||||    
T  7860178 ggactgaggcatcatcccctctccctaaaatttttgtaac 7860139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 30372811 - 30372682
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    ||||||| || |||||||||| ||||||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||    
T  30372811 cgagagatcctgggttcgagctccgctagtgcctttggaaggaggtaaatgtaaatatctttgttagtgctctttgagcccgaaggtcttccatgccttg 30372712  T
Q  179 gactggggcaccatcccctcactctaaaat 208  Q
     ||||||| ||||| ||||||| |||||||    
T  30372711 aactggggtaccataccctcaccctaaaat 30372682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 33066592 - 33066723
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    ||||||| ||||||||||||  | |||||| |||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||| || ||||||    
T  33066592 gagagaatccgggttcgagcttcactagtgtctttggagagaggtaaatgtaaatatctttgtaagtgctctttgagcctgaaggtcttctctaccttgg 33066691  T
Q  180 actggggcaccatcccctcactctaaaatttt 211  Q
    ||||||||||||||||||||  ||||||||||    
T  33066692 actggggcaccatcccctcatcctaaaatttt 33066723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 79 - 210
Target Start/End: Complemental strand, 13047282 - 13047156
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||| |||||||||||||||||  ||  |||||||||||||||||| ||||||||||   ||||||||||||||||| ||| ||||||||||||||    
T  13047282 cgagagaatccgggttcgagccccgcatgt--ctttggagggaggtaaatataattacctt---aagtgctctttgagcccaaagatcttccctgccttg 13047188  T
Q  179 gactggggcaccatcccctcactctaaaattt 210  Q
    |||||| ||||||||||||||| |||||||||    
T  13047187 gactggagcaccatcccctcaccctaaaattt 13047156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 21487181 - 21487266
Alignment:
Q  111 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccc 196  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  21487181 ctttggagggaggtaaatgtaaatatttttgtaagtgctctttgagcccgaaagtcttccctgccttagactggggcaccatcccc 21487266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 4553666 - 4553561
Alignment:
Q  103 gctagtgcctttggagg-gaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcact 201  Q
    |||||||  |||||||| ||||||||| ||| ||| ||||||||| ||||||||| ||| |||||||| ||| ||| |||||||||||||||||||||||    
T  4553666 gctagtgtttttggaggagaggtaaatataaatacatttgtaagtactctttgagtccggaggtcttctctgtcttagactggggcaccatcccctcact 4553567  T
Q  202 ctaaaa 207  Q
    ||||||    
T  4553566 ctaaaa 4553561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 761 - 849
Target Start/End: Complemental strand, 39539079 - 39538991
Alignment:
Q  761 acagatttaagctgcattttgcacagatgaaatttgaaggactcctcatacaccacaagatgagatgagagaaggtatgagctactttc 849  Q
    ||||||| ||||||||||| |||| ||||||||| |||||||| ||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  39539079 acagattcaagctgcatttcgcacggatgaaattcgaaggactgctcctacaccacaagatgaaatgagagcaggaatgagctactttc 39538991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 2098875 - 2098825
Alignment:
Q  161 aaggtcttccctgccttggactggggcaccatcccctcactctaaaatttt 211  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2098875 aaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttt 2098825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 20961496 - 20961551
Alignment:
Q  93 ttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgc 148  Q
    ||||||| ||||||||||| |||||||||||||||||||| | | |||||||||||    
T  20961496 ttcgagctccgctagtgcccttggagggaggtaaatgtaaatccatttgtaagtgc 20961551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 8e-67; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 8400855 - 8400988
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8400855 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 8400954  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||||||||||||||||||||| ||||||||||    
T  8400955 ggactggggcaccatcccctcaccctaaaatttt 8400988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 7417798 - 7417931
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7417798 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttcactgcctt 7417897  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||||||||||||||||||||| ||||||||||    
T  7417898 ggactggggcaccatcccctcaccctaaaatttt 7417931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 50823698 - 50823837
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50823698 ccgagagaatccgggttcgagtcccgttagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 50823797  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  50823798 ggactggggcaccatcccctcaccctaaaatttttgtaac 50823837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 50852162 - 50852023
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50852162 ccgagagaatccgggttcgagtcccgttagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 50852063  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  50852062 ggactggggcaccatcccctcaccctaaaatttttgtaac 50852023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 35198765 - 35198898
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35198765 ccgagagaacccgggttcgagccccactaatgcctttgcagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 35198864  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||||| ||||||||||||||| ||||||||||    
T  35198865 ggactggagcaccatcccctcaccctaaaatttt 35198898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 79 - 211
Target Start/End: Original strand, 22855888 - 22856020
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  22855888 cgagagaacccaggttcgagccccgctagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttaagcccaaaggtcttccctgccttg 22855987  T
Q  179 gactggggcaccatcccctcactctaaaatttt 211  Q
    |||||| ||||||||||||||| ||||||||||    
T  22855988 gactggagcaccatcccctcaccctaaaatttt 22856020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 43334186 - 43334046
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  43334186 ccgagagaacccgagttcgagccccgctagtgtcttgggagggaggtaaatgtaaatacttttgtaagtgctatttgagcccgaaggtcttccctgcctt 43334087  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||| ||||||||||||| |||||| ||||||||||    
T  43334086 ggactggggtaccatcccctcaccctaaaaattttgtaacc 43334046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 52545332 - 52545454
