View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5015_low_15 (Length: 398)

Name: NF5015_low_15
Description: NF5015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5015_low_15
NF5015_low_15
[»] chr3 (26 HSPs)
chr3 (172-328)||(13845465-13845615)
chr3 (172-270)||(35222959-35223057)
chr3 (212-270)||(2941579-2941637)
chr3 (172-270)||(40993275-40993373)
chr3 (172-270)||(55401096-55401194)
chr3 (171-270)||(25093523-25093622)
chr3 (173-270)||(8789489-8789588)
chr3 (173-256)||(15864868-15864950)
chr3 (171-270)||(20503486-20503585)
chr3 (211-267)||(3631708-3631764)
chr3 (232-297)||(14028001-14028066)
chr3 (174-270)||(28918022-28918120)
chr3 (172-270)||(26492145-26492243)
chr3 (172-237)||(15796223-15796288)
chr3 (226-270)||(7928471-7928515)
chr3 (226-270)||(49505148-49505192)
chr3 (211-270)||(10954973-10955032)
chr3 (293-328)||(34910278-34910313)
chr3 (293-327)||(8842280-8842314)
chr3 (217-270)||(18426970-18427023)
chr3 (172-237)||(25064972-25065037)
chr3 (217-257)||(6780404-6780444)
chr3 (298-326)||(8789624-8789652)
chr3 (171-255)||(8842365-8842449)
chr3 (171-270)||(11251999-11252096)
chr3 (173-270)||(32804485-32804578)
[»] chr2 (31 HSPs)
chr2 (171-328)||(24009264-24009415)
chr2 (172-270)||(20242667-20242765)
chr2 (172-236)||(36096304-36096368)
chr2 (172-228)||(18054716-18054772)
chr2 (172-243)||(35056927-35056998)
chr2 (174-270)||(2438661-2438757)
chr2 (222-273)||(5367210-5367261)
chr2 (172-254)||(34993922-34994004)
chr2 (173-257)||(28596503-28596587)
chr2 (287-326)||(38117222-38117261)
chr2 (172-270)||(15972894-15972992)
chr2 (295-328)||(33519735-33519768)
chr2 (288-328)||(19536468-19536508)
chr2 (287-327)||(20539743-20539783)
chr2 (222-270)||(31808098-31808146)
chr2 (171-243)||(34784910-34784982)
chr2 (170-270)||(37558998-37559098)
chr2 (172-240)||(42511322-42511390)
chr2 (172-243)||(4207915-4207986)
chr2 (171-234)||(26769579-26769642)
chr2 (172-250)||(19580225-19580303)
chr2 (298-328)||(37419703-37419733)
chr2 (172-273)||(41843459-41843565)
chr2 (169-237)||(11223790-11223857)
chr2 (172-256)||(18840953-18841037)
chr2 (172-236)||(19959881-19959945)
chr2 (226-270)||(20922922-20922966)
chr2 (211-243)||(22084798-22084830)
chr2 (172-236)||(30717459-30717523)
chr2 (226-270)||(34691799-34691843)
chr2 (226-270)||(34714211-34714255)
[»] chr8 (27 HSPs)
chr8 (172-270)||(3951476-3951574)
chr8 (173-270)||(43737752-43737849)
chr8 (174-270)||(3025572-3025668)
chr8 (172-243)||(34450961-34451032)
chr8 (217-327)||(40332155-40332265)
chr8 (172-256)||(33405324-33405408)
chr8 (172-270)||(4786278-4786376)
chr8 (171-238)||(26902103-26902170)
chr8 (217-254)||(126332-126369)
chr8 (176-244)||(4122182-4122250)
chr8 (174-257)||(926730-926813)
chr8 (172-243)||(22652035-22652106)
chr8 (287-328)||(22595949-22595990)
chr8 (172-243)||(6065586-6065657)
chr8 (288-327)||(28642358-28642397)
chr8 (172-243)||(28745557-28745628)
chr8 (239-270)||(34451044-34451075)
chr8 (172-230)||(18964251-18964309)
chr8 (281-315)||(21465388-21465422)
chr8 (172-270)||(36450694-36450792)
chr8 (172-237)||(8343381-8343446)
chr8 (217-270)||(14134720-14134773)
chr8 (172-253)||(24413499-24413580)
chr8 (173-242)||(29447040-29447109)
chr8 (287-327)||(8342930-8342970)
chr8 (174-270)||(20679337-20679433)
chr8 (287-327)||(39820379-39820419)
[»] chr1 (38 HSPs)
chr1 (173-270)||(10577676-10577773)
chr1 (172-318)||(25934587-25934746)
chr1 (172-270)||(5898206-5898304)
chr1 (172-262)||(37598860-37598950)
chr1 (172-270)||(51410046-51410144)
chr1 (172-326)||(46348323-46348479)
chr1 (173-269)||(12918967-12919063)
chr1 (172-244)||(32461393-32461465)
chr1 (172-244)||(41597410-41597482)
chr1 (172-270)||(18337350-18337448)
chr1 (172-270)||(22515827-22515925)
chr1 (171-270)||(52903270-52903366)
chr1 (210-270)||(30749861-30749921)
chr1 (210-270)||(30771312-30771372)
chr1 (174-270)||(42359391-42359487)
chr1 (172-243)||(9828103-9828174)
chr1 (211-270)||(29163360-29163419)
chr1 (288-327)||(35702652-35702691)
chr1 (294-328)||(39130843-39130877)
chr1 (171-256)||(34712322-34712407)
chr1 (217-270)||(40181892-40181945)
chr1 (287-327)||(5927409-5927449)
chr1 (173-236)||(6414932-6414995)
chr1 (226-273)||(13436476-13436523)
chr1 (172-243)||(47989556-47989627)
chr1 (232-270)||(7918211-7918249)
chr1 (287-333)||(24577249-24577295)
chr1 (232-270)||(25361907-25361945)
chr1 (281-327)||(29229425-29229471)
chr1 (174-270)||(1486646-1486747)
chr1 (217-270)||(13997904-13997957)
chr1 (221-270)||(17705576-17705624)
chr1 (287-328)||(30749791-30749832)
chr1 (287-328)||(30771242-30771283)
chr1 (219-256)||(39130754-39130791)
chr1 (173-270)||(40258874-40258971)
chr1 (226-270)||(1864874-1864918)
chr1 (210-270)||(36878482-36878542)
[»] chr7 (39 HSPs)
chr7 (333-397)||(22884935-22884999)
chr7 (167-270)||(15680830-15680933)
chr7 (172-270)||(18212973-18213071)
chr7 (173-273)||(18035806-18035905)
chr7 (118-170)||(22885002-22885054)
chr7 (51-139)||(22803682-22803770)
chr7 (175-270)||(39138465-39138560)
chr7 (51-139)||(22870180-22870268)
chr7 (339-397)||(22803585-22803643)
chr7 (339-397)||(22870083-22870141)
chr7 (172-237)||(2334314-2334379)
chr7 (173-270)||(20549812-20549909)
chr7 (173-237)||(4794954-4795018)
chr7 (51-107)||(22829409-22829465)
chr7 (287-327)||(27944991-27945031)
chr7 (171-270)||(25481923-25482022)
chr7 (173-254)||(3554447-3554528)
chr7 (172-237)||(5409771-5409836)
chr7 (172-237)||(9778559-9778624)
chr7 (173-270)||(32287404-32287501)
chr7 (222-270)||(9482955-9483003)
chr7 (173-257)||(10359633-10359717)
chr7 (177-237)||(13770750-13770810)
chr7 (172-256)||(21864843-21864927)
chr7 (51-107)||(22887676-22887732)
chr7 (288-327)||(7328761-7328800)
chr7 (171-270)||(21880173-21880272)
chr7 (338-397)||(22887548-22887607)
chr7 (172-270)||(43027404-43027507)
chr7 (172-254)||(598245-598327)
chr7 (180-270)||(41020517-41020607)
chr7 (173-242)||(11665370-11665439)
chr7 (222-270)||(640134-640182)
chr7 (214-270)||(5835268-5835324)
chr7 (173-257)||(22484059-22484143)
chr7 (51-107)||(22874305-22874361)
chr7 (171-243)||(24339701-24339773)
chr7 (202-270)||(26733325-26733393)
chr7 (287-327)||(43027538-43027578)
[»] chr6 (38 HSPs)
chr6 (172-254)||(33001229-33001311)
chr6 (172-270)||(13789175-13789273)
chr6 (172-270)||(13797794-13797892)
chr6 (172-270)||(18367857-18367966)
chr6 (171-270)||(34595155-34595254)
chr6 (173-270)||(9658900-9658998)
chr6 (220-270)||(7740662-7740712)
chr6 (175-256)||(32978842-32978923)
chr6 (172-270)||(16488519-16488628)
chr6 (172-270)||(17327590-17327693)
chr6 (172-270)||(13360313-13360410)
chr6 (172-270)||(24645502-24645600)
chr6 (172-270)||(28152119-28152217)
chr6 (173-270)||(17841530-17841627)
chr6 (222-270)||(19040373-19040421)
chr6 (171-270)||(8101106-8101205)
chr6 (174-237)||(12696383-12696446)
chr6 (215-254)||(30851637-30851676)
chr6 (169-270)||(7378000-7378101)
chr6 (172-256)||(6898221-6898305)
chr6 (174-270)||(7265535-7265631)
chr6 (287-327)||(8365588-8365628)
chr6 (172-270)||(8776908-8777011)
chr6 (293-328)||(10649277-10649312)
chr6 (172-243)||(16766756-16766827)
chr6 (293-327)||(853934-853968)
chr6 (172-270)||(7977770-7977868)
chr6 (175-270)||(7996325-7996416)
chr6 (175-270)||(8022385-8022476)
chr6 (172-270)||(32511606-32511704)
chr6 (172-237)||(9629448-9629513)
chr6 (285-330)||(26402749-26402794)
chr6 (173-238)||(31384983-31385048)
chr6 (172-252)||(4877982-4878061)
chr6 (287-327)||(6389693-6389733)
chr6 (177-237)||(24138485-24138545)
chr6 (218-270)||(28715316-28715368)
chr6 (218-270)||(29020933-29020985)
[»] chr5 (28 HSPs)
chr5 (176-255)||(30098982-30099061)
chr5 (173-243)||(6401557-6401627)
chr5 (172-270)||(21576685-21576783)
chr5 (172-270)||(42029773-42029871)
chr5 (172-243)||(21814320-21814391)
chr5 (172-270)||(28588614-28588712)
chr5 (287-328)||(22013363-22013404)
chr5 (287-327)||(2436878-2436918)
chr5 (172-244)||(16304366-16304438)
chr5 (175-243)||(19452998-19453066)
chr5 (287-327)||(19820463-19820503)
chr5 (174-270)||(21190998-21191094)
chr5 (174-270)||(30502330-30502426)
chr5 (174-270)||(30542673-30542769)
chr5 (172-243)||(21522809-21522880)
chr5 (172-243)||(21533375-21533446)
chr5 (211-257)||(26312803-26312849)
chr5 (212-254)||(32630715-32630757)
chr5 (172-270)||(43564902-43565000)
chr5 (217-270)||(18421826-18421879)
chr5 (172-240)||(40000493-40000561)
chr5 (239-270)||(21814282-21814313)
chr5 (211-254)||(23012387-23012430)
chr5 (172-243)||(39698600-39698671)
chr5 (222-270)||(15884009-15884057)
chr5 (287-327)||(37328913-37328953)
chr5 (175-247)||(39268541-39268613)
chr5 (239-304)||(39758259-39758324)
[»] scaffold0361 (1 HSPs)
scaffold0361 (169-326)||(14498-14649)
[»] chr4 (29 HSPs)
chr4 (172-270)||(5414101-5414210)
chr4 (172-270)||(35161057-35161155)
chr4 (172-270)||(19097835-19097932)
chr4 (172-270)||(23292926-23293024)
chr4 (171-270)||(49431047-49431146)
chr4 (173-243)||(30982808-30982878)
chr4 (171-256)||(2361914-2361999)
chr4 (217-270)||(54580008-54580061)
chr4 (171-270)||(34306743-34306842)
chr4 (173-243)||(12323968-12324038)
chr4 (172-242)||(24613630-24613700)
chr4 (172-270)||(28964188-28964286)
chr4 (171-270)||(36635345-36635450)
chr4 (286-323)||(482299-482336)
chr4 (222-270)||(10499260-10499308)
chr4 (214-270)||(36509074-36509130)
chr4 (222-270)||(40179626-40179674)
chr4 (211-270)||(8402721-8402780)
chr4 (211-270)||(12797317-12797376)
chr4 (286-325)||(15835701-15835740)
chr4 (172-243)||(46083920-46083991)
chr4 (172-270)||(4672025-4672123)
chr4 (293-327)||(7251696-7251730)
chr4 (172-270)||(16073415-16073513)
chr4 (173-263)||(20950368-20950458)
chr4 (172-270)||(35157925-35158023)
chr4 (211-257)||(38846991-38847037)
chr4 (299-328)||(23700420-23700449)
chr4 (172-248)||(23861369-23861445)
[»] scaffold0623 (1 HSPs)
scaffold0623 (173-270)||(5926-6034)
[»] scaffold0083 (1 HSPs)
scaffold0083 (171-257)||(45469-45555)
[»] scaffold0652 (1 HSPs)
scaffold0652 (173-270)||(403-500)
[»] scaffold0053 (1 HSPs)
scaffold0053 (171-256)||(8833-8918)
[»] scaffold0050 (1 HSPs)
scaffold0050 (211-270)||(70299-70358)
[»] scaffold0022 (1 HSPs)
scaffold0022 (172-270)||(90864-90962)
[»] scaffold0019 (1 HSPs)
scaffold0019 (287-328)||(71678-71719)
[»] scaffold0475 (1 HSPs)
scaffold0475 (172-256)||(3343-3427)
[»] scaffold0223 (1 HSPs)
scaffold0223 (288-327)||(20122-20161)
[»] scaffold0512 (1 HSPs)
scaffold0512 (172-254)||(4976-5058)
[»] scaffold0116 (1 HSPs)
scaffold0116 (232-270)||(9919-9957)
[»] scaffold0003 (1 HSPs)
scaffold0003 (171-237)||(241659-241725)
[»] scaffold0306 (2 HSPs)
scaffold0306 (174-243)||(13454-13523)
scaffold0306 (287-327)||(13350-13390)
[»] scaffold0171 (1 HSPs)
scaffold0171 (287-328)||(23370-23410)
[»] scaffold0152 (2 HSPs)
scaffold0152 (174-243)||(21804-21873)
scaffold0152 (287-327)||(21937-21977)
[»] scaffold0066 (1 HSPs)
scaffold0066 (294-327)||(33431-33464)


Alignment Details
Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 172 - 328
