View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5015-Insertion-15 (Length: 118)

Name: NF5015-Insertion-15
Description: NF5015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5015-Insertion-15
NF5015-Insertion-15
[»] chr4 (50 HSPs)
chr4 (8-118)||(4608680-4608790)
chr4 (80-114)||(4505831-4505865)
chr4 (84-118)||(33389900-33389934)
chr4 (80-118)||(47683476-47683514)
chr4 (80-112)||(28511722-28511754)
chr4 (80-112)||(28513521-28513553)
chr4 (80-115)||(52635955-52635990)
chr4 (80-114)||(1237541-1237575)
chr4 (80-118)||(20004779-20004817)
chr4 (88-118)||(22160396-22160426)
chr4 (88-118)||(23315945-23315975)
chr4 (80-118)||(48458464-48458502)
chr4 (80-118)||(54055336-54055374)
chr4 (80-113)||(20681020-20681053)
chr4 (80-113)||(23628113-23628146)
chr4 (80-109)||(25881839-25881868)
chr4 (80-113)||(27746684-27746717)
chr4 (80-113)||(35519437-35519470)
chr4 (80-112)||(742956-742988)
chr4 (82-114)||(4088088-4088120)
chr4 (80-112)||(6028628-6028660)
chr4 (80-112)||(8151027-8151059)
chr4 (80-112)||(9097956-9097988)
chr4 (80-112)||(10262460-10262492)
chr4 (80-112)||(11180730-11180762)
chr4 (80-112)||(13860144-13860176)
chr4 (80-112)||(15518427-15518459)
chr4 (80-112)||(17976270-17976302)
chr4 (85-113)||(19587493-19587521)
chr4 (80-112)||(21561963-21561995)
chr4 (80-112)||(24080531-24080563)
chr4 (80-112)||(26097870-26097902)
chr4 (80-112)||(28361712-28361744)
chr4 (80-112)||(32137868-32137900)
chr4 (80-112)||(32201173-32201205)
chr4 (80-112)||(34664673-34664705)
chr4 (80-112)||(39651558-39651590)
chr4 (80-112)||(39657536-39657568)
chr4 (80-112)||(40664852-40664884)
chr4 (80-112)||(41986740-41986772)
chr4 (80-112)||(43329484-43329516)
chr4 (80-112)||(44856004-44856036)
chr4 (80-112)||(46046014-46046046)
chr4 (80-112)||(51153306-51153338)
chr4 (80-112)||(51187486-51187518)
chr4 (80-112)||(51449550-51449582)
chr4 (80-115)||(2684265-2684300)
chr4 (80-111)||(3240107-3240138)
chr4 (79-114)||(26877689-26877724)
chr4 (85-112)||(26927405-26927432)
[»] chr7 (35 HSPs)
chr7 (80-118)||(28069671-28069709)
chr7 (82-118)||(24650005-24650041)
chr7 (80-118)||(38237484-38237522)
chr7 (80-117)||(27425680-27425717)
chr7 (80-112)||(20135582-20135614)
chr7 (79-115)||(32358884-32358920)
chr7 (79-118)||(36925327-36925366)
chr7 (80-114)||(1292086-1292120)
chr7 (88-118)||(5096508-5096538)
chr7 (80-118)||(7606279-7606317)
chr7 (80-114)||(35338384-35338418)
chr7 (80-118)||(39959409-39959447)
chr7 (80-114)||(47439806-47439840)
chr7 (82-115)||(10039959-10039992)
chr7 (80-112)||(4404119-4404151)
chr7 (80-112)||(4406848-4406880)
chr7 (80-112)||(6606427-6606459)
chr7 (80-112)||(6914011-6914043)
chr7 (80-112)||(16933679-16933711)
chr7 (80-112)||(16939062-16939094)
chr7 (80-112)||(19036793-19036825)
chr7 (80-112)||(20717811-20717843)
chr7 (80-112)||(20762492-20762524)
chr7 (80-112)||(29488058-29488090)
chr7 (80-112)||(33233088-33233120)
chr7 (80-112)||(34285230-34285262)
chr7 (80-112)||(35910100-35910132)
chr7 (80-112)||(37310614-37310646)
chr7 (80-112)||(40036238-40036270)
chr7 (80-112)||(42829474-42829506)
chr7 (80-112)||(43110857-43110889)
chr7 (80-112)||(47139581-47139613)
chr7 (80-112)||(47575988-47576020)
chr7 (80-112)||(47840554-47840586)
chr7 (88-115)||(43358788-43358815)
[»] chr5 (34 HSPs)
chr5 (80-118)||(14001121-14001159)
chr5 (80-118)||(29686225-29686263)
chr5 (80-118)||(833892-833930)
chr5 (8-50)||(16042671-16042713)
chr5 (80-115)||(37516892-37516927)
chr5 (80-114)||(14205324-14205358)
chr5 (80-118)||(29632710-29632748)
chr5 (88-118)||(31172286-31172316)
chr5 (84-118)||(35588615-35588649)
chr5 (88-118)||(41879793-41879823)
chr5 (82-115)||(4460524-4460557)
chr5 (85-118)||(40715808-40715841)
chr5 (80-112)||(790279-790311)
chr5 (82-114)||(1539329-1539361)
chr5 (80-112)||(2000888-2000920)
chr5 (80-112)||(2463467-2463499)
chr5 (80-112)||(3246651-3246683)
chr5 (82-114)||(5730318-5730350)
chr5 (80-112)||(10042616-10042648)
chr5 (80-112)||(11832455-11832487)
chr5 (80-112)||(19393011-19393043)
chr5 (84-112)||(28400379-28400407)
chr5 (80-112)||(28746538-28746570)
chr5 (80-112)||(29874886-29874918)
chr5 (80-112)||(31298193-31298225)
chr5 (82-118)||(33322250-33322286)
chr5 (80-112)||(35380633-35380665)
chr5 (80-112)||(36515687-36515719)
chr5 (80-112)||(37461449-37461481)
chr5 (80-116)||(37516561-37516596)
chr5 (80-112)||(40307683-40307715)
chr5 (80-112)||(40507020-40507052)
chr5 (80-112)||(42416527-42416559)
chr5 (85-112)||(18041658-18041685)
[»] chr3 (35 HSPs)
chr3 (80-118)||(2594509-2594547)
chr3 (80-115)||(34230509-34230544)
chr3 (80-112)||(10617010-10617042)
chr3 (82-118)||(36643586-36643622)
chr3 (87-118)||(42618142-42618173)
chr3 (80-118)||(21363660-21363698)
chr3 (80-118)||(21594496-21594534)
chr3 (88-118)||(28170641-28170671)
chr3 (88-118)||(44177008-44177038)
chr3 (80-118)||(47409629-47409667)
chr3 (84-118)||(50585774-50585808)
chr3 (85-118)||(12170948-12170981)
chr3 (79-112)||(54831503-54831536)
chr3 (80-112)||(915855-915887)
chr3 (80-112)||(5254905-5254937)
chr3 (82-114)||(8231690-8231722)
chr3 (80-112)||(33899744-33899776)
chr3 (80-112)||(35530037-35530069)
chr3 (80-112)||(35690933-35690965)
chr3 (80-112)||(37413171-37413203)
chr3 (79-111)||(39199172-39199204)
chr3 (80-112)||(39721084-39721116)
chr3 (80-112)||(39798993-39799025)
chr3 (80-112)||(41991886-41991918)
chr3 (80-112)||(42188440-42188472)
chr3 (80-112)||(43317073-43317105)
chr3 (80-112)||(44075847-44075879)
chr3 (80-112)||(44762944-44762976)
chr3 (80-112)||(46851172-46851204)
chr3 (80-112)||(50932549-50932581)
chr3 (80-112)||(52468328-52468360)
chr3 (87-118)||(36170479-36170510)
chr3 (80-111)||(41988470-41988501)
chr3 (80-107)||(47410517-47410544)
chr3 (80-111)||(54196222-54196253)
[»] chr1 (34 HSPs)
chr1 (80-118)||(21966268-21966306)
chr1 (80-112)||(11606843-11606875)
chr1 (82-118)||(31239095-31239131)
chr1 (80-112)||(44821040-44821072)
chr1 (80-114)||(5257088-5257122)
chr1 (80-114)||(6295051-6295085)
chr1 (80-118)||(10427369-10427407)
chr1 (80-118)||(12294476-12294514)
chr1 (80-118)||(27348988-27349026)
chr1 (80-110)||(33218427-33218457)
chr1 (80-117)||(43019501-43019539)
chr1 (79-112)||(34652115-34652148)
chr1 (79-112)||(44065574-44065607)
chr1 (80-112)||(1322737-1322769)
chr1 (80-112)||(7308671-7308703)
chr1 (80-112)||(16096696-16096728)
chr1 (80-112)||(17366566-17366598)
chr1 (80-112)||(18090833-18090865)
chr1 (80-112)||(18109286-18109318)
chr1 (80-112)||(24473770-24473802)
chr1 (80-112)||(33932743-33932775)
chr1 (80-112)||(39729424-39729456)
chr1 (80-112)||(39879356-39879388)
chr1 (80-112)||(43122383-43122415)
chr1 (80-112)||(43257203-43257235)
chr1 (82-114)||(44440433-44440465)
chr1 (80-112)||(46040783-46040815)
chr1 (80-112)||(49571029-49571061)
chr1 (80-112)||(50397617-50397649)
chr1 (86-113)||(33818676-33818703)
chr1 (86-113)||(33894442-33894469)
chr1 (88-115)||(35112429-35112456)
chr1 (79-110)||(38190063-38190094)
chr1 (79-114)||(42470408-42470443)
[»] scaffold0047 (1 HSPs)
scaffold0047 (82-118)||(65555-65591)
[»] chr6 (19 HSPs)
chr6 (80-118)||(8866868-8866906)
chr6 (80-118)||(32279615-32279653)
chr6 (82-118)||(29729665-29729701)
chr6 (85-118)||(1930785-1930818)
chr6 (85-118)||(3054388-3054421)
chr6 (80-113)||(8872564-8872597)
chr6 (79-116)||(28219488-28219525)
chr6 (80-112)||(173281-173313)
chr6 (80-112)||(246997-247029)
chr6 (80-112)||(6018792-6018824)
chr6 (80-112)||(7540930-7540962)
chr6 (80-112)||(12582920-12582952)
chr6 (80-112)||(13459383-13459415)
chr6 (80-112)||(28231634-28231666)
chr6 (80-112)||(34318766-34318798)
chr6 (88-115)||(4578017-4578044)
chr6 (86-113)||(28471568-28471595)
chr6 (88-115)||(32570384-32570411)
chr6 (85-112)||(33975586-33975613)
[»] chr2 (33 HSPs)
chr2 (80-118)||(28416984-28417022)
chr2 (82-114)||(11090128-11090160)
chr2 (82-114)||(38502279-38502311)
chr2 (80-118)||(8904956-8904994)
chr2 (80-118)||(11681640-11681678)
chr2 (80-118)||(11694214-11694252)
chr2 (80-118)||(12599551-12599589)
chr2 (88-118)||(23914615-23914645)
chr2 (80-114)||(27649240-27649274)
chr2 (88-118)||(31054321-31054351)
chr2 (85-118)||(14750408-14750441)
chr2 (81-118)||(25637641-25637678)
chr2 (80-112)||(668514-668546)
chr2 (80-112)||(1117851-1117883)
chr2 (80-112)||(1995588-1995620)
chr2 (80-112)||(3079541-3079573)
chr2 (80-112)||(3708031-3708063)
chr2 (80-112)||(6345383-6345415)
chr2 (80-112)||(9799787-9799819)
chr2 (80-112)||(11869353-11869385)
chr2 (80-112)||(13552121-13552153)
chr2 (80-112)||(14325860-14325892)
chr2 (80-112)||(22077982-22078014)
chr2 (80-112)||(28499894-28499926)
chr2 (80-112)||(32292233-32292265)
chr2 (80-112)||(35287869-35287901)
chr2 (80-112)||(35360746-35360778)
chr2 (80-112)||(38709530-38709562)
chr2 (80-112)||(38878963-38878995)
chr2 (80-112)||(40202054-40202086)
chr2 (80-112)||(41452657-41452689)
chr2 (80-115)||(3752481-3752516)
chr2 (82-109)||(31126368-31126395)
[»] chr8 (42 HSPs)
chr8 (85-118)||(11420420-11420453)
chr8 (82-118)||(4438566-4438602)