Alignment:
Q  89 cgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggca 188  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  52545332 cgggttcgagccccgctagtgcctttaaagggaggtaaatgtaaatacttttgtaagtagtctttgagcccgaaggtcttccctgccttggactggggca 52545431  T
Q  189 ccatcccctcactctaaaatttt 211  Q
    |||||||||||| ||||||||||    
T  52545432 ccatcccctcaccctaaaatttt 52545454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 78 - 207
Target Start/End: Original strand, 34824556 - 34824685
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||| | ||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  34824556 ccgagagaacctgagttcgagtcccgttagtgcctttgaagggaggtaaatgtaattatctttgtaagtgctctttgatcccgaaggtcttcccggcctt 34824655  T
Q  178 ggactggggcaccatcccctcactctaaaa 207  Q
    ||||||||||||||||||||||| ||||||    
T  34824656 ggactggggcaccatcccctcaccctaaaa 34824685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 79 - 207
Target Start/End: Original strand, 55468000 - 55468129
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgag-cccgaaggtcttccctgcctt 177  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  55468000 cgagagaatccgggttcgagccccactaatgcgtttggagggaggtaaatgtaaatacctttgtaagtgctctttgagccccgaaggtcttctctgcctt 55468099  T
Q  178 ggactggggcaccatcccctcactctaaaa 207  Q
    ||||||||||||||||||||||| ||||||    
T  55468100 ggactggggcaccatcccctcaccctaaaa 55468129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 29635883 - 29636009
Alignment:
Q  93 ttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacc-a 191  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |    
T  29635883 ttcgagcctcgctagtgcctttgaagggaggtaaatgtaattacctttgtaagtgctctttaagcccgaatgtcttccctgccttggagtggggcaccaa 29635982  T
Q  192 tcccctcactctaaaatttttgtaacc 218  Q
    | ||||||| ||||||||| |||||||    
T  29635983 ttccctcacgctaaaatttctgtaacc 29636009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 22371832 - 22371729
Alignment:
Q  107 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||| |||||    
T  22371832 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaagatcttccctgctttagactggggcaccatcccctcaccctaaa 22371733  T
Q  207 attt 210  Q
    ||||    
T  22371732 attt 22371729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 37330692 - 37330606
Alignment:
Q  125 aaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttt 211  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37330692 aaatgtaattacctttgtaagtgctctttgagtccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttt 37330606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 19872593 - 19872476
Alignment:
Q  100 cccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctca 199  Q
    |||||| ||||||||||||| |||||||  ||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  19872593 cccgcttgtgcctttggaggaaggtaaaattaattacctttgtaagtactctttgaatccgaaggtcttccctgtcttggactggggcaccatcccctca 19872494  T
Q  200 ctctaaaatttttgtaac 217  Q
      ||||||||||| ||||    
T  19872493 tcctaaaatttttataac 19872476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 30534987 - 30534902
Alignment:
Q  125 aaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaattt 210  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||    
T  30534987 aaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttggactggggtaccatcccctcaccctaaaattt 30534902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 48078072 - 48077977
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgc 174  Q
    ||||||||| |||||||||||| | |||||||||||||||| |||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  48078072 cgagagaactcgggttcgagcctcactagtgcctttggaggaaggtaaatgtaaatatctttgtaagtgctctttgagcctgaaggtcttccctgc 48077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 37454829 - 37454743
Alignment:
Q  125 aaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttt 211  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||||    
T  37454829 aaatataattacctttgtaagtgctctttgagcccgaaggtcttccctaccttagattggggcaccatcccctcaccctaaaatttt 37454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 25910738 - 25910658
Alignment:
Q  138 tttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  25910738 tttgtaagtgctctttgagtccgaagatcttccctgccttggactgaggcaccatcccctcaccctaaaatttttgtaacc 25910658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 50726129 - 50725989
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||  ||||||||||||||| ||||| ||||||||| |||||||| ||||||| ||||||||| || ||||||  |||| ||||||||| | ||    
T  50726129 ccgagagaattcgggttcgagccccgttagtgtctttggaggaaggtaaatataattacttttgtaagttctttttgagttcgaaagtcttccctacttt 50726030  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||| |||||||||||||| |||| ||| || ||||||||||    
T  50726029 ggattggggcaccatcccttcaccctacaaattttgtaacc 50725989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 50786719 - 50786859
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||  ||||||||||||||| ||||| ||||||||| |||||||| ||||||| ||||||||| || ||||||  |||| ||||||||| | ||    
T  50786719 ccgagagaattcgggttcgagccccgttagtgtctttggaggaaggtaaatataattacttttgtaagttctttttgagttcgaaagtcttccctacttt 50786818  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||| |||||||||||||| |||| ||| || ||||||||||    
T  50786819 ggattggggcaccatcccttcaccctacaaattttgtaacc 50786859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 42876229 - 42876355
Alignment:
Q  92 gttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacca 191  Q
    ||||||||||  |||||| |||| || ||||||||||||||||||||||||||||||||||||| |  ||| |||||||||  |||||||| ||||||||    
T  42876229 gttcgagcccgactagtgtctttagatggaggtaaatgtaattacctttgtaagtgctctttgaacttgaatgtcttccctatcttggactagggcacca 42876328  T
Q  192 tcccctcactctaaaatttttgtaacc 218  Q
    ||| ||||| ||||| ||| |||||||    
T  42876329 tcctctcaccctaaattttctgtaacc 42876355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 30203744 - 30203652
Alignment:
Q  117 agggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaattttt 212  Q
    ||||||||||||||||  |||||||||| || ||||||||| ||||||| |||| || |||| |||||||||||||||||||||||||||| ||||    
