View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5015_low_40 (Length: 241)

Name: NF5015_low_40
Description: NF5015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5015_low_40
NF5015_low_40
[»] chr4 (77 HSPs)
chr4 (1-231)||(31273382-31273612)
chr4 (1-231)||(37259881-37260111)
chr4 (64-231)||(5271423-5271588)
chr4 (1-231)||(19106482-19106710)
chr4 (68-231)||(31268962-31269125)
chr4 (64-231)||(37264568-37264735)
chr4 (15-231)||(51697789-51698008)
chr4 (63-231)||(13521996-13522165)
chr4 (65-231)||(12823899-12824065)
chr4 (51-231)||(32082095-32082274)
chr4 (66-231)||(5928223-5928388)
chr4 (66-223)||(8693637-8693794)
chr4 (66-231)||(16420956-16421120)
chr4 (63-231)||(55251644-55251810)
chr4 (15-169)||(32221163-32221317)
chr4 (88-231)||(13059358-13059501)
chr4 (88-231)||(31765830-31765977)
chr4 (71-225)||(33468983-33469137)
chr4 (66-231)||(8030480-8030645)
chr4 (66-231)||(19101903-19102068)
chr4 (78-231)||(47244186-47244339)
chr4 (122-231)||(42758759-42758868)
chr4 (100-231)||(33463360-33463491)
chr4 (51-231)||(12878138-12878330)
chr4 (83-231)||(47574567-47574716)
chr4 (115-225)||(13065778-13065888)
chr4 (72-210)||(51696931-51697072)
chr4 (99-231)||(19906210-19906342)
chr4 (63-231)||(31729391-31729543)
chr4 (114-231)||(2819818-2819935)
chr4 (66-231)||(48276653-48276807)
chr4 (130-231)||(10120813-10120913)
chr4 (115-231)||(12874514-12874630)
chr4 (139-231)||(653043-653134)
chr4 (122-221)||(1151312-1151411)
chr4 (67-125)||(55810257-55810315)
chr4 (115-231)||(4550973-4551088)
chr4 (114-216)||(32545068-32545171)
chr4 (127-222)||(19541174-19541269)
chr4 (151-216)||(20513118-20513182)
chr4 (116-180)||(6070563-6070627)
chr4 (139-231)||(8980289-8980380)
chr4 (139-231)||(8985409-8985500)
chr4 (139-231)||(13700510-13700601)
chr4 (139-231)||(21299837-21299928)
chr4 (139-231)||(36354176-36354267)
chr4 (139-231)||(36359294-36359385)
chr4 (139-231)||(39999069-39999160)
chr4 (139-231)||(40004027-40004118)
chr4 (139-231)||(41393245-41393336)
chr4 (139-231)||(51019377-51019468)
chr4 (139-231)||(53797629-53797720)
chr4 (139-219)||(54343203-54343282)
chr4 (139-231)||(54348357-54348448)
chr4 (139-231)||(54991486-54991577)
chr4 (52-114)||(8652129-8652192)
chr4 (52-114)||(8663936-8663999)
chr4 (136-231)||(24490028-24490123)
chr4 (151-216)||(16595953-16596017)
chr4 (162-231)||(16953107-16953176)
chr4 (132-201)||(52691089-52691158)
chr4 (141-225)||(8083037-8083121)
chr4 (139-231)||(13695159-13695250)
chr4 (139-231)||(21304957-21305048)
chr4 (139-231)||(47046311-47046402)
chr4 (151-216)||(15020485-15020549)
chr4 (139-231)||(13710669-13710759)
chr4 (136-175)||(10318839-10318878)
chr4 (72-115)||(23093112-23093155)
chr4 (130-216)||(33722939-33723025)
chr4 (136-174)||(39319628-39319666)
chr4 (138-184)||(40408196-40408242)
chr4 (129-231)||(16947994-16948092)
chr4 (136-169)||(34560494-34560527)
chr4 (136-168)||(3998123-3998155)
chr4 (16-75)||(33463494-33463553)
chr4 (15-75)||(39319513-39319572)
[»] chr8 (58 HSPs)
chr8 (15-231)||(17025811-17026026)
chr8 (15-231)||(17556303-17556518)
chr8 (1-222)||(34118327-34118548)
chr8 (1-213)||(4238337-4238550)
chr8 (65-231)||(31449870-31450036)
chr8 (66-225)||(33416473-33416632)
chr8 (64-231)||(18876371-18876537)
chr8 (28-231)||(38182241-38182442)
chr8 (66-231)||(44925927-44926092)
chr8 (62-195)||(40130726-40130859)
chr8 (65-223)||(1807397-1807555)
chr8 (71-213)||(4243076-4243218)
chr8 (65-231)||(1910973-1911139)
chr8 (68-219)||(28559670-28559821)
chr8 (15-225)||(40125895-40126083)
chr8 (114-231)||(19166608-19166725)
chr8 (112-231)||(36683551-36683670)
chr8 (116-225)||(17953883-17953992)
chr8 (115-225)||(24090602-24090712)
chr8 (116-231)||(15875672-15875787)
chr8 (52-223)||(2965531-2965713)
chr8 (115-223)||(23548644-23548752)
chr8 (66-148)||(19915073-19915155)
chr8 (66-231)||(43302722-43302880)
chr8 (108-223)||(2355471-2355586)
chr8 (138-231)||(33616731-33616823)
chr8 (136-219)||(19430011-19430093)
chr8 (136-219)||(19435513-19435595)
chr8 (136-219)||(19566160-19566242)
chr8 (136-219)||(19571662-19571744)
chr8 (136-231)||(31030525-31030619)
chr8 (129-219)||(28564837-28564927)
chr8 (129-219)||(28572460-28572550)
chr8 (139-231)||(32015700-32015791)
chr8 (130-189)||(13584341-13584400)
chr8 (130-216)||(19954262-19954348)
chr8 (130-215)||(4544271-4544356)
chr8 (114-223)||(29220240-29220347)
chr8 (130-214)||(19949808-19949892)
chr8 (122-215)||(24673345-24673438)
chr8 (151-212)||(2469986-2470046)
chr8 (138-219)||(7902561-7902642)
chr8 (139-231)||(17955793-17955884)
chr8 (143-231)||(21644085-21644172)
chr8 (139-231)||(24884712-24884803)
chr8 (139-231)||(42514378-42514469)
chr8 (138-172)||(15951584-15951618)
chr8 (124-216)||(5883983-5884074)
chr8 (116-155)||(12820324-12820363)
chr8 (137-216)||(17793450-17793529)
chr8 (168-231)||(27415539-27415602)
chr8 (77-136)||(28565268-28565327)
chr8 (77-136)||(28572891-28572950)
chr8 (139-182)||(32010538-32010581)
chr8 (131-169)||(34818764-34818802)
chr8 (131-169)||(37771703-37771741)
chr8 (115-180)||(13149709-13149773)
chr8 (130-231)||(43999234-43999334)
[»] chr3 (70 HSPs)
chr3 (18-231)||(7571222-7571435)
chr3 (1-231)||(3692477-3692707)
chr3 (15-231)||(8887803-8888019)
chr3 (15-231)||(18471881-18472096)
chr3 (64-231)||(23666127-23666294)
chr3 (64-231)||(24038375-24038542)
chr3 (65-231)||(3672509-3672675)
chr3 (66-231)||(39775732-39775897)
chr3 (15-231)||(12965877-12966092)
chr3 (65-231)||(8883093-8883259)
chr3 (71-231)||(758372-758532)
chr3 (66-231)||(8069603-8069768)
chr3 (66-231)||(18467149-18467314)
chr3 (65-231)||(3418917-3419084)
chr3 (63-225)||(20519975-20520137)
chr3 (66-231)||(14438699-14438864)
chr3 (66-231)||(29350164-29350329)
chr3 (71-223)||(3033573-3033725)
chr3 (1-231)||(23661468-23661685)
chr3 (68-231)||(49971428-49971591)
chr3 (88-231)||(32474684-32474825)
chr3 (15-231)||(12112645-12112873)
chr3 (68-223)||(29715570-29715725)
chr3 (66-188)||(27708803-27708924)
chr3 (69-231)||(55431242-55431404)
chr3 (66-225)||(3657250-3657409)
chr3 (116-223)||(12971645-12971752)
chr3 (64-182)||(2207760-2207878)
chr3 (115-226)||(28125090-28125200)
chr3 (130-231)||(26962050-26962150)
chr3 (136-231)||(13022024-13022118)
chr3 (136-219)||(33089359-33089441)
chr3 (130-216)||(48432398-48432484)
chr3 (15-120)||(6606772-6606877)
chr3 (131-187)||(25726841-25726897)
chr3 (136-231)||(20810369-20810463)
chr3 (136-231)||(38436995-38437089)
chr3 (136-219)||(53119524-53119606)
chr3 (57-115)||(16013635-16013693)
chr3 (139-231)||(3476950-3477041)
chr3 (130-182)||(15768243-15768295)
chr3 (139-231)||(17368719-17368810)
chr3 (139-231)||(20090666-20090757)
chr3 (139-231)||(20095791-20095882)
chr3 (139-231)||(34129173-34129264)
chr3 (136-231)||(2617260-2617355)
chr3 (139-182)||(15763082-15763125)
chr3 (165-231)||(27708959-27709025)
chr3 (130-223)||(27605147-27605240)
chr3 (115-231)||(19276924-19277040)
chr3 (139-231)||(54270644-54270735)
chr3 (139-231)||(55128790-55128881)
chr3 (139-182)||(17364063-17364106)
chr3 (130-216)||(48435847-48435933)
chr3 (141-182)||(10321444-10321485)
chr3 (116-215)||(20507630-20507726)
chr3 (157-231)||(16013724-16013799)
chr3 (139-182)||(17357836-17357879)
chr3 (139-182)||(30341896-30341939)
chr3 (141-195)||(1688926-1688980)
chr3 (138-168)||(21494369-21494399)
chr3 (136-174)||(53358239-53358277)
chr3 (158-215)||(1641092-1641149)
chr3 (139-180)||(3482477-3482518)
chr3 (130-231)||(4117604-4117704)
chr3 (136-169)||(10586248-10586281)
chr3 (151-216)||(16983006-16983070)
chr3 (127-212)||(17026128-17026213)
chr3 (130-182)||(6024110-6024162)
chr3 (130-170)||(7806616-7806656)
[»] chr5 (57 HSPs)
chr5 (1-231)||(561328-561558)
chr5 (1-231)||(42001295-42001525)
chr5 (1-231)||(39522909-39523140)
chr5 (65-231)||(41996590-41996756)
chr5 (66-231)||(26667198-26667363)
chr5 (66-231)||(26938795-26938960)
chr5 (66-231)||(29167977-29168142)
chr5 (65-231)||(556620-556786)
chr5 (62-231)||(39518332-39518501)
chr5 (66-231)||(12102950-12103116)
chr5 (68-231)||(36423565-36423728)
chr5 (66-231)||(12045143-12045309)
chr5 (66-231)||(37248799-37248964)
chr5 (65-231)||(12501903-12502070)
chr5 (66-231)||(7451684-7451849)
chr5 (71-231)||(36428640-36428800)
chr5 (87-231)||(36942269-36942413)
chr5 (66-231)||(37652834-37652999)
chr5 (66-231)||(10759824-10759992)
chr5 (88-231)||(36937515-36937658)
chr5 (65-231)||(6155423-6155589)
chr5 (65-231)||(6514605-6514770)
chr5 (78-231)||(40147833-40147986)
chr5 (66-231)||(41587164-41587329)
chr5 (15-231)||(11981284-11981501)
chr5 (66-223)||(3665857-3666015)
chr5 (65-231)||(35679879-35680048)
chr5 (89-225)||(20181073-20181209)
chr5 (70-231)||(32461553-32461702)
chr5 (65-231)||(12041936-12042102)
chr5 (116-215)||(12102851-12102950)
chr5 (123-232)||(15414884-15414993)
chr5 (122-224)||(16116260-16116362)
chr5 (66-148)||(37550089-37550170)
chr5 (139-231)||(24435873-24435964)
chr5 (136-231)||(7805068-7805162)
chr5 (136-231)||(14374132-14374226)
chr5 (139-231)||(13582694-13582785)
chr5 (1-75)||(36937649-36937723)
chr5 (139-231)||(36253826-36253917)
chr5 (139-231)||(17510058-17510149)
chr5 (115-220)||(9911128-9911233)
chr5 (139-231)||(24771361-24771452)
chr5 (139-231)||(42019573-42019664)
chr5 (130-225)||(1414061-1414155)
chr5 (139-182)||(26709102-26709145)
chr5 (139-182)||(26978836-26978879)
chr5 (151-216)||(18265524-18265588)
chr5 (22-86)||(15415020-15415084)
chr5 (139-231)||(17504953-17505044)
chr5 (15-75)||(23977484-23977543)
chr5 (130-182)||(24776867-24776919)
chr5 (136-231)||(28857858-28857954)
chr5 (139-175)||(41853548-41853584)
chr5 (139-231)||(41858593-41858684)
chr5 (135-169)||(13301551-13301585)
chr5 (136-169)||(31731540-31731573)
[»] chr2 (49 HSPs)
chr2 (1-231)||(9180728-9180958)
chr2 (15-225)||(30650804-30651014)
chr2 (17-231)||(10160728-10160942)
chr2 (18-231)||(30658141-30658354)
chr2 (33-231)||(25478301-25478503)
chr2 (66-231)||(1934997-1935162)
chr2 (66-231)||(9189807-9189972)
chr2 (66-231)||(19892470-19892635)
chr2 (66-231)||(31326665-31326830)
chr2 (66-231)||(18344357-18344522)
chr2 (66-231)||(35601848-35602013)
chr2 (72-217)||(28603230-28603375)
chr2 (66-231)||(7737855-7738020)
chr2 (66-231)||(35639001-35639166)
chr2 (65-232)||(42926762-42926930)
chr2 (66-231)||(12796851-12797016)
chr2 (66-231)||(29677308-29677472)
chr2 (66-231)||(30631505-30631670)
chr2 (66-231)||(25497329-25497498)
chr2 (66-231)||(29677694-29677858)
chr2 (66-153)||(15489796-15489883)
chr2 (115-226)||(19578423-19578534)
chr2 (115-220)||(21523735-21523839)
chr2 (116-231)||(19094499-19094614)
chr2 (118-224)||(40847606-40847712)
chr2 (115-211)||(20711420-20711516)
chr2 (136-231)||(42914639-42914733)
chr2 (138-231)||(5089277-5089369)
chr2 (130-224)||(160031-160125)
chr2 (115-223)||(17545310-17545419)
chr2 (139-231)||(42723455-42723546)
chr2 (139-231)||(42728624-42728715)
chr2 (139-231)||(44096302-44096393)
chr2 (139-231)||(44754600-44754691)
chr2 (139-231)||(44759766-44759857)
chr2 (130-216)||(14104580-14104666)
chr2 (65-110)||(40847735-40847780)
chr2 (139-231)||(40518476-40518567)
chr2 (130-216)||(44957456-44957542)
chr2 (55-115)||(30628762-30628822)
chr2 (138-174)||(39542900-39542936)
chr2 (139-182)||(28751781-28751824)
chr2 (136-174)||(19538382-19538420)
chr2 (136-169)||(6297951-6297984)
chr2 (114-223)||(7734574-7734682)
chr2 (130-174)||(39542566-39542610)
chr2 (49-81)||(39542652-39542684)
chr2 (49-81)||(39542825-39542857)
chr2 (139-231)||(40392319-40392410)
[»] chr1 (56 HSPs)
chr1 (1-224)||(16649624-16649846)
chr1 (19-225)||(51041473-51041677)
chr1 (7-195)||(25855038-25855226)
chr1 (56-225)||(47451235-47451404)
chr1 (59-223)||(40165899-40166063)
chr1 (65-231)||(23192821-23192987)
chr1 (61-231)||(33301184-33301354)
chr1 (61-213)||(3094034-3094187)
chr1 (66-231)||(47455390-47455555)
chr1 (66-231)||(19799017-19799182)
chr1 (15-223)||(10139964-10140172)
chr1 (64-223)||(26927734-26927893)
chr1 (66-223)||(10135382-10135539)
chr1 (66-231)||(39588371-39588536)
chr1 (68-231)||(18784553-18784716)
chr1 (64-231)||(16035526-16035699)
chr1 (78-225)||(38620631-38620777)
chr1 (64-183)||(16832025-16832144)
chr1 (115-219)||(12259971-12260075)
chr1 (66-149)||(25843738-25843821)
chr1 (115-231)||(11806334-11806450)
chr1 (115-231)||(8900229-8900345)
chr1 (136-231)||(10106100-10106194)
chr1 (136-231)||(38734272-38734366)
chr1 (130-231)||(2493822-2493923)
chr1 (151-221)||(12906166-12906235)
chr1 (136-231)||(13890810-13890904)
chr1 (136-231)||(39747169-39747263)
chr1 (129-225)||(5346652-5346748)
chr1 (136-231)||(26651170-26651264)
chr1 (130-216)||(27761858-27761944)
chr1 (136-225)||(5602435-5602523)
chr1 (151-216)||(33380940-33381004)
chr1 (139-231)||(5724979-5725070)
chr1 (139-231)||(11251117-11251208)
chr1 (139-231)||(36684719-36684810)
chr1 (139-231)||(37404420-37404511)
chr1 (4-60)||(47452066-47452122)
chr1 (139-231)||(3584601-3584692)
chr1 (130-182)||(4632979-4633031)
chr1 (139-231)||(34318228-34318319)
chr1 (130-221)||(36724698-36724789)
chr1 (139-219)||(37409553-37409632)
chr1 (136-231)||(14582096-14582190)
chr1 (130-189)||(19422923-19422982)
chr1 (130-212)||(24159822-24159904)
chr1 (139-182)||(27716443-27716486)
chr1 (136-174)||(8267891-8267929)
chr1 (139-224)||(11387841-11387925)
chr1 (139-175)||(5730105-5730141)
chr1 (63-115)||(46696593-46696645)
chr1 (151-221)||(23193237-23193306)
chr1 (151-216)||(31063968-31064032)
chr1 (136-169)||(41098017-41098050)
chr1 (158-214)||(25661844-25661899)
chr1 (151-211)||(32987252-32987311)
[»] chr7 (54 HSPs)
chr7 (17-225)||(8268170-8268378)
chr7 (66-231)||(4930158-4930324)
chr7 (63-231)||(9650971-9651140)
chr7 (76-231)||(26341135-26341290)
chr7 (18-231)||(13314240-13314453)
chr7 (66-231)||(8075975-8076141)
chr7 (87-231)||(44510681-44510825)
chr7 (15-231)||(10388371-10388596)
chr7 (65-231)||(44423141-44423308)
chr7 (69-218)||(42627214-42627364)
chr7 (116-231)||(4579484-4579599)
chr7 (15-208)||(30256730-30256922)
chr7 (116-231)||(23246937-23247052)
chr7 (72-222)||(27238173-27238324)
chr7 (137-231)||(23866065-23866159)
chr7 (15-231)||(21671059-21671286)
chr7 (115-225)||(3357642-3357752)
chr7 (119-225)||(29150913-29151019)
chr7 (66-231)||(3879922-3880089)
chr7 (115-231)||(12254054-12254170)
chr7 (123-212)||(16372381-16372469)
chr7 (122-231)||(25543366-25543475)
chr7 (66-212)||(26287181-26287339)
chr7 (115-226)||(15642209-15642320)
chr7 (119-211)||(9008142-9008234)
chr7 (136-231)||(24528351-24528445)
chr7 (136-231)||(9973459-9973553)
chr7 (153-214)||(29478176-29478236)
chr7 (139-231)||(16539416-16539507)
chr7 (139-231)||(16626155-16626246)
chr7 (139-231)||(33238002-33238093)
chr7 (139-231)||(42571945-42572036)
chr7 (139-231)||(47998975-47999066)
chr7 (136-231)||(28292507-28292600)
chr7 (141-219)||(33226416-33226493)
chr7 (139-231)||(2234634-2234725)
chr7 (139-231)||(32212658-32212749)
chr7 (139-231)||(33243179-33243270)
chr7 (139-219)||(47177135-47177214)
chr7 (139-231)||(47993800-47993891)
chr7 (164-231)||(6590987-6591054)
chr7 (139-182)||(21081093-21081136)
chr7 (130-215)||(6898376-6898461)
chr7 (139-225)||(17495403-17495488)
chr7 (139-225)||(17557726-17557811)
chr7 (139-231)||(12934397-12934488)
chr7 (139-231)||(43892858-43892949)
chr7 (16-75)||(19640135-19640193)
chr7 (139-182)||(22857739-22857782)
chr7 (65-111)||(3045489-3045534)
chr7 (66-108)||(3284660-3284702)
chr7 (153-215)||(3284740-3284802)
chr7 (136-169)||(27256239-27256272)
chr7 (151-215)||(1289353-1289416)
[»] scaffold0352 (1 HSPs)
scaffold0352 (61-231)||(7025-7195)
[»] scaffold0182 (1 HSPs)
scaffold0182 (66-231)||(9891-10056)
[»] scaffold0002 (2 HSPs)
scaffold0002 (66-231)||(4000-4165)
scaffold0002 (65-219)||(443960-444102)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-231)||(82926-83157)
[»] chr6 (60 HSPs)
chr6 (63-231)||(6407864-6408032)
chr6 (65-231)||(8747707-8747873)
chr6 (78-231)||(11570753-11570906)
chr6 (66-212)||(19674239-19674385)
chr6 (68-231)||(12688899-12689062)
chr6 (22-221)||(25316580-25316784)
chr6 (22-221)||(26204074-26204278)
chr6 (92-231)||(2700110-2700249)
chr6 (64-231)||(21308958-21309122)
chr6 (66-231)||(33687607-33687772)
chr6 (66-177)||(11534736-11534847)
chr6 (66-177)||(11560246-11560357)
chr6 (72-188)||(11427975-11428091)
chr6 (52-231)||(29892265-29892455)
chr6 (115-231)||(20748288-20748404)
chr6 (115-231)||(11614096-11614212)
chr6 (119-222)||(12406366-12406469)
chr6 (116-231)||(24589168-24589283)
chr6 (87-225)||(14508931-14509069)
chr6 (119-231)||(13736682-13736794)
chr6 (135-231)||(12183004-12183100)
chr6 (69-131)||(17964634-17964696)
chr6 (136-225)||(19478145-19478233)
chr6 (160-231)||(16836160-16836231)
chr6 (136-231)||(3901909-3902004)
chr6 (136-231)||(13605096-13605190)
chr6 (160-231)||(17964563-17964634)
chr6 (151-216)||(35129640-35129704)
chr6 (139-231)||(34142080-34142171)
chr6 (139-231)||(34154696-34154787)
chr6 (139-226)||(21401755-21401841)
chr6 (135-225)||(5600982-5601072)
chr6 (136-224)||(10642706-10642794)
chr6 (139-231)||(22698247-22698338)
chr6 (139-231)||(31981560-31981651)
chr6 (126-225)||(22695281-22695380)
chr6 (122-180)||(2760297-2760355)
chr6 (123-169)||(2882821-2882867)
chr6 (116-169)||(2863518-2863571)
chr6 (159-216)||(32815082-32815138)
chr6 (116-188)||(9751857-9751928)
chr6 (139-231)||(21396699-21396790)
chr6 (122-231)||(22609556-22609659)
chr6 (139-231)||(24192484-24192575)
chr6 (139-231)||(29491241-29491332)
chr6 (139-182)||(24191435-24191478)
chr6 (136-174)||(11956762-11956800)
chr6 (63-115)||(15991829-15991881)
chr6 (15-75)||(15991901-15991961)
chr6 (63-115)||(15999491-15999543)
chr6 (15-75)||(15999563-15999623)
chr6 (55-115)||(22609470-22609530)
chr6 (139-182)||(34375919-34375962)
chr6 (136-182)||(17281616-17281662)
chr6 (136-221)||(5740804-5740889)
chr6 (139-172)||(6728397-6728430)
chr6 (137-214)||(12851809-12851886)
chr6 (71-112)||(13736814-13736855)
chr6 (114-147)||(19995439-19995472)
chr6 (151-195)||(14041703-14041747)
[»] scaffold0012 (1 HSPs)
scaffold0012 (66-231)||(166090-166256)
[»] scaffold0057 (1 HSPs)
scaffold0057 (64-231)||(35558-35725)
[»] scaffold0054 (1 HSPs)
scaffold0054 (64-231)||(25323-25490)
[»] scaffold0240 (1 HSPs)
scaffold0240 (11-231)||(3849-4082)
[»] scaffold0008 (1 HSPs)
scaffold0008 (115-231)||(255792-255908)
[»] scaffold0097 (1 HSPs)
scaffold0097 (115-211)||(15259-15355)
[»] scaffold2020 (1 HSPs)
scaffold2020 (66-231)||(283-462)
[»] scaffold0009 (1 HSPs)
scaffold0009 (66-231)||(165033-165212)
[»] scaffold0132 (2 HSPs)
scaffold0132 (136-231)||(2776-2870)
scaffold0132 (136-231)||(10736-10830)
[»] scaffold0011 (3 HSPs)
scaffold0011 (136-231)||(1562-1656)
scaffold0011 (136-231)||(7043-7137)
scaffold0011 (143-188)||(155542-155587)
[»] scaffold0018 (1 HSPs)
scaffold0018 (130-216)||(171734-171820)
[»] scaffold0067 (1 HSPs)
scaffold0067 (136-182)||(34021-34067)
[»] scaffold0184 (1 HSPs)
scaffold0184 (122-223)||(2291-2391)
[»] scaffold0060 (1 HSPs)
scaffold0060 (130-231)||(37001-37101)
[»] scaffold0594 (1 HSPs)
scaffold0594 (139-231)||(9212-9303)
[»] scaffold0166 (2 HSPs)
scaffold0166 (139-231)||(13744-13835)
scaffold0166 (130-182)||(19250-19302)
[»] scaffold0055 (1 HSPs)
scaffold0055 (139-231)||(3058-3149)
[»] scaffold0052 (1 HSPs)
scaffold0052 (139-231)||(81386-81477)
[»] scaffold0014 (2 HSPs)
scaffold0014 (139-231)||(31545-31636)
scaffold0014 (139-231)||(26373-26464)
[»] scaffold0517 (1 HSPs)
scaffold0517 (139-219)||(3563-3642)
[»] scaffold0020 (1 HSPs)
scaffold0020 (131-169)||(1291-1329)
[»] scaffold0128 (1 HSPs)
scaffold0128 (133-214)||(13265-13346)


Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 31273382 - 31273612
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| ||||||||||||| |||||||||||||||||||| || || || |||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  31273382 agggacaattgaagctcaacaagtaacttcttcggtagacgtagcagattgaaacgtcttaaaattgttgtttttgaatttccaaactgttgtatttgga 31273481  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  31273482 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaga 31273581  T
Q  201 cagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||| ||||    
T  31273582 cagactatcaaccacgccgcctccaggataa 31273612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 37260111 - 37259881
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  37260111 agggacaattgaagctcaacaagtaacttcttcagtagacataacataatgaaacgtcttaaaattgttgtttttgaatttccaaactgttgtatttgga 37260012  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||||| |||     
T  37260011 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaagg 37259912  T
Q  201 cagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||| ||||    
T  37259911 cagactatcaaccacgccgcctccaggataa 37259881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 5271588 - 5271423
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||||||||| |||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271588 attgttgtttttggatttccaaactgtt--atttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 5271491  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  5271490 taagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 5271423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 19106482 - 19106710
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| || |||| || ||||||||| ||||||||||  ||||||||| |||||||| ||||||||||||||||| ||||| |||| || ||||||||||    
T  19106482 agggacaactgaaccttaataagtaaattcttcggta--cataacataaagaaacgtattaaaattgttgtttttggattttcaaattgctgtatttgga 19106579  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||| | ||||||||||| |||||| |||     
T  19106580 tttccaaattctattatctaccgaagttgttactaggttgagtcacaagcagatcgctttctttaagacgtttcatagcactgcccaaaattgtgcaagg 19106679  T
Q  201 cagactatcaaccacgccgcctccagaataa 231  Q
    | |||||||||||||| ||||||||||||||    
T  19106680 ctgactatcaaccacgtcgcctccagaataa 19106710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 31268962 - 31269125
Alignment:
Q  68 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 167  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31268962 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 31269061  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| || |||||| ||| |||||||||||||||||||||||||| ||||    
T  31269062 acgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 31269125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 37264735 - 37264568
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37264735 attgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctt 37264636  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||| ||||    
T  37264635 taagacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataa 37264568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 51697789 - 51698008
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattc--- 111  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||| |||||||| ||||| |||| | ||||||||||||||||||||||       
T  51697789 ctcaataag-aacttcttcggtagacataacatatagaaatatcttaaaattattgtttttggattttcaaactattgtatttggatttccaaattcatt 51697887  T
Q  112 -tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatca 210  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || |||||| ||| |||||| ||| ||||||||||    
T  51697888 ctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcatgacactgctcaaaattgtgcaaggcagactatca 51697987  T
Q  211 accacgccgcctccagaataa 231  Q
    |||||||||||||||| ||||    
T  51697988 accacgccgcctccaggataa 51698008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 13522165 - 13521996
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 161  Q
    ||||||||||||| ||||| |||| |||||||||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  13522165 aattgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 13522066  T
Q  162 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  13522065 tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 13521996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 12824065 - 12823899
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12824065 ttgttgttttttgatttctaaactgttgtatttggatttccaaattctattttctaccgaagttgttattaggttgagtcatgaccaggtcgctctcttt 12823966  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||    
T  12823965 aagacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccaggataa 12823899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 51 - 231
Target Start/End: Complemental strand, 32082274 - 32082095
Alignment:
Q  51 gaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgacc 150  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32082274 gaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatcaaccgaagttgttactaggttgagtcacgacc 32082175  T
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    || || |||| |||||||| |||| |||||||| |||| |||||| ||| || ||||||||||||||||||||||| ||||    
T  32082174 agatcactctttttaagacatttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcctccaggataa 32082095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 5928388 - 5928223
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5928388 tgttgtttttagatttccaaactgttgtatttggagtttcaaattctattatctaccgaagttgttaccaggttgagtcacgaccaggtcgctctcttta 5928289  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||| |||| |||||||||| ||| |||||| ||| ||||||||||||||| |||||||||| ||||    
T  5928288 agatgtttagtggcactgctcaaaattgtgcaaggcagactatcaaccacaccgcctccaggataa 5928223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 8693637 - 8693794
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8693637 tgttgtttttggattttcaaactgttgtatttggatttccaaattctattgtctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 8693736  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    |||||||||||||| || ||||| |||||| |||||| ||||||||||||||||||||    