chr8 (88-118)||(1657948-1657978)
chr8 (80-118)||(3501392-3501430)
chr8 (88-118)||(6335895-6335925)
chr8 (84-118)||(10794647-10794681)
chr8 (80-118)||(31261304-31261342)
chr8 (80-114)||(34151143-34151177)
chr8 (80-118)||(34882316-34882354)
chr8 (80-113)||(38137937-38137970)
chr8 (8-41)||(43219507-43219540)
chr8 (80-112)||(170413-170445)
chr8 (80-112)||(2185074-2185106)
chr8 (80-112)||(6303123-6303155)
chr8 (80-112)||(6746981-6747013)
chr8 (80-112)||(6815381-6815413)
chr8 (80-112)||(11579015-11579047)
chr8 (80-112)||(11924119-11924151)
chr8 (80-112)||(12261693-12261725)
chr8 (80-112)||(20666054-20666086)
chr8 (80-112)||(23969039-23969071)
chr8 (80-112)||(27914338-27914370)
chr8 (80-112)||(27960757-27960789)
chr8 (80-112)||(30551416-30551448)
chr8 (80-112)||(33848908-33848940)
chr8 (80-112)||(36059496-36059528)
chr8 (80-112)||(37027304-37027336)
chr8 (80-112)||(37034646-37034678)
chr8 (80-112)||(38139135-38139167)
chr8 (80-112)||(38909109-38909141)
chr8 (80-112)||(39486248-39486280)
chr8 (80-112)||(39525275-39525307)
chr8 (80-112)||(40048889-40048921)
chr8 (80-112)||(41526137-41526169)
chr8 (80-112)||(42063313-42063345)
chr8 (80-112)||(44216166-44216198)
chr8 (80-112)||(44937878-44937910)
chr8 (80-112)||(45139269-45139301)
chr8 (80-118)||(1351706-1351745)
chr8 (80-111)||(6657236-6657267)
chr8 (80-111)||(6737638-6737669)
chr8 (79-114)||(8082798-8082833)
[»] scaffold0112 (1 HSPs)
scaffold0112 (8-40)||(33194-33226)
[»] scaffold0093 (1 HSPs)
scaffold0093 (8-40)||(17767-17799)
[»] scaffold0035 (1 HSPs)
scaffold0035 (88-118)||(81865-81895)
[»] scaffold0009 (1 HSPs)
scaffold0009 (79-117)||(53727-53765)
[»] scaffold0038 (2 HSPs)
scaffold0038 (79-116)||(19986-20023)
scaffold0038 (80-112)||(32131-32163)
[»] scaffold0283 (1 HSPs)
scaffold0283 (80-112)||(9218-9250)
[»] scaffold0078 (1 HSPs)
scaffold0078 (84-112)||(5869-5897)
[»] scaffold0013 (1 HSPs)
scaffold0013 (83-118)||(101108-101143)


Alignment Details
Target: chr4 (Bit Score: 99; Significance: 2e-49; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 2e-49
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 4608790 - 4608680
Alignment:
Q  8 ccttgtaaatacgagagacaagagaatcaggttcaatctgaaagtagttacatgaagaaacgtatcaagccttgtcattcaaaaagataagaatttatat 107  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4608790 ccttgtaaatacgagagacaagagaatcaggttcggtctgaaagtagttacatgaaggaacgtatcaagccttgtcattcaaaaagataagaatttatat 4608691  T
Q  108 tatatttgtta 118  Q
    |||||||||||    
T  4608690 tatatttgtta 4608680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 4505831 - 4505865
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    |||||||||||||||||||||||||||||||||||    
T  4505831 tgtcattcaaaaagataagaatttatattatattt 4505865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 33389934 - 33389900
Alignment:
Q  84 attcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||    
T  33389934 attcaaaaagataagaatttatattatatttgtta 33389900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 47683476 - 47683514
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  47683476 tgtcattcaaaaatataagaatttatattatatttgtta 47683514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 28511754 - 28511722
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||||||    
T  28511754 tgtcattcaaaaagataagaatttatattatat 28511722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 28513521 - 28513553
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||||||    
T  28513521 tgtcattcaaaaagataagaatttatattatat 28513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 52635990 - 52635955
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttg 115  Q
    ||||||||||||| ||||||||||||||||||||||    
T  52635990 tgtcattcaaaaatataagaatttatattatatttg 52635955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 1237541 - 1237575
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||| |||||||||||||||||||||||||||    
T  1237541 tgtcattaaaaaagataagaatttatattatattt 1237575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 20004817 - 20004779
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  20004817 tgtcattaaaaaatataagaatttatattatatttgtta 20004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 22160396 - 22160426
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  22160396 aaaaagataagaatttatattatatttgtta 22160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 23315945 - 23315975
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  23315945 aaaaagataagaatttatattatatttgtta 23315975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 48458464 - 48458502
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  48458464 tgtcgttcaaaaaaataagaatttatattatatttgtta 48458502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 54055336 - 54055374
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  54055336 tgtcgttcaaaaatataagaatttatattatatttgtta 54055374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 20681053 - 20681020
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatt 113  Q
    ||||||| ||||||||||||||||||||||||||    
T  20681053 tgtcatttaaaaagataagaatttatattatatt 20681020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 23628146 - 23628113
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatt 113  Q
    ||||||| ||||||||||||||||||||||||||    
T  23628146 tgtcatttaaaaagataagaatttatattatatt 23628113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 109
Target Start/End: Complemental strand, 25881868 - 25881839
Alignment:
Q  80 tgtcattcaaaaagataagaatttatatta 109  Q
    ||||||||||||||||||||||||||||||    
T  25881868 tgtcattcaaaaagataagaatttatatta 25881839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 27746717 - 27746684
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatt 113  Q
    ||||||| ||||||||||||||||||||||||||    
T  27746717 tgtcattgaaaaagataagaatttatattatatt 27746684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 35519437 - 35519470
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatt 113  Q
    |||||||||||||||||||| |||||||||||||    
T  35519437 tgtcattcaaaaagataagattttatattatatt 35519470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 742956 - 742988
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  742956 tgtctttcaaaaagataagaatttatattatat 742988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 4088088 - 4088120
Alignment:
Q  82 tcattcaaaaagataagaatttatattatattt 114  Q
    ||||||||||| |||||||||||||||||||||    
T  4088088 tcattcaaaaacataagaatttatattatattt 4088120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 6028660 - 6028628
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  6028660 tgtcattaaaaaagataagaatttatattatat 6028628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 8151059 - 8151027
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  8151059 tgtcatttaaaaagataagaatttatattatat 8151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 9097956 - 9097988
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  9097956 tgtctttcaaaaagataagaatttatattatat 9097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 10262460 - 10262492
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  10262460 tgtctttcaaaaagataagaatttatattatat 10262492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 11180762 - 11180730
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  11180762 tgtcatttaaaaagataagaatttatattatat 11180730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 13860176 - 13860144
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  13860176 tgtcattaaaaaagataagaatttatattatat 13860144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 15518459 - 15518427
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  15518459 tgtctttcaaaaagataagaatttatattatat 15518427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 17976302 - 17976270
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  17976302 tgtcatttaaaaagataagaatttatattatat 17976270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 113
Target Start/End: Complemental strand, 19587521 - 19587493
Alignment:
Q  85 ttcaaaaagataagaatttatattatatt 113  Q
    |||||||||||||||||||||||||||||    
T  19587521 ttcaaaaagataagaatttatattatatt 19587493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 21561995 - 21561963
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  21561995 tgtctttcaaaaagataagaatttatattatat 21561963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 24080531 - 24080563
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  24080531 tgtctttcaaaaagataagaatttatattatat 24080563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 26097870 - 26097902
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  26097870 tgtcatttaaaaagataagaatttatattatat 26097902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 28361712 - 28361744