T  30203744 agggaggtaaatgtaa--acctttgtaaatgttctttgagctcgaaggttttcc-tgtcttgaactggggcaccatcccctcactctaaaaatttt 30203652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 25589253 - 25589347
Alignment:
Q  110 cctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatt 209  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||| ||||       ||||||||||||| |||||||| ||||||||| ||||||||    
T  25589253 cctttggaaggaggtaaatgtaaataccttagtaagtgctctttgagtccga-------ccctgccttggacgggggcaccctcccctcaccctaaaatt 25589345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 773666 - 773717
Alignment:
Q  167 ttccctgccttggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  773666 ttcccttccttggactggggcaccatcccctcaccctagaatttttgtaacc 773717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 39438903 - 39438821
Alignment:
Q  135 acctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||| ||||| |  || || ||||| ||| ||||| ||||||||||||| ||||||| |||||||||||||||||    
T  39438903 acctttgtaagtgttctttaaatccaaaagtctttcctaccttgaactggggcaccat-ccctcaccctaaaatttttgtaacc 39438821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 31297574 - 31297529
Alignment:
Q  160 gaaggtcttccctgccttggactggggcaccatcccctcactctaa 205  Q
    ||||||||||| ||||||||||||||| ||||| ||||||| ||||    
T  31297574 gaaggtcttccttgccttggactggggaaccatgccctcaccctaa 31297529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 3e-66; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 19723311 - 19723451
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  19723311 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccaaagatcttccctgcctt 19723410  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  19723411 ggactggggcaccatcccctcaccctaaaatttttgtaacc 19723451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 79 - 218
Target Start/End: Original strand, 11404002 - 11404141
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11404002 cgagagaacctgggttcgagcctcgctagtgtctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 11404101  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  11404102 gactggggcaccatcccctcaccctaaaatttttgtaacc 11404141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 4840140 - 4840279
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |||||||||||||||||    
T  4840140 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtcattaccattgtaagtgctctttgagtccaaaggtcttccctgcctt 4840239  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||| ||||||||||||||||| ||||||||| ||||||    
T  4840240 ggactagggcaccatcccctcaccctaaaatttctgtaac 4840279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 80 - 218
Target Start/End: Original strand, 29767190 - 29767326
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29767190 gagagaacccggggtcgagccccgctagtgcctttgaagggaggtaaat--aattacctttgtaagtgttctttgagcccgaaggtcttccctgccttgg 29767287  T
Q  180 actggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  29767288 actggggcaccatcccctcaccctaaaatttttgtaacc 29767326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 80 - 211
Target Start/End: Complemental strand, 32296769 - 32296638
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32296769 gagagaacccgggttcaagccctgctagtgcctttgaagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 32296670  T
Q  180 actggggcaccatcccctcactctaaaatttt 211  Q
    | ||||||||||||||||||| ||||||||||    
T  32296669 attggggcaccatcccctcaccctaaaatttt 32296638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 17095568 - 17095679
Alignment:
Q  96 gagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatccc 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17095568 gagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatccc 17095667  T
Q  196 ctcactctaaaa 207  Q
    ||||| ||||||    
T  17095668 ctcaccctaaaa 17095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 22711509 - 22711648
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||| |||||| ||| ||  ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  22711509 ccgagagaactcgggtttgagtccaactaatgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccttgcctt 22711608  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  22711609 ggactggggcaccatcccctcatcctaaaatttttgtaac 22711648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 28739690 - 28739554
Alignment:
Q  81 agagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgga 180  Q
    |||||||| |||||| |||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  28739690 agagaacctgggttcaagccccactagtgcctttggaggaaagtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctaccttgga 28739591  T
Q  181 ctggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||  ||||||||||||||| |||||| |||||||||    
T  28739590 ctgcagcaccatcccctcaccctaaaaattttgtaac 28739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 36261679 - 36261785
Alignment:
Q  111 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaattt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||    
T  36261679 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttgaactggggcaccatcccctcaccttaaaattt 36261778  T
Q  211 ttgtaac 217  Q
    |||||||    
T  36261779 ttgtaac 36261785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 79 - 218
Target Start/End: Original strand, 41553286 - 41553425
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||||||| ||||||| ||| ||| || ||||||||| | |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||     
T  41553286 cgagagaacccgagttcgagtcccactaatgtctttggaggaacgtaaatgtaaatacctttgtaagtgttctttgagctcgaaggtcttccctgcctta 41553385  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  41553386 gactggagcaccatcccctcaccctaaaatttttgtaacc 41553425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 21355087 - 21355004
Alignment:
Q  107 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacc 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21355087 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaaggtcttccctgccttggactggggcacc 21355004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 11610280 - 11610418
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||| | ||| |||||||| |||||||||||||||||  |||||||| ||| || ||||||||||||| ||| |||||||||||||| | |  |||    