Target Start/End: Original strand, 13845465 - 13845615
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgatttc 271  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T
Q  272 ctnnnnnnnttagctgtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||       ||| ||||||||||||      | ||||||||||||||||||||||||    
T  13845565 ctaaaaaatttaactgtgtcggtgt------ccgtgtccgtatccgtgcttcataga 13845615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 35223057 - 35222959
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||| | ||||||  |||||  |||||||||||||||||| |||||||||| |||||||||||||||| || ||| ||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattt 35222959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 2941637 - 2941579
Alignment:
Q  212 tgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgattt 2941579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 40993275 - 40993373
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||| |||||||| | |||| || |||||  | ||||| |||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 40993373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 55401194 - 55401096
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||| | |||| || ||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||||  ||| ||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 55401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 25093622 - 25093523
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||| |||||||| ||||||||  ||| ||| ||| ||| ||||| |||| |||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  25093622 tctaagaagcacgaacactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattt 25093523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 8789489 - 8789588
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgt--cgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| | |||| || ||||| || ||||| |||| ||||  |||||||||||| ||||||||||||||||| | ||| ||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 15864950 - 15864868
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtc-gtgtccgacactgacacatataattacact 256  Q
    ||||||||||||||||||||||||| || |||| | |||||||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  15864950 tatgaagcacggacactctttggattaggcgtg-tcccgtgtcagacacgtgtcggtgtccgacac-gacacctatgattacact 15864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 20503585 - 20503486
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||| | |||| || |||||  | |||||||||| ||||||||||| |||| ||||| | ||||||||||| ||| ||| ||||    
T  20503585 tctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattt 20503486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 3631764 - 3631708
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtga 267  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||| ||| |||||    
T  3631764 gtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 14028066 - 14028001
Alignment:
Q  232 cgacactgacacatataattacactgcattttgtgatttcctnnnnnnnttagctgtgtcggtgtc 297  Q
    |||||| |||||||||||||||||||||||||||||||| ||       |||||||||||||||||    
T  14028066 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggtgtc 14028001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 28918120 - 28918022
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtc--cgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||| |||||||| |||||| || |||||  | ||||| |||||||||||||||  |||||| ||||| | ||||||||||| ||| ||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattt 28918022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 26492145 - 26492243
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||| |||||| || | |||| |||||||| |  |||||||||| |||||||||||||||| || || | ||||||||||| ||| | ||||||    
T  26492145 ctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattt 26492243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 15796223 - 15796288
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    |||||||||||| ||||||||||||| || |||||| | ||||  ||||||||| |||||||||||    
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacac 15796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 7928515 - 7928471
Alignment:
Q  226 cgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattt 7928471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 49505148 - 49505192
Alignment:
Q  226 cgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattt 49505192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 10955032 - 10954973
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||| ||||||||||||||||||||| ||||| | | ||||||||| ||| ||||||||    
T  10955032 gtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattt 10954973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 34910313 - 34910278
Alignment:
Q  293 gtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    |||||||||| |||||||||||||||||||||||||    
T  34910313 gtgtcgtgtctggtgtccgtatccgtgcttcataga 34910278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 327
Target Start/End: Complemental strand, 8842314 - 8842280
Alignment:
Q  293 gtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||||| |||||||||||||||||||||||||||    
T  8842314 gtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 18427023 - 18426970
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| |||||||| |||| |||||||||||| | ||| ||||||||    
T  18427023 gacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattt 18426970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 25065037 - 25064972
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    ||||| |||||| |||||| | ||||||  |||||  | |||||||||||||||||||||||||||    
T  25065037 ctatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacac 25064972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 6780404 - 6780444
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    ||||||||| |||||||||||  ||||||||||||||||||    
T  6780404 gacacgtgttgtgtccgacaccaacacatataattacactg 6780444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 326
Target Start/End: Original strand, 8789624 - 8789652
Alignment:
Q  298 gtgtccggtgtccgtatccgtgcttcata 326  Q
    |||||||||||||||||||||||||||||    
T  8789624 gtgtccggtgtccgtatccgtgcttcata 8789652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 8842449 - 8842365
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacac 255  Q
    |||||||||||||||||||| | |||| || ||||| ||  | ||  ||| |||||||||| ||||| |||| ||||||||||||    
T  8842449 tctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacac 8842365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 11252096 - 11251999
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| ||||||| | |||| || |||||| |  || | ||||||||| ||||| ||||| |||||  |||||||||||| ||| ||||||||    
T  11252096 tctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac--ataattacactgaattatgtgattt 11251999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 32804485 - 32804578
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| |  ||| || ||| |||| ||| | |||| |||||||||||||    ||||||||||||||||||  ||| ||||||||    
T  32804485 tatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgtccga----gacacatataattacactaaattatgtgattt 32804578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 171 - 328
Target Start/End: Complemental strand, 24009415 - 24009264
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata-atttacactgcattttgtgattt 24009317  T
Q  271 cctnnnnnnnttagctgtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
     ||       |||||||||||   | ||||||  ||||||||||||||||||||||||    
T  24009316 tctaaaaaaattagctgtgtc---gccgtgtc--gtgtccgtatccgtgcttcataga 24009264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 20242667 - 20242765
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| ||||||||| ||||||| |||||   |||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattt 20242765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 36096304 - 36096368
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 236  Q
    |||||||||||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||    
T  36096304 ctatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 36096368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 18054716 - 18054772
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgt 228  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  18054716 ctatgaagcacggacattccttggataaggcgtgtttccgtgtcagacacgtgtcgt 18054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 35056998 - 35056927
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| |  ||| || |||||||||||||| ||||||||||||||||||||| |||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 2438661 - 2438757
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||| | |||| || |||||  | ||||| |||| |||||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 2438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 5367261 - 5367210
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgatttcct 273  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  5367261 gtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcct 5367210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 34993922 - 34994004
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    |||||||||||| |||||| ||| || || |||||  | ||||| ||||| |||||||| |||||||||||||||||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattaca 34994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 28596587 - 28596503
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    |||||||||||||||||| | |||| ||  ||||    ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactg 28596503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 38117222 - 38117261
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcata 326  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  38117222 gtgtcagtgtcgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 15972992 - 15972894
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||| |||| |||| ||  ||||  | | ||| ||||||||||||||||||||| ||||| | ||||||||||| ||| ||| ||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattt 15972894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 328
Target Start/End: Complemental strand, 33519768 - 33519735
Alignment:
Q  295 gtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||||||||||||||||||||||||||||||||    
T  33519768 gtcgtgtccggtgtccgtatccgtgcttcataga 33519735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 19536468 - 19536508
Alignment:
Q  288 tgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  19536468 tgtccgtgtcgtgtccggtgtccgtatctgtgcttcataga 19536508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 20539743 - 20539783
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  20539743 gtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 31808146 - 31808098