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  28361712 tgtcatttaaaaagataagaatttatattatat 28361744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 32137900 - 32137868
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||| |||||||||||    
T  32137900 tgtcattcaaaaagataagaagttatattatat 32137868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 32201173 - 32201205
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  32201173 tgtcagtcaaaaagataagaatttatattatat 32201205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 34664705 - 34664673
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  34664705 tgtcatttaaaaagataagaatttatattatat 34664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 39651590 - 39651558
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  39651590 tgtcatttaaaaagataagaatttatattatat 39651558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 39657568 - 39657536
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  39657568 tgtcatttaaaaagataagaatttatattatat 39657536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 40664884 - 40664852
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  40664884 tgtcagtcaaaaagataagaatttatattatat 40664852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 41986740 - 41986772
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  41986740 tgtctttcaaaaagataagaatttatattatat 41986772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 43329516 - 43329484
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  43329516 tgtctttcaaaaagataagaatttatattatat 43329484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 44856004 - 44856036
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||| |||||||||    
T  44856004 tgtcattcaaaaagataagaattcatattatat 44856036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 46046014 - 46046046
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  46046014 tgtcatttaaaaagataagaatttatattatat 46046046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 51153338 - 51153306
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  51153338 tgtcatttaaaaagataagaatttatattatat 51153306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 51187518 - 51187486
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  51187518 tgtcatttaaaaagataagaatttatattatat 51187486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 51449582 - 51449550
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  51449582 tgtctttcaaaaagataagaatttatattatat 51449550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 2684265 - 2684300
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttg 115  Q
    |||||||  |||||||||||||||||||||||||||    
T  2684265 tgtcatttgaaaagataagaatttatattatatttg 2684300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 3240138 - 3240107
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattata 111  Q
    |||||||||||||||||| |||||||||||||    
T  3240138 tgtcattcaaaaagataaaaatttatattata 3240107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 26877724 - 26877689
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatattt 114  Q
    |||| ||||| |||||||||||||||||||||||||    
T  26877724 ttgttattcacaaagataagaatttatattatattt 26877689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 112
Target Start/End: Original strand, 26927405 - 26927432
Alignment:
Q  85 ttcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||||||||    
T  26927405 ttcaaaaagataagaatttatattatat 26927432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 28069709 - 28069671
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28069709 tgtcattcaaaaagataagaatttatattatatttgtta 28069671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 24650005 - 24650041
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||||    
T  24650005 tcattcaaaaagataagaatttatattatatttgtta 24650041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 38237522 - 38237484
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  38237522 tgtcattgaaaaagataagaatttatattatatttgtta 38237484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 27425717 - 27425680
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtt 117  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  27425717 tgtcattcaaaaagatatgaatttatattatatttgtt 27425680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 20135582 - 20135614
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||||||    
T  20135582 tgtcattcaaaaagataagaatttatattatat 20135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 32358884 - 32358920
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatatttg 115  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32358884 ttgtcattgaaaaagataagaatttatattatatttg 32358920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 36925366 - 36925327
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  36925366 ttgttattcaaaaagataagaatttatgttatatttgtta 36925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 1292120 - 1292086
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||| |||||||||||||||||||||||||||    
T  1292120 tgtcattaaaaaagataagaatttatattatattt 1292086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Complemental strand, 5096538 - 5096508
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  5096538 aaaaagataagaatttatattatatttgtta 5096508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 7606279 - 7606317
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  7606279 tgtcattcaaaaagataaaaatttatattatattagtta 7606317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 35338384 - 35338418
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||| |||||||||||||||||||||||||||    
T  35338384 tgtcattaaaaaagataagaatttatattatattt 35338418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 39959409 - 39959447
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  39959409 tgtcattcaaaaaaataataatttatattatatttgtta 39959447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 47439840 - 47439806
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    |||||||||||||||||| ||||||||||||||||    
T  47439840 tgtcattcaaaaagataataatttatattatattt 47439806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 10039992 - 10039959
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttg 115  Q
    |||||||||||||||| |||||||||||||||||    
T  10039992 tcattcaaaaagataataatttatattatatttg 10039959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 4404151 - 4404119
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  4404151 tgtcatttaaaaagataagaatttatattatat 4404119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 4406848 - 4406880
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  4406848 tgtcatttaaaaagataagaatttatattatat 4406880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 6606459 - 6606427
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  6606459 tgtcagtcaaaaagataagaatttatattatat 6606427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 6914011 - 6914043
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  6914011 tgtctttcaaaaagataagaatttatattatat 6914043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 16933679 - 16933711
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  16933679 tgtcatttaaaaagataagaatttatattatat 16933711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 16939062 - 16939094
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  16939062 tgtcatttaaaaagataagaatttatattatat 16939094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 19036793 - 19036825
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  19036793 tgtctttcaaaaagataagaatttatattatat 19036825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 20717843 - 20717811
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  20717843 tgtctttcaaaaagataagaatttatattatat 20717811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 20762524 - 20762492
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  20762524 tgtctttcaaaaagataagaatttatattatat 20762492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 29488090 - 29488058
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  29488090 tgtctttcaaaaagataagaatttatattatat 29488058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 33233088 - 33233120
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  33233088 tgtctttcaaaaagataagaatttatattatat 33233120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 34285230 - 34285262
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  34285230 tgtctttcaaaaagataagaatttatattatat 34285262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 35910132 - 35910100
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  35910132 tgtcatttaaaaagataagaatttatattatat 35910100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 37310614 - 37310646