T  11610280 ccgagagatctcggattcgagcctcgctagtgcctttggagaaaggtaaatataaatatctttgtaagtgctgtttaagcccgaaggtcttacttatctt 11610379  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaa 216  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  11610380 ggactggggcaccatcccctcaccctaaaatttttgtaa 11610418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 11909509 - 11909415
Alignment:
Q  124 taaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  11909509 taaatgtaaatacctttctaagtgctctttgagctcgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaaattttgtaacc 11909415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 30682842 - 30682971
Alignment:
Q  81 agagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgga 180  Q
    ||||| |||| ||||||||||| || |||||||||||| ||| ||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  30682842 agagagcccgtgttcgagccccactggtgcctttggagagagataaatgtaaatacttttgtaagtgttctttgagcccgaagatcttccctgccttgga 30682941  T
Q  181 ctggggcaccatcccctcactctaaaatttt 211  Q
    || |||||||||||||||||  |||||||||    
T  30682942 ct-gggcaccatcccctcaccttaaaatttt 30682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 43288105 - 43288206
Alignment:
Q  111 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaattt 210  Q
    |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||    
T  43288105 ctttggagggaggtaaatgtaattacctttgtaattgatttttgagtccgaaggtcttccctgccttggactggagcaccatcccctcaccctaaatttt 43288204  T
Q  211 tt 212  Q
    ||    
T  43288205 tt 43288206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 24475113 - 24475029
Alignment:
Q  93 ttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  24475113 ttcgagctccgctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgttctttgagcccgaaggtctttcctgcctt 24475029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 27881118 - 27881044
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttg 154  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  27881118 gagagaacccgggttcgagccccgctagtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttg 27881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 28021299 - 28021225
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttg 154  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  28021299 gagagaacccgggttcgagccccgctagtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttg 28021225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 27879620 - 27879553
Alignment:
Q  150 ctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  27879620 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaatttttgtaac 27879553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 28019801 - 28019734
Alignment:
Q  150 ctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  28019801 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaatttttgtaac 28019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 44742038 - 44741914
Alignment:
Q  90 gggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcac 189  Q
    ||||||||||| ||||||||||||||||| || || ||| | | | |||||||||||||||    || || | |||||| |||||||||||||||||  |    
T  44742038 gggttcgagcctcgctagtgcctttggagagaagttaatattaatccctttgtaagtgctcca--agtcctatggtcttacctgccttggactggggtgc 44741941  T
Q  190 catcccctcactctaaaatttttgtaac 217  Q
    ||||||||||| || |||||||||||||    
T  44741940 catcccctcaccct-aaatttttgtaac 44741914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 8e-64; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 17064323 - 17064463
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  17064323 ccgagagaacccgggttcgagcctcgctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttaagcccgaaggtcttccctgcctt 17064422  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17064423 ggactggggcaccatcccctcaccctaaaatttttgtaacc 17064463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 20983132 - 20983001
Alignment:
Q  81 agagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgga 180  Q
    |||||| |||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  20983132 agagaatccgggttcgagccccgctagtgccttcggagagaggtaaatgcaattacatttgtaagtgctctttgagcccgaaagtcttccctgccttgga 20983033  T
Q  181 ctggggcaccatcccctcactctaaaattttt 212  Q
    |||||||||||||||||||| |||||| ||||    
T  20983032 ctggggcaccatcccctcaccctaaaaatttt 20983001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 78 - 211
Target Start/End: Original strand, 37976546 - 37976683
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaat----gtaattacctttgtaagtgctctttgagcccgaaggtcttccctg 173  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||    |||| |||||||||||||||| ||||||||||||||| || ||||    
T  37976546 ccgagagaacctgggttcgagccccgctagtgcatttgaagggaggtaaattaatgtaaatacctttgtaagtgctatttgagcccgaaggtttttcctg 37976645  T
Q  174 ccttggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  37976646 ccttgaactggggcaccatcccctcaccctaaaatttt 37976683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 41910865 - 41910957
Alignment:
Q  119 ggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||| |||||||||||||||||||||  |||||||||    
T  41910865 ggaggtaaatgtaattaactttgtaagtgttctttgagcccgaatgtcttctctgccttgaactggggcaccatcccctcaccttaaaatttt 41910957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 31673863 - 31673956
Alignment:
Q  111 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaa 205  Q
    |||||||| |||| |||||||| | |||||| |||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||    
T  31673863 ctttggagagaggaaaatgtaaatccctttg-aagtgccctttgagccctaaggtcctccctgccttggactggggcaccaacccctcaccctaa 31673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 5009531 - 5009416
Alignment:
Q  95 cgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcc 194  Q
    ||||||||| ||||| |||||||| ||| ||||||||| ||  ||||||| || |||||||  ||||||||||||| ||||||| ||||| ||| |||||    
T  5009531 cgagccccgttagtgtctttggagagagataaatgtaaatatttttgtaaatgttctttgaatccgaaggtcttccatgccttgaactggtgcatcatcc 5009432  T
Q  195 cctcactctaaaatttt 211  Q
    || ||| ||||||||||    
T  5009431 cc-caccctaaaatttt 5009416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 35237102 - 35237052
