View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5014-Insertion-7 (Length: 259)
Name: NF5014-Insertion-7
Description: NF5014
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5014-Insertion-7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 7 - 259
Target Start/End: Complemental strand, 5820192 - 5819940
Alignment:
| Q |
7 |
aaagaatgcctcaacgtattttagaaagtattatagttataagaatttccttcaactattttaattcaaaggtaattgttttattttatttttcaaatag |
106 |
Q |
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| T |
5820192 |
aaagaatgcctcaacgtattttagaaagtattatagttataagaatttccttcaactattttaattcaaaggtaattgttttattttatttttcaaatag |
5820093 |
T |
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| Q |
107 |
gaactaaccattgattaagagcactctaagtagacaactattataaaagaaataactcatatatgctcccctttgtgagcaacacaatctttcttcattc |
206 |
Q |
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| T |
5820092 |
gaactaaccattgattaagagcactctaagtagacaactattataaaagaaataactcatatatgctcccctttgtgagcaacacaatctttcttcattc |
5819993 |
T |
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| Q |
207 |
ccttacctcattttcccttcctcttttataaatcaacacaaatctcctccatc |
259 |
Q |
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| T |
5819992 |
ccttacctcattttcccttcctcttttataaatcaacacaaatctcctccatc |
5819940 |
T |
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