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  37310614 tgtcattaaaaaagataagaatttatattatat 37310646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 40036238 - 40036270
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  40036238 tgtcatttaaaaagataagaatttatattatat 40036270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 42829474 - 42829506
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  42829474 tgtctttcaaaaagataagaatttatattatat 42829506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 43110889 - 43110857
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  43110889 tgtcatttaaaaagataagaatttatattatat 43110857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 47139613 - 47139581
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  47139613 tgtcatttaaaaagataagaatttatattatat 47139581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 47575988 - 47576020
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  47575988 tgtctttcaaaaagataagaatttatattatat 47576020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 47840586 - 47840554
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  47840586 tgtcatttaaaaagataagaatttatattatat 47840554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 115
Target Start/End: Original strand, 43358788 - 43358815
Alignment:
Q  88 aaaaagataagaatttatattatatttg 115  Q
    ||||||||||||||||||||||||||||    
T  43358788 aaaaagataagaatttatattatatttg 43358815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 14001159 - 14001121
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14001159 tgtcattcaaaaagataagaatttatattatatttgtta 14001121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 29686263 - 29686225
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29686263 tgtcattcaaaaagataagaatttatattatatttgtta 29686225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 833892 - 833930
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  833892 tgtcattcaaaaagataagaatttagattatatttgtta 833930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 16042713 - 16042671
Alignment:
Q  8 ccttgtaaatacgagagacaagagaatcaggttcaatctgaaa 50  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  16042713 ccttgtaaatacgagagataagagaatcaggttctatctgaaa 16042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 37516927 - 37516892
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttg 115  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37516927 tgtcattcaaaaatataagaatttatattatatttg 37516892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 14205358 - 14205324
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||| |||||||||||||||||||||||||||    
T  14205358 tgtcatttaaaaagataagaatttatattatattt 14205324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 29632710 - 29632748
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  29632710 tgtcatttaaaaagataagaatttatattttatttgtta 29632748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Complemental strand, 31172316 - 31172286
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  31172316 aaaaagataagaatttatattatatttgtta 31172286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 35588649 - 35588615
Alignment:
Q  84 attcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||||||||||||||||| |||||||    
T  35588649 attcaaaaagataagaatttatattatgtttgtta 35588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Complemental strand, 41879823 - 41879793
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  41879823 aaaaagataagaatttatattatatttgtta 41879793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 4460524 - 4460557
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttg 115  Q
    ||||||||||||||||||| ||||||||||||||    
T  4460524 tcattcaaaaagataagaaattatattatatttg 4460557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 40715808 - 40715841
Alignment:
Q  85 ttcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||||||||||||| ||||||||||    
T  40715808 ttcaaaaagataagaatttatatcatatttgtta 40715841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 790279 - 790311
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  790279 tgtcatttaaaaagataagaatttatattatat 790311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 1539329 - 1539361
Alignment:
Q  82 tcattcaaaaagataagaatttatattatattt 114  Q
    ||||||||||||||||||| |||||||||||||    
T  1539329 tcattcaaaaagataagaaattatattatattt 1539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 2000888 - 2000920
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||| |||||||||    
T  2000888 tgtcattcaaaaagataagaattcatattatat 2000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 2463499 - 2463467
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  2463499 tgtcatttaaaaagataagaatttatattatat 2463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 3246683 - 3246651
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  3246683 tgtcatttaaaaagataagaatttatattatat 3246651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 5730350 - 5730318
Alignment:
Q  82 tcattcaaaaagataagaatttatattatattt 114  Q
    ||||| |||||||||||||||||||||||||||    
T  5730350 tcattaaaaaagataagaatttatattatattt 5730318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 10042648 - 10042616
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  10042648 tgtcatttaaaaagataagaatttatattatat 10042616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 11832455 - 11832487
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  11832455 tgtcattaaaaaagataagaatttatattatat 11832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 19393043 - 19393011
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  19393043 tgtctttcaaaaagataagaatttatattatat 19393011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 28400379 - 28400407
Alignment:
Q  84 attcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||    
T  28400379 attcaaaaagataagaatttatattatat 28400407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 28746538 - 28746570
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  28746538 tgtcatttaaaaagataagaatttatattatat 28746570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 29874886 - 29874918
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  29874886 tgtcatttaaaaagataagaatttatattatat 29874918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 31298193 - 31298225
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  31298193 tgtctttcaaaaagataagaatttatattatat 31298225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 33322250 - 33322286
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||  ||||||||||||||||||||||||    
T  33322250 tcattcaaaaaattaagaatttatattatatttgtta 33322286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 35380633 - 35380665
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  35380633 tgtcatttaaaaagataagaatttatattatat 35380665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 36515719 - 36515687
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||| |||||||||    
T  36515719 tgtcattcaaaaagataagaattcatattatat 36515687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 37461481 - 37461449
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  37461481 tgtctttcaaaaagataagaatttatattatat 37461449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 37516596 - 37516561
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgt 116  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37516596 tgtcattcaaaaa-ataagaatttatattatatttgt 37516561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 40307715 - 40307683
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  40307715 tgtcagtcaaaaagataagaatttatattatat 40307683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 40507020 - 40507052
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  40507020 tgtcatttaaaaagataagaatttatattatat 40507052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 42416559 - 42416527
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  42416559 tgtcatttaaaaagataagaatttatattatat 42416527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 112
Target Start/End: Original strand, 18041658 - 18041685
Alignment:
Q  85 ttcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||||||||    
T  18041658 ttcaaaaagataagaatttatattatat 18041685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 2594509 - 2594547
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2594509 tgtcattcaaaaagataagaatttatattatatttgtta 2594547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 34230544 - 34230509
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttg 115  Q
    ||||||||||||||||||||||||||||||||||||    
T  34230544 tgtcattcaaaaagataagaatttatattatatttg 34230509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 10617042 - 10617010
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||||||    
T  10617042 tgtcattcaaaaagataagaatttatattatat 10617010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 36643622 - 36643586