Alignment:
Q  167 ttccctgccttggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  35237102 ttccctgccttggactgaggcaccatcccctcactctaaaatttctgtaac 35237052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 39162977 - 39162859
Alignment:
Q  88 ccgggttcgagccccgctagtgcctttggaggg---aggtaaatgtaattacctt-tgtaagtgctctttgagcccgaaggtcttccctgccttggactg 183  Q
    ||||||||||||||  |||||||| |||||||    |||||||||||| |||||| ||||| |||||||||||||    |||||||  ||||||||||||    
T  39162977 ccgggttcgagcccaactagtgcccttggaggaggaaggtaaatgtaaataccttgtgtaaatgctctttgagcc----ggtcttctgtgccttggactg 39162882  T
Q  184 gggcaccatcccctcactctaaa 206  Q
    ||||||| |||| |||| |||||    
T  39162881 gggcaccgtcccatcaccctaaa 39162859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 35237154 - 35237103
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgt 130  Q
    |||||||| | || ||||||||||||||||| ||||| ||||||||||||||    
T  35237154 cgagagaatctggattcgagccccgctagtgtctttgaagggaggtaaatgt 35237103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 18303409 - 18303352
Alignment:
Q  111 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 168  Q
    ||||||||| | ||||| |||| ||| |||||||||||||||| | ||||||||||||    
T  18303409 ctttggaggaaagtaaacgtaaatacttttgtaagtgctctttaaacccgaaggtctt 18303352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 5e-62; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 78 - 207
Target Start/End: Complemental strand, 30054574 - 30054445
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30054574 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaaatgctctttgagcccgaaggtcttccctgcctt 30054475  T
Q  178 ggactggggcaccatcccctcactctaaaa 207  Q
    ||||||||||||||||||||||| ||||||    
T  30054474 ggactggggcaccatcccctcaccctaaaa 30054445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 20014458 - 20014597
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  20014458 ccgagagaacccgggttcgagtcccgctagtacctttggagggaggtaaatgtaattacatttgtaaatgctctttgagcctgaaggtcttccctgcctt 20014557  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  20014558 ggactgaggcaccatcccctcaccctaaaatttttgtaac 20014597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 79 - 218
Target Start/End: Complemental strand, 30370191 - 30370052
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30370191 cgagagaatccgggttcgagccccactagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 30370092  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||  |||||||  |||||||    
T  30370091 gactggggcaccatcccctcaccttaaaattcatgtaacc 30370052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 45324006 - 45324146
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||    
T  45324006 ccgagagaacctgggttccagccccgctagtgcttttggagggaggtaaatgtaaatacctttgtaagtgctccttgagcccgaaggtcttccctgcttt 45324105  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||| |||||||||||| ||||    
T  45324106 ggactggggcaccatcccctcaccctaaaatttttgcaacc 45324146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 79 - 218
Target Start/End: Original strand, 12025182 - 12025321
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  12025182 cgagagaacctgggttcgagccccattagtgcctttggaggaaggtaaatgtaattacctttgtaagtactatttgagcccgaaggtcttccctgccttg 12025281  T
Q  179 gactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  12025282 gactggggcaccaccccctcaccctaaaatttttgtaacc 12025321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 79 - 207
Target Start/End: Original strand, 21090116 - 21090244
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  21090116 cgagagaattcgggttcgagccccgctagtgccgttggagggaggtaaatgtaaatacatttgtaaatgctctttgagcccgaaggtcttccctgccttg 21090215  T
Q  179 gactggggcaccatcccctcactctaaaa 207  Q
    |||||||||||||||||||||||||||||    
T  21090216 gactggggcaccatcccctcactctaaaa 21090244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 22024121 - 22024242
Alignment:
Q  96 gagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatccc 195  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22024121 gagccctgctagtgcctttggatggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttctctgccttggactggggcaccatccc 22024220  T
Q  196 ctcactctaaaatttttgtaac 217  Q
    ||||| ||||||||| ||||||    
T  22024221 ctcaccctaaaatttatgtaac 22024242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 4573379 - 4573517
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  ||    
T  4573379 ccgagagaacccgggttcgagccccactaatgtctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgtttt 4573478  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaa 216  Q
    |||||| ||||| |||||||||| |||||||||||||||    
T  4573479 ggactgaggcactatcccctcaccctaaaatttttgtaa 4573517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 78 - 209
Target Start/End: Complemental strand, 30850972 - 30850841
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| |||| |||    
T  30850972 ccgagagaactcgggttcgagccccgttagtgtctttggagggaggtaaatataattgcctttgtaagtgctctttgaacccgaaggtctttcctgtctt 30850873  T
Q  178 ggactggggcaccatcccctcactctaaaatt 209  Q
    ||||||||||||||||||||||| ||||||||    
T  30850872 ggactggggcaccatcccctcaccctaaaatt 30850841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 14498182 - 14498072
Alignment:
Q  107 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||    
T  14498182 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagaccaaaggtcttccctgccttggactggggcgccatcccctcaccctaaa 14498083  T
Q  207 atttttgtaac 217  Q
    |||||||||||    
T  14498082 atttttgtaac 14498072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 33763373 - 33763246
Alignment:
Q  91 ggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacc 190  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||| || |||||||||||| ||||||||| |    
T  33763373 ggttcgagccccgctagtgcctttagagggaggcaaatgtaattacctttgtaagtgttttttgagcccgaaagttttccctgccttgaactggggcatc 33763274  T
Q  191 atcccctcactctaaaatttttgtaacc 218  Q
    |||||||||| ||||||||| |||||||    
T  33763273 atcccctcaccctaaaatttctgtaacc 33763246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 33762646 - 33762532
Alignment:
Q  104 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactct 203  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||||||| ||||||||||| ||    
T  33762646 ctagtgcctttagagggaggcaaatgtaattacctttgtaagtgttttttgagcccgaaagttttccctgccttggactggggcatcatcccctcaccct 33762547  T
Q  204 aaaatttttgtaacc 218  Q
    |||||||||||||||    
T  33762546 aaaatttttgtaacc 33762532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 35371833 - 35371755
Alignment:
Q  122 ggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcac 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35371833 ggtaaatgtaattacctttgtaagtgctctttgagcccgaagttcttccctgccttggactggggcaccatcccctcac 35371755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 90 - 198
Target Start/End: Complemental strand, 44438670 - 44438562
Alignment:
Q  90 gggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcac 189  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||| ||||| |   |||||||||||||||||||| ||||||| ||    
T  44438670 gggttcgagctccgctaatgcctttggagggaggtaaatgtaattacttttgtaagtgttctttaaattcgaaggtcttccctgccttgaactggggtac 44438571  T
Q  190 catcccctc 198  Q
    |||||||||    
T  44438570 catcccctc 44438562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 35618034 - 35618115
Alignment:
Q  137 ctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| |||||| ||||||||||    
T  35618034 ctttgtaagtgctctttgagcccgaaggtcttccttgctttggactggggtaccatcccctcaccctaaaaattttgtaacc 35618115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 17015192 - 17015260
Alignment:
Q  150 ctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||    
T  17015192 ctttgagcccgaaggtcttccctgctttggactggggcaccatcccctcatcctaaaatttatgtaacc 17015260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 15034455 - 15034501
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggt 124  Q
    |||| ||||||| |||||||||||  |||||||||||||||||||||    
T  15034455 ccgaaagaacccaggttcgagccctactagtgcctttggagggaggt 15034501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 2e-61; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 46494530 - 46494390
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  46494530 ccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctacctt 46494431  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaacc 218  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  46494430 ggactggggcaccatcccctcaccctaaaaattttgtaacc 46494390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 51066493 - 51066632
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51066493 ccgagagaactcgggttcgagctccgctagtgcctttggagggaggtaaatataattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 51066592  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| ||||||  ||||||||    
T  51066593 ggactggggcaccatcccctcaccctaaaaaatttgtaac 51066632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 79 - 210
Target Start/End: Original strand, 36192542 - 36192673
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  36192542 cgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaattacttttgtaaatgctctttgagcccgaaggtcttccctaccttg 36192641  T
Q  179 gactggggcaccatcccctcactctaaaattt 210  Q
    |||||||||||||||||||||| |||||||||    
T  36192642 gactggggcaccatcccctcaccctaaaattt 36192673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 51714097 - 51713958
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  51714097 ccgagagaacccgggttcgagccccactagtgcctttgaagggaggtaaatataaatacctttgtaagtgctctttgagcccgaaggtcttccctgcttt 51713998  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    | ||||||||||||||||||||| ||||||||||||||||    
T  51713997 gaactggggcaccatcccctcaccctaaaatttttgtaac 51713958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 32139164 - 32139303
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||    
T  32139164 ccgagagaacctgggttcgaaccccgctagtgtctttggagggaggtaaatgtaattacctttgtaagtgttctttgagcctgaaggtcttctctgcctt 32139263  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||||||||||||||||| |||| ||||| ||||| ||||    
T  32139264 ggactggggcaccatcccttcaccctaaattttttataac 32139303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 7173717 - 7173584
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||  ||||| || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||    
T  7173717 ccgagagaacctaggttcaagacccgctagtgcctttggaaggaggtaaatgtcaatacctttgtaagtgctctttgagcccgaaggtcttccctgcgtt 7173618  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||||||||||||||||||||| ||||||||||    
T  7173617 ggactggggcaccatcccctcaccctaaaatttt 7173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 30970516 - 30970383
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||| ||||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  30970516 ccgagagaatccgggttcgagcctcactagtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctacctt 30970417  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
     |||||||||||||||||||||| ||||||||||    
T  30970416 agactggggcaccatcccctcaccctaaaatttt 30970383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 50905748 - 50905887
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||    
T  50905748 ccgagagaatctgggttcgagccccgctagtgcctttggagagaggtaaatgtaattatctttgtaggtgctctttgagtccgaaggtcttccatgcctt 50905847  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    | |||||||||||||||  |||| ||||||||||||||||    
T  50905848 gaactggggcaccatcctttcaccctaaaatttttgtaac 50905887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 39863910 - 39863777
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| || ||||    
T  39863910 ccgagagaacccgggttcggaccccgctagtgcctttggagggaagtaaatgtaattacctttgtaagtgctctttgaacccgaaggtcttctctacctt 39863811  T
Q  178 ggactggggcaccatcccctcactctaaaatttt 211  Q
    |||||| | ||| |||||||||| ||||||||||    
T  39863810 ggactgagacactatcccctcaccctaaaatttt 39863777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 8740448 - 8740550
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  8740448 ccgagagatcccgggttcgagccccgctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccatgcctt 8740547  T
Q  178 gga 180  Q
    |||    
T  8740548 gga 8740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 29576444 - 29576554
