View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5015-Insertion-9 (Length: 433)

Name: NF5015-Insertion-9
Description: NF5015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5015-Insertion-9
NF5015-Insertion-9
[»] chr7 (1 HSPs)
chr7 (8-433)||(27034429-27034851)


Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 8 - 433
Target Start/End: Original strand, 27034429 - 27034851
Alignment:
Q  8 ataagtaggagaaaaacagtgtatatgatgtcaaatccttacatttattgttttcaaaatagaaaaaataaatctaatgtttatgatgatnnnnnnnnnn 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||              
T  27034429 ataagtaggagaaaaacagtgtatatgatgtcaaatccttacatttattgttttcaaaa-------aataaatctaatgtttatgatgataaaaaaaaaa 27034521  T
Q  108 nn--tcaaccaaatgaacaacgatggaaggttttgaaaatagattcttgctaacgagtcttattgaaacactcttataatccacagtagtgcaacaaaat 205  Q
        ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  27034522 aaaatcaaccaaatgaataacgatggaaggttttgaaaatagattcttgctaacgagtctcattgaaacactcttataatccacagtaatgcaacaaaat 27034621  T
Q  206 tctagtccatttcgcaaagattcttccaaacannnnnnnnnnngacaagacattcttcccaatttgtttgtggtacaaaggccatttatagattccaatt 305  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27034622 tctagtccatttcgcaaagattcttccaaacatttttttttttgacaagacattcttcccaacttgtttgtggtacaaaggccatttatagattccaatt 27034721  T
Q  306 ataaagaccaaataaaatgtttgattttgaatgtcattctcgtattattaatttcactccgtggaactctaccgaaaatgaaaaagaatagtcatttt-- 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  27034722 ataaagaccaaataaaatgtttgattttgaatgtcattctcgtattattaatttcactccgtggaactctaccgaaaatgaaaaagaatagtcattttat 27034821  T
Q  404 -actggacaagctttggatcccaataacata 433  Q
     ||||||||||||||||| ||||||||||||    
T  27034822 aactggacaagctttgga-cccaataacata 27034851  T

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