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36643622 tcattcaaaacgataagaatttatattatatttgtta 36643586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 118
Target Start/End: Original strand, 42618142 - 42618173
Alignment:
Q  87 caaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||||||||||||||||||||||    
T  42618142 caaaaagataagaatttatattatatttgtta 42618173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 21363698 - 21363660
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  21363698 tgtcattcaaaaagataaaaatgtatattatatttgtta 21363660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 21594534 - 21594496
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  21594534 tgtcactcaaaaagatgagaatttatattatatttgtta 21594496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 28170641 - 28170671
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  28170641 aaaaagataagaatttatattatatttgtta 28170671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Complemental strand, 44177038 - 44177008
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  44177038 aaaaagataagaatttatattatatttgtta 44177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 47409629 - 47409667
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  47409629 tgtcatccaaaaagataagaatttatattatacttgtta 47409667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 50585774 - 50585808
Alignment:
Q  84 attcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||| ||||||||||||||||||||    
T  50585774 attcaaaaagataaaaatttatattatatttgtta 50585808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 12170948 - 12170981
Alignment:
Q  85 ttcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||| |||||||||||||||||||||||||    
T  12170948 ttcaaaaatataagaatttatattatatttgtta 12170981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 54831536 - 54831503
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||| |||||||||||||||||||||||||    
T  54831536 ttgtcattaaaaaagataagaatttatattatat 54831503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 915887 - 915855
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  915887 tgtctttcaaaaagataagaatttatattatat 915855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 5254905 - 5254937
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  5254905 tgtctttcaaaaagataagaatttatattatat 5254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 8231722 - 8231690
Alignment:
Q  82 tcattcaaaaagataagaatttatattatattt 114  Q
    ||||| |||||||||||||||||||||||||||    
T  8231722 tcattaaaaaagataagaatttatattatattt 8231690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 33899776 - 33899744
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  33899776 tgtcatttaaaaagataagaatttatattatat 33899744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 35530037 - 35530069
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  35530037 tgtcatttaaaaagataagaatttatattatat 35530069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 35690933 - 35690965
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  35690933 tgtcagtcaaaaagataagaatttatattatat 35690965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 37413203 - 37413171
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  37413203 tgtcatttaaaaagataagaatttatattatat 37413171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 39199204 - 39199172
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattata 111  Q
    |||||||||||||| ||||||||||||||||||    
T  39199204 ttgtcattcaaaaaaataagaatttatattata 39199172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 39721116 - 39721084
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  39721116 tgtcatttaaaaagataagaatttatattatat 39721084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 39798993 - 39799025
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  39798993 tgtctttcaaaaagataagaatttatattatat 39799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 41991886 - 41991918
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  41991886 tgtcatttaaaaagataagaatttatattatat 41991918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 42188440 - 42188472
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  42188440 tgtcagtcaaaaagataagaatttatattatat 42188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 43317073 - 43317105
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  43317073 tgtcatttaaaaagataagaatttatattatat 43317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 44075847 - 44075879
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  44075847 tgtctttcaaaaagataagaatttatattatat 44075879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 44762944 - 44762976
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  44762944 tgtcatttaaaaagataagaatttatattatat 44762976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 46851172 - 46851204
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||| ||||||||||||||    
T  46851172 tgtcattcaaaaagataataatttatattatat 46851204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 50932581 - 50932549
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  50932581 tgtcagtcaaaaagataagaatttatattatat 50932549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 52468328 - 52468360
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  52468328 tgtctttcaaaaagataagaatttatattatat 52468360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 118
Target Start/End: Original strand, 36170479 - 36170510
Alignment:
Q  87 caaaaagataagaatttatattatatttgtta 118  Q
    |||||| |||||||||||||||||||||||||    
T  36170479 caaaaatataagaatttatattatatttgtta 36170510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 41988470 - 41988501
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattata 111  Q
    ||||||||| ||||||||||||||||||||||    
T  41988470 tgtcattcataaagataagaatttatattata 41988501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 107
Target Start/End: Complemental strand, 47410544 - 47410517
Alignment:
Q  80 tgtcattcaaaaagataagaatttatat 107  Q
    ||||||||||||||||||||||||||||    
T  47410544 tgtcattcaaaaagataagaatttatat 47410517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 54196222 - 54196253
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattata 111  Q
    ||||||| ||||||||||||||||||||||||    
T  54196222 tgtcatttaaaaagataagaatttatattata 54196253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 21966268 - 21966306
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21966268 tgtcattcaaaaagataagaatttatattatatttgtta 21966306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 11606843 - 11606875
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||||||    
T  11606843 tgtcattcaaaaagataagaatttatattatat 11606875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 31239095 - 31239131
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||| |||||||||||||||||||||||||||||||    
T  31239095 tcatttaaaaagataagaatttatattatatttgtta 31239131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 44821072 - 44821040
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||||||    
T  44821072 tgtcattcaaaaagataagaatttatattatat 44821040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 5257088 - 5257122
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||||||||||||||||||||||| |||||||    
T  5257088 tgtcattcaaaaagataagaatttatagtatattt 5257122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 6295085 - 6295051
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    |||||||||||||||||||||||||| ||||||||    
T  6295085 tgtcattcaaaaagataagaatttatgttatattt 6295051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 10427369 - 10427407
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  10427369 tgtcatttaaaaagataagaacttatattatatttgtta 10427407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 12294476 - 12294514
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  12294476 tgtcattttaaaagataagaatttatattatatttgtta 12294514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 27348988 - 27349026
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  27348988 tgtcattcaaaaatataataatttatattatatttgtta 27349026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 33218427 - 33218457
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattat 110  Q
    |||||||||||||||||||||||||||||||    
T  33218427 tgtcattcaaaaagataagaatttatattat 33218457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 43019539 - 43019501
Alignment:
Q  80 tgtcattcaaaaa-gataagaatttatattatatttgtt 117  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  43019539 tgtcattcaaaaaagataagaatttatattatatttgtt 43019501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 112
Target Start/End: Complemental strand, 34652148 - 34652115