Alignment:
Q  107 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaa 206  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  29576444 gtgcctttggagggaggtaaatgtaaataactttgtaagtgctctttgagcccgaaggtcttccctgccttggattggggcaccaccccctcaccctaaa 29576543  T
Q  207 atttttgtaac 217  Q
    |||||||||||    
T  29576544 atttttgtaac 29576554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 55231715 - 55231827
Alignment:
Q  106 agtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaa 205  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  55231715 agtgcctttgaagggaggtaaatgtaaatacttttgtaagtgctctttgagcctgaatgtcttccctgccttggactggggcaccatcccctcaccctaa 55231814  T
Q  206 aatttttgtaacc 218  Q
    |||||||||||||    
T  55231815 aatttttgtaacc 55231827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 2570216 - 2570341
Alignment:
Q  93 ttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccat 192  Q
    ||||||| ||||| |||||||||||||||||||||| ||| || | || ||| || |||||||| |||||| ||||||||||||||||||||||||||||    
T  2570216 ttcgagctccgctggtgcctttggagggaggtaaatataaatatcattataaatgttctttgagtccgaagatcttccctgccttggactggggcaccat 2570315  T
Q  193 cccctcactctaaaatttttgtaacc 218  Q
    |||||||| |||||||||||||||||    
T  2570316 cccctcaccctaaaatttttgtaacc 2570341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 47627127 - 47626986
Alignment:
Q  78 ccgagagaacccgggttcgag--ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcc 175  Q
    |||||||||||||| ||||||  |||| |||||||||||| |||||||||||||||| ||||| | ||| | |||||||| | |||||||||||||||||    
T  47627127 ccgagagaacccggattcgagagccccactagtgcctttgaagggaggtaaatgtaaatacctctataaatactctttgaactcgaaggtcttccctgcc 47627028  T
Q  176 ttggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||||||||  ||||||| |||||| ||||||||||||||||    
T  47627027 ttggactggaacaccatctcctcaccctaaaatttttgtaac 47626986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 676766 - 676867
Alignment:
Q  116 gagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgta 215  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||  |||||||||||||    
T  676766 gagggaggtaagtgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactgtaacaccatccccttaccttaaaatttttgta 676865  T
Q  216 ac 217  Q
    ||    
T  676866 ac 676867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 22304167 - 22304090
Alignment:
Q  134 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttt 211  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  22304167 tacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactggggcaccatcctctcaccctaaaatttt 22304090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 41523423 - 41523536
Alignment:
Q  104 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactct 203  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||  |||||| |||| ||||||||| |||  ||    
T  41523423 ctagtgtctttggagggaggtaaatgtaaatacctttataagtgctctttgagctcgaaggtcttccctatcttggattgggacaccatcccttcatcct 41523522  T
Q  204 aaaatttttgtaac 217  Q
    |||| |||||||||    
T  41523523 aaaaattttgtaac 41523536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 79 - 207
Target Start/End: Complemental strand, 2294841 - 2294719
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    ||||||||| ||||||||||   |||||||||||||||||| ||||||||||||||||      ||||| || ||||||||||| |||||| |||||||     
T  2294841 cgagagaactcgggttcgagtttcgctagtgcctttggaggaaggtaaatgtaattac------aagtgttcgttgagcccgaaagtcttcactgcctta 2294748  T
Q  179 gactggggcaccatcccctcactctaaaa 207  Q
    |||||||||||||||||||||| ||||||    
T  2294747 gactggggcaccatcccctcaccctaaaa 2294719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 4080651 - 4080544
Alignment:
Q  111 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaattt 210  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| | ||| |||||| ||| |||||| ||| ||||||||||||| |  ||||||||    
T  4080651 ctttggagggaggtaaatgtaattacatttgtaaatgctctttgagtctgaatgtcttctctgtcttggattggagcaccatcccctcgccttaaaattt 4080552  T
Q  211 ttgtaacc 218  Q
    ||||||||    
T  4080551 ttgtaacc 4080544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 50399763 - 50399634
Alignment:
Q  89 cgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggca 188  Q
    ||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||| ||||||||||  || |||||| || |||||||   |||||    
T  50399763 cgggttcgagccccgctagtgctcttggaggaaggtaaatgtaaatacctttgtaagtgttctttgagcctaaatgtcttctctaccttggataagggca 50399664  T
Q  189 ccatcccctcactctaaaatttttgtaacc 218  Q
     ||||| ||||| ||||| ||| |||||||    
T  50399663 tcatccgctcaccctaaattttatgtaacc 50399634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 51279154 - 51279035
Alignment:
Q  89 cgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggca 188  Q
    |||||| ||||||  ||| ||| ||| ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||  ||||||| |  ||||    
T  51279154 cgggtttgagccctactaatgcttttagagggaggtcaatgtaaatacttttgtaagtgctctttgagcccaaaggtcttcccaaccttggattaaggca 51279055  T
Q  189 ccatcccctcactctaaaat 208  Q
    |||||||||||| |||||||    
T  51279054 ccatcccctcaccctaaaat 51279035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 762 - 856
Target Start/End: Complemental strand, 30909583 - 30909489
Alignment:
Q  762 cagatttaagctgcattttgcacagatgaaatttgaaggactcctcatacaccacaagatgagatgagagaaggtatgagctactttcctgagac 856  Q
    |||||| ||||||||||| |||||||||||||| |||| ||||||| |||||||||||| || ||||| | ||| ||||||||||||| ||||||    
T  30909583 cagattcaagctgcatttcgcacagatgaaattcgaagaactcctcctacaccacaagacgaaatgagggcaggaatgagctactttcatgagac 30909489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 22423378 - 22423479
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    |||||| | ||| ||||||||| | |||| ||||||||||||||||||||||| ||| |||||||||| |||||| |  |||||||||||||||| ||||    
T  22423378 gagagatctcggattcgagcccggttagtacctttggagggaggtaaatgtaaatacttttgtaagtgttctttgtgttcgaaggtcttccctgctttgg 22423477  T
Q  180 ac 181  Q
    ||    
T  22423478 ac 22423479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 23084530 - 23084459
Alignment:
Q  145 gtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaatttttgtaa 216  Q
    |||||||||||| ||||||||||||||| ||||| ||||||| |||||| |||||| |||||| ||||||||    
T  23084530 gtgctctttgagtccgaaggtcttccctaccttgaactggggtaccatctcctcaccctaaaaattttgtaa 23084459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 37990663 - 37990606
Alignment:
Q  142 taagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctca 199  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||| ||||||    
T  37990663 taagtactctttgagcctgaagatcttccctaccttggactggggcaccattccctca 37990606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 40012548 - 40012646
Alignment:
Q  113 ttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaattttt 212  Q
    |||||||||||||||||||| | ||||||| ||||||| ||||| |  |||||||||||| | ||||||| || |||| ||| ||||| ||||| |||||    
T  40012548 ttggagggaggtaaatgtaaatccctttgtgagtgctc-ttgagtcataaggtcttccctacgttggactaggacaccgtcctctcacactaaatttttt 40012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 51066240 - 51066283
Alignment:
Q  164 gtcttccctgccttggactggggcaccatcccctcactctaaaa 207  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||    
T  51066240 gtcttccctgccttgaactggggcaccatcccctcaccctaaaa 51066283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 8e-61; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 35163882 - 35163743
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35163882 ccgagagaaccagggttcgagccccactaatgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 35163783  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  35163782 ggactggggcaccatcccctcaccctaaaatttttgtaac 35163743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 20685346 - 20685465
Alignment:
Q  99 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20685346 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccttc 20685445  T
Q  199 actctaaaatttttgtaacc 218  Q
    || |||||||||||||||||    
T  20685446 accctaaaatttttgtaacc 20685465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 19686957 - 19686820
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |    
T  19686957 gagagaacctgggttcgagcccctctagtgcctttgtagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatctttcctcccttag 19686858  T
Q  180 actggggcaccatcccctcactctaaaatttttgtaac 217  Q
    ||||||||| ||||||||||| ||||||||| ||||||    
T  19686857 actggggcatcatcccctcaccctaaaatttctgtaac 19686820  T

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Target: chr6; HSP #4
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 2711866 - 2711733
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||| |||||| || |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  2711866 ccgatagaacctggattcgagccccactagtgcttttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgcctt 2711767  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaac 217  Q
    |||      |||||||||||||| ||||||||||||||||    
T  2711766 gga------caccatcccctcaccctaaaatttttgtaac 2711733  T

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Target: chr6; HSP #5
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 17948702 - 17948814
Alignment:
Q  100 cccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctca 199  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  17948702 cccgctagtgtctttggagagaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactgggacaccatcccctca 17948801  T
Q  200 ctctaaaattttt 212  Q
    |  ||||||||||    
T  17948802 ccttaaaattttt 17948814  T

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Target: chr6; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 14505655 - 14505519
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 177  Q
    |||||||| ||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  |||||| || ||||| |||||| ||||||    
T  14505655 ccgagagatcccgaattcgagccccgctagtgcttttggagggaggtaaatgtaa-tacctttgtaaatattctttgggcgcgaagatcttccgtgcctt 14505557  T
Q  178 ggactggggcaccatcccctcactctaaaatttttgtaa 216  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14505556 ggactggggcaccatcccctcac-ctaaaatttttgtaa 14505519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 15070152 - 15070247
Alignment:
Q  105 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcac 200  Q
    |||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15070152 tagtgcctttggagggaggtaaatataattacatttgtaagtgttcattgagcccgaaggtcttccctgccttagactggggcaccatcccctcac 15070247  T

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Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 14496352 - 14496406
Alignment:
Q  78 ccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaa 132  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14496352 ccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaa 14496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 24336640 - 24336718
Alignment:
Q  103 gctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggac 181  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||| | |||||||| |||| |||||||||||||||||    
T  24336640 gctagtccctttggagggaggtaaatgtaaatacttttgtaagtgttttttgagcctgaagatcttccctgccttggac 24336718  T

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Target: scaffold0021 (Bit Score: 117; Significance: 5e-59; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 107822 - 107691
Alignment:
Q  79 cgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 178  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  107822 cgagagaacccgagttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctaccctgccttg 107723  T
Q  179 gactggggcaccatcccctcactctaaaatttt 211  Q
    |||||||||||||||||||||| ||||||||||    
T  107722 gactggggcaccatcccctcac-ctaaaatttt 107691  T

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Target: scaffold0691 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 7099 - 6994
Alignment:
Q  80 gagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 179  Q
    ||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||    
T  7099 gagagaatccgggttcgagtcccgctagtgcgtttggagggaagtaaatgtaattacctttgcaagtgttctttgagtccgaaggtcttccctaccttgg 7000  T
Q  180 actggg 185  Q
    ||||||    
T  6999 actggg 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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