T  8693737 agacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacgccgcctc 8693794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 16420956 - 16421120
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16420956 tgttgtttttggatttccaaactgttgtatttagatttccaa-ttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcatta 16421054  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| |||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||| ||||    
T  16421055 agacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacaggataa 16421120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 55251644 - 55251810
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 162  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| |    
T  55251644 aattgttgtttttcgatttccaaactgttgtatttggatttccaa-ttctattatctattgaagttgttactaggttgagtcacgaccaggtcgctct-t 55251741  T
Q  163 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||| ||||    
T  55251742 ttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccaggataa 55251810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 32221317 - 32221163
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||||||| |||||||||||||||| || || ||| | ||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||||||    
T  32221317 ctcaataagtaatttcttcggtagacatagcagatcgaaccatcttaaaattgttgtttttggattttcaaattgttgtatttggattttcaaattctat 32221218  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 169  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32221217 tatctaccgaaattgttactaggttgagtcacgaccaggtcgctctctttaagac 32221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 13059358 - 13059501
Alignment:
Q  88 tgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 187  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||  |    
T  13059358 tgttgtatttggattttcaaattctattatctaccgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttcgtggcactgcata 13059457  T
Q  188 agattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    | |||||| ||||||||||||||||||| ||||||| |||||||    
T  13059458 aaattgtgcaagacagactatcaaccactccgcctctagaataa 13059501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 31765830 - 31765977
Alignment:
Q  88 tgttgtatttggatttccaaattctatta----tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactg 183  Q
    |||||| ||||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  31765830 tgttgtttttggatttccaaattctattaattatctaccgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtggcactg 31765929  T
Q  184 cccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  31765930 cccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 31765977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 33469137 - 33468983
Alignment:
Q  71 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 170  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  33469137 tttttggatttccaaactgttgtatttggattttcaaattctattatctactgaagttgttactaggttgagtcacgactaggtcgttctctttaagacg 33469038  T
Q  171 tttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||| ||||||||||||||  ||||| ||| |||||| ||||||||||| ||||||    
T  33469037 ttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctcca 33468983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 8030645 - 8030480
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||||||||  |||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  8030645 tgttgtttttgaattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgaatcacaatcaggtcgctctcttta 8030546  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| |||||||||||||| |||||| |||| ||||||||||| |||| |||||||| ||||    
T  8030545 agacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccaggataa 8030480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 19101903 - 19102068
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||  ||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||| |||| ||||    
T  19101903 tgttgtttttggatttataaactgttgtatttggatttccaaattctattatctatcaaagttgttactaggttaagtcacgacgaggtcactctgttta 19102002  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||| | ||| |||||| || ||||||||||||||||| ||||||||| ||||    
T  19102003 agacgtttcgtggcactactcaaaattgtgcaaaacagactatcaaccacgtcgcctccaggataa 19102068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 47244186 - 47244339
Alignment:
Q  78 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 177  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  47244186 atttctaaactgttgtatttggatttccaaattatattatctatcgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtg 47244285  T
Q  178 gcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||  ||| ||| | ||||| ||||||||||||||||||||||||| ||||    
T  47244286 gcactgttcaaaattattgaagaaagactatcaaccacgccgcctccaggataa 47244339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 42758868 - 42758759
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  42758868 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcc 42758769  T
Q  222 tccagaataa 231  Q
    ||||||||||    
T  42758768 tccagaataa 42758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 33463491 - 33463360
Alignment:
Q  100 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaag 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| |||    
T  33463491 atttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaag 33463392  T
Q  200 acagactatcaaccacgccgcctccagaataa 231  Q
     |||| | |||||| |||||||||||| ||||    
T  33463391 gcagattgtcaaccccgccgcctccaggataa 33463360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 51 - 231
Target Start/End: Original strand, 12878138 - 12878330
Alignment:
Q  51 gaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt------------atctaccgaagttgttactaggt 138  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| || ||||||||||||            |||||| ||||||||||||||||    
T  12878138 gaaacgtcttaaaattgttgtttttggatttccaaattgttatatttgggttcccaaattctattttgatagagaatatctacggaagttgttactaggt 12878237  T
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||| |||||||||||||||||||||||||||| ||||   ||| |||||| ||  ||||||||||| |||||| ||||||||||||    
T  12878238 tgagtcacgatcaggtcgctctctttaagacgtttcgtgacacttttcaaaattgtgcaaagcagactatcaatcacgccacctccagaataa 12878330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 47574567 - 47574716
Alignment:
Q  83 caaaatgttgtatttggattt-ccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcac 181  Q
    |||| |||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||||| || |||    
T  47574567 caaactgttgtattttgattttccaaattctattatctaccgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgacac 47574666  T
Q  182 tgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    | ||||| |||||| |||||| | |||||| |||||||| ||||| ||||    
T  47574667 tacccaaaattgtgcaagacaaaatatcaatcacgccgcatccaggataa 47574716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 13065888 - 13065778
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||  ||||| |||  |||||||||||||    
T  13065888 tatctaccgaagttgttactaggttgagtcacgactatgtcgctctctttaagacgtttcatggcactgcccaaagttgtgaaagggagactatcaacca 13065789  T
Q  215 cgccgcctcca 225  Q
    ||| |||||||    
T  13065788 cgcagcctcca 13065778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 210
Target Start/End: Original strand, 51696931 - 51697072
Alignment:
Q  72 ttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 167  Q
    |||| |||||||||| | |||||||||||||| |||||||    ||||||||| | || ||||||||||||||||||||||||||||||||||| |||||    
T  51696931 ttttggatttccaaacttttgtatttggattttcaaattcattctattatctatcaaa-ttgttactaggttgagtcacgaccaggtcgctctccttaag 51697029  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatca 210  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||    
T  51697030 acgtttcatggcactgcccaaaattgtgcaaggcagactatca 51697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 19906210 - 19906342
Alignment:
Q  99 gatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaa 198  Q
    ||||| |||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||  ||| ||||| | || |||||| ||    
T  19906210 gattttcaaattttattatctaccgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgttcagtgacactgtctaaaattgtgcaa 19906309  T
Q  199 gacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||  |||||||||||| ||||    
T  19906310 gacagactatcaactccgccgcctccaggataa 19906342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 31729543 - 31729391
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 162  Q
    ||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||||| |||||                || || |||||||||||||    
T  31729543 aattgttgtttttggatttccaaactgctgtatttggatttccaagttctattatctactgaagt----------------catgatcaggtcgctctct 31729460  T
Q  163 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| ||||| |||||| ||| ||||| ||||| |||||||||||||| ||||    
T  31729459 ttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataa 31729391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 2819818 - 2819935
Alignment:
Q  114 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacc 213  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| |||| |||| |||||| |||  |||||||| |||    
T  2819818 ttatctatcgaagttgttactagattgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctacc 2819917  T
Q  214 acgccgcctccagaataa 231  Q
    | ||||| ||||| ||||    
T  2819918 atgccgcgtccaggataa 2819935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 48276807 - 48276653
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||| ||||| |||||  ||| ||||||||||||||||||||||||    ||||||| |||||  ||||||||||| |||||| ||||||||||||||||    
T  48276807 tgttctttttggatttttaaattgttgtatttggatttccaaattc----atctacccaagtt--tactaggttgaatcacgatcaggtcgctctcttta 48276714  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| || ||||||  ||| ||||||     || ||||||||||||||||||||||| ||||    
T  48276713 agacgttttgttgcactgttcaaaattgtg-----caaactatcaaccacgccgcctccaggataa 48276653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 10120913 - 10120813
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaat 229  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||    
T  10120913 ttaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggat 10120815  T
Q  230 aa 231  Q
    ||    
T  10120814 aa 10120813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 12874514 - 12874630
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||| |||||||||| ||||||||||||| | ||| ||||||||||||||||  |||||||||||| | || |||||| ||  ||||| ||||| ||    
T  12874514 tatctactgaagttgttattaggttgagtcacaatcagatcgctctctttaagacaattcgtggcactgtctaaaattgtgcaaagcagaccatcaatca 12874613  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||||||| ||||    
T  12874614 cgccgcctccaggataa 12874630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 653043 - 653134
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||| |||  |||||| ||||||||||| |||||| ||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-tttgtgcaaggtagactaacaaccacgccgtctccaggataa 653134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 1151411 - 1151312
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||||||||| || ||||  |||| |||||| |||||  |||||||| |||||||||    
T  1151411 cgaagttgttactaggttgagtcgcgatcagatcactctctttaagacgtttcatgacactatccaaaattgtgcaagactaactatcaatcacgccgcc 1151312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 55810315 - 55810257
Alignment:
Q  67 gttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaa 125  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  55810315 gttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 55810257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 4550973 - 4551088
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||| |||||||||||||||||||||||| ||  |||||| ||  |||||||| |||  || |||||| |||  ||||| |||||||||||||||| |    
T  4550973 tatctatcgaagttgttactaggttgagtcatgattaggtcgttca-tttaagacattttatgccactgctcaaagttgtgcaagacagactatcaacta 4551071  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||||||| ||||    
T  4551072 cgccgcctccaggataa 4551088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 32545068 - 32545171
Alignment:
Q  114 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcc-caagattgtg-gaagacagactatcaa 211  Q
    |||||||| |||||||||||||||||||||||||| ||||||  ||| ||||||| |||||||||||| |||  || ||||||  |||||||||||||||    
T  32545068 ttatctactgaagttgttactaggttgagtcacgatcaggtcaatct-tttaagatgtttcgtggcaccgcctaaaaattgtgtcaagacagactatcaa 32545166  T
Q  212 ccacg 216  Q
    |||||    
T  32545167 ccacg 32545171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 19541269 - 19541174
Alignment:
Q  127 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcct 222  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||  |||||||||| ||   || |||||  ||||||||||||||||||||||||||    
T  19541269 ttgttactaggttgagtcacgatcagatcgttctttttaagatatttcgtggcattgtttaaaattgtacaagacagactatcaaccacgccgcct 19541174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 20513118 - 20513182
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||| ||| ||||||||||||||||    
T  20513118 aggtcgctctctttaagatgtttcgtggcactgctcaaaattgtgcaag-cagactatcaaccacg 20513182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 6070563 - 6070627
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 180  Q
    ||||||| ||||||||||||| |||||||| |||||| ||||||||||||||| ||||| |||||    
T  6070563 atctaccaaagttgttactagattgagtcatgaccagatcgctctctttaagatgtttcctggca 6070627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 8980380 - 8980289
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  8980380 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 8980289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 8985500 - 8985409
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  8985500 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 8985409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 13700510 - 13700601
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  13700510 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13700601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 21299928 - 21299837
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  21299928 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 21299837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 36354176 - 36354267
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  36354176 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 36354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 36359294 - 36359385
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  36359294 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 36359385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 39999069 - 39999160
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  39999069 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 39999160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 40004027 - 40004118
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  40004027 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 40004118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 41393245 - 41393336
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  41393245 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 41393336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 51019468 - 51019377
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  51019468 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 51019377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 53797629 - 53797720
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  53797629 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 53797720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 54343203 - 54343282
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||| | |||||| |||  |||||| ||||| |||||    
T  54343203 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccga-attgtgcaaggtagactagcaaccgcgccg 54343282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 54348357 - 54348448
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  54348357 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 54348448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 54991486 - 54991577
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  54991486 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 54991577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 8652192 - 8652129
Alignment:
Q  52 aaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga-tttccaaattctat 114  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||| || ||||||||||||||    
T  8652192 aaacgtcttaaatttgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8652129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 8663999 - 8663936
Alignment:
Q  52 aaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga-tttccaaattctat 114  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||| || ||||||||||||||    
T  8663999 aaacgtcttaaatttgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 24490028 - 24490123
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||||   |||| ||||| |||  |||||| ||||| |||| ||||||| ||||    
T  24490028 ggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggataa 24490123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 16596017 - 16595953
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||| ||| |||||| |||||||||    
T  16596017 aggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaag-cagactgtcaaccacg 16595953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 16953107 - 16953176
Alignment:
Q  162 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||| ||| ||||| |||||| ||| |||||||||||||||  ||||||||| ||||    
T  16953107 tttaagacgtttcgtggtactacccaaaattgtgcaaggcagactatcaaccacaacgcctccaggataa 16953176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 52691158 - 52691089
Alignment:
Q  132 actaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagac 201  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||| | |||||||| |||||| |||||    
T  52691158 actaggttgagtcacgatcatatcgctctctttaagacgttttgtgactctgcccaaaattgtgcaagac 52691089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 8083121 - 8083037
Alignment:
Q  141 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    |||||||| |||||||||||||||||||||||||  ||||||  ||||| | ||| |||  |||||| ||||| |||||||||||    
T  8083121 agtcacgatcaggtcgctctctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcctcca 8083037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 13695159 - 13695250
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| ||||||||| |||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  13695159 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 21305048 - 21304957
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  21305048 tgagtcacgaccaggtcgctttctttaagacttttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 21304957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 47046402 - 47046311
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| | |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  47046402 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 47046311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 15020549 - 15020485
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||| ||||||||||| |||||||||| |||| ||||| |||||| || |||||||||||||||||    
T  15020549 aggttgctctctttaaaacgtttcgtgacacttcccaaaattgtgcaa-acagactatcaaccacg 15020485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 13710669 - 13710759
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||| ||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  13710669 tgagtcacgaccag-tcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13710759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 10318878 - 10318839
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 175  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  10318878 ggttgagtcacgaccatgtcgctctctttaagacatttcg 10318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 23093112 - 23093155
Alignment:
Q  72 ttttagatttccaaaatgttgtatttggatttccaaattctatt 115  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||    
T  23093112 ttttggatttcaaaactgttgtatttggatttccaaattctatt 23093155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 33723025 - 33722939
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||| |||||| || || ||||| ||||||||||||||||||||| ||||| |||| |||||| ||| ||||| ||| ||||||    
T  33723025 ttactaggctgagtcgcggactaggtcactctctttaagacgtttcgtgacactgtccaaaattgtgcaag-cagaccatcgaccacg 33722939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 39319628 - 39319666
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttc 174  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  39319628 ggttgagtcacgatcaggtcgctttctttaagacgtttc 39319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 40408196 - 40408242
Alignment:
Q  138 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgc 184  Q
    |||||| ||||||||||| ||||||||||||||||| || |||||||    
T  40408196 ttgagttacgaccaggtcactctctttaagacgttttgtagcactgc 40408242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 16947994 - 16948092
Alignment:
Q  129 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaa 228  Q
    |||||| |||||||||| ||||| ||| |||| || |||||| ||| ||| |||||| || |||||| |||||    ||||||| ||||||||||||| |    
T  16947994 gttactgggttgagtcatgaccatgtcactcttttcaagacgattcatggtactgcctaaaattgtgcaagac----tatcaactacgccgcctccagga 16948089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 34560494 - 34560527
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagac 169  Q
    ||||||||||||||||||||||| ||||||||||    
T  34560494 ggttgagtcacgaccaggtcgctttctttaagac 34560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 3998155 - 3998123
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaaga 168  Q
    ||||||||||||||||||||||| |||||||||    
T  3998155 ggttgagtcacgaccaggtcgctttctttaaga 3998123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 33463553 - 33463494
Alignment:
Q  16 tcaataagtaacttcttcggtagacataacatatag-aaacgtcttaaaattgttgttttt 75  Q
    |||||||||||  |||| |||||| |||||| |||| ||||||||||||||||||||||||    
T  33463553 tcaataagtaatctctttggtagatataaca-ataggaaacgtcttaaaattgttgttttt 33463494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 39319513 - 39319572
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 75  Q
    |||||||||||| || ||||||||||||| ||  | ||||| |||||||||||||||||||    
T  39319513 ctcaataagtaattttttcggtagacatagca-gtcgaaacatcttaaaattgttgttttt 39319572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 17025811 - 17026026
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  17025811 ctcaataagtaacttct-cggtagacataacatatagaaacgtcttaaaattgttgtttttagattttcaaattgttgtatttggatttccaaattctat 17025909  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  17025910 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatca 17026009  T
Q  215 cgccgcctccagaataa 231  Q
    || ||||||||| ||||    
T  17026010 cgtcgcctccaggataa 17026026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 17556303 - 17556518
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  17556303 ctcaataagtaacttct-cggtagacataacatatagaaacgtcttaaaattgttgtttttagattttcaaattgttgtatttggatttccaaattctat 17556401  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  17556402 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatca 17556501  T
Q  215 cgccgcctccagaataa 231  Q
    || ||||||||| ||||    
T  17556502 cgtcgcctccaggataa 17556518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 34118327 - 34118548
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| || |||| |||||||| |||||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||| |  ||||||| ||    
T  34118327 agggacaactgaacctcaataaataacttcttcggtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactaatgtatttaga 34118426  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||     
T  34118427 tttccaaattctattatctactgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaagg 34118526  T
Q  201 cagactatcaaccacgccgcct 222  Q
    |||||||||||||||| |||||    
T  34118527 cagactatcaaccacgtcgcct 34118548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 4238550 - 4238337
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttag-atttccaaaatgttgtatttgg 99  Q
    ||||| |||| || |||||||||||||||||||| |||| ||| || || ||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  4238550 agggacaattcaacctcaataagtaacttcttcgatagatatagcagatcgaaacgtcttaaaattgttgttttttggatttccaaactgttgtatttgg 4238451  T
Q  100 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaag 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||    
T  4238450 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaag 4238351  T
Q  200 acagactatcaacc 213  Q
     |||||||||||||    
T  4238350 gcagactatcaacc 4238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 31450036 - 31449870
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31450036 ttgttgtttttggatttccaaagtgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttt 31449937  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  31449936 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 31449870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 33416473 - 33416632