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||| |||||||||||||||||||||||||    
T  34652148 ttgtcatttaaaaagataagaatttatattatat 34652115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 112
Target Start/End: Original strand, 44065574 - 44065607
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||| ||||||||||||    
T  44065574 ttgtcattcaaaaagataagagtttatattatat 44065607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 1322737 - 1322769
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  1322737 tgtcatttaaaaagataagaatttatattatat 1322769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 7308671 - 7308703
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  7308671 tgtcatttaaaaagataagaatttatattatat 7308703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 16096728 - 16096696
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  16096728 tgtcagtcaaaaagataagaatttatattatat 16096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 17366566 - 17366598
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  17366566 tgtcatttaaaaagataagaatttatattatat 17366598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 18090865 - 18090833
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  18090865 tgtctttcaaaaagataagaatttatattatat 18090833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 18109318 - 18109286
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  18109318 tgtctttcaaaaagataagaatttatattatat 18109286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 24473770 - 24473802
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  24473770 tgtcatttaaaaagataagaatttatattatat 24473802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 33932775 - 33932743
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  33932775 tgtcatttaaaaagataagaatttatattatat 33932743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 39729424 - 39729456
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  39729424 tgtcatttaaaaagataagaatttatattatat 39729456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 39879356 - 39879388
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  39879356 tgtcatttaaaaagataagaatttatattatat 39879388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 43122415 - 43122383
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  43122415 tgtcagtcaaaaagataagaatttatattatat 43122383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 43257203 - 43257235
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  43257203 tgtctttcaaaaagataagaatttatattatat 43257235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 44440433 - 44440465
Alignment:
Q  82 tcattcaaaaagataagaatttatattatattt 114  Q
    |||||||||||||||| ||||||||||||||||    
T  44440433 tcattcaaaaagataaaaatttatattatattt 44440465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 46040783 - 46040815
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  46040783 tgtcatttaaaaagataagaatttatattatat 46040815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 49571061 - 49571029
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  49571061 tgtcatttaaaaagataagaatttatattatat 49571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 50397617 - 50397649
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  50397617 tgtctttcaaaaagataagaatttatattatat 50397649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 113
Target Start/End: Original strand, 33818676 - 33818703
Alignment:
Q  86 tcaaaaagataagaatttatattatatt 113  Q
    ||||||||||||||||||||||||||||    
T  33818676 tcaaaaagataagaatttatattatatt 33818703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 113
Target Start/End: Original strand, 33894442 - 33894469
Alignment:
Q  86 tcaaaaagataagaatttatattatatt 113  Q
    ||||||||||||||||||||||||||||    
T  33894442 tcaaaaagataagaatttatattatatt 33894469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 115
Target Start/End: Original strand, 35112429 - 35112456
Alignment:
Q  88 aaaaagataagaatttatattatatttg 115  Q
    ||||||||||||||||||||||||||||    
T  35112429 aaaaagataagaatttatattatatttg 35112456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 110
Target Start/End: Complemental strand, 38190094 - 38190063
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattat 110  Q
    |||| |||||||||||||||||||||||||||    
T  38190094 ttgtaattcaaaaagataagaatttatattat 38190063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 42470443 - 42470408
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatattt 114  Q
    |||||||| ||||| |||||||||||||||||||||    
T  42470443 ttgtcattaaaaaatataagaatttatattatattt 42470408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 37; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 65555 - 65591
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||||||||    
T  65555 tcattcaaaaagataagaatttatattatatttgtta 65591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 8866906 - 8866868
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  8866906 tgtcattaaaaaagataagaatttatattatatttgtta 8866868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 32279653 - 32279615
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  32279653 tgtcattaaaaaagataagaatttatattatatttgtta 32279615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 29729701 - 29729665
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29729701 tcattaaaaaagataagaatttatattatatttgtta 29729665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 1930818 - 1930785
Alignment:
Q  85 ttcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||| |||||||||||||||||||||||||    
T  1930818 ttcaaaaatataagaatttatattatatttgtta 1930785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 3054388 - 3054421
Alignment:
Q  85 ttcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||| |||||||||||||||||||||||||    
T  3054388 ttcaaaaatataagaatttatattatatttgtta 3054421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 8872597 - 8872564
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatt 113  Q
    ||||||| ||||||||||||||||||||||||||    
T  8872597 tgtcattaaaaaagataagaatttatattatatt 8872564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 28219488 - 28219525
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatatttgt 116  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  28219488 ttgtcattgcaaaagataagaatttatattatatttgt 28219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 173281 - 173313
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  173281 tgtcatttaaaaagataagaatttatattatat 173313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 247029 - 246997
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  247029 tgtctttcaaaaagataagaatttatattatat 246997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 6018792 - 6018824
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  6018792 tgtcatttaaaaagataagaatttatattatat 6018824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 7540962 - 7540930
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  7540962 tgtcatttaaaaagataagaatttatattatat 7540930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 12582920 - 12582952
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  12582920 tgtctttcaaaaagataagaatttatattatat 12582952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 13459383 - 13459415
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  13459383 tgtctttcaaaaagataagaatttatattatat 13459415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 28231634 - 28231666
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  28231634 tgtctttcaaaaagataagaatttatattatat 28231666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 34318798 - 34318766
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  34318798 tgtctttcaaaaagataagaatttatattatat 34318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 115
Target Start/End: Complemental strand, 4578044 - 4578017
Alignment:
Q  88 aaaaagataagaatttatattatatttg 115  Q
    ||||||||||||||||||||||||||||    
T  4578044 aaaaagataagaatttatattatatttg 4578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 113
Target Start/End: Complemental strand, 28471595 - 28471568
Alignment:
Q  86 tcaaaaagataagaatttatattatatt 113  Q
    ||||||||||||||||||||||||||||    
T  28471595 tcaaaaagataagaatttatattatatt 28471568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 115
Target Start/End: Complemental strand, 32570411 - 32570384
Alignment:
Q  88 aaaaagataagaatttatattatatttg 115  Q
    ||||||||||||||||||||||||||||    
T  32570411 aaaaagataagaatttatattatatttg 32570384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 112
Target Start/End: Complemental strand, 33975613 - 33975586
Alignment:
Q  85 ttcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||||||||    
T  33975613 ttcaaaaagataagaatttatattatat 33975586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000004; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 28416984 - 28417022