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||| | |||||||||||||||||||||||| ||| ||||||||    
T  31808146 gtgtcgtgttcaacactgacacatataattacactgaattatgtgattt 31808098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 34784910 - 34784982
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||||| ||||||| | | ||||| |||||  |||||||||||| ||||||||||||| || |||||    
T  34784910 tctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacac 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 37559098 - 37558998
Alignment:
Q  170 ttctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgatt 269  Q
    ||||||||||||||||||||| | |||| |  |||||  | ||||| ||||||||||  ||||||||| ||||| | |||||||| || ||| |||||||    
T  37559098 ttctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatt 37558999  T
Q  270 t 270  Q
    |    
T  37558998 t 37558998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 42511322 - 42511390
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactga 240  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| ||||||||| ||||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacactga 42511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 4207986 - 4207915
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||| || | |||||||| |||| | ||||||||| |||||  |||||||||||||||||||| |||||    
T  4207986 ctatgaaacatgaacactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacac 4207915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 26769642 - 26769579
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccga 234  Q
    |||||||||||||||||||| | |||| || |||||  | ||||| ||||||||||||||||||    
T  26769642 tctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 26769579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 19580225 - 19580303
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataat 250  Q
    ||||||||||| ||||||||| |||| ||| ||||||  ||||  ||||||||| ||||||||||| || || ||||||    
T  19580225 ctatgaagcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtccgacaccgatacttataat 19580303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 328
Target Start/End: Complemental strand, 37419733 - 37419703
Alignment:
Q  298 gtgtccggtgtccgtatccgtgcttcataga 328  Q
    |||||||||||||||||||||||||||||||    
T  37419733 gtgtccggtgtccgtatccgtgcttcataga 37419703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 273
Target Start/End: Complemental strand, 41843565 - 41843459
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacact-----gacacatataattacactgcattttgtg 266  Q
    ||||||||||| ||||||| | ||||||  |||||  ||||||| ||||||||||| |||||||||      |||||||||||||| || | ||| ||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtg 41843466  T
Q  267 atttcct 273  Q
    |||||||    
T  41843465 atttcct 41843459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 11223790 - 11223857
Alignment:
Q  169 attctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    |||||||||||||||||||||| |  ||| || |||||  | |||||||||| ||||||||||||||||    
T  11223790 attctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacac 11223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 18840953 - 18841037
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    ||||||||||||||||||| | |||| ||  ||||  | ||||| |||| |||||||||| ||||| ||||| | ||||||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacact 18841037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 19959945 - 19959881
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 236  Q
    ||||||||||| || ||||||||||| ||||| || || ||||| ||||| ||||||||| ||||    
T  19959945 ctatgaagcaccgatactctttggattagacgcgtctcggtgtcggacacttgtcgtgtctgaca 19959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 20922922 - 20922966
Alignment:
Q  226 cgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| ||||||||||||||||||  ||| ||||||||    
T  20922922 cgtgtccgacacagacacatataattacactaaattatgtgattt 20922966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 22084798 - 22084830
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||| |||||||||||||||||    
T  22084798 gtgtcagacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 30717459 - 30717523
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 236  Q
    ||||||||||||||||||| |||||| || ||| |  | |||||  |||||||||||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgaca 30717523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 34691799 - 34691843
Alignment:
Q  226 cgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| ||||||||||||||||||| ||| | ||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattt 34691843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 34714211 - 34714255
Alignment:
Q  226 cgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| ||||||||||||||||||| ||| | ||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattt 34714255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 3951476 - 3951574
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||| |||| |||||| || |||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgattt 3951574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 43737752 - 43737849
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| ||||||||| ||| |  ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattt 43737849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 3025668 - 3025572
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||| | |||| || |||||  | ||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattt 3025572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 34450961 - 34451032
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| |||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 40332265 - 40332155
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgatttcctnnnnnnnttagctgtgtcggtgtcgtgtccggtgtccgtatcc 316  Q
    |||||||||||||||| |||| ||||| | ||||||||||| ||| |||||||| ||       || || ||||| ||||||||||||||||||||||||    
T  40332265 gacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatttgcagtgtccgtgtcgtgtccggtgtccgtatcc 40332166  T
Q  317 gtgcttcatag 327  Q
    |||||||||||    
T  40332165 gtgcttcatag 40332155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 33405324 - 33405408
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    ||||| ||||||||||||| |||||| || |||||    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacact 33405408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 4786278 - 4786376
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||||||| ||||| | ||| ||  | ||  |||| |||||| |||||||| ||||||||||||||||||| ||| ||||||||    
T  4786278 ctatgaagcacggacactctttgaataagccatgtctcgttatcgaacacatgtcgtatccgacaccgacacatataattacactgaattatgtgattt 4786376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 26902103 - 26902170
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacact 238  Q
    |||||||||||||||||||| |  |||||| |||||  ||||| ||||||||||||||||||||||||    
T  26902103 tctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacact 26902170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 126332 - 126369
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    ||||||||||||||||||||||||||||||||||||||    
T  126332 gacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 4122182 - 4122250
Alignment:
Q  176 gaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 244  Q
    |||||||||||||||||||||| ||||||||| | |||||  |||||||||||||  |||| |||||||    
T  4122182 gaagcacggacactctttggattagacgtgttccggtgtccaacacgtgtcgtgtttgacattgacaca 4122250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 926730 - 926813
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    ||||||||||||||||| | ||||||  | |||  | ||||| ||||||||||| ||||||||| ||||| |||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactg 926813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 22652106 - 22652035
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| | |||| ||||||||  | ||||| ||||| ||||||||||||||| |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 22595990 - 22595949
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  22595990 gtgtcagtgttgtgtccggtgtccgtatccgtgcttcataga 22595949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 6065586 - 6065657
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| ||| || |  |||||| | ||||| |||| ||||||||||||||| ||||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacac 6065657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 28642397 - 28642358
Alignment:
Q  288 tgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  28642397 tgtccgtgtcgtgtccgatgtccgtatccgtgcttcatag 28642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 28745628 - 28745557
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| ||| || |||| ||| || ||| | |||| |||||||||||||||| |||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacac 28745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 270
Target Start/End: Original strand, 34451044 - 34451075
Alignment:
Q  239 gacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||||||||||||||||    
T  34451044 gacacatataattacactgcattttgtgattt 34451075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 18964309 - 18964251
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgt 230  Q
    ||||||||||| ||||||| | ||||||| ||||| ||||||| ||||| |||||||||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgt 18964251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 315
Target Start/End: Complemental strand, 21465422 - 21465388
Alignment:
Q  281 ttagctgtgtcggtgtcgtgtccggtgtccgtatc 315  Q
    ||||||||||| |||||||||||||||||||||||    
T  21465422 ttagctgtgtccgtgtcgtgtccggtgtccgtatc 21465388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 36450694 - 36450792
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| ||||||| | |||| || |||||    ||||| |||||| ||||||||||||||  |||| | ||||||||||| ||| ||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattt 36450792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 8343446 - 8343381
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    ||||||||||| ||||||||| |||| || |||||  | ||||| ||||||||||||||| |||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 14134773 - 14134720
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||  ||||| |||| |||||||||||||| ||| ||||||||    
T  14134773 gacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattt 14134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 24413499 - 24413580
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattac 253  Q
    ||||||||||||||||||  | |||| ||||||||  |  |||  ||||||  ||||||||||||||||||| |||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattac 24413580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 29447040 - 29447109