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33416473 tgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcggtctcttta 33416572  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  33416573 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctcca 33416632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 18876537 - 18876371
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||||||||| |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  18876537 attgttgtttttggatttccaaactgctgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgctct-tt 18876439  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  18876438 taagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 18876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 38182442 - 38182241
Alignment:
Q  28 ttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagt 127  Q
    |||||||||||||||| ||  | |||||||||||||||||||||||||  |||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  38182442 ttcttcggtagacatagcag-tcgaaacgtcttaaaattgttgtttttgaattgtcaaactgttgtatttggatttccaaattctattatctaccgaagt 38182344  T
Q  128 tgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccaga 227  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||     
T  38182343 tgttac-aggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaaccacgccgcctccagg 38182245  T
Q  228 ataa 231  Q
    ||||    
T  38182244 ataa 38182241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 44926092 - 44925927
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44926092 tgttgttttttgatttccaaactgctgtatttggattttcaaattcttttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 44925993  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    | ||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  44925992 aaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 44925927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 62 - 195
Target Start/End: Complemental strand, 40130859 - 40130726
Alignment:
Q  62 aaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 161  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40130859 aaattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 40130760  T
Q  162 tttaagacgtttcgtggcactgcccaagattgtg 195  Q
    ||||||||||||||||||||||||||| ||||||    
T  40130759 tttaagacgtttcgtggcactgcccaaaattgtg 40130726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 65 - 223
Target Start/End: Original strand, 1807397 - 1807555
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| ||||| |||| ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1807397 ttgttgtttttggattttcaaattgttgtatttgaattttccaattctattatctaccgaagttgttactaggttgagtcacgactaggtcgctctcttt 1807496  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    ||||||||||||| |||||||||| |||||| ||| |||||||||||||||||||||||    
T  1807497 aagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctc 1807555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 71 - 213
Target Start/End: Complemental strand, 4243218 - 4243076
Alignment:
Q  71 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 170  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4243218 tttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacg 4243119  T
Q  171 tttcgtggcactgcccaagattgtggaagacagactatcaacc 213  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||    
T  4243118 tttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4243076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 1911139 - 1910973
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||    
T  1911139 ttgttgtttttggatttccaaactgttgtatttggattttcaaattctattatctatcgaagttgttattaggttaagtcacgatcaggtcgctctcttt 1911040  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||   ||| |||||| ||  ||||||||||||||||| |||||||| ||||    
T  1911039 aagacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaaccacgctgcctccagtataa 1910973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 28559821 - 28559670
Alignment:
Q  68 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 167  Q
    |||||||| |||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  28559821 ttgtttttggatttccaaactgttgtatttggatttataaattatattatctaccgaagttgttactaggttgagtcacgacaatgtcgctctctataag 28559722  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||| |||| |||||| ||| || ||||||||||||||||    
T  28559721 acgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccg 28559670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 40126083 - 40125895
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||| ||||||||||||||||| || || || ||||||||||||||||||||||||| |||||||||| |||||||||||                    
T  40126083 ctcaataaataacttcttcggtagacgtagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttg---------------- 40126000  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
          |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  40125999 ------ccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca 40125906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 19166608 - 19166725
Alignment:
Q  114 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacc 213  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | | |||||||||||||    
T  19166608 ttatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaacc 19166707  T
Q  214 acgccgcctccagaataa 231  Q
    ||||||||||||| ||||    
T  19166708 acgccgcctccaggataa 19166725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 36683551 - 36683670
Alignment:
Q  112 tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaa 211  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  36683551 tattatctaccggagttgttactaggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaa 36683650  T
Q  212 ccacgccgcctccagaataa 231  Q
    |||||| |||||||| ||||    
T  36683651 ccacgctgcctccaggataa 36683670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 17953992 - 17953883
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  17953992 atctaccgaagttgttactaggttgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccac 17953893  T
Q  216 gccgcctcca 225  Q
    ||||||||||    
T  17953892 gccgcctcca 17953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 24090602 - 24090712
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||| |||||| ||    
T  24090602 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatca 24090701  T
Q  215 cgccgcctcca 225  Q
    || ||||||||    
T  24090702 cgtcgcctcca 24090712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 15875787 - 15875672
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    ||||| ||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  15875787 atctatcgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac 15875688  T
Q  216 gccgcctccagaataa 231  Q
    ||||||||||| ||||    
T  15875687 gccgcctccaggataa 15875672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 2965531 - 2965713
Alignment:
Q  52 aaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt------------atctaccgaagttgttactaggtt 139  Q
    |||||||||||||||||||||||| |||||| ||| || |||||||| ||||||||||||||||            ||| ||| || ||||||||||||     
T  2965531 aaacgtcttaaaattgttgtttttggatttcgaaactgctgtatttgaatttccaaattctattttgaaaagaaatatccaccaaatttgttactaggt- 2965629  T
Q  140 gagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||| |||||| |||||||||||| |||||||    
T  2965630 gagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctc 2965713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 23548752 - 23548644
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||   || |||||| ||| | ||||||||||||    
T  23548752 tatctaccgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttcgtggcactgtgtaaaattgtgcaaggcggactatcaacca 23548653  T
Q  215 cgccgcctc 223  Q
    || ||||||    
T  23548652 cgtcgcctc 23548644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 19915073 - 19915155
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacga 148  Q
    |||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19915073 tgttgtttttggatttacaaactgttgtatttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacga 19915155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 43302880 - 43302722
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||| |||| |||||||| ||||||||||| ||||||        |||||||||| |||| ||||| |||||| ||||| ||||||||    
T  43302880 tgttgtttttggattttcaaactgttgtatatggatttccaagttctat--------gaagttgttattaggctgagttacgacccggtcgttctcttta 43302789  T
Q  166 agacgtttcgtggcactg-cccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| || || |||||| |||  ||||||||||||||||||||||||| ||||    
T  43302788 agacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccaggataa 43302722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 2355586 - 2355471
Alignment:
Q  108 attctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagacta 207  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||  || |||| |||||||||||||||| ||||   ||| |||||| |||||||||||    
T  2355586 attctattatctaccaaagttgttactagattgagtcaccaccatatcactctttttaagacgtttcgtgacacttttcaaaattgtgcaagacagacta 2355487  T
Q  208 tcaaccacgccgcctc 223  Q
    ||||||||||||||||    
T  2355486 tcaaccacgccgcctc 2355471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 33616823 - 33616731
Alignment:
Q  138 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  33616823 ttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 33616731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 19430011 - 19430093
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| |||||||||||    
T  19430011 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19430093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 19435513 - 19435595
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| |||||||||||    
T  19435513 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19435595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 19566160 - 19566242
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| |||||||||||    
T  19566160 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19566242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 19571662 - 19571744
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| |||||||||||    
T  19571662 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 19571744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 31030525 - 31030619
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||| ||| || |||  |||||| ||||||||||| |||||| ||||    
T  31030525 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactacccaa-attatgcaaggtagactaacaaccacgccgtctccaggataa 31030619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 28564927 - 28564837
Alignment:
Q  129 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || |||||| ||| |||||  |||||||||||| ||||||||||    
T  28564927 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccg 28564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 28572550 - 28572460
Alignment:
Q  129 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || |||||| ||| |||||  |||||||||||| ||||||||||    
T  28572550 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccg 28572460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 32015700 - 32015791
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  32015700 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 32015791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 13584341 - 13584400
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaag 189  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  13584341 ttaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag 13584400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 19954262 - 19954348
Alignment:
Q  130 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| |||||||||||||| |||||  ||| ||||||||||||||||    
T  19954262 ttactaggttgagtcgcagactagatcgctctctttaagacgttttgtggcactgcccaaaattgtacaag-cagactatcaaccacg 19954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 4544356 - 4544271
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||||||| ||| |||||| |||  ||||||||||||||    
T  4544356 ttactaggctgagtcacggactaggtcgctctctttaagacgtttcatggcactgctcaaaattgtgcaag-tagactatcaaccac 4544271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 29220240 - 29220347
Alignment:
Q  114 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacc 213  Q
    |||| |||||||||||||| ||||||||||||||||  |||| ||||  ||||||||||| ||| |||||  ||| |||||| |||  ||||||||||||    
T  29220240 ttatttaccgaagttgttagtaggttgagtcacgactgggtcactct--ttaagacgttttgtgtcactgatcaaaattgtgcaaggtagactatcaacc 29220337  T
Q  214 acgccgcctc 223  Q
    |||| |||||    
T  29220338 acgctgcctc 29220347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 19949808 - 19949892
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||| ||||||||| || | |||||||||||||||| ||||||||||||||||||| |||| | ||| ||||||||||||||    
T  19949808 ttactaggctgagtcacggactacgtcgctctctttaagaagtttcgtggcactgcccaaaattgagcaag-cagactatcaacca 19949892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 24673438 - 24673345
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||||||||||||||||||| |||| ||| ||||||| ||||| |||||||||| |||||  ||| ||| || |||| ||||||||| ||||    
T  24673438 cgaagttgttactaggttgagttacgatcagatcgctctttttaaaacgtttcgtgacactgttcaaaattatgcaagatagactatcacccac 24673345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 2469986 - 2470046
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaac 212  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||| ||| ||||||||||||    
T  2469986 aggtcgctctctttaagacgttttgtggcactgctcaaaattgtgcaag-cagactatcaac 2470046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 7902561 - 7902642
Alignment:
Q  138 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||| |||||||||||||| | |||||||| || | ||||| |||||  |||||| | ||||||||||||||    
T  7902561 ttgagtcacgaccaagtcgctctctttaaaatgtttcgtgacattacccaaaattgtataagacatattatcaaccacgccg 7902642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 17955884 - 17955793
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| | |||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  17955884 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 17955793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 21644172 - 21644085
Alignment:
Q  143 tcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  21644172 tcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgactccaggataa 21644085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 24884712 - 24884803
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||| ||| |||||||||||||| | |||||| || ||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  24884712 tgagtcacgaccaggtagctttctttaagacgttttgcggcactacctaag-ttgtgcaaggtagactagcaaccacgccgtctccaggataa 24884803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 42514469 - 42514378
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||| |||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  42514469 tgagtcatgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 42514378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 15951618 - 15951584
Alignment:
Q  138 ttgagtcacgaccaggtcgctctctttaagacgtt 172  Q
    |||||||||||||||||||||||||||||||||||    
T  15951618 ttgagtcacgaccaggtcgctctctttaagacgtt 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 5883983 - 5884074
Alignment:
Q  124 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||| | || |||| |||||  |||| | ||||||| |||||    
T  5883983 aagttattactgggttgagtcacgaccaggtagctct-tttaagacgttttgtggtagtgtccaaaattgtacaagagatactatcatccacg 5884074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 12820324 - 12820363
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtc 155  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  12820324 atctaccgaggttgttactaggttgagtcacgatcaggtc 12820363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 17793450 - 17793529
Alignment:
Q  137 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||||| |||| |||| |||||||||||||||||  | |||||| ||| |||||  ||| || |||||||||||||    
T  17793450 gttgagtcacaaccatgtcgttctctttaagacgtttcacgacactgctcaaaattgtacaagtcaaactatcaaccacg 17793529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 27415539 - 27415602
Alignment:
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||| || |||||||||| ||||  | ||||||||||| ||||| ||||||||    
T  27415539 acgtttcgtggcactacctaagattgtggcagacgaattatcaaccacgtcgccttcagaataa 27415602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 28565327 - 28565268
Alignment:
Q  77 gatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactag 136  Q
    ||||| |||| |||| |||||| ||||| ||||| ||||||||| |||||||||||||||    
T  28565327 gattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 28572950 - 28572891
Alignment:
Q  77 gatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactag 136  Q
    ||||| |||| |||| |||||| ||||| ||||| ||||||||| |||||||||||||||    
T  28572950 gattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 32010538 - 32010581
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||    
T  32010538 tgagtcacgaccaggtcgctctttttaagacatttcgcggcact 32010581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 34818802 - 34818764
Alignment:
Q  131 tactaggttgagtcacgaccaggtcgctctctttaagac 169  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  34818802 tactgggttgagtcacgaccaggtcgctttctttaagac 34818764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 37771703 - 37771741
Alignment:
Q  131 tactaggttgagtcacgaccaggtcgctctctttaagac 169  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  37771703 tactgggttgagtcacgaccaggtcgctttctttaagac 37771741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 13149709 - 13149773
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 180  Q
    |||||| ||||||||||| ||||||||||||||| || |||| ||| ||| |||||||| ||||||    
T  13149709 tatctatcgaagttgttattaggttgagtcacgatcatgtcgttct-tttgagacgttttgtggca 13149773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 43999334 - 43999234
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaat 229  Q
    ||||| ||||||||||||| ||||||| | ||||||| |||||||| |||||| || || |||||| |||  |||||| ||||  ||||| |||||| ||    
T  43999334 ttactgggttgagtcacgatcaggtcgttttctttaaaacgtttcgcggcactacctaa-attgtgcaaggtagactagcaactgcgccgtctccaggat 43999236  T
Q  230 aa 231  Q
    ||    
T  43999235 aa 43999234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 7571435 - 7571222
Alignment:
Q  18 aataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattat 117  Q
    |||||||||||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  7571435 aataagtaacttcttcggtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttggatttccaaattctattat 7571336  T
Q  118 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  7571335 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgc 7571236  T
Q  218 cgcctccagaataa 231  Q
    ||||||||| ||||    
T  7571235 cgcctccaggataa 7571222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 3692477 - 3692707
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| ||||||||||||| ||||||||||||||||||||  | || || ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  3692477 agggacaattgaagctcaacaagtaacttcttcggtagacgcagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttgga 3692576  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||     
T  3692577 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaagg 3692676  T
Q  201 cagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||| ||||    
T  3692677 cagactatcaaccacgccgcctccaggataa 3692707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 8887803 - 8888019
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||||||||||||||| |||||||| || || |||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||    
T  8887803 ctcaataagtaacttcttcgatagacatagcagatcgaaacgtcttaaaattgttgattttggatttccaaactgttgtatttgaatttccaaattctat 8887902  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |||||| |||||||| |||||||||    
T  8887903 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgttgcactgtccaaaattgtgcaagacagattatcaacca 8888002  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||||||| ||||    
T  8888003 cgccgcctccaggataa 8888019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 18471881 - 18472096
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| ||| || ||||||||||||||||||||||||    
T  18471881 ctcaataagtaacttcttcggtagatataacatatagaaacgtcttaaaattgttgtttttgaatttctaaactgatgtatttggatttccaaattctat 18471980  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||| || |||||| ||| ||||||||||||||    
T  18471981 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttacgatg-ttcgtggcactgcctaaaattgtgcaaggcagactatcaacca 18472079  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||||||| ||||    
T  18472080 cgccgcctccaggataa 18472096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 23666294 - 23666127
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23666294 attgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 23666195  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  23666194 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 23666127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 24038542 - 24038375
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038542 attgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 24038443  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  24038442 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 24038375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 3672509 - 3672675
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3672509 ttgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 3672608  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  3672609 aagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 3672675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 39775897 - 39775732
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39775897 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgctactaggttgagtcacgaccaggtcgctctcttta 39775798  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  39775797 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 39775732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 12966092 - 12965877
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||||||| |||||||||||||||| ||  | |||||||||||||||| ||||||||  |||| ||||  ||||||||||| ||||||||||||||    
T  12966092 ctcaataagtaatttcttcggtagacatagcag-tcgaaacgtcttaaaattattgtttttgaattttcaaaccgttgtatttgggtttccaaattctat 12965994  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
     ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||||||||    
T  12965993 gatctaccgaagttgttactagattgagtcacaaccaggtcgctctctttaagacgttttatggcactgcccaaaattgtgcaagacagactatcaacca 12965894  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||||||| ||||    
T  12965893 cgccgcctccaggataa 12965877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 8883093 - 8883259
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||| |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8883093 ttgttgattttggatttccaaactgttgtatttggattttcaaattctattatctaccgaagttgttactaggtcgagtcacgaccaggtcgctctcttt 8883192  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| ||||    
T  8883193 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccaggataa 8883259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 758532 - 758372
Alignment:
Q  71 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 170  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  758532 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacg 758433  T
Q  171 tttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  758432 tttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 8069603 - 8069768
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt-atctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8069603 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8069702  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| ||||    
T  8069703 aagacgtttcgtggcactgtccaa-attgtgcaagacagactatcaaccacgccgcctccaggataa 8069768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 18467149 - 18467314
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||||||||  ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18467149 tgttgtttttgaatttccaaactgatgtatttggattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 18467248  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||| ||||    
T  18467249 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataa 18467314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 3418917 - 3419084
Alignment:
Q  65 ttgttgtttttag-atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3418917 ttgttgtttttggtatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaagtcgctctctt 3419016  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||| ||| ||||    
T  3419017 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcaggataa 3419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 20519975 - 20520137
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 162  Q
    ||||||||||||   |||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  20519975 aattgttgttttcgaattttcaaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcactctct 20520074  T
Q  163 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  20520075 ttaagacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctcca 20520137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 14438864 - 14438699