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  28416984 tgtcattcaaaaagataagaatttatattatagttgtta 28417022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 11090128 - 11090160
Alignment:
Q  82 tcattcaaaaagataagaatttatattatattt 114  Q
    |||||||||||||||||||||||||||||||||    
T  11090128 tcattcaaaaagataagaatttatattatattt 11090160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 38502279 - 38502311
Alignment:
Q  82 tcattcaaaaagataagaatttatattatattt 114  Q
    |||||||||||||||||||||||||||||||||    
T  38502279 tcattcaaaaagataagaatttatattatattt 38502311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 8904994 - 8904956
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  8904994 tgtcattcaacaagataagaatttatatcatatttgtta 8904956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 11681678 - 11681640
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  11681678 tgtcattcaaaaatataaaaatttatattatatttgtta 11681640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 11694252 - 11694214
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  11694252 tgtcattcaaaaatataaaaatttatattatatttgtta 11694214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 12599551 - 12599589
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  12599551 tgtcattaagaaagataagaatttatattatatttgtta 12599589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 23914615 - 23914645
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  23914615 aaaaagataagaatttatattatatttgtta 23914645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 27649240 - 27649274
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||| |||||||||||||||||||||||||||    
T  27649240 tgtcattgaaaaagataagaatttatattatattt 27649274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 31054321 - 31054351
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  31054321 aaaaagataagaatttatattatatttgtta 31054351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 14750441 - 14750408
Alignment:
Q  85 ttcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||| |||||||||||||||||||||||||    
T  14750441 ttcaaaaatataagaatttatattatatttgtta 14750408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 25637678 - 25637641
Alignment:
Q  81 gtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||| | |||||||||||||||||||||||||||||    
T  25637678 gtcatttacaaagataagaatttatattatatttgtta 25637641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 668514 - 668546
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  668514 tgtcatttaaaaagataagaatttatattatat 668546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 1117883 - 1117851
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  1117883 tgtcatttaaaaagataagaatttatattatat 1117851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 1995588 - 1995620
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  1995588 tgtctttcaaaaagataagaatttatattatat 1995620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 3079573 - 3079541
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  3079573 tgtcatttaaaaagataagaatttatattatat 3079541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 3708063 - 3708031
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  3708063 tgtctttcaaaaagataagaatttatattatat 3708031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 6345383 - 6345415
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  6345383 tgtctttcaaaaagataagaatttatattatat 6345415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 9799787 - 9799819
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||| ||||||    
T  9799787 tgtcattcaaaaagataagaatttatgttatat 9799819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 11869353 - 11869385
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  11869353 tgtctttcaaaaagataagaatttatattatat 11869385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 13552121 - 13552153
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  13552121 tgtcatttaaaaagataagaatttatattatat 13552153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 14325860 - 14325892
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  14325860 tgtctttcaaaaagataagaatttatattatat 14325892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 22078014 - 22077982
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  22078014 tgtcatttaaaaagataagaatttatattatat 22077982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 28499926 - 28499894
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  28499926 tgtctttcaaaaagataagaatttatattatat 28499894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 32292265 - 32292233
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  32292265 tgtcatttaaaaagataagaatttatattatat 32292233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 35287869 - 35287901
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  35287869 tgtctttcaaaaagataagaatttatattatat 35287901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 35360746 - 35360778
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  35360746 tgtctttcaaaaagataagaatttatattatat 35360778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 38709562 - 38709530
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  38709562 tgtcatttaaaaagataagaatttatattatat 38709530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 38878995 - 38878963
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  38878995 tgtcatttaaaaagataagaatttatattatat 38878963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 40202086 - 40202054
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  40202086 tgtcatttaaaaagataagaatttatattatat 40202054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 41452689 - 41452657
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  41452689 tgtcatttaaaaagataagaatttatattatat 41452657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 3752516 - 3752481
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttg 115  Q
    ||||||| |||||||||||||||||||||| |||||    
T  3752516 tgtcatttaaaaagataagaatttatattacatttg 3752481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 109
Target Start/End: Complemental strand, 31126395 - 31126368
Alignment:
Q  82 tcattcaaaaagataagaatttatatta 109  Q
    ||||||||||||||||||||||||||||    
T  31126395 tcattcaaaaagataagaatttatatta 31126368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000002; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 11420453 - 11420420
Alignment:
Q  85 ttcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||||||||||||||||||||||||||||||    
T  11420453 ttcaaaaagataagaatttatattatatttgtta 11420420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 4438566 - 4438602
Alignment:
Q  82 tcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4438566 tcattaaaaaagataagaatttatattatatttgtta 4438602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 1657948 - 1657978
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  1657948 aaaaagataagaatttatattatatttgtta 1657978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 3501430 - 3501392
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  3501430 tgtcattcaaaatgataagaacttatattatatttgtta 3501392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 6335895 - 6335925
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  6335895 aaaaagataagaatttatattatatttgtta 6335925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 10794681 - 10794647
Alignment:
Q  84 attcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||| ||||||||||||    
T  10794681 attcaaaaagataagaatttatgttatatttgtta 10794647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 31261342 - 31261304
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  31261342 tgtcattaaaaaagataagaaattatattatatttgtta 31261304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 34151143 - 34151177
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||| |||||||||||||||||||||||||||    
T  34151143 tgtcatttaaaaagataagaatttatattatattt 34151177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 34882316 - 34882354
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  34882316 tgtcattcaaaatgataataatttatattatatttgtta 34882354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 38137937 - 38137970
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatatt 113  Q
    ||||||| ||||||||||||||||||||||||||    
T  38137937 tgtcatttaaaaagataagaatttatattatatt 38137970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 43219507 - 43219540
Alignment:
Q  8 ccttgtaaatacgagagacaagagaatcaggttc 41  Q
    |||||||||| |||||||||||||||||||||||    
T  43219507 ccttgtaaatgcgagagacaagagaatcaggttc 43219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 170413 - 170445