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgaca 242  Q
    |||||||||||||||||| | |||| || |||||    ||||||||||| ||||||||||||||| ||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 8342970 - 8342930
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| |||||||||||| ||||||| ||||||||||||||    
T  8342970 gtgtcagtgtcgtgtccgatgtccgtgtccgtgcttcatag 8342930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 20679337 - 20679433
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||| |||||||| | || |||| |||||  | ||||| ||||||||| | ||| ||||| ||||| ||||||||||||| | | ||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattt 20679433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 39820419 - 39820379
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||||||||||||||| || ||||||||||||||    
T  39820419 gtgtctgtgtcgtgtccggtgtctgtgtccgtgcttcatag 39820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 10577676 - 10577773
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| ||||||||| |||||  |||||||||||||| |||||||||| | | ||||||||||||||||||||||||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattt 10577773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 318
Target Start/End: Complemental strand, 25934746 - 25934587
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgac-----------actgacacatataattacactgcat 260  Q
    ||||||||||||||||||| ||||||||| ||| |  |||||||||||||||||||||||||||           || ||||||||||||||||||| ||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtat 25934647  T
Q  261 tttgtgatttcctnnnnnnnttagctgtgtcg--gtgtcgtgtccggtgtccgtatccgt 318  Q
    |||||||||| ||       ||||||||||||  ||||| |||||||||||||| |||||    
T  25934646 tttgtgattttctagaaaatttagctgtgtcggcgtgtcatgtccggtgtccgtgtccgt 25934587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 5898206 - 5898304
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||| |||||||||||||| | |||| ||||||||  | ||||  ||||||||||||||| ||||| ||| ||||||||||||||| ||| ||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattt 5898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 262
Target Start/End: Complemental strand, 37598950 - 37598860
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattt 262  Q
    ||||||||||||||||||| | |||| || |||||  |  |||| ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattt 37598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 51410144 - 51410046
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| | |||| |||||| || ||||| || ||||| || |||||||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 51410046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 326
Target Start/End: Original strand, 46348323 - 46348479
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgatttc 271  Q
    ||||||||||||||||| | | |||| || ||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||||  ||| | ||||||     
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatttt 46348422  T
Q  272 ctnnnnnnnttagctgtgtcg--gtgtc-gtgtccggtgtccgtatccgtgcttcata 326  Q
     |       ||||||||||||  ||||| |||||| ||||||||||||||||||||||    
T  46348423 ttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtatccgtgcttcata 46348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 269
Target Start/End: Complemental strand, 12919063 - 12918967
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgatt 269  Q
    ||||||||||| |||||  | ||||||| |||||  |||||||||||||||||||||||||| ||  ||||||||||| ||| || ||| |||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 32461393 - 32461465
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 244  Q
    ||||||||||||||||||  |||||| || |||||  | ||||||||||||||||||||||||||| ||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 41597410 - 41597482
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 244  Q
    ||||||||||| ||||||| ||||||||  ||| |  ||||||||||||||||||||||||||||| ||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacaca 41597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 18337448 - 18337350
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||| | |||| || | |||  | ||||| ||||||||| ||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattt 18337350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 22515827 - 22515925
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||| | |||| || ||||| || ||||| || | |||||||||||||||| ||||| | ||||||||||  ||| ||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 22515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 52903366 - 52903270
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||||| | ||||| |||||  | ||||| |||||    |||||||||||| ||||||||||||||||||| ||| | ||||||    
T  52903366 tctatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacaca---cgtgtccgacaccgacacatataattacactgaattatatgattt 52903270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 30749921 - 30749861
Alignment:
Q  210 cgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||| |||| ||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  30749921 cgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgattt 30749861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 30771372 - 30771312
Alignment:
Q  210 cgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||| |||| ||| ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  30771372 cgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgattt 30771312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 42359391 - 42359487
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||| | |||| || |||||  | ||||| |||||  ||| |||||||||| ||||| | ||||||||||| ||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattt 42359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 9828174 - 9828103
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| | |||| ||||||||  | ||||| ||||||||||||||| ||||| |||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 29163360 - 29163419
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | || ||| ||||||||    
T  29163360 gtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattt 29163419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 35702652 - 35702691
Alignment:
Q  288 tgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  35702652 tgtcagtgtcgtgtccggtgtccgtatccgtgcttcatag 35702691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 328
Target Start/End: Original strand, 39130843 - 39130877
Alignment:
Q  294 tgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    |||||||||||||||||||||||||||||||||||    
T  39130843 tgtcgtgtccggtgtccgtatccgtgcttcataga 39130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 34712322 - 34712407
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    |||||||||||||||||||| ||| || ||||||||  | ||||  ||||||||||     |||||||||||||||||||||||||    
T  34712322 tctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacact 34712407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 40181945 - 40181892
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||| ||||||||    
T  40181945 gacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattt 40181892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 5927409 - 5927449
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  5927409 gtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 6414932 - 6414995
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgaca 236  Q
    |||||||||||||||||| | |||| | | ||||  | ||||||||||||||||||||||||||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgaca 6414995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 13436523 - 13436476
Alignment:
Q  226 cgtgtccgacactgacacatataattacactgcattttgtgatttcct 273  Q
    ||||||||||||  |||||||||||||||||| ||| |||||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgatttcct 13436476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 47989627 - 47989556
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| | |||| || |||||  |  ||||||||| |||||||||||||||| |||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 270
Target Start/End: Original strand, 7918211 - 7918249
Alignment:
Q  232 cgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  7918211 cgacactgacacatataattacactgaattatgtgattt 7918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 24577249 - 24577295
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatagagtaga 333  Q
    ||||| ||||||||| | ||||||||||||||||||||||| |||||    
T  24577249 gtgtccgtgtcgtgttcagtgtccgtatccgtgcttcatagtgtaga 24577295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 25361945 - 25361907
Alignment:
Q  232 cgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattt 25361907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 29229471 - 29229425
Alignment:
Q  281 ttagctgtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||||||    
T  29229471 ttagcagtgtcagtgtcgtgtccagtgtccgtatctgtgcttcatag 29229425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 1486646 - 1486747
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacact-----gacacatataattacactgcattttgtgat 268  Q
    ||||||||| ||||||| | |||| || |||||  | ||||| |||||||||||||||||||||      ||||| ||||||||||||| ||| ||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  269 tt 270  Q
    ||    
T  1486746 tt 1486747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 13997957 - 13997904
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||| ||||||| ||| |||| ||||||||||||||||||| ||| ||||||||    
T  13997957 gacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgattt 13997904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 17705576 - 17705624
Alignment:
Q  221 cgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  17705576 cgtgtcgcgtccgacac-gacacatataattacactgaattatgtgattt 17705624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 30749832 - 30749791
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||| |||||||||||||||||||||||| |||||| ||||    
T  30749832 gtgtccgtgtcgtgtccggtgtccgtatccatgcttcgtaga 30749791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 30771283 - 30771242
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||| |||||||||||||||||||||||| |||||| ||||    
T  30771283 gtgtccgtgtcgtgtccggtgtccgtatccatgcttcgtaga 30771242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 39130754 - 39130791
Alignment:
Q  219 cacgtgtcgtgtccgacactgacacatataattacact 256  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  39130754 cacgtgttgtgtccgacaccgacacatataattacact 39130791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 40258874 - 40258971
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||| |||||||| | |||| || |||||    ||||| |||| |||||||||| ||||| ||||| | ||||||||||| ||| ||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattt 40258971  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 1864874 - 1864918