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14438864 tgttgtttttggattcccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttta 14438765  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||| ||||| |||||| ||| ||||| |||||||||||||||||||| ||||    
T  14438764 agacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataa 14438699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 29350164 - 29350329
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  29350164 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctttcttta 29350263  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| ||||| ||| |||| ||||||||||| ||||    
T  29350264 agacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccaggataa 29350329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 3033573 - 3033725
Alignment:
Q  71 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 170  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3033573 tttttggatttccaaactgtagtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 3033672  T
Q  171 tttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    |||| ||||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  3033673 tttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctc 3033725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 23661685 - 23661468
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataaca-tatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgg 99  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| || ||   |||||| |||||||||||||||||  ||||||||| ||||||||||||    
T  23661685 agggacaattgaagctcaacaagtaacttcttcggtagacatagcagtaccaaaacgttttaaaattgttgtttttgaatttccaaactgttgtatttgg 23661586  T
Q  100 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaag 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||| |||||| |||    
T  23661585 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgc--------------ttcgtggcactgcccaaaattgtgcaag 23661500  T
Q  200 acagactatcaaccacgccgcctccagaataa 231  Q
     |||||||||||||||||||||||||| ||||    
T  23661499 gcagactatcaaccacgccgcctccaggataa 23661468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 49971591 - 49971428
Alignment:
Q  68 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 167  Q
    |||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49971591 ttgtttttggatttccaaactgttgtatttggatttccaagttttattatctaccgaagttgttactaggttgagtcacgaccaggtcgatctctttaag 49971492  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||  |||| |||||| ||| ||||||||||| |||||||||||||| ||||    
T  49971491 acgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataa 49971428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 32474825 - 32474684
Alignment:
Q  88 tgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 187  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  32474825 tgttgtttttggatttccaaattctattatctaccgaagttgttactagattgagccacgaccaggtcgctctc--taagacgtttcgtggcactgccca 32474728  T
Q  188 agattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    | |||||| ||||||||||||||||||||||| |||||| ||||    
T  32474727 aaattgtgcaagacagactatcaaccacgccgtctccaggataa 32474684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 12112873 - 12112645
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||| ||||| ||||| |||||||||| ||    ||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||||||||||    
T  12112873 ctcaatgagtaaattctttggtagacatagcagtctgaaacgtcttaaaattgttgttttttgatttacaaaccgttgtatttggattttcaaattctat 12112774  T
Q  115 t------------atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagaca 202  Q
    |            |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  12112773 tttaaaaaggaatatctaccgaagttgttactaggttgaatcacgactaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagaca 12112674  T
Q  203 gactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||| |||||||||| ||||    
T  12112673 gactatcaaccacaccgcctccaggataa 12112645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 29715570 - 29715725
Alignment:
Q  68 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 167  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  29715570 ttgtttttggatttccaaactgttgtatttagatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccagatcgctctttttaag 29715669  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    |||||||||| ||||| |||| ||||||  ||  ||||||||||||||||||||||    
T  29715670 acgtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctc 29715725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 27708803 - 27708924
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  27708803 tgttgttttt-gatttccaaactgttgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgttctcttta 27708901  T
Q  166 agacgtttcgtggcactgcccaa 188  Q
    |||||||||||||||||||||||    
T  27708902 agacgtttcgtggcactgcccaa 27708924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 55431242 - 55431404
Alignment:
Q  69 tgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaga 168  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||||||||||    
T  55431242 tgtttttggatttccaaacagttgtatttggatttccaaattctattatctgctgaagttgttattaggttgagtcacgatcaggtcgctctctttaaga 55431341  T
Q  169 cgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||| ||||| | || ||| || ||| |||||||||||||||||||||||||| ||||    
T  55431342 cgtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcctccaggataa 55431404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 3657409 - 3657250
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||| ||| ||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||    
T  3657409 tgttgtgtttggattttcaaactgttgtatttgaatttctaaattctattatctaccgaagttgttactatgttgagtcacgattagatcgctctcttta 3657310  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||||||||||||||||  ||| |||||| |||||||||||||||||| ||| ||||||    
T  3657309 agacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccatgccacctcca 3657250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 12971752 - 12971645
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| |||    
T  12971752 atctatcgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattgtgcaagacagattatcaatcac 12971653  T
Q  216 gccgcctc 223  Q
    ||||||||    
T  12971652 gccgcctc 12971645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 2207878 - 2207760
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||||||||| |||||  ||| ||||||||||| ||||  |||||||||||| || ||||||||| ||||| ||||||||||||||||||||||| ||    
T  2207878 attgttgtttttggatttttaaactgttgtatttgaatttttaaattctattatttatcgaagttgtcactagattgagtcacgaccaggtcgctctttt 2207779  T
Q  164 taagacgtttcgtggcact 182  Q
    |||||||||| ||||||||    
T  2207778 taagacgtttagtggcact 2207760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 28125090 - 28125200
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||  || |||||| |||||||||||| |||||    
T  28125090 tatctatcgaaattgttactaggttgagtcacgaccaggttgctct-tttaagacatttcgtggcactgcttaaaattgtgcaagacagactattaacca 28125188  T
Q  215 cgccgcctccag 226  Q
    | | ||||||||    
T  28125189 cactgcctccag 28125200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 26962050 - 26962150
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaat 229  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | |||| ||||| |||  |||||| ||| ||||||| |||||| ||    
T  26962050 ttactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacacaag-ttgtgcaaggtagactaacaaacacgccgtctccaggat 26962148  T
Q  230 aa 231  Q
    ||    
T  26962149 aa 26962150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 13022024 - 13022118
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  13022024 ggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 13022118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 33089441 - 33089359
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||| |||  |||||| |||||||||||    
T  33089441 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctag-ttgtgcaaggtagactaacaaccacgccg 33089359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 48432398 - 48432484
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||| |||||| || || ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||    
T  48432398 ttactaggctgagtcgcggactaggtcgctctctttaagacgttttgtggcactgcccaaaattgt-gaaaacagactatcaaccacg 48432484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 6606877 - 6606772
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgta-tttggatttccaaattcta 113  Q
    |||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||| |||| ||||| || |||| ||||| |||||||||| ||    
T  6606877 ctcaataagtaatttcttcggtagacatagcag-tcgaaacgtcttaaaattgttgtttttggattcccaaactgatgtattttggttttccaaattata 6606779  T
Q  114 ttatcta 120  Q
    || ||||    
T  6606778 ttttcta 6606772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 25726897 - 25726841
Alignment:
Q  131 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 187  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  25726897 tactagattgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccca 25726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 20810369 - 20810463
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||| ||| || ||||| |||  |||||| ||||||||||| |||||| ||||    
T  20810369 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactaccctag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 20810463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 38437089 - 38436995
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||  ||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  38437089 ggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatccaag-ttgtgaaaggtagactaacaaccacgccgtctccaggataa 38436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 53119524 - 53119606
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||| | |||| ||||| |||  |||||| |||||||||||    
T  53119524 ggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactcaag-ttgtgcaaggtagactaacaaccacgccg 53119606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 16013635 - 16013693
Alignment:
Q  57 tcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 115  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||    
T  16013635 tcttaaaattgttggttttggatttccaaactgttgtatttggatttccaaagtctatt 16013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 3477041 - 3476950
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  3477041 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 3476950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 15768295 - 15768243
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  15768295 ttactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 15768243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 17368719 - 17368810
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  17368719 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 17368810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 20090757 - 20090666
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  20090757 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 20090666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 20095882 - 20095791
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  20095882 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 20095791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 34129264 - 34129173
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  34129264 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 34129173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2617355 - 2617260
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||| |||| |||||| |||||||||||||||| |||||| | | || ||||| |||  |||||| ||||| |||||||||||| ||||    
T  2617355 ggttgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccaggataa 2617260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 15763125 - 15763082
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  15763125 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 15763082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 27708959 - 27709025
Alignment:
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||| ||||||||||||| ||| || |||  ||||||||||||||||||||||||| ||||    
T  27708959 aagacgtttcatggcactgcccaaaattatgcaaggtagactatcaaccacgccgcctccaggataa 27709025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 27605240 - 27605147
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||  ||||| ||| || ||||| |||  |||||| |||| || |||||||    
T  27605240 ttaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctc 27605147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 19277040 - 19276924
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||  ||||||||| || ||||||| || |  ||||  |||| |||||||| ||| ||||||||| | || |||||| ||||||||||||||||||    
T  19277040 tatctactaaagttgttattaagttgagttacaataaggtttctctttttaagactttttgtggcactgtcgaaaattgtgtaagacagactatcaacca 19276941  T
Q  215 cgccgcctccagaataa 231  Q
    ||  ||||| |||||||    
T  19276940 cgttgcctctagaataa 19276924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 54270644 - 54270735
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  54270644 tgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 54270735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 55128790 - 55128881
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| | |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  55128790 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaag-ttgtgtaaggtagactagcaaccgcgccgtctccaggataa 55128881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 17364063 - 17364106
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  17364063 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 17364106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 48435933 - 48435847
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| |||||  ||| || ||| ||| ||||||||||||||||    
T  48435933 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgacactgttcaaaatagtgcaag-cagactatcaaccacg 48435847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 10321444 - 10321485
Alignment:
Q  141 agtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||| |||||||||||||||| ||||||    
T  10321444 agtcacgaccaggtcgctttctttaagacgtttcgcggcact 10321485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 20507630 - 20507726
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||| |||||| ||||| |||| || || | ||||||| |||||||||   ||||| |||||||||| ||| |||||| ||| |||||||||||||||    
T  20507630 atctactgaagttattacttggtttaggcatggccaggtcactctcttta---cgtttggtggcactgctcaaaattgtgcaaggcagactatcaaccac 20507726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 16013724 - 16013799
Alignment:
Q  157 ctctctttaagacgtttcgtggcact-gcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||| ||||  |  || |||||| |||| |||||||| |||||||||||||||| ||||    
T  16013724 ctctctttaagacgtttcgtgacactatctaaaaattgtgcaagatagactatccaccacgccgcctccaggataa 16013799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 17357836 - 17357879
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||| | |||||||||||||||| ||||||    
T  17357836 tgagtcacgaccaggtcgatttctttaagacgtttcgcggcact 17357879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 30341939 - 30341896
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    ||||||||||||||||| || |||||||||||||||| ||||||    
T  30341939 tgagtcacgaccaggtcactttctttaagacgtttcgcggcact 30341896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 1688980 - 1688926
Alignment:
Q  141 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtg 195  Q
    |||||||||||||||||| |||||||||||||| | |||||| ||| || |||||    
T  1688980 agtcacgaccaggtcgctttctttaagacgttttgcggcactacccgagtttgtg 1688926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Complemental strand, 21494399 - 21494369
Alignment:
Q  138 ttgagtcacgaccaggtcgctctctttaaga 168  Q
    |||||||||||||||||||||||||||||||    
T  21494399 ttgagtcacgaccaggtcgctctctttaaga 21494369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 53358239 - 53358277
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttc 174  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  53358239 ggttgagtcacggccaggtcgctttctttaagacgtttc 53358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 1641149 - 1641092
Alignment:
Q  158 tctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||||||||||||| | | ||||||| || |||||  |||||||||||||||||||    
T  1641149 tctctttaagacgttttgcgacactgccaaaaattgtaaaagacagactatcaaccac 1641092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 3482518 - 3482477
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 180  Q
    |||||||||||||||||||| |||||||||| ||||| ||||    
T  3482518 tgagtcacgaccaggtcgctttctttaagacttttcgcggca 3482477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 4117704 - 4117604
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaat 229  Q
    ||||| || |||||||||||||||||||| || ||||||| ||||| |||||| || ||| ||||| |||  |||||| ||||| ||| | |||||| ||    
T  4117704 ttactggggtgagtcacgaccaggtcgctttcgttaagacatttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgctgtctccaggat 4117606  T
Q  230 aa 231  Q
    ||    
T  4117605 aa 4117604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 10586281 - 10586248
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagac 169  Q
    ||||||||||||||||||||||| ||||||||||    
T  10586281 ggttgagtcacgaccaggtcgctttctttaagac 10586248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 16983006 - 16983070
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||||| ||||||||||||| || ||||| |||| |||||| |||| ||| |||||||||||    
T  16983006 aggtcgctctttttaagacgtttcatgacactgtccaaaattgtgaaaga-agaatatcaaccacg 16983070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 17026213 - 17026128
Alignment:
Q  127 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaac 212  Q
    |||||| |||||| |||||||| ||  ||||||||||||||||||||  || ||| | | ||  ||||| ||||||||||||||||    
T  17026213 ttgttaataggttaagtcacgatcaattcgctctctttaagacgttttctgacaccgtctaaatttgtgcaagacagactatcaac 17026128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 6024110 - 6024162
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    ||||| |||||| ||| ||||||||| |||| |||||||||||||| ||||||    
T  6024110 ttactgggttgattcatgaccaggtctctctttttaagacgtttcgcggcact 6024162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 7806656 - 7806616
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacg 170  Q
    |||| |||||||||  |||||||||||||||||||||||||    
T  7806656 ttaccaggttgagttgcgaccaggtcgctctctttaagacg 7806616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 561328 - 561558
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| |||| || ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  561328 agggacaattcaacctcaataagtaacttcttcggtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaacagttgtatttgga 561427  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||     
T  561428 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagg 561527  T
Q  201 cagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||| ||||    
T  561528 cagactatcaaccacgccgcctccaggataa 561558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 42001295 - 42001525
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| |||| || |||||||||||| |||||||||||||||| || || |||| || ||||||||||||||||| ||||||||||  ||||||||||||    
T  42001295 agggacaattcaacctcaataagtaatttcttcggtagacatagcagatcgaaatgttttaaaattgttgtttttggatttccaaacagttgtatttgga 42001394  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  42001395 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaga 42001494  T
Q  201 cagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||| ||||    
T  42001495 cagactatcaaccacgccgcctccaggataa 42001525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 39522909 - 39523140
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgtt-gtatttgg 99  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||     |||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  39522909 agggacaattgaagctcaacaagtaacttcttcggtagacatagcagtaccaaacgtcttaaaattgttgtttttggatttccaaactgttagtatttgg 39523008  T
Q  100 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaag 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||    
T  39523009 atttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcaag 39523108  T
Q  200 acagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||| ||||    
T  39523109 acagactatcaaccacgccgcctccaggataa 39523140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 41996590 - 41996756
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41996590 ttgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttt 41996689  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  41996690 aagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataa 41996756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 26667198 - 26667363
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26667198 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26667297  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  26667298 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 26667363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 26938795 - 26938960
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26938795 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26938894  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  26938895 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 26938960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 29168142 - 29167977
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29168142 tgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 29168043  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  29168042 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 29167977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 556620 - 556786
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  556620 ttgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 556719  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  556720 aagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 556786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 39518332 - 39518501
Alignment:
Q  62 aaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 161  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39518332 aaattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctc 39518431  T
Q  162 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||| |||||| | | |||||||||||||||||||||||||| ||||    
T  39518432 tttaagacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccaggataa 39518501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 12102950 - 12103116
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttcc-aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12102950 tgttgtttttggatttccaaactgttgtatttggatttcccaaattctattatctaccgaagttgttactaggttgagttacgaccaggtcgctctcttt 12103049  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  12103050 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 12103116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 36423565 - 36423728
Alignment:
Q  68 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 167  Q
    |||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36423565 ttgtttttggattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcgcgaccaggtcgctctctttaag 36423664  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  36423665 acgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataa 36423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 12045309 - 12045143
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12045309 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttt 12045210  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  12045209 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataa 12045143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 37248964 - 37248799
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37248964 tgttgtttttggatttccaaactgttatatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 37248865  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| |||||||||||| || || |||||| ||| |||||||||||||||||||||||||| ||||    
T  37248864 agacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 37248799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 12502070 - 12501903
Alignment:
Q  65 ttgttgtttttagatttccaaaatgtt-gtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  12502070 ttgttgtttttggattttcaaactgttcgtatttggatttccaaattctattatctactgaagttgttactaggttgagtcatgaccaggtcgctctctt 12501971  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||    
T  12501970 taagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccaggataa 12501903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 7451684 - 7451849
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7451684 tgttgtttttggattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 7451783  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| |||| |||||| ||| ||||||||||||||||| |||||||| ||||    
T  7451784 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataa 7451849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 36428640 - 36428800
Alignment:
Q  71 tttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 170  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36428640 tttttggatttccaaactgttgtatttggatttccaaattctattatctaacgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 36428739  T