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  170413 tgtcaatcaaaaagataagaatttatattatat 170445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 2185074 - 2185106
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  2185074 tgtcagtcaaaaagataagaatttatattatat 2185106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 6303123 - 6303155
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  6303123 tgtctttcaaaaagataagaatttatattatat 6303155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 6747013 - 6746981
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  6747013 tgtcatttaaaaagataagaatttatattatat 6746981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 6815413 - 6815381
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  6815413 tgtcagtcaaaaagataagaatttatattatat 6815381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 11579047 - 11579015
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  11579047 tgtcatttaaaaagataagaatttatattatat 11579015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 11924151 - 11924119
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||| |||||||||||||||||||||||||||    
T  11924151 tgtcagtcaaaaagataagaatttatattatat 11924119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 12261693 - 12261725
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  12261693 tgtcatttaaaaagataagaatttatattatat 12261725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 20666054 - 20666086
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  20666054 tgtctttcaaaaagataagaatttatattatat 20666086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 23969039 - 23969071
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  23969039 tgtctttcaaaaagataagaatttatattatat 23969071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 27914338 - 27914370
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||| |||||||||    
T  27914338 tgtcattcaaaaagataagaattcatattatat 27914370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 27960757 - 27960789
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||||||||||||||||||| |||||||||    
T  27960757 tgtcattcaaaaagataagaattcatattatat 27960789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 30551416 - 30551448
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  30551416 tgtctttcaaaaagataagaatttatattatat 30551448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 33848908 - 33848940
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  33848908 tgtcatttaaaaagataagaatttatattatat 33848940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 36059496 - 36059528
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  36059496 tgtcatttaaaaagataagaatttatattatat 36059528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 37027336 - 37027304
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  37027336 tgtctttcaaaaagataagaatttatattatat 37027304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 37034678 - 37034646
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  37034678 tgtcatttaaaaagataagaatttatattatat 37034646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 38139167 - 38139135
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  38139167 tgtcatttaaaaagataagaatttatattatat 38139135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 38909141 - 38909109
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  38909141 tgtcatttaaaaagataagaatttatattatat 38909109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 39486248 - 39486280
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  39486248 tgtcatttaaaaagataagaatttatattatat 39486280  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 39525307 - 39525275
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  39525307 tgtcatttaaaaagataagaatttatattatat 39525275  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 40048889 - 40048921
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  40048889 tgtcatttaaaaagataagaatttatattatat 40048921  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 41526169 - 41526137
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  41526169 tgtcatttaaaaagataagaatttatattatat 41526137  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 42063313 - 42063345
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  42063313 tgtctttcaaaaagataagaatttatattatat 42063345  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 44216166 - 44216198
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  44216166 tgtctttcaaaaagataagaatttatattatat 44216198  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 44937910 - 44937878
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  44937910 tgtctttcaaaaagataagaatttatattatat 44937878  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 45139269 - 45139301
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    ||||||| |||||||||||||||||||||||||    
T  45139269 tgtcatttaaaaagataagaatttatattatat 45139301  T

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Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 1351706 - 1351745
Alignment:
Q  80 tgtcattcaaaaagataag-aatttatattatatttgtta 118  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  1351706 tgtcattcaaaaatataaggaatttatattatatttgtta 1351745  T

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Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 6657267 - 6657236
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattata 111  Q
    ||||||| ||||||||||||||||||||||||    
T  6657267 tgtcatttaaaaagataagaatttatattata 6657236  T

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Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 111
Target Start/End: Complemental strand, 6737669 - 6737638
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattata 111  Q
    ||||||| ||||||||||||||||||||||||    
T  6737669 tgtcatttaaaaagataagaatttatattata 6737638  T

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Target: chr8; HSP #42
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 8082833 - 8082798
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatattt 114  Q
    ||||||||||||||||||| ||||| ||||||||||    
T  8082833 ttgtcattcaaaaagataaaaatttctattatattt 8082798  T

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Target: scaffold0112 (Bit Score: 33; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 33226 - 33194
Alignment:
Q  8 ccttgtaaatacgagagacaagagaatcaggtt 40  Q
    |||||||||||||||||||||||||||||||||    
T  33226 ccttgtaaatacgagagacaagagaatcaggtt 33194  T

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Target: scaffold0093 (Bit Score: 33; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 17767 - 17799
Alignment:
Q  8 ccttgtaaatacgagagacaagagaatcaggtt 40  Q
    |||||||||||||||||||||||||||||||||    
T  17767 ccttgtaaatacgagagacaagagaatcaggtt 17799  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 118
Target Start/End: Original strand, 81865 - 81895
Alignment:
Q  88 aaaaagataagaatttatattatatttgtta 118  Q
    |||||||||||||||||||||||||||||||    
T  81865 aaaaagataagaatttatattatatttgtta 81895  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 53727 - 53765
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatatttgtt 117  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  53727 ttgtcattaaaaaagataaaaatttatattatatttgtt 53765  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.00000004; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 19986 - 20023
Alignment:
Q  79 ttgtcattcaaaaagataagaatttatattatatttgt 116  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  19986 ttgtcattgcaaaagataagaatttatattatatttgt 20023  T

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Target: scaffold0038; HSP #2
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 32131 - 32163
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  32131 tgtctttcaaaaagataagaatttatattatat 32163  T

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Target: scaffold0283 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 9250 - 9218
Alignment:
Q  80 tgtcattcaaaaagataagaatttatattatat 112  Q
    |||| ||||||||||||||||||||||||||||    
T  9250 tgtctttcaaaaagataagaatttatattatat 9218  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 112
Target Start/End: Original strand, 5869 - 5897
Alignment:
Q  84 attcaaaaagataagaatttatattatat 112  Q
    |||||||||||||||||||||||||||||    
T  5869 attcaaaaagataagaatttatattatat 5897  T

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Target: scaffold0013 (Bit Score: 28; Significance: 0.0000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 118
Target Start/End: Complemental strand, 101143 - 101108
Alignment:
Q  83 cattcaaaaagataagaatttatattatatttgtta 118  Q
    |||| ||||||||| |||||||||||||||||||||    
T  101143 cattaaaaaagatatgaatttatattatatttgtta 101108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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