Alignment:
Q  226 cgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||| |||| ||||||||||||||||||| ||| ||||||||    
T  1864874 cgtgtccaacaccgacacatataattacactgaattatgtgattt 1864918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 36878542 - 36878482
Alignment:
Q  210 cgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||| |||| || ||||||| ||||| ||||| ||||||||||||| ||| ||||||||    
T  36878542 cgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattt 36878482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 22884999 - 22884935
Alignment:
Q  333 atctaagagactacagttattattcaacaatattaaagagattcaaagggtaaacaaagaaataa 397  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  22884999 atctaagagactacagttattattcagcaatatcaaagagattcaaagggtaaacaaagaaataa 22884935  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 15680933 - 15680830
Alignment:
Q  167 agattctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtg 266  Q
    |||| ||||||||||||||||||| | | || |||||||| || ||||| ||||||||||||||||||||| ||||| ||||||||||||  ||| ||||    
T  15680933 agatcctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtg 15680834  T
Q  267 attt 270  Q
    ||||    
T  15680833 attt 15680830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 18212973 - 18213071
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| ||||||| | ||||||| |||||  |||||||||| | | |||||||||||||| ||||||||||||||||||  ||| ||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgattt 18213071  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 273
Target Start/End: Original strand, 18035806 - 18035905
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgatttcc 272  Q
    |||||||||||||||||| | |||| ||||||||| |||||||||||| ||||| | ||  |||||||||||| ||||||| ||| ||| ||||||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgtt-ccgtgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatgtgatttcc 18035904  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 22885054 - 22885002
Alignment:
Q  118 gttctgattttgcatatactttgttttgtccaagttttatctattgagtagat 170  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  22885054 gttctgattttgcatatactttactttgtccaagttttatctattgagtagat 22885002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 22803770 - 22803682
Alignment:
Q  51 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcattnnnnnnntttgttctgattttgcatatacttt 139  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||| |||| |||||       ||| |||||||||||||||||||||    
T  22803770 aagtgaaatcatgattgagtagataatttaatagatacatgaaagctttttttcattaaactcttttcttctgattttgcatatacttt 22803682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 39138560 - 39138465
Alignment:
Q  175 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||| || |||||| ||||||| |||||  |||||| ||||| || ||||||||||||| |||| |||||||||||||| ||| ||||||||    
T  39138560 tgaagcacagatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattt 39138465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 22870268 - 22870180
Alignment:
Q  51 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcattnnnnnnntttgttctgattttgcatatacttt 139  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||  |||| |||||       ||| |||||||||||||||||||||    
T  22870268 aagtgaaatcatgattgagtagataatttaatagatacatgaaagttttttttcattaaactcttttcttctgattttgcatatacttt 22870180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 22803643 - 22803585
Alignment:
Q  339 gagactacagttattattcaacaatattaaagagattcaaagggtaaacaaagaaataa 397  Q
    ||||||||| ||||||||||  ||||| | |||||||||||||||||||||||||||||    
T  22803643 gagactacaattattattcagtaatatcatagagattcaaagggtaaacaaagaaataa 22803585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 22870141 - 22870083
Alignment:
Q  339 gagactacagttattattcaacaatattaaagagattcaaagggtaaacaaagaaataa 397  Q
    ||||||||| ||||||||||  ||||| | |||||||||||||||||||||||||||||    
T  22870141 gagactacaattattattcagtaatatcatagagattcaaagggtaaacaaagaaataa 22870083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 2334379 - 2334314
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    ||||||| ||||||||||| | |||| ||||||||||| ||||| |||| ||||||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 20549909 - 20549812
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| ||||| | |||| || ||||| ||  |||| |||| |||| ||||||||||| ||||||||||||||||||| |||  |||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattt 20549812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 4795018 - 4794954
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    |||||||||| ||||||  |||||| ||||||||||  |||||||| ||||||||||||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacac 4794954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 22829465 - 22829409
Alignment:
Q  51 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcatt 107  Q
    ||||||| ||||| ||||||||||| || ||||| ||||||||||||||||||||||    
T  22829465 aagtgaattcatgcttgagtaaatagtttaatagttacatgaaagcattttctcatt 22829409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 27945031 - 27944991
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27945031 gtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 25482022 - 25481923
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||| |||||||| || |  ||||||||  |||| ||||| | |||||||||||||  |||| | ||||||||||| ||| ||||||||    
T  25482022 tctatgaagcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattt 25481923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 3554447 - 3554528
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    |||||||||| ||||||||| | || |||||||| || |||| ||| | |||||||||||||||| ||||  ||||||||||    
T  3554447 tatgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacatctataattaca 3554528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 5409771 - 5409836
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| |||||||||||||||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 9778624 - 9778559
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    ||||||||||||||||||| |||||| || |||||  | ||||| ||||||||| |||||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 32287404 - 32287501
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| | |||| ||  ||||  | ||||| ||||| |||| |||||||||| |||||||||| || ||||| ||| ||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattt 32287501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 9483003 - 9482955
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattt 9482955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 10359717 - 10359633
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    ||||||||||||||||  || |||| |||||||| || ||||| |||||  ||||| |||||||  ||||| |||||||||||||    
T  10359717 tatgaagcacggacacctttcggattagacgtgtctcggtgtcggacacaagtcgtatccgacatcgacacctataattacactg 10359633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  177 aagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    |||||||||||||||| |||| || |||||| | ||||| ||||||||| |||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 21864927 - 21864843
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    ||||||||||| ||||||| | | || ||||||||  | ||||| ||||||||||||||||||||  ||||| | ||||||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacact 21864843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 22887732 - 22887676
Alignment:
Q  51 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcatt 107  Q
    ||||||||||||||||||||||||  || ||||| ||||| ||| ||||||||||||    
T  22887732 aagtgaaatcatgtttgagtaaatggtttaatagttacataaaatcattttctcatt 22887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 7328761 - 7328800
Alignment:
Q  288 tgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  7328761 tgtctgtgtcgtgttcggtgtccgtatccgtgcttcatag 7328800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 21880272 - 21880173
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||  | |||| || |||||    ||||| |||| |||||||||||||||| ||||| | ||||||||||| ||| ||| ||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattt 21880173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 22887607 - 22887548
Alignment:
Q  338 agagactacagttattattcaacaatattaaagagattcaaagggtaaacaaagaaataa 397  Q
    |||||||||| ||||| ||||  ||||| | ||||||||||||||||||| |||||||||    
T  22887607 agagactacaattattgttcagtaatatcacagagattcaaagggtaaactaagaaataa 22887548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 43027404 - 43027507
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtc-----cgacactgacacatataattacactgcattttgtg 266  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| |||||||||||||||     |||||| ||||| | || |||||||||||| ||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtg 43027503  T
Q  267 attt 270  Q
    ||||    
T  43027504 attt 43027507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 598327 - 598245
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    ||||||||||||||||||  | |||| || |||||  | ||||| ||||||||||||||| ||||| ||||| || |||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattaca 598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 41020607 - 41020517
Alignment:
Q  180 cacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||| ||||||||| ||||||||  | |||| ||| | ||||||||| | |||| ||| ||||||||||||||  ||| ||||||||    
T  41020607 cacggacattctttggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgattt 41020517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 11665370 - 11665439
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgaca 242  Q
    ||||||||||||||| || | | || ||| ||||||| ||||| |||||||||||||| |||||| ||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgaca 11665439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 640182 - 640134
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||| || ||||| ||||||||||||||||||| ||| ||||||||    
T  640182 gtgtcgtatctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 5835324 - 5835268
Alignment:
Q  214 tcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||| |||| |||| ||||| ||||||||||||||||||| ||| ||| ||||    
T  5835324 tcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattt 5835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 22484143 - 22484059
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    |||||||||||||||||  | |||| |||| ||| ||  |||| |||| ||||| |||| ||||| |||||||||||||| ||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactg 22484059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 22874361 - 22874305
Alignment:
Q  51 aagtgaaatcatgtttgagtaaataattaaatagatacatgaaagcattttctcatt 107  Q
    ||||||| |||||||||||||| || || ||||||||||| ||||| ||| ||||||    
T  22874361 aagtgaattcatgtttgagtaagtagtttaatagatacatcaaagcttttactcatt 22874305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 24339773 - 24339701
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||||||| ||||| | |||| || |||||  | ||||| || |||||||||||||||||| |||||    
T  24339773 tctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 26733393 - 26733325
Alignment:
Q  202 cgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||| |||| || |||| | |||||||||||||| ||||||| |||||| |||| ||| ||||||||    
T  26733393 cgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattt 26733325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 43027538 - 43027578
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||||||||| ||||||| |||||||||||||||    
T  43027538 gtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 33001229 - 33001311
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    |||||||||||  ||||||||||||| || ||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  33001229 ctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 33001311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 13789273 - 13789175
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| |||||| ||| ||||| ||| |  || ||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||    
T  13789273 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgattt 13789175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 13797892 - 13797794
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| |||||| ||| ||||| ||| |  || ||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||    
T  13797892 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgattt 13797794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 18367966 - 18367857
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtc-----------cgacactgacacatataattacactgcat 260  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||||||| ||||||||||           |||||| ||||||||||||||||||||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcat 18367867  T
Q  261 tttgtgattt 270  Q
    ||||||||||    
T  18367866 tttgtgattt 18367857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 34595254 - 34595155
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||| | |||| ||  ||||  | ||||||||||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  34595254 tctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 34595155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 9658998 - 9658900
Alignment:
Q  173 tatgaagcacggacactctttgga-taagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| ||||| | || |||||| | |||||||||||||||||||||  |||| |||| |||||||||||||| ||| ||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattt 9658900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 7740712 - 7740662
Alignment:
Q  220 acgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  7740712 acgtgtcgtgtccgacactgacacatataattacactcaattttgtgattt 7740662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 32978842 - 32978923
Alignment:
Q  175 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    |||||||||||||||| |||||| ||||||||  | ||||| |||| |||||||||||||||| ||||| | ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacact 32978923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 16488519 - 16488628
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgaca-----------catataattacactgcat 260  Q
    |||||||||||| ||| || ||||||||| |||||  ||||| ||||||||||||||||||||||| ||||           ||||||||||||||||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcat 16488618  T
Q  261 tttgtgattt 270  Q
    ||||||||||    
T  16488619 tttgtgattt 16488628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 17327590 - 17327693
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtc-----cgacactgacacatataattacactgcattttgtg 266  Q
    ||||||||||||||||||| | |||| || |||||  | |||||||||||||||||||||     ||||||||||||||||| |||||||  ||| ||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtg 17327689  T
Q  267 attt 270  Q
    ||||    
T  17327690 attt 17327693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 13360313 - 13360410
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||||| |||| || ||||| || ||||| ||||  ||| ||||| ||||| || |||||||||||||||| ||| ||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca-ttgttgtgtctgacaccgaaacatataattacactgaattatgtgattt 13360410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 24645600 - 24645502
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| ||||||||| |||| |||||||| |  ||||| ||||||||||||||| ||||| ||||| | ||| || |||| ||| ||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgattt 24645502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 28152217 - 28152119
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| |||||| | |||| || | |||  | ||||| ||||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 28152119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 17841530 - 17841627
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| | |||| || ||||| || ||||| ||||| ||||||||||||||| | ||| | ||||||||||  ||| ||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattt 17841627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 19040421 - 19040373
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattt 19040373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 8101205 - 8101106
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||| ||  |||| ||||||||  |||||||||||| |||| |||| |||| || |  ||||||||||||||||||||||||| ||| | ||||||    
T  8101205 tctatgaaccatagacattctttggactagacgtgtttccatgtcggacatgtgttgtatttgacactgacacatataattacactggattatatgattt 8101106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 12696446 - 12696383
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    ||||||||| ||||||| |||||||||  ||||  | |||||||||||||||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 30851676 - 30851637
Alignment:
Q  215 cagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  30851676 cagacacgtgtcgtgtccgacaccgacacatataattaca 30851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 7378101 - 7378000
Alignment:
Q  169 attctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgat 268  Q
    |||||||||||||||||||||  |  ||| || |||||  | ||||| ||  | ||||||||||||||| |||||||||||||||| || ||| ||||||    
T  7378101 attctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgat 7378002  T
Q  269 tt 270  Q
    ||    
T  7378001 tt 7378000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 6898221 - 6898305
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    |||||||||||| |||||| | |||| || |||||||| ||||  ||||||  ||||||||||||| ||||| | ||||||||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacact 6898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 7265535 - 7265631
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||| ||| | |||| || | | || | ||||| |||| || | ||||||||||| ||||||||||||||||||| ||| ||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattt 7265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 8365588 - 8365628
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  8365588 gtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 8776908 - 8777011
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtg-----tcgtgtccgacactgacacatataattacactgcattttgtg 266  Q
    ||||||||||||||||||| | |||| ||  |||| || ||||| ||||||||     |||||||||||||  |||| | ||||||||||| ||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtg 8777007  T
Q  267 attt 270  Q
    ||||    
T  8777008 attt 8777011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 328
Target Start/End: Complemental strand, 10649312 - 10649277
Alignment:
Q  293 gtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10649312 gtgtcgtatccggtgtccgtatccgtgcttcataga 10649277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 16766827 - 16766756
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||||||||| |||| |||| || |||||  | ||||| ||||||||| ||||||||||| |||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 327
Target Start/End: Original strand, 853934 - 853968
Alignment:
Q  293 gtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||||||||||||||||||||||||| |||||||    
T  853934 gtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 7977770 - 7977868
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||| |||||| || ||| || ||||||||  |||| ||||  ||| ||||||||||| ||||| | ||||||||||| ||| ||| ||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattt 7977868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 7996325 - 7996416
Alignment:
Q  175 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| |||| |||||| || |||||  |||||| ||||||||||||    |||||| ||| ||||||||||||||| ||| | ||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattt 7996416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 8022476 - 8022385
Alignment:
Q  175 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| |||| |||||| || |||||  |||||| ||||||||||||    |||||| ||| ||||||||||||||| ||| | ||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattt 8022385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 32511606 - 32511704
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||| |  ||| || |||| | |  |||||||||  |||||| ||||||||  |||| ||||||||||||| ||| ||||||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattt 32511704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 9629513 - 9629448
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    |||||||||| |||||||| | |||| |||||||| || ||||| ||||| ||| |||||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 26402749 - 26402794
Alignment:
Q  285 ctgtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatagagt 330  Q
    ||||||| ||||| |||||||||||||| ||| |||||||||||||    
T  26402749 ctgtgtcagtgtcatgtccggtgtccgtgtccatgcttcatagagt 26402794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 31385048 - 31384983
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacact 238  Q
    |||||||||||||||||| |||||| || |||||  | ||||  |||||||||||||||| |||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacact 31384983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 4878061 - 4877982
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataatta 252  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| |||| |||||||||||||||| ||||| | ||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtc-ctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 4877982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 6389733 - 6389693
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||||||||||||||| || ||||||||||||||    
T  6389733 gtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 24138545 - 24138485
Alignment:
Q  177 aagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    |||||||||||||||| |||| || | ||| || |||||||||||||||| ||||| ||||    
T  24138545 aagcacggacactcttcggattaggcatgtctctgtgtcagacacgtgtcatgtccaacac 24138485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 28715368 - 28715316
Alignment:
Q  218 acacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||||| ||||| | ||||||||||| ||| ||| ||||    
T  28715368 acacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattt 28715316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 29020985 - 29020933
Alignment:
Q  218 acacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||| || |||||    
T  29020985 acacgtgtcgtgtccgacacaaacacctataattacactgaattatgcgattt 29020933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 30098982 - 30099061
Alignment:
Q  176 gaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacac 255  Q
    |||||||| |||||| ||||||||| |||||  |||||||||||||||||||| |||||||| |||||||||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacac 30099061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 6401627 - 6401557
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||||||||||| ||||||||| ||| |  |||||||||||||||||||||||||||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 21576685 - 21576783
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||| | |||| || |||||  | ||||||||||||||||||||||||||  ||||| | ||||||||||| ||| ||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattt 21576783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 42029871 - 42029773
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||| |||||||||||| | ||||||| ||||| | |||| |||||| |||||||||||||||| || ||||||||||||| || ||| ||||||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgattt 42029773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 21814391 - 21814320
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||||| ||| || ||||||||| |||||  ||||| ||||||||||||||||||||||| |||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 28588614 - 28588712
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||| |||||||||| |||| |  |||||    |||||||| | |||||||||||||||| ||||| ||||||||||||| ||| ||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattt 28588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 22013404 - 22013363
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  22013404 gtgtccgtgtcgtgtccggtgtccgtatccgtgcttcataga 22013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 2436918 - 2436878
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  2436918 gtgtcagtgtcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 16304366 - 16304438
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacaca 244  Q
    |||||||||||||||| || | |||| |||||||| || ||||| | |||||||||||||||| |||||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacaca 16304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 19452998 - 19453066
Alignment:
Q  175 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||||| ||| ||||||||| ||| | ||||||| ||||| ||||||||||||||| ||||||    
T  19452998 tgaagcacggacgctccttggataaggcgtatctccgtgtgagacatgtgtcgtgtccgacattgacac 19453066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 19820463 - 19820503
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  19820463 gtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 21190998 - 21191094
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||| | |||| || |||||  | | ||| ||||||||| ||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattt 21191094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 30502330 - 30502426
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||| ||| || |||||| || | |||  | ||||| |||| |||||||||||||||| ||||||||||||||||||| |||  |||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattt 30502426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 30542673 - 30542769
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||| ||| || |||||| || | |||  | ||||| |||| |||||||||||||||| ||||||||||||||||||| |||  |||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattt 30542769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 21522880 - 21522809
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||| ||||||||||||||||||| || |||||  | ||| | ||||||||||||||||||||| |||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 21533446 - 21533375
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||| ||||||||||||||||||| || |||||  | ||| | ||||||||||||||||||||| |||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 26312849 - 26312803
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||    
T  26312849 gtgtcagacacgtatcgtgtccgacaccgatacatataattacactg 26312803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 32630715 - 32630757
Alignment:
Q  212 tgtcagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  32630715 tgtcggacacgtgtcgtatccgacactgacacatataattaca 32630757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 43565000 - 43564902
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||  | |||| || |||||  | | ||| ||||| ||||||||||||||| ||||| ||||||||||||  ||| ||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 43564902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 18421826 - 18421879
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||| |||||||||||||| | ||||||||||||||||||| ||| ||||||||    
T  18421826 gacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattt 18421879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 40000493 - 40000561
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactga 240  Q
    ||||||||||||||||||| |  |||||||||||| || ||||||| ||| ||||| || |||||||||    
T  40000493 ctatgaagcacggacactcctcagataagacgtgtctcggtgtcaggcacatgtcgcgtacgacactga 40000561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 270
Target Start/End: Complemental strand, 21814313 - 21814282
Alignment:
Q  239 gacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||||||||||||||||    
T  21814313 gacacatataattacactgcattttgtgattt 21814282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 23012387 - 23012430
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||    
T  23012387 gtgtcagacatgtgtcgtgtccaacaccgacacatataattaca 23012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 39698671 - 39698600
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||| | |||| || ||||| || ||||| || || ||||||||||||||| |||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 15884057 - 15884009
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 15884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 37328913 - 37328953
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||||||| |||||||||| ||||||||||||||    
T  37328913 gtgtccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 37328953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 39268541 - 39268613
Alignment:
Q  175 tgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatat 247  Q
    |||||||||||||||| | |||| || |||||  | ||||| ||||| |||||||||| |||| |||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacacatat 39268613  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 39758324 - 39758259
Alignment:
Q  239 gacacatataattacactgcattttgtgatttcctnnnnnnnttagctgtgtcggtgtcgtgtccg 304  Q
    ||||||||||||||||||| ||| |||||||| ||       ||||||||||| ||||||||||||    
T  39758324 gacacatataattacactgaattatgtgattttctaaaaaatttagctgtgtccgtgtcgtgtccg 39758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 326
Target Start/End: Complemental strand, 14649 - 14498
Alignment:
Q  169 attctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgat 268  Q
    ||||||||||||||| |||||| || ||| || ||||| || ||||| |||||||||||||||||||||   ||| | ||||||||||| ||| ||||||    
T  14649 attctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgat 14553  T
Q  269 ttcctnnnnnnnttagctgtgtcggtgtcgtgtccggtgtccgtatccgtgcttcata 326  Q
    ||  |       |||| ||||||||   ||||||||||||||||||||||||||||||    
T  14552 tttttcaaattattagttgtgtcgg---cgtgtccggtgtccgtatccgtgcttcata 14498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 5414101 - 5414210
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac-----------atataattacactgcat 260  Q
    ||||||||||||||||||| |||||||||  ||||  | |||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcat 5414200  T
Q  261 tttgtgattt 270  Q
    ||||||||||    
T  5414201 tttgtgattt 5414210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 35161155 - 35161057
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| || |||| ||  ||||| | ||||| ||||||||||||||||||| |||| || ||||||||||||| ||| ||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgattt 35161057  T

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Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 19097835 - 19097932
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| |||||||||||| |||| |||||  |||||||||||||||||| ||| |||||| |||| ||||||||| |||| |||  |||||||    
T  19097835 ctatgaagcacagacactctttgg-taaggcgtgtccccgtgtcagacacgtgtcatgttcgacaccgacaaatataattatactgaattacgtgattt 19097932  T

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Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 23292926 - 23293024
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||| | |||| || |||||  | ||||| ||||||||||||||||||||| ||||| | |||||| |||| ||| ||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattt 23293024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 49431146 - 49431047
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||| ||||| |||||||| | ||||||| |||||  | ||||  ||||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  49431146 tctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgattt 49431047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 30982808 - 30982878
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||||||||||| || |||||  | ||||| ||||||||||||||| ||||| |||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 2361914 - 2361999
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    |||||||||||||||||||| |  ||| ||  |||| || |||||||||||| |||||||||||||| ||||| | ||||||||||    
T  2361914 tctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacact 2361999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 54580008 - 54580061
Alignment:
Q  217 gacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||| ||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattt 54580061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 34306743 - 34306842
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||| ||| || |  ||| || ||||| || ||||| ||||||||||||||||||||| ||||| | |||||||||| |||| | ||||||    
T  34306743 tctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgattt 34306842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 12324038 - 12323968