Q  171 tttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||| | || ||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  36428740 ttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 36428800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 36942413 - 36942269
Alignment:
Q  87 atgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccc 186  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36942413 atgttgtttttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccc 36942314  T
Q  187 aagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    || |||||| ||| |||||||||||||||||||||||||| ||||    
T  36942313 aaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 36942269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 37652999 - 37652834
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37652999 tgttgtttttggatttccaaattgttgtatttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgatcaggtcgctctcttta 37652900  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||| || || |||| |||||| ||| |||||||||||||||||| ||||||| ||||    
T  37652899 agacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataa 37652834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 10759992 - 10759824
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||     
T  10759992 tgttgtttttggatttccaaactgttgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct- 10759894  T
Q  162 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  10759893 tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 10759824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 36937658 - 36937515
Alignment:
Q  88 tgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccca 187  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36937658 tgttgtttttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccca 36937559  T
Q  188 agattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    | |||||| ||| |||||||||||||||||||||||||| ||||    
T  36937558 aaattgtgcaaggcagactatcaaccacgccgcctccaggataa 36937515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 6155589 - 6155423
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  6155589 ttgttgattttggttttccaaactgttgtatttggatttccaaattctattatctaccgaaattgttactaggttgagtcacgatcaggtcgctctcttt 6155490  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||| |||| ||| |  ||||||||||||||||||| |||||||||| ||||    
T  6155489 aagacgtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccaggataa 6155423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 6514770 - 6514605
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  6514770 ttgttgttttt-gattttaaaactgttgtatttggatttccaaattctattatctaccaaagttgttactaggttgagtcacgaccaagtcactctcttt 6514672  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| ||| || ||| |||||||||||||||||||||||||| ||||    
T  6514671 aagacgtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccaggataa 6514605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 40147833 - 40147986
Alignment:
Q  78 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 177  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||| ||||||||    
T  40147833 atttccaaactattgtatttggatttccaaattctattatctatcgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgtttcgtg 40147932  T
Q  178 gcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  40147933 gcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 40147986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 41587329 - 41587164
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  41587329 tgttgtttttggatttctaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactagtttgagtcacgaccaggttgctctcttta 41587230  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||| |||||  ||| |||||| |||||||||||||||||||||||||||||| ||||    
T  41587229 agacgtttcgtgacactgttcaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 41587164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 11981501 - 11981284
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttta--gatttccaaaatgttgtatttggatttccaaattct 112  Q
    |||||||||||| |||| |||||||| || ||    ||||| |||||||||||||||||||   ||||| |||| ||||||| |||||||||||||||||    
T  11981501 ctcaataagtaatttctacggtagacgtagcagtaggaaacatcttaaaattgttgtttttttggattttcaaactgttgtagttggatttccaaattct 11981402  T
Q  113 attatctaccgaagttgttactaggttga-gtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaa 211  Q
    |||||||||||||||||||||||||||||  | | |||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||||  |||||    
T  11981401 attatctaccgaagttgttactaggttgattttatgaccaggtcgctttctttaagacgttttgtggcactgcccaaaattgtgcaagacaga--atcaa 11981304  T
Q  212 ccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||    
T  11981303 ccacgccgcctccagaataa 11981284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 3665857 - 3666015
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||||||| |||||||||| |||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||     
T  3665857 tgttgtttttggatttccaaactgttgtattttggtttttcaaattctattttctaccgaagttgttactaggttgagtcacgactaggtcgctctcttc 3665956  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||    
T  3665957 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctc 3666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 35680048 - 35679879
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 160  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||| | | ||||||||||    
T  35680048 ttgttgtttttggattttcaaattgttgtatttggatttccaaattcattatattatctaccgaagctgttactaggttgagtcatggc-aggtcgctct 35679950  T
Q  161 ctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| | || |||||| ||| |||||||||||||||||||||||||| ||||    
T  35679949 ctttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 35679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 20181209 - 20181073
Alignment:
Q  89 gttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 188  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  20181209 gttgtatttggatttccaaattctattatctactgaaattgttattaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcattgtccaa 20181110  T
Q  189 gattgtggaagacagactatcaaccacgccgcctcca 225  Q
     ||| || |||||||||||| ||||||||| ||||||    
T  20181109 aattatgcaagacagactattaaccacgccacctcca 20181073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 32461702 - 32461553
Alignment:
Q  70 gtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 169  Q
    |||||| ||||||||||   ||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  32461702 gtttttggatttccaaa---ttgtatttggatttctaaattctattatctaccgaagt---------gttgagtcacgaccaggtcgctctctttaagac 32461615  T
Q  170 gtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  32461614 gttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 32461553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 12042102 - 12041936
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggt--tgagtcacgaccaggtcgctctct 162  Q
    ||||||||||| ||||| |||| ||||  |||||||||| |||||| | |||||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  12042102 ttgttgtttttggattttcaaactgtt--atttggattttcaaattatgttatctactgaagttgttactaggtcatgagtcacgaccaggtcgttctct 12042005  T
Q  163 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||| | | || ||| || ||||||||||||||||||||||| ||||    
T  12042004 ttaagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccaggataa 12041936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 215
Target Start/End: Complemental strand, 12102950 - 12102851
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| |||| |||||| |||  ||||||||||||||    
T  12102950 atctaccgaagttgttactaggttgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccac 12102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 15414993 - 15414884
Alignment:
Q  123 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcct 222  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||| ||||| |||||||||||||| ||||||  || |||| |||||||||||||||||    
T  15414993 gaagttgttacttggttgagtcacgactagaacgctctctttaagtcgttttgtggcactgcccaaaattgtgtgaggcagaatatcaaccacgccgcct 15414894  T
Q  223 ccagaataat 232  Q
    |||| |||||    
T  15414893 ccaggataat 15414884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 16116362 - 16116260
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    |||||||||| ||||||| ||||||||| |||| |||||| |||| |||||||||| |||||||||| |||||| |||||| ||||||||||||||| ||    
T  16116362 cgaagttgttgctaggttaagtcacgactaggttgctctccttaaaacgtttcgtgacactgcccaaaattgtgcaagacaaactatcaaccacgccacc 16116263  T
Q  222 tcc 224  Q
    |||    
T  16116262 tcc 16116260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 37550170 - 37550089
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacga 148  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  37550170 tgttgtttttggattttcaaattgttgtatttggatttccaaattctattatctaccgaagttg-tattaggttgagtcacga 37550089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 24435964 - 24435873
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||| |||  |||||||||||||||||| |||||| ||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactatcaaccacgccgtctccaggataa 24435873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 7805068 - 7805162
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  7805068 ggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 7805162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 14374132 - 14374226
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| | |  |||||| ||||||||||| |||||| ||||    
T  14374132 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcagggtagactaacaaccacgccgtctccaggataa 14374226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 13582785 - 13582694
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||| |||  |||||| ||||||||||| |||||| ||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa-tttgtgcaaggtagactaacaaccacgccgtctccaggataa 13582694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36937723 - 36937649
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 75  Q
    ||||| |||| || |||||||||||||||||||| |||||||| || || |||||||||||||||||||||||||    
T  36937723 agggacaattcaacctcaataagtaacttcttcgatagacatagcagatcgaaacgtcttaaaattgttgttttt 36937649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 36253826 - 36253917
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| |||||||||||| ||||    
T  36253826 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgcctccaggataa 36253917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 17510058 - 17510149
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  17510058 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 17510149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 9911128 - 9911233
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||||||||||||||||||||| | ||| | |||| ||| |||||||| ||| |||||||||  ||| ||||||   | ||||||| ||| ||    
T  9911128 tatctaccgaagttgttactaggttgagttaggacaatgtcgttctttttaagacattttgtggcactgttcaaaattgtgcggggcagactaccaatca 9911227  T
Q  215 cgccgc 220  Q
    ||||||    
T  9911228 cgccgc 9911233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 24771452 - 24771361
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| ||||||||| |||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  24771452 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaag-ttgtgcaaggtagactaacaaccgcgccgtctccaggataa 24771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 42019573 - 42019664
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| |||||  |||| |||||| ||||    
T  42019573 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgtgccgtctccaggataa 42019664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 1414155 - 1414061
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||| || |||||||||| ||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||    
T  1414155 ttactggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctcca 1414061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 26709102 - 26709145
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  26709102 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 26709145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 26978836 - 26978879
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  26978836 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 26978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 18265588 - 18265524
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||||||||||||||||| ||| ||||||| || |||||| ||  ||||||||||||||||    
T  18265588 aggtcgctctctttaagacgttttgtgacactgcctaaaattgtgcaa-tcagactatcaaccacg 18265524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 15415084 - 15415020
Alignment:
Q  22 agtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaa 86  Q
    ||||| |||||||||||||||  || |  |||||||||||||||||||| |||| ||||||||||    
T  15415084 agtaatttcttcggtagacatggcaaaacgaaacgtcttaaaattgttggttttggatttccaaa 15415020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 17504953 - 17505044
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| | |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| || || |||||| ||||    
T  17504953 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgtcgtctccaggataa 17505044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 23977543 - 23977484
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 75  Q
    |||||||| ||| |||||||||||||||| ||  | |||||||||||||||||||||||||    
T  23977543 ctcaataaataatttcttcggtagacatatcagtt-gaaacgtcttaaaattgttgttttt 23977484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 24776919 - 24776867
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||||    
T  24776919 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcact 24776867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 28857858 - 28857954
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctcttt-aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||| ||  || ||||| |||  |||| | |||||||||||||| ||| ||||    
T  28857858 ggttgagtcacgaccaagtcgctttcttttaagacgtttcgcggcactacctgagtttgtgcaaggtagaccaacaaccacgccgcctacaggataa 28857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 41853548 - 41853584
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcg 175  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41853548 tgagtcacgaccaggtcgctttctttaagacgtttcg 41853584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 41858593 - 41858684
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||| ||||||||| |||||||||||||||  |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  41858593 tgagtcacgatcaggtcgctttctttaagacgtttcacggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 41858684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 13301585 - 13301551
Alignment:
Q  135 aggttgagtcacgaccaggtcgctctctttaagac 169  Q
    |||||||||||||||||||||||| ||||||||||    
T  13301585 aggttgagtcacgaccaggtcgctttctttaagac 13301551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 31731540 - 31731573
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagac 169  Q
    ||||||||||||||||||||||| ||||||||||    
T  31731540 ggttgagtcacgaccaggtcgctttctttaagac 31731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 9180958 - 9180728
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  9180958 agggacaattgaatctcaacaagtaacttcttcggtagacatagcagatagaaacgtcttaaaattgttgtttttgaatttccaaactgttgtatttgga 9180859  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||     
T  9180858 ttttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaagg 9180759  T
Q  201 cagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||| ||||    
T  9180758 cagactatcaaccacgccgcctccaggataa 9180728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 30650804 - 30651014
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||| ||||||||||||||||| || || || ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  30650804 ctcaataaataacttcttcggtagacgtagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttggatttccaaattctat 30650903  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  30650904 tatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaacca 30651003  T
Q  215 cgccgcctcca 225  Q
    |||||||||||    
T  30651004 cgccgcctcca 30651014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 231
Target Start/End: Complemental strand, 10160942 - 10160728
Alignment:
Q  17 caataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatta 116  Q
    |||||| |||||||||||||||||||| || |||  ||||||||||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||    
T  10160942 caataattaacttcttcggtagacatagcagataagaacgtcttaaaattgttgtttttggatttccaaactcttgtatttggatttctaaattctatta 10160843  T
Q  117 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  10160842 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacg 10160743  T
Q  217 ccgcctccagaataa 231  Q
    |||||||||| ||||    
T  10160742 ccgcctccaggataa 10160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 30658141 - 30658354
Alignment:
Q  18 aataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattat 117  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||    
T  30658141 aataagtaacttcttcgatagacataacataaaaaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttgcatttccaagttctattat 30658240  T
Q  118 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgc 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||| |||||||||||||||||    
T  30658241 ctaccgaagttgttactatgttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgc 30658340  T
Q  218 cgcctccagaataa 231  Q
    ||||||||| ||||    
T  30658341 cgcctccaggataa 30658354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 33 - 231
Target Start/End: Complemental strand, 25478503 - 25478301
Alignment:
Q  33 cggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tattatctaccgaagtt 128  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||| |||| | ||||||||||||||||||||||    |||||||||||||||||    
T  25478503 cggtagacataacataaagaaacgtcttaaaattgttgtttttggattttcaaactattgtatttggatttccaaattcattctattatctaccgaagtt 25478404  T
Q  129 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaa 228  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  25478403 gttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaa 25478304  T
Q  229 taa 231  Q
    |||    
T  25478303 taa 25478301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 1935162 - 1934997
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1935162 tgttgtttttgaattttcaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 1935063  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  1935062 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 1934997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 9189972 - 9189807
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9189972 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttta 9189873  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  9189872 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 9189807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 19892635 - 19892470
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19892635 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 19892536  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||| |||||||| |||| |||||| || ||||||||||||||||||||||||||| ||||    
T  19892535 agacgtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccaggataa 19892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 31326665 - 31326830
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31326665 tgttgtttttggatttccaaaatgttgtaattgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31326764  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||| || |||||||||| |||||| ||| |||||||||||||||||| ||||||| ||||    
T  31326765 agacgtttcatgccactgcccaaaattgtgcaaggcagactatcaaccacgccacctccaggataa 31326830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 18344357 - 18344522
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18344357 tgttgtttttggatttccaaactgttgtatttggattttcaaattctattatcaaccgaagttgttactagattgagtcacgaccaggtcgctctcttta 18344456  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| |||||||| |||||||||| |||||| ||||    
T  18344457 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataa 18344522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 35601848 - 35602013
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  35601848 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaggttgaatcacgaccaggtcgctcttttta 35601947  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||| ||||    
T  35601948 agacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccaggataa 35602013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 28603230 - 28603375
Alignment:
Q  72 ttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 171  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28603230 ttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgt 28603329  T
Q  172 ttcgtggcactgcccaagattgtggaagacagactatcaaccacgc 217  Q
    |||||| ||||| |||| |||||| |||||||||||||||||||||    
T  28603330 ttcgtgacactgtccaaaattgtgcaagacagactatcaaccacgc 28603375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 7738020 - 7737855
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||| |||| |||||| | | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  7738020 tgttgattttggatttctatactgttgtatttggattttcaaattctattatccaccgaagttgttactaggttgagtcacgaccatgtcgctctcttta 7737921  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||| |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  7737920 agaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 7737855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 35639166 - 35639001
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||    
T  35639166 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaagttgaatcacgatcaggtcgctcttttta 35639067  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| |||||||  ||||||||||||||||||||| ||||    
T  35639066 agacgtttcgtggcactgcccaaaattgtgcaagacagcgtatcaaccacgccgcctccaggataa 35639001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 232
Target Start/End: Complemental strand, 42926930 - 42926762
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  42926930 ttgttgtttttggattttcaaactgtt-tatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggccgctctcttt 42926832  T
Q  165 aag--acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataat 232  Q
    |||  ||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||||| |||||    
T  42926831 aagacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccaggataat 42926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 12796851 - 12797016
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||| | ||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||    
T  12796851 tgttgtttttggatttccacactgttgtatttgaattttcaaattctattatctgccgaagttgttattaggttgagtcacgaccagatcgctctcttta 12796950  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| |||||||||||||| |||||  ||||||||||||||||||||||| |||||| ||||    
T  12796951 agacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccaggataa 12797016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 29677308 - 29677472
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||| ||||| |||||| ||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  29677308 tgttatttttggatttc-aaactgttgtatttgaattttcaaattctattatctagcgaagttgttactaggttgagtcacgatcatgtcgctctcttta 29677406  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||| ||||    
T  29677407 agacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccaggataa 29677472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 30631505 - 30631670
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  30631505 tgttgtttttggatttccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgattaggtcactctcttta 30631604  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    | || |||||||||| |||| || |||||| |||| ||||||||||||||||| ||||||| ||||    
T  30631605 aaacttttcgtggcattgccaaaaattgtgcaagaaagactatcaaccacgccacctccaggataa 30631670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 25497498 - 25497329
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaa----ttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 161  Q
    |||||||||| |||||||||| | |||||||| ||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25497498 tgttgtttttggatttccaaactattgtatttagatttccaaactcattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctc 25497399  T
Q  162 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||  ||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||    
T  25497398 tttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccaggataa 25497329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 29677694 - 29677858
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  29677694 tgttgtttttggatttc-aaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcgctctcatta 29677792  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| ||| ||||||||||| || |||||| ||| || ||||||||||| ||||||| ||| ||||    
T  29677793 agacatttagtggcactgccaaaaattgtgcaaggcaaactatcaaccaagccgcctacaggataa 29677858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 15489883 - 15489796
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagg 153  Q
    |||||||||| ||||||||| |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15489883 tgttgtttttggatttccaatatgttgtattagaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccagg 15489796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 19578534 - 19578423
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| || || |||||| |||  |||||||||||||    
T  19578534 tatctaccgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcactacctaaaattgtgcaaggaagactatcaacca 19578435  T
Q  215 cgccgcctccag 226  Q
     || ||||||||    
T  19578434 tgctgcctccag 19578423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 21523839 - 21523735
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||| | |||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||| |||  |||||||||||||    
T  21523839 tatctactggagttgttaataggttgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattgtgcaagggagactatcaacca 21523741  T
Q  215 cgccgc 220  Q
    ||||||    
T  21523740 cgccgc 21523735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 19094614 - 19094499
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||  ||| ||||||||| |||||| ||| || | ||||||||||    
T  19094614 atctaccgaagttgttattaggttgagtcacgatcaggtcgctctccttaaaacgttttttggtactgcccaaaattgtgcaaggcaaaatatcaaccac 19094515  T
Q  216 gccgcctccagaataa 231  Q
     |||||||||| ||||    
T  19094514 accgcctccaggataa 19094499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 40847712 - 40847606
Alignment:
Q  118 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgc 217  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||  |||  ||||| ||| || ||||||||||||||    
T  40847712 ctaccgaagttgttactagattgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggcaaactatcaaccacgc 40847613  T
Q  218 cgcctcc 224  Q
    | |||||    
T  40847612 cacctcc 40847606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 20711420 - 20711516
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaa 211  Q
    |||||||||||||||||||||||||||||||||||||  || |||  ||||||| ||||||| ||||||| ||| |||||| |||||||||||||||    
T  20711420 tatctaccgaagttgttactaggttgagtcacgaccatatcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 20711516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 42914639 - 42914733
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  42914639 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 42914733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 5089277 - 5089369
Alignment:
Q  138 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||  ||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  5089277 ttgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 5089369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 160031 - 160125
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcc 224  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||  | |||| ||||| |||||| |||  || ||||||||| || |||||||    
T  160031 ttactaggttgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctcc 160125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 17545419 - 17545310
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct-ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacc 213  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | | | ||||||||||||||| ||||   |||  ||||| || | ||||||||||||    
T  17545419 tatctaccgaagttgttactaggttgagttacgatcaggtcgttttttcttaagacgtttcgtgacacttttcaaagttgtgcaaaaaagactatcaacc 17545320  T
Q  214 acgccgcctc 223  Q
    ||||| ||||    
T  17545319 acgccacctc 17545310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 42723546 - 42723455
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  42723546 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 42723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 42728715 - 42728624
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  42728715 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 42728624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 44096302 - 44096393
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  44096302 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 44096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 44754691 - 44754600
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  44754691 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 44754600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 44759857 - 44759766
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  44759857 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 44759766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 14104580 - 14104666
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| |||||| ||| |||||| || ||| |||||||||||||    
T  14104580 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgtcactgctcaaaattgtgcaa-acaaactatcaaccacg 14104666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 40847780 - 40847735
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaatt 110  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||    
T  40847780 ttgttgtttttagattttcaaactgttgtatttggatttccaaatt 40847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 40518567 - 40518476
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || || ||| |||  |||||| ||||| ||||| |||||| ||||    
T  40518567 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-atagtgcaaggtagactagcaaccgcgccgtctccaggataa 40518476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 44957542 - 44957456
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||| ||||||| | || |||||| |||||||||||||||| ||||||||||  || |||||| ||| ||||||||||||||||    
T  44957542 ttactaggctgagtcatggactaggtcgttctctttaagacgttttgtggcactgcaaaaaattgtgcaag-cagactatcaaccacg 44957456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 30628762 - 30628822
Alignment:
Q  55 cgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 115  Q
    |||||||||| ||||| |||| | |||||||| ||||||||||||||||| ||||| ||||    
T  30628762 cgtcttaaaaatgttggtttttggtttccaaattgttgtatttggatttcaaaattatatt 30628822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 39542900 - 39542936
Alignment:
Q  138 ttgagtcacgaccaggtcgctctctttaagacgtttc 174  Q
    ||||||||||| |||||||||||||||||||||||||    
T  39542900 ttgagtcacgatcaggtcgctctctttaagacgtttc 39542936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 28751824 - 28751781
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||    
T  28751824 tgagtcacgaccaggtcgctttcttttagacgtttcgcggcact 28751781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 19538382 - 19538420
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttc 174  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  19538382 ggttgagtcacgaccaggtcgctttctttaagacatttc 19538420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 6297984 - 6297951
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagac 169  Q
    ||||||||||||||||||||||| ||||||||||    
T  6297984 ggttgagtcacgaccaggtcgctttctttaagac 6297951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 7734574 - 7734682
Alignment:
Q  114 ttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacc 213  Q
    |||||| |||||||| ||| | |||||||||||||| ||||||||  |||| ||| |||||| | ||||| | || |||||  ||||||  |||||||||    
T  7734574 ttatcttccgaagttattattgggttgagtcacgactaggtcgcttccttttagatgtttcgcgacactgtctaa-attgtacaagacatgctatcaacc 7734672  T
Q  214 acgccgcctc 223  Q
    ||| ||||||    
T  7734673 acgtcgcctc 7734682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 39542610 - 39542566
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 174  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||||    
T  39542610 ttaccaggttgagtcacgactaagtcactctctttaagacgtttc 39542566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 39542684 - 39542652
Alignment:
Q  49 tagaaacgtcttaaaattgttgtttttagattt 81  Q
    |||||||||||||||||||||||||| ||||||    
T  39542684 tagaaacgtcttaaaattgttgttttcagattt 39542652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 39542825 - 39542857
Alignment:
Q  49 tagaaacgtcttaaaattgttgtttttagattt 81  Q
    |||||||||||||||||||||||||| ||||||    
T  39542825 tagaaacgtcttaaaattgttgttttcagattt 39542857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 40392319 - 40392410
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||   | | |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  40392319 tgagtcacgaccagactgttttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccacgccgtctccaggataa 40392410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16649846 - 16649624
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttgga 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| |    
T  16649846 agggataattgaagctcaacaagtaacttcttcggtagacatagcatatagaaacgtcttaaaattgttgtttttggattttcaaactgttgtatttgaa 16649747  T
Q  101 tttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaaga 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||    
T  16649746 tttccaaattctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctctctttaagacgttt-gtggcactgtccaaaattgtgcaaga 16649648  T
Q  201 cagactatcaaccacgccgcctcc 224  Q
     |||||||||||||||||||||||    
T  16649647 tagactatcaaccacgccgcctcc 16649624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 19 - 225
Target Start/End: Complemental strand, 51041677 - 51041473
Alignment:
Q  19 ataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatc 118  Q
    ||||||||||| ||||||||||||| || || ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  51041677 ataagtaactttttcggtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgatgtatttggatttccaaattctattatc 51041578  T
Q  119 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgcc 218  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  51041577 taccgaagttgttactaagttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaa-attgtgcaaggcagactatcaaccacgcc 51041480  T
Q  219 gcctcca 225  Q
    |||||||    
T  51041479 gcctcca 51041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 25855038 - 25855226
Alignment:
Q  7 aattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttcca 106  Q
    ||||||||||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  25855038 aattgaagctcaacaagtaacttctccggtagacgtagcagattgaaacgtcttaaaattgttgtttttgaatttccaaactgttgtatttggatttcca 25855137  T
Q  107 aattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtg 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25855138 aattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtg 25855226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 47451404 - 47451235
Alignment:
Q  56 gtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtc 155  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  47451404 gtcttaaaattgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaaattattactaggttgagtcacgaccaggtc 47451305  T
Q  156 gctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||||||||||||||||| |||||||||| || |||||| |||||||||||||||||||||||||||||    
T  47451304 gctctctttaagacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctcca 47451235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 40165899 - 40166063
Alignment:
Q  59 ttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgct 158  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40165899 ttaaaattgttgtttttagattttcaaactgttgtatttggattaccatattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgct 40165998  T
Q  159 ctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||| |||| ||||||||||    
T  40165999 ctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaacgccgcctc 40166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 23192987 - 23192821
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| ||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23192987 ttgttgtttttggattttcaaactgttgtgtttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 23192888  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||||||||||| ||||||| ||||    
T  23192887 aagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataa 23192821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 33301354 - 33301184
Alignment:
Q  61 aaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 160  Q
    |||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||| |||    
T  33301354 aaaagtgttgtttttggatttccaatctgttgtatttggatttccaaattctattatctatcaaagttgttactagcttgaatcacgaccaggtcgttct 33301255  T
Q  161 ctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  33301254 ctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 33301184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 3094034 - 3094187
Alignment:
Q  61 aaaattgttgtttttag-atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctc 159  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094034 aaaattgttgttttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctc 3094133  T
Q  160 tctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacc 213  Q
    ||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||    
T  3094134 tctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 3094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 47455555 - 47455390
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  47455555 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttattaggttgagtcacgaccaggtcgctctcttta 47455456  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||| || |||| |||||| |||||||| ||||||||||||||||||||| ||||    
T  47455455 agacgtttcgtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataa 47455390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 19799182 - 19799017
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  19799182 tgttgtttttggattttcaaactgttgtatttggattttcaaattctattatctatcgaagttgttactaggttgagtcacgatcagatcgctctcttta 19799083  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||  |||| |||||| |||||||||||||||||||||||||||||| ||||    
T  19799082 agacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 19799017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 10139964 - 10140172
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    ||||||||| |||||||||||||||||||  | || |||||||||||||||||||||||||  ||| ||||| |  ||||||||||||| |||  |||||    
T  10139964 ctcaataagcaacttcttcggtagacatagtagatcgaaacgtcttaaaattgttgtttttgtattcccaaactactgtatttggattttcaagatctat 10140063  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||| |||||| ||| ||||| ||||||||    
T  10140064 tatctaccgaagttgttactaggttgagtcacgatcaggtcgctctctttaacacgtttcgtggcactactcaaaattgtgcaaggcagacaatcaacca 10140163  T
Q  215 cgccgcctc 223  Q
    |||| ||||    
T  10140164 cgccacctc 10140172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 26927893 - 26927734
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||||||||| ||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  26927893 attgttgtttttggattttcaaactgttgtatttggatttttaaattctattatctaccgaagttgttactaggttgagtcacgactaagtcgctctctt 26927794  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||    
T  26927793 taagacgtttcgtggcattgcccaaaattgtgcaaggcagactatcaaccacgccgcctc 26927734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 10135382 - 10135539
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    ||||||||||  ||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10135382 tgttgtttttgtatttccaaactcctgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 10135481  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctc 223  Q
    ||||||||||||||||| || || |||||| ||| ||||| |||||||||||||||||    
T  10135482 agacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctc 10135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 39588536 - 39588371
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||||||||  |||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  39588536 tgttgtttttggatttccaaatagttgtatttggatttccaaattatattatccaccgaaattgttactaggttaagtcacgatcaggtcgctctcttta 39588437  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| |||| |||||| ||||||||||||| ||||||||  |||||| ||||    
T  39588436 agacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccaggataa 39588371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 18784716 - 18784553
Alignment:
Q  68 ttgtttttagatttccaaaatgttgtat-ttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaa 166  Q
    |||||||| |||||||||| |||||||| |||| |||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  18784716 ttgtttttggatttccaaactgttgtatgttggttttctaaattctattttctagcgaagttgttactaggttgagtcacgatcaggtcgctct-tttaa 18784618  T
Q  167 gacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||| ||||||||||||||| || |||||| ||| |||||||||||||||||||||||||||||||    
T  18784617 gacatttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagaataa 18784553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 16035526 - 16035699
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctat------tatctaccgaagttgttactaggttgagtcacgaccaggtcgc 157  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||       |||||||| ||||||||||||||||||||||||||||||||||    
T  16035526 attgttgtttttggatttccaaactgttgtatttggattttcaaattctaaaatgaatatctaccaaagttgttactaggttgagtcacgaccaggtcgc 16035625  T
Q  158 tctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
     |||||||| |||||||||||||||| ||||  ||||| |||||||| ||||||||||||||||||||| ||||    
T  16035626 cctctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataa 16035699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 38620631 - 38620777
Alignment:
Q  78 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 177  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||| || ||||||||||||||||||||     
T  38620631 attttcaaactgttgtatttggatttccaaattttattatctaccgaagttattattaggttgagtcgcgaccagatcactctctttaagacgtttcgt- 38620729  T
Q  178 gcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||| || |||| |||||| ||| |||||||||||| ||||||||||||    
T  38620730 gcattgtccaaaattgtgcaaggcagactatcaactacgccgcctcca 38620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 16832025 - 16832144
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||||||||    
T  16832025 attgttgtatttggatttccaaaccgttgtatttggatttccaaattctattatctacttaagttgttactatattgagtcacgaccaggtcgctctctt 16832124  T
Q  164 taagacgtttcgtggcactg 183  Q
    ||||||||| |||| |||||    
T  16832125 taagacgttccgtgacactg 16832144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 12259971 - 12260075
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  12259971 tatctactgaagttgttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaacca 12260070  T
Q  215 cgccg 219  Q
    |||||    
T  12260071 cgccg 12260075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 25843738 - 25843821
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgac 149  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25843738 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgac 25843821  T

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Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 11806334 - 11806450
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||| |||||| |||  | ||  ||| ||||||||||||||    
T  11806334 tatctatcgaagttgttattaggttgagtcacaaccagatcgctctctttaagatgtttcgtgacactgcgcaaagtggtacaaggcagactatcaacca 11806433  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||| ||||||||    
T  11806434 cgccgccttcagaataa 11806450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 8900229 - 8900345
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||| ||||| | ||  ||||| || ||| |||||||| ||    
T  8900229 tatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgacactgtctaaagttgtgcaaaacatactatcaatca 8900328  T
Q  215 cgccgcctccagaataa 231  Q
    | |||||||||| ||||    
T  8900329 caccgcctccaggataa 8900345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 10106100 - 10106194
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  10106100 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 10106194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 38734272 - 38734366
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||| |||  |||||| ||||||||||| |||||| ||||    
T  38734272 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 38734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 2493923 - 2493822
Alignment:
Q  130 ttactaggttgagtcacgacc-aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaa 228  Q
    ||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||||| |||| |||| |    
T  2493923 ttactaggttgagtcgcaaactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-caaactatcaaccacggcgcccccagga 2493825  T
Q  229 taa 231  Q
    |||    
T  2493824 taa 2493822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 12906166 - 12906235
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||    
T  12906166 aggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-cagactatcaaccacgacgcc 12906235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 13890810 - 13890904
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| |||||| ||||| |||  |||||| ||||||| ||| |||||| ||||    
T  13890810 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactacccaag-ttgtgcaaggtagactaacaaccacaccgtctccaggataa 13890904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 39747263 - 39747169
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||||| |||  |||||| |||||||| || |||||| ||||    
T  39747263 ggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactagcaaccacgtcgtctccaggataa 39747169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 5346652 - 5346748
Alignment:
Q  129 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||||||||||||| || | ||||||| ||||||||| |||||| ||||||||| ||||  ||||  || |||||||||||| |||||||||||||    
T  5346652 gttactaggttgagttacaatcaggtcgttctctttaaaacgttttgtggcactgtccaaatttgtacaatacagactatcaatcacgccgcctcca 5346748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 26651264 - 26651170
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||| |||| | |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  26651264 ggttgagtcacgaccaggtcactctctttaagatgttttgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 26651170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 27761944 - 27761858
Alignment:
Q  130 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||||||||| | ||| ||||| |||||||||| |||||||||||||||| |||| |||||| ||| ||||||||||||||||    
T  27761944 ttactaggttgagtcgcagactaggtcactctctttaaaacgtttcgtggcactgtccaaaattgtgcaag-cagactatcaaccacg 27761858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 5602523 - 5602435
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||| ||| || ||||| |||  |||||| ||||||||||| |||||    
T  5602523 ggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactaccctag-ttgtgcaaggtagactaacaaccacgccgtctcca 5602435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 33381004 - 33380940
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||| ||| ||||||||||||||||    
T  33381004 aggtcgctctctttaagacgtttcgtgacactgctcaaaattgtgcaag-cagactatcaaccacg 33380940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 5724979 - 5725070
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  5724979 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 5725070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 11251208 - 11251117
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  11251208 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 11251117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 36684810 - 36684719
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  36684810 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 36684719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 37404511 - 37404420
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  37404511 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 37404420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 47452122 - 47452066
Alignment:
Q  4 gataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtctt 60  Q
    |||||||||| |||||||| |||||||||||||||||||| || |||||||||||||    
T  47452122 gataattgaacctcaataaataacttcttcggtagacatatcagatagaaacgtctt 47452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 3584601 - 3584692
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| || ||| || || |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  3584601 tgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 3584692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 4633031 - 4632979
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  4633031 ttactaggttgagtcacgactatgtcgctctctttaagacgttttgcggcact 4632979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 34318319 - 34318228
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  34318319 tgagtcacgaccaagtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 34318228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 36724698 - 36724789
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    |||||||| ||||||| | || |||||||||||||||||||||||  ||||||| ||||| |||||| ||| ||||| |||||||||| ||||    
T  36724698 ttactaggctgagtcatggactaggtcgctctctttaagacgttttatggcactacccaaaattgtgcaag-cagacaatcaaccacgacgcc 36724789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 37409632 - 37409553
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| |||||    
T  37409632 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccg 37409553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 14582096 - 14582190
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||||| ||| || ||||| |||  |||||| ||||||| ||| |||||| ||||    
T  14582096 ggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactaccctag-ttgtgcaaggtagactaacaaccacaccgtctccaggataa 14582190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 19422982 - 19422923
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaag 189  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||  ||||| ||||||    
T  19422982 ttactgggttgagtcacgatcagatcgctctctttaagacgtttcgctgcactacccaag 19422923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 24159904 - 24159822
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaac 212  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||   ||||||||| |||||| ||| ||||||||||||    
T  24159904 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtaatactgcccaaaattgtgcaag-cagactatcaac 24159822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 27716443 - 27716486
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  27716443 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 27716486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 8267929 - 8267891
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttc 174  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8267929 ggttgagtcacgaccaggtcgctttctttaagacgtttc 8267891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 11387925 - 11387841
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcc 224  Q
    |||||||||||||||||||| | |||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| ||||    
T  11387925 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctcc 11387841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 5730105 - 5730141
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcg 175  Q
    |||||||||||||||||||| ||||||||||||||||    
T  5730105 tgagtcacgaccaggtcgctttctttaagacgtttcg 5730141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 46696593 - 46696645
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 115  Q
    ||||||||||||| ||||| |||| |||| ||||| |||||||||||||||||    
T  46696593 aattgttgtttttggattttcaaactgttttatttagatttccaaattctatt 46696645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 23193306 - 23193237
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    |||||||||||| ||||||||||| ||||||  ||||| ||| || ||| |||||||||||||||| ||||    
T  23193306 aggtcgctctctataagacgtttcatggcacaacccaaaattatgcaag-cagactatcaaccacgacgcc 23193237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 31063968 - 31064032
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||||||||||||| |||||||||||||  |||| |||||  ||| || |||||||||||||    
T  31063968 aggtcgctctctttaagaggtttcgtggcactttccaaaattgttcaag-caaactatcaaccacg 31064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 41098050 - 41098017
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagac 169  Q
    ||||||||||||||||||||||| ||||||||||    
T  41098050 ggttgagtcacgaccaggtcgctttctttaagac 41098017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 25661899 - 25661844
Alignment:
Q  158 tctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||| |||||||| ||||| |||||| |||  |||||||||||||    
T  25661899 tctctttaagacgttttgtggcactacccaaaattgtgcaag-tagactatcaacca 25661844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 32987252 - 32987311
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaa 211  Q
    ||||| |||||||||||| |||| ||||||||||| || |||||| ||| |||||||||||    
T  32987252 aggtcactctctttaagatgttttgtggcactgcctaaaattgtgcaag-cagactatcaa 32987311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 17 - 225
Target Start/End: Original strand, 8268170 - 8268378
Alignment:
Q  17 caataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatta 116  Q
    |||| ||||| |||||||||||||||| || || ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  8268170 caattagtaatttcttcggtagacatagcagatcgaaacgtcttaaaattgttgtttttggatttccaaactgttgtatttgcatttccaaattctatta 8268269  T
Q  117 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  8268270 tctaccgaagttgttactatattgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacg 8268369  T
Q  217 ccgcctcca 225  Q
    || ||||||    
T  8268370 ccacctcca 8268378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 4930158 - 4930324
Alignment:
Q  66 tgttgtttttaga-tttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4930158 tgttgttttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 4930257  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||| |||||| ||| || ||||||||||||||||||||||| ||||    
T  4930258 aagacgtttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccaggataa 4930324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 9651140 - 9650971
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 161  Q
    ||||||||||||| ||||| |||| |||||||||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  9651140 aattgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctc 9651041  T
Q  162 tttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  9651040 tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 9650971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 26341135 - 26341290
Alignment:
Q  76 agatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 175  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26341135 agattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcg 26341234  T
Q  176 tggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  26341235 tggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 26341290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 13314453 - 13314240
Alignment:
Q  18 aataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattat 117  Q
    |||||||||||| |  | |||||||| || ||  ||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||| |||    
T  13314453 aataagtaacttatatgatagacatagcagattaaaacgtcttaaaattattgtttttgggtttccaaactgttgtatttggatttccaaattctactat 13314354  T
Q  118 ctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgc 217  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| |||  ||||||||| |||||     
T  13314353 ctaccgtagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgt 13314254  T
Q  218 cgcctccagaataa 231  Q
    ||||||||| ||||    
T  13314253 cgcctccaggataa 13314240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 8075975 - 8076141
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||||||| |||||||||| |||||||||| || ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  8075975 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctactgaagttgttactgggttgagtcacgaccaggtcgctctcttt 8076074  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||||||||| |||||||| ||||    
T  8076075 aagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggataa 8076141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 44510825 - 44510681
Alignment:
Q  87 atgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccc 186  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||    
T  44510825 atgttgtttttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttttgtggcactgtcc 44510726  T
Q  187 aagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    || |||||| |||||||||||||||||||||||||||||| ||||    
T  44510725 aaaattgtgcaagacagactatcaaccacgccgcctccaggataa 44510681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 10388596 - 10388371
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||||||| ||||||| |||||||||||  || |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  10388596 ctcaataagtaatttcttcgatagacataacagtta-aaacgtcttaaaattgttgtttttagattttcaagctgttgtatttggatttccaaattctat 10388498  T
Q  115 t------------atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagaca 202  Q
    |            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | || |    
T  10388497 tttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcattgcccaag-ttgtgcatgata 10388399  T
Q  203 gactatcaaccacgccgcctccagaataa 231  Q
    ||| |||||| ||||||||||||| ||||    
T  10388398 gac-atcaacaacgccgcctccaggataa 10388371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 44423308 - 44423141
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttcc-aaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  44423308 ttgttgtttttggattttcaaactgttgtatttggatttcccaaattctattatctaccaaagttgttactaggttgagtcacgatcagatcgctctctt 44423209  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||| |||||  ||| |||||||||||| ||||||||||||| ||||    
T  44423208 taagacgtttcgtggcactgaccaaaattgttcaaggcagactatcaactacgccgcctccaggataa 44423141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 69 - 218
Target Start/End: Complemental strand, 42627364 - 42627214
Alignment:
Q  69 tgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttact-aggttgagtcacgaccaggtcgctctctttaag 167  Q
    |||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42627364 tgtttttgaatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttacttaggttgattcacgaccaggtcgctctctttaag 42627265  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgcc 218  Q
    ||||||||||||||  ||||| |||||| ||  ||||||||||||||||||    
T  42627264 acgtttcgtggcacaacccaaaattgtgcaaagcagactatcaaccacgcc 42627214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 4579484 - 4579599
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  4579484 atctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac 4579583  T
Q  216 gccgcctccagaataa 231  Q
    ||||||||||| ||||    
T  4579584 gccgcctccaggataa 4579599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 30256730 - 30256922
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||||||| ||||||| ||||||||  |  | |||||||||| |||||||||||||| |||||  ||| | |||||||||||||| ||||||||||    
T  30256730 ctcaataagtaatttcttcgatagacatattag-tcgaaacgtcttcaaattgttgtttttggatttataaactattgtatttggatttgcaaattctat 30256828  T
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactat 208  Q
    |||||||||||||| |||| |||||||||||||||||| ||||| | |||||||| |||||||||||||||||| |||||| ||  ||||||||    
T  30256829 tatctaccgaagtttttacaaggttgagtcacgaccagatcgctgtttttaagacatttcgtggcactgcccaaaattgtgcaaagcagactat 30256922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 23247052 - 23246937
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||    
T  23247052 atctaccgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccac 23246953  T
Q  216 gccgcctccagaataa 231  Q
    ||||||||||| ||||    
T  23246952 gccgcctccaggataa 23246937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 27238173 - 27238324
Alignment:
Q  72 ttttagatttccaaaatgttgtatttggatttc-caaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 170  Q
    |||| |||||| ||| | ||||||||||||||  |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27238173 ttttggatttctaaactattgtatttggatttttcaaactctattatctatggaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 27238272  T
Q  171 tttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcct 222  Q
    ||| |||||||||| ||| |||||| ||| ||||||||||| ||||||||||    
T  27238273 ttttgtggcactgctcaaaattgtgtaaggcagactatcaatcacgccgcct 27238324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 23866065 - 23866159
Alignment:
Q  137 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataa 23866159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 21671059 - 21671286
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctat 114  Q
    |||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||| ||||||||||   || ||||||||||||||||||||||    
T  21671059 ctcaataagtaatttcttcggtagacatagcag-tcgaaacgtcttaaaattgttgtttttggatttccaaacaattttatttggatttccaaattctat 21671157  T
Q  115 ------------tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagaca 202  Q
                ||||| | ||||||||||||||||||||||||||| ||| | |||||||||||| |||| ||||||||||||||  ||||| ||| ||    
T  21671158 tttgaaatagaatatctgctgaagttgttactaggttgagtcacgactaggaccctctctttaagaagtttagtggcactgcccaaagttgtgcaaggca 21671257  T
Q  203 gactatcaaccacgccgcctccagaataa 231  Q
    ||| |||||| ||  ||| ||||||||||    
T  21671258 gacaatcaacaacttcgcatccagaataa 21671286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 3357752 - 3357642
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||  ||||| ||| ||||||||||||||    
T  3357752 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaacca 3357653  T
Q  215 cgccgcctcca 225  Q
    ||||| |||||    
T  3357652 cgccgtctcca 3357642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 29150913 - 29151019
Alignment:
Q  119 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgcc 218  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| |||||| ||| || ||||||||||||| |    
T  29150913 taccgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgctcaaaattgtgcaaggcaaactatcaaccacgtc 29151012  T
Q  219 gcctcca 225  Q
    |||||||    
T  29151013 gcctcca 29151019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 3879922 - 3880089
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactagg-ttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||| || |||||  ||| |||||||||| ||||||||||||||||| || |||||| ||||||||||| ||||||||||| |||||| || |||||    
T  3879922 tgttgttcttggatttttaaattgttgtattttgatttccaaattctattttccaccgaatttgttactaggtttgagtcacgatcaggtcactttcttt 3880021  T
Q  165 aagacgtttcgtggcactgcccaaga-ttgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||| ||| |||||  ||| | ||||| |||  ||||||||||||||||||||||||| ||||    
T  3880022 aagacgttttgtgacactgttcaaaatttgtgtaaggaagactatcaaccacgccgcctccaggataa 3880089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 12254054 - 12254170
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||  ||||| ||| ||||||||||| ||    
T  12254054 tatctatcgaagttgttaccaggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaatca 12254153  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||| ||| ||||    
T  12254154 cgccgcctacaggataa 12254170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 16372381 - 16372469
Alignment:
Q  123 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaac 212  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||| ||| ||||||||||||||||    
T  16372381 gaagttgttactaggttgagtcacgaccaagtcgctctctttaagatgtttcgtggcact-accaagatcgtgcaagacagactatcaac 16372469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 25543475 - 25543366
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||| || |||||| |||| | ||||||||||||  ||||    
T  25543475 cgaagttgttactaggttgagtcacaatcaggtcgcactctttaagacgtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcc 25543376  T
Q  222 tccagaataa 231  Q
    ||||| ||||    
T  25543375 tccaggataa 25543366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 26287339 - 26287181
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattat------------ctaccgaagttgttactaggttgagtcacgaccagg 153  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||||||| |            |||||||||||||||||||||||||||||||||| |    
T  26287339 tgttgtttttggatttcaaaactgttgtatttggatttccaaattctattttgaaaaataatctctaccgaagttgttactaggttgagtcacgaccatg 26287240  T
Q  154 tcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaac 212  Q
     |||| ||||||||| ||||  ||||| || |||| |||||| ||| ||||||||||||    
T  26287239 ccgctttctttaagatgttttttggcattgtccaaaattgtgtaaggcagactatcaac 26287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 15642209 - 15642320
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||||||||||||||    ||| ||||||| ||||||||||| ||||||||||||| || ||||  |||| ||||||||||||| ||||||||| |    
T  15642209 tatctaccgaagttgttacagaattgtgtcacgatcaggtcgctctttttaagacgtttcatgacactatccaaaattgtggaagacaaactatcaacta 15642308  T
Q  215 cgccgcctccag 226  Q
    || |||||||||    
T  15642309 cgtcgcctccag 15642320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 9008142 - 9008234
Alignment:
Q  119 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaa 211  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||| | ||| |||||| ||| ||| |||||||    
T  9008142 taccaaagttgttactaggttgagtcacgaccatgtccctctctttaagacgtttagtgacactactcaaaattgtgcaaggcaggctatcaa 9008234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 24528351 - 24528445
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||| | |||| | |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  24528351 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 24528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9973459 - 9973553
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||  ||||| ||||| |||  |||| | ||||||||||| |||||| ||||    
T  9973459 ggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatccaag-ttgtgcaaggtagacgaacaaccacgccgtctccaggataa 9973553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 29478236 - 29478176
Alignment:
Q  153 gtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||| |||||||||||||||||||||||| |||||| || |||||||||||||||    
T  29478236 gtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaa-acagactatcaacca 29478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 16539507 - 16539416
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  16539507 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 16539416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 16626155 - 16626246
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  16626155 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 16626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 33238002 - 33238093
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  33238002 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 33238093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 42571945 - 42572036
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  42571945 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 42572036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 47998975 - 47999066
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  47998975 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 47999066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 28292600 - 28292507
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||  ||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  28292600 ggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 28292507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 33226416 - 33226493
Alignment:
Q  141 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    ||||||||||||||||||||||||||||||||||| |||||| || ||| || || |||  |||||| |||||||||||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttcgcggcactacctaag-ttatgcaaggtagactaacaaccacgccg 33226493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 2234725 - 2234634
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||| ||| |||||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  2234725 tgagtcacgaccaggttgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 2234634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 32212749 - 32212658
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||| | |||||| ||||    
T  32212749 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgctgtctccaggataa 32212658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 33243179 - 33243270
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  33243179 tgagtcacgaccaggtcactctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 33243270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 47177214 - 47177135
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| |||||    
T  47177214 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccg 47177135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 47993800 - 47993891
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  47993800 tgagtcacaaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 47993891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 6591054 - 6590987
Alignment:
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||| ||||||||| | || |||||| ||| |||||||||||||||||||||| ||| ||||    
T  6591054 taagacgttttgtggcactgtctaaaattgtgcaaggcagactatcaaccacgccgccttcaggataa 6590987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 21081136 - 21081093
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  21081136 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21081093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 6898461 - 6898376
Alignment:
Q  130 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||||| |||||| || || || ||||||||||||||| |||| ||||||||| |||| |||||| ||| |||||||||||||||    
T  6898461 ttactaggctgagtcgcggactagatcgctctctttaagatgttttgtggcactgtccaaaattgtgcaag-cagactatcaaccac 6898376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 17495403 - 17495488
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    |||||||||||||||||||| | |||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||    
T  17495403 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctcca 17495488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 17557811 - 17557726
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    |||||||||||||||||||| | |||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||    
T  17557811 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctcca 17557726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 12934397 - 12934488
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| ||  || ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  12934397 tgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctgag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 12934488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 43892858 - 43892949
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||  |||||| || ||| ||||| |||  | |||| ||||| ||||| |||||| ||||    
T  43892858 tgagtcacgaccaggtcgctttctttaagacgtttcacggcactacctaag-ttgtgcaaggtaaactagcaaccgcgccgtctccaggataa 43892949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 19640135 - 19640193
Alignment:
Q  16 tcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 75  Q
    ||||||||||| |||||||||||||||| ||  | ||||| |||||||||||||||||||    
T  19640135 tcaataagtaatttcttcggtagacatagca-gttgaaacatcttaaaattgttgttttt 19640193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 22857782 - 22857739
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||    
T  22857782 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcact 22857739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 3045489 - 3045534
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattc 111  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||    
T  3045489 ttgttgtttttcgatttt-aaaatgttgtatttggatttccaaattc 3045534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 3284660 - 3284702
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaa 108  Q
    |||||||||| |||||| |||||||||||||| ||||||||||    
T  3284660 tgttgtttttggatttctaaaatgttgtatttcgatttccaaa 3284702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 3284740 - 3284802
Alignment:
Q  153 gtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    |||||||||||||||| ||||||||  ||||  |||  ||||| |||||||||||||||||||    
T  3284740 gtcgctctctttaagatgtttcgtgctactgttcaaacttgtgcaagacagactatcaaccac 3284802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 27256239 - 27256272
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagac 169  Q
    ||||||||||||||||||||||| ||||||||||    
T  27256239 ggttgagtcacgaccaggtcgctttctttaagac 27256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 1289416 - 1289353
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    ||||||||||||||||||||||| ||| |||| | ||| ||| || ||| |||||||||||||||    
T  1289416 aggtcgctctctttaagacgttttgtgacactactcaaaattatgcaag-cagactatcaaccac 1289353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 61 - 231
Target Start/End: Original strand, 7025 - 7195
Alignment:
Q  61 aaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 160  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7025 aaaactgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 7124  T
Q  161 ctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  7125 ctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 7195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 10056 - 9891
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10056 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 9957  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  9956 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 4000 - 4165
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4000 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 4099  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| |||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  4100 agacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 4165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 444102 - 443960
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| |||||  ||| | ||||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||||| | |||             
T  444102 ttgttgtttttggatttttaaactcttgtatttgtattttcaaattctattatttaccgaagttgttactaggttgaatcacgacgaagtc--------- 444012  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
      ||||||||||||||||| |||| |||||| ||| |||||||||||||||||||    
T  444011 --gacgtttcgtggcactg-ccaaaattgtgcaaggcagactatcaaccacgccg 443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 82926 - 83157
Alignment:
Q  1 agggataattgaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtattt-gg 99  Q
    |||||||| |||| || ||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||| |||||| ||| |||||||||| ||    
T  82926 agggataactgaaccttaataagtaacttcttcggtagacatgacagtttgaaacgttttaaaattgttgtttttggatttctaaactgttgtattttgg 83025  T
Q  100 atttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaag 199  Q
     |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| ||| || |||    
T  83026 ttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtgacaccacccaaaattatgcaag 83125  T
Q  200 acagactatcaaccacgccgcctccagaataa 231  Q
     |||||||||||||| ||||||||||| ||||    
T  83126 gcagactatcaaccatgccgcctccaggataa 83157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 6408032 - 6407864
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 162  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6408032 aattgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctct 6407933  T
Q  163 ttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    | |||||||||||||||||||||||| |||||  ||  |||||||||||||||||||||||||| ||||    
T  6407932 tgaagacgtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccaggataa 6407864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 8747707 - 8747873
Alignment:
Q  65 ttgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  8747707 ttgttgtttttggatttacaaactgttgtatttggatttccaaattctattatctattgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8747806  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| |||| |||||||||| |||||| ||||||| |||||||| ||||||||||||| ||||    
T  8747807 aagacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaacgccgcctccaggataa 8747873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 11570906 - 11570753
Alignment:
Q  78 atttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 177  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11570906 attttcaaactgttgtatttggatttcgaaattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtg 11570807  T
Q  178 gcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||| |||||| ||| ||||| |||||||||||||||||||| ||||    
T  11570806 gcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataa 11570753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 19674239 - 19674385
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  19674239 tgttgtttttggattttcaaactgttgtatttggattttcaaattctattatttaccgaagttgttactaggttgagtcacgaccaggtcactctcttta 19674338  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaac 212  Q
    ||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  19674339 agacgtttcatggcactgcccaaaattgtgcaagacagactatcaac 19674385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 12688899 - 12689062
Alignment:
Q  68 ttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 167  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12688899 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcatgaccaggtcactctctttaag 12688998  T
Q  168 acgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||| |||  ||||||||| |||||| ||| ||||||||||||||||||| |||||| ||||    
T  12688999 acgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtctccaggataa 12689062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 25316784 - 25316580
Alignment:
Q  22 agtaacttcttcggtagacataacatatagaaacgtcttaaaa-ttgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tatta 116  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||| | || |||||||||||||||||||    |||||    
T  25316784 agtaacttcttcggtagacataacataaagaaacgtcttaaaaattgttgtttttgaatttccaaactattatatttggatttccaaattcattctatta 25316685  T
Q  117 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||  |||||||||||| |||||||||||||| |||||| ||  || ||||| |||||||    
T  25316684 tctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacg 25316585  T
Q  217 ccgcc 221  Q
    |||||    
T  25316584 ccgcc 25316580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 221
Target Start/End: Complemental strand, 26204278 - 26204074
Alignment:
Q  22 agtaacttcttcggtagacataacatatagaaacgtcttaaaa-ttgttgtttttagatttccaaaatgttgtatttggatttccaaattc----tatta 116  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||| | || |||||||||||||||||||    |||||    
T  26204278 agtaacttcttcggtagacataacataaagaaacgtcttaaaaattgttgtttttgaatttccaaactattatatttggatttccaaattcattctatta 26204179  T
Q  117 tctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||  |||||||||||| |||||||||||||| |||||| ||  || ||||| |||||||    
T  26204178 tctaccgaaattgttactagattgagtcgcgaccaggtcgctcaatttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacg 26204079  T
Q  217 ccgcc 221  Q
    |||||    
T  26204078 ccgcc 26204074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 2700249 - 2700110
Alignment:
Q  92 gtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagat 191  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||    
T  2700249 gtatttggattttcaaattctactatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaat 2700150  T
Q  192 tgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| |||||||||||||||||||||||| ||||| ||||    
T  2700149 tgtgcaagacagactatcaaccacgccgcttccaggataa 2700110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 21308958 - 21309122
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||||||||| ||||| |||| |||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||    
T  21308958 attgttgtttttggattttcaaactgt---atttggatttccaaattctattatctatcgaagttgttactaggttgagtcactaccatatcgctctctt 21309054  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||| ||||||||||||| |||||| ||  |||||||||||||||||||||||||| ||||    
T  21309055 taagacgtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccaggataa 21309122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 33687772 - 33687607
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| |||||||||| ||||||||||||||||  ||||| | |||||||||||| |||||| |||||||||| || ||||||||||||||||||    
T  33687772 tgttgtttttggatttccaaactgttgtatttggatttttaaattttgttatctaccgaaattgttattaggttgagttaccaccaggtcgctctcttta 33687673  T
Q  166 agacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||| |||| |||||| ||||    
T  33687672 agacgtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccaggataa 33687607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 11534847 - 11534736
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11534847 tgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttta 11534748  T
Q  166 agacgtttcgtg 177  Q
    ||||||||||||    
T  11534747 agacgtttcgtg 11534736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 11560357 - 11560246
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 165  Q
    |||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  11560357 tgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttta 11560258  T
Q  166 agacgtttcgtg 177  Q
    ||||||||||||    
T  11560257 agacgtttcgtg 11560246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 11427975 - 11428091
Alignment:
Q  72 ttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 171  Q
    |||| |||||||||| | |||||||||||||| |||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  11427975 ttttggatttccaaactattgtatttggattttcaaattttattatttaccgaagttgttattagattgagtcacgaccaggtcgctctctttaagacgt 11428074  T
Q  172 ttcgtggcactgcccaa 188  Q
    |||||||||||||||||    
T  11428075 ttcgtggcactgcccaa 11428091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 231
Target Start/End: Complemental strand, 29892455 - 29892265
Alignment:
Q  52 aaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattc-----------tattatctaccgaagttgttactaggttg 140  Q
    ||||||||||||||| ||| |||| |||||  ||| ||||||||||||||||| ||||||            | |||||| |||||||||||||||||||    
T  29892455 aaacgtcttaaaattattggttttggatttataaactgttgtatttggatttctaaattcagttttttaaagaatatctatcgaagttgttactaggttg 29892356  T
Q  141 agtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||  ||||||||||||||||||| |||| |||||||||||||| |||||| |||||| |||||||||||| || ||||||| ||||    
T  29892355 agtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattgtgcaagacaaactatcaaccacacctcctccaggataa 29892265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 20748404 - 20748288
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| |||| |||| |||||| ||| | ||||||||||||    
T  20748404 tatctatcaaagttgttactaggttgagtcacgaccaggtcgccctctttaacatgtttcatggtactgtccaaaattgtgcaaggccgactatcaacca 20748305  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||||||||||||    
T  20748304 cgccgcctccagaataa 20748288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 11614212 - 11614096
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||| |||||||||||||||||||||||||||  |||| | ||||||||| ||||||  ||||||||| ||| |||||| ||| ||||||||||||||    
T  11614212 tatctatcgaagttgttactaggttgagtcacgatgaggttgttctctttaaaacgttttatggcactgctcaaaattgtgcaaggcagactatcaacca 11614113  T
Q  215 cgccgcctccagaataa 231  Q
    |||||||||||| ||||    
T  11614112 cgccgcctccaggataa 11614096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 12406469 - 12406366
Alignment:
Q  119 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgcc 218  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||  ||||| |||  |||||||||| ||||||    
T  12406469 taccgaagttgttactagattgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgcc 12406370  T
Q  219 gcct 222  Q
    ||||    
T  12406369 gcct 12406366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 24589283 - 24589168
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccac 215  Q
    ||||| |||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||| ||||  |||| |||||| |||| ||||||||||||||    
T  24589283 atctatcgaagttgttactaagttgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccac 24589184  T
Q  216 gccgcctccagaataa 231  Q
    |||| |||||| ||||    
T  24589183 gccgtctccaggataa 24589168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 14508931 - 14509069
Alignment:
Q  87 atgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgccc 186  Q
    ||||||| ||| ||||| |||||||||||||||||| ||||||||| |||| ||| | | || || ||||||||||| ||||||||||||| |||||  |    
T  14508931 atgttgtctttagattttcaaattctattatctaccaaagttgttattaggatgatttatgatcatgtcgctctcttcaagacgtttcgtgtcactgttc 14509030  T
Q  187 aagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    || |||||| |||||||| ||||||||||||||| ||||    
T  14509031 aaaattgtgcaagacagattatcaaccacgccgcttcca 14509069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 13736794 - 13736682
Alignment:
Q  119 taccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgcc 218  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||| || |||||| |||  |||||| ||||||| |     
T  13736794 taccgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacact 13736695  T
Q  219 gcctccagaataa 231  Q
    |||||||| ||||    
T  13736694 gcctccaggataa 13736682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 12183100 - 12183004
Alignment:
Q  135 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||   |||||| ||||| || ||||||||||||||    
T  12183100 aggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataa 12183004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 17964696 - 17964634
Alignment:
Q  69 tgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgtt 131  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17964696 tgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgtt 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 19478145 - 19478233
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||    
T  19478145 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctcca 19478233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 16836231 - 16836160
Alignment:
Q  160 tctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||| ||||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataa 16836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 3901909 - 3902004
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||  ||||| ||||| |||  ||| || ||||| |||||||||||| ||||    
T  3901909 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccaggataa 3902004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 13605190 - 13605096
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  13605190 ggttgagtcacgactaggttgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 13605096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 17964634 - 17964563
Alignment:
Q  160 tctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||||  |||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  17964634 tctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 17964563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 35129640 - 35129704
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||    
T  35129640 aggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaag-cagactatcaaccacg 35129704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 34142080 - 34142171
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  34142080 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 34142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 34154696 - 34154787
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  34154696 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 34154787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 21401755 - 21401841
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccag 226  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| |||||||||  |||||| ||||| ||||| ||||||    
T  21401755 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtggaaggtagactagcaaccgcgccgtctccag 21401841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 5601072 - 5600982
Alignment:
Q  135 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||| ||| || ||||| |||  ||| || ||||| |||||||||||    
T  5601072 aggttgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctcca 5600982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 10642706 - 10642794
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcc 224  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||  || || ||||| |||  |||||| ||||| ||||||||||    
T  10642706 ggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcc 10642794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 22698338 - 22698247
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  22698338 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 22698247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 31981560 - 31981651
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  31981560 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 31981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 22695380 - 22695281
Alignment:
Q  126 gttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctcca 225  Q
    ||||||||||||||||| |||||  | || ||||||||||| |||||||||| || ||| ||| |||||| |||||| || ||||| ||| |||||||||    
T  22695380 gttgttactaggttgagacacgattatgttgctctctttaacacgtttcgtgacattgctcaaaattgtgcaagacatacaatcaatcacaccgcctcca 22695281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 2760355 - 2760297
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 180  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||| |||||| ||||||    
T  2760355 cgaagttgttactaggttaagttacgaccaggtcgttctctttaaaacgttttgtggca 2760297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 2882867 - 2882821
Alignment:
Q  123 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 169  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  2882867 gaagttgttactaggttgagtcacgaccatatcgctctctttaagac 2882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 2863571 - 2863518
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 169  Q
    |||||| |||||||||||||||||||||||| | || |||||||||||||||||    
T  2863571 atctactgaagttgttactaggttgagtcactatcatgtcgctctctttaagac 2863518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 32815138 - 32815082
Alignment:
Q  159 ctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    ||||||||||||||||| |||||||||||| |||||| ||| ||||||||||||||||    
T  32815138 ctctttaagacgtttcgcggcactgcccaaaattgtgcaag-cagactatcaaccacg 32815082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 9751928 - 9751857
Alignment:
Q  116 atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 188  Q
    ||||||| ||||||| |||||||||||||||||  | ||||||||||||||||| ||| |||||||| |||||    
T  9751928 atctaccaaagttgtcactaggttgagtcacgaata-gtcgctctctttaagacattttgtggcactacccaa 9751857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 21396699 - 21396790
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||  |||||| ||||    
T  21396699 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccatctccaggataa 21396790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 22609556 - 22609659
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcc-caagattgtggaagacagactatcaaccacgccgc 220  Q
    ||||||||||| |||||| ||||||||||||       ||||||||||||||||||| ||||||  || ||||||||||| | |||||||  ||||||||    
T  22609556 cgaagttgttattaggttaagtcacgaccag-------tctttaagacgtttcgtggtactgcctaaaaattgtggaagataaactatcagtcacgccgc 22609648  T
Q  221 ctccagaataa 231  Q
    |||||| ||||    
T  22609649 ctccaggataa 22609659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 24192575 - 24192484
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||  || ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  24192575 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctgag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 24192484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 29491332 - 29491241
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||| |||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  29491332 tgagtcacgaccaagtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 29491241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 24191478 - 24191435
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  24191478 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 24191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 11956800 - 11956762
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttc 174  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11956800 ggttgagtcatgaccaggtcgctctctttaagacgtttc 11956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 15991881 - 15991829
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 115  Q
    |||||||| |||| || ||||||| ||||||||||| ||||||||||||||||    
T  15991881 aattgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 15991961 - 15991901
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 75  Q
    |||||| ||||  ||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  15991961 ctcaatgagtagtttcttcggtagacatgacagaaagaaacctcttaaaattgttgttttt 15991901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 15999543 - 15999491
Alignment:
Q  63 aattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 115  Q
    |||||||| |||| || ||||||| ||||||||||| ||||||||||||||||    
T  15999543 aattgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15999491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 15999623 - 15999563
Alignment:
Q  15 ctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgttttt 75  Q
    |||||| ||||  ||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  15999623 ctcaatgagtagtttcttcggtagacatgacagaaagaaacctcttaaaattgttgttttt 15999563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 22609470 - 22609530
Alignment:
Q  55 cgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt 115  Q
    |||||| || |||||| |||| ||||||| || | ||||||||||||||||||||||||||    
T  22609470 cgtcttgaatttgttggttttggatttccgaactattgtatttggatttccaaattctatt 22609530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 34375919 - 34375962
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||    
T  34375919 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcact 34375962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 17281662 - 17281616
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    ||||||||||||| || |||||| |||||||||||||||| ||||||    
T  17281662 ggttgagtcacgagcatgtcgctttctttaagacgtttcgcggcact 17281616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 5740889 - 5740804
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    |||||||||| ||| ||||| ||||||||||||||||||  | |||| | |||| ||||| |||   ||||||||||| |||||||    
T  5740889 ggttgagtcatgactaggtcactctctttaagacgtttcacgacactactcaagtttgtgcaaggtggactatcaaccgcgccgcc 5740804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 6728430 - 6728397
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtt 172  Q
    |||||||||||||||||||| |||||||||||||    
T  6728430 tgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 12851809 - 12851886
Alignment:
Q  137 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    ||||||||||||||| | ||||||   ||||| |||||| | |||||||||| |||||| ||| || |||||||||||    
T  12851809 gttgagtcacgaccaagacgctcttcataagatgtttcgcgccactgcccaaaattgtgcaaggcaaactatcaacca 12851886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 13736855 - 13736814
Alignment:
Q  71 tttttagatttccaaaatgttgtatttggatttccaaattct 112  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  13736855 tttttggatttccaaaactttgtatttggatttccaaattct 13736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 147
Target Start/End: Complemental strand, 19995472 - 19995439
Alignment:
Q  114 ttatctaccgaagttgttactaggttgagtcacg 147  Q
    ||||||||| ||||||||||||||||||||||||    
T  19995472 ttatctaccaaagttgttactaggttgagtcacg 19995439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 14041703 - 14041747
Alignment:
Q  151 aggtcgctctctttaagacgtttcgtggcactgcccaagattgtg 195  Q
    |||||||||||||||| |||||||||| ||||||| || ||||||    
T  14041703 aggtcgctctctttaaaacgtttcgtgacactgcctaaaattgtg 14041747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 166256 - 166090
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtattt-ggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 164  Q
    |||||||||| |||||||||| |||||||||| || |||||||||||| || ||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  166256 tgttgtttttggatttccaaactgttgtattttggttttccaaattctgttttctaccgaaattgatactaggttgagtcacaaccaggtcgctctcttt 166157  T
Q  165 aagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||| ||||    
T  166156 aagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataa 166090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 35558 - 35725
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||| |||||  |||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||| | |||||||||    
T  35558 attgttatttttgcattttcaaactgttgtatttggatttccaaattctattatttactgaagttgttactaggttaagttacgaccatgccgctctctt 35657  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||| ||||| |||| |||||| ||| |||||||||||||||||||||||||| ||||    
T  35658 taagacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataa 35725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 25323 - 25490
Alignment:
Q  64 attgttgtttttagatttccaaaatgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 163  Q
    |||||||| ||| ||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||||| |||||||    
T  25323 attgttgtctttggattttcaaactgctgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacaattaggtcactctctt 25422  T
Q  164 taagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||| |||| ||||||  || |||||| |||||||||||||||||||||||| ||||| ||||    
T  25423 taagacgttacgtgacactgcgtaaaattgtgcaagacagactatcaaccacgccgcgtccaggataa 25490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 3849 - 4082
Alignment:
Q  11 gaagctcaataagtaacttcttcggtagacataacatatagaaacgtcttaaaattgttgtttttagatttccaaaatgttgtatttggatttccaaatt 110  Q
    |||||| ||||||||| ||||||| |||||||| ||    ||||| | ||||||||||||||||| |||||  ||| ||| ||||||| |||| ||||||    
T  3849 gaagcttaataagtaatttcttcgatagacatagcagtaggaaacattttaaaattgttgtttttggattttaaaattgtcgtatttgaattttcaaatt 3948  T
Q  111 ctatt-------------atctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtgga 197  Q
    |||||             ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| |||| ||  || || |    
T  3949 ctatttttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaagactttttatggcaatgccaaaatttttgca 4048  T
Q  198 agacagactatcaaccacgccgcctccagaataa 231  Q
    ||||| || |||||||||||||||||||| ||||    
T  4049 agacataccatcaaccacgccgcctccaggataa 4082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 255792 - 255908
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||||| || ||||||||| ||| || |||||||||||| |||||||||||| ||||||||||||| ||||| |||||| |||||| ||||||||| |    
T  255792 tatctaccaaatttgttactatgttaagacacgaccaggtcactctctttaagaggtttcgtggcactacccaaaattgtgcaagacatactatcaacta 255891  T
Q  215 cgccgcctccagaataa 231  Q
     ||||||||||| ||||    
T  255892 tgccgcctccaggataa 255908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 15259 - 15355
Alignment:
Q  115 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaa 211  Q
    |||||||||||||||||||||||||||||||||||||  || |||  ||||||| ||||||| ||||||| ||| |||||| |||||||||||||||    
T  15259 tatctaccgaagttgttactaggttgagtcacgaccatatcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 15355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 283 - 462
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt-----------atctaccgaagttgt---tactaggttgagtcacgacca 151  Q
    |||||||||| |||||||||| |||||||||| |||||| ||||||| ||           |||||||||||||||   ||||||||||||||||||| |    
T  283 tgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgacta 382  T
Q  152 ggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
     |||||| | ||||||||||||| ||||| || ||||  ||||| |||||| ||||||||||||| ||||||||| ||||    
T  383 tgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataa 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 165212 - 165033
Alignment:
Q  66 tgttgtttttagatttