View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5015_low_33 (Length: 252)
Name: NF5015_low_33
Description: NF5015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5015_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 9123568 - 9123330
Alignment:
| Q |
10 |
aagaatatgctgaaaagtatacaaaaa-caacttgacttgtaaggaaagtctacaaatcaacaaaattaaaaaccaaagaaggtcgttgctgtacaattt |
108 |
Q |
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| T |
9123568 |
aagaaaatgctgaaaagtatacaaaaaacaacttgacttgtaaggaaagtctacaaatcaacaaaattaaaaaccaaagaaggtcgttgctgtacaattt |
9123469 |
T |
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| Q |
109 |
caattgccttgctctactcctaatacaattgtagacactctaagaatagatgaaaccttaatctattcagaaatattttaaatacnnnnnnnnnntctaa |
208 |
Q |
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| T |
9123468 |
caattgccttgctctactcctaatacaattgtagacactctaagaatagatgaaaccttcatctattcaaaaatattttaaata-taaaaaaaattctaa |
9123370 |
T |
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| Q |
209 |
tttatagggcatacatgtgcat-aaaaaataatttaaaag |
247 |
Q |
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| T |
9123369 |
tttatagggcatacatgtgcataaaaaaataatttaaaag |
9123330 |
T |
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