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||||||||||| | |||||||  ||||| ||||| || ||||||||| |||||||||| |||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacac 12323968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 24613630 - 24613700
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgaca 242  Q
    ||||||||||||||||||| | |||| ||||||||    ||||||||||||||||||||| ||||| ||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 28964188 - 28964286
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||| |||||||| | |||| || |||||  | ||||| || | |||||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattt 28964286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 36635450 - 36635345
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacact------gacacatataattacactgcattttg 264  Q
    |||||||||||||||||||||| |||| || |||||  | ||||| ||| ||||||||||| ||||||       |||||||||||||||||| ||| ||    
T  36635450 tctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatg 36635351  T
Q  265 tgattt 270  Q
    ||||||    
T  36635350 tgattt 36635345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 482299 - 482336
Alignment:
Q  286 tgtgtcggtgtcgtgtccggtgtccgtatccgtgcttc 323  Q
    |||||| |||||||||||||||||||||||||||||||    
T  482299 tgtgtcagtgtcgtgtccggtgtccgtatccgtgcttc 482336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 10499260 - 10499308
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||| ||||||||||||||||||||||||||||  ||| ||||||||    
T  10499260 gtgtcgggtccgacactgacacatataattacactaaattatgtgattt 10499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 36509074 - 36509130
Alignment:
Q  214 tcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||| ||||||| | ||||||||||||||||||  ||| ||||||||    
T  36509074 tcagacacgtgtcgcgtccgacgccgacacatataattacacttgattatgtgattt 36509130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 40179626 - 40179674
Alignment:
Q  222 gtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  40179626 gtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattt 40179674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 8402721 - 8402780
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||| |||| |||||||||| |||||||| |||||||||||||||| ||| | ||||||    
T  8402721 gtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattt 8402780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 12797317 - 12797376
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||| || ||||||||||||| ||||| | ||||||||||| ||| ||||||||    
T  12797317 gtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 12797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 325
Target Start/End: Original strand, 15835701 - 15835740
Alignment:
Q  286 tgtgtcggtgtcgtgtccggtgtccgtatccgtgcttcat 325  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  15835701 tgtgtctgtgtcgtgtccggtgtccatatccgtgcttcat 15835740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 46083920 - 46083991
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    |||||||||| |||||||| |   ||||| |||||  ||| |||||||||||||||||||||| ||||||||    
T  46083920 ctatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacac 46083991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 4672025 - 4672123
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||| ||||||| |||||| |||| |||| | |||||  |||||| | || |||||||| ||||||||||  ||||||| ||| ||| ||||    
T  4672025 ctatgaagcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatatagctacactgaattatgtaattt 4672123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 327
Target Start/End: Original strand, 7251696 - 7251730
Alignment:
Q  293 gtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    |||| ||||||||||||||||||||||||||||||    
T  7251696 gtgttgtgtccggtgtccgtatccgtgcttcatag 7251730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 16073513 - 16073415
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||| |||||||| | |||| || ||||| |  ||||| |||| || ||||||||||||| ||||| | ||||||||||| ||| || |||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgattt 16073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 20950368 - 20950458
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcatttt 263  Q
    ||||||| |||| ||||| |||||| |  |||||||| ||||   ||| || ||||||| ||||| ||||||||||||||||||| |||||    
T  20950368 tatgaagtacgggcactccttggattatgcgtgtttctgtgttgaacatgtatcgtgtctgacaccgacacatataattacactgaatttt 20950458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 35157925 - 35158023
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||||||||||||||||  | |||| |  |||||| | ||||  |||| |||||||||| ||||| ||||| ||||||||||||  ||| ||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgattt 35158023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 38846991 - 38847037
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    ||||| |||||||||||| |||||||||||||| | |||||||||||    
T  38846991 gtgtcggacacgtgtcgtatccgacactgacacttgtaattacactg 38847037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 328
Target Start/End: Complemental strand, 23700449 - 23700420
Alignment:
Q  299 tgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||||||||||||||||||||||||||||    
T  23700449 tgtccggtgtccgtatccgtgcttcataga 23700420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 23861369 - 23861445
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatata 248  Q
    |||||||||||| |||||||||| || || ||||| |  ||| |||||| ||||||| || ||||| ||||||||||    
T  23861369 ctatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatata 23861445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 5926 - 6034
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtg-----------tccgacactgacacatataattacactgcatt 261  Q
    ||||| |||||||||||| ||||||||| ||||| || |||||||||||||||||||           | |||||| |||||||||||||||||||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcatt 6025  T
Q  262 ttgtgattt 270  Q
    |||||||||    
T  6026 ttgtgattt 6034  T

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Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 45469 - 45555
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactg 257  Q
    ||||||||||||| ||| ||||||||| || | |||  | ||||||||||||||||||||||||||| ||||| | |||||||||||    
T  45469 tctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactg 45555  T

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Target: scaffold0652 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 403 - 500
Alignment:
Q  173 tatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||||||||| | |||| ||  ||||  | ||||| |||||| |||||||||||||| ||||| | ||||||||||| ||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattt 500  T

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Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 8918 - 8833
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    ||||||||||||||| |||| |  ||| || ||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||||    
T  8918 tctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 8833  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 70358 - 70299
Alignment:
Q  211 gtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||| ||| ||| ||||    
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattt 70299  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 90962 - 90864
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||||||||  |||||| |||||| || |||||||  ||||| ||||||||| ||||| ||||  |||| |||||||||||||| ||| | ||||||    
T  90962 ctatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattt 90864  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 71719 - 71678
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  71719 gtgtcagtgtcgtgtccgatgtccgtatccgtgcttcataga 71678  T

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Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 3427 - 3343
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattacact 256  Q
    ||||||||||||||||||| | |||| || |||||  | |||||   |||||||| |||||||||||||||| | ||||||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacact 3343  T

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Target: scaffold0223 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 20161 - 20122
Alignment:
Q  288 tgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  20161 tgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

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Target: scaffold0512 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 4976 - 5058
Alignment:
Q  172 ctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacacatataattaca 254  Q
    ||||||||||| ||||||| | |||| || | ||| ||  |||| ||||||||||||||||||||| ||||| | ||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 9957 - 9919
Alignment:
Q  232 cgacactgacacatataattacactgcattttgtgattt 270  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  9957 cgacaccgacacatataattacactgcattttatgattt 9919  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 241725 - 241659
Alignment:
Q  171 tctatgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacac 237  Q
    |||||||||||||||||||  | |||| || |||||  | ||||| |||||||||||||||||||||    
T  241725 tctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 241659  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||| |||||| ||  ||||    ||||||||| ||||||||||||||||| |||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

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Target: scaffold0306; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 13390 - 13350
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||| | |||||||||||||||||||||||||||    
T  13390 gtgtccgtgtcatctccggtgtccgtatccgtgcttcatag 13350  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 23410 - 23370
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcataga 328  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  23410 gtgtctgtgtcgtgtccg-tgtccgtatccgtgcttcataga 23370  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  174 atgaagcacggacactctttggataagacgtgtttccgtgtcagacacgtgtcgtgtccgacactgacac 243  Q
    ||||||||||||||||| |||||| ||  ||||    ||||||||| ||||||||||||||||| |||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

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Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 21937 - 21977
Alignment:
Q  287 gtgtcggtgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||| ||||| | |||||||||||||||||||||||||||    
T  21937 gtgtccgtgtcatctccggtgtccgtatccgtgcttcatag 21977  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 33431 - 33464
Alignment:
Q  294 tgtcgtgtccggtgtccgtatccgtgcttcatag 327  Q
    ||||||||||||||||| ||||||||||||||||    
T  33431 tgtcgtgtccggtgtccttatccgtgcttcatag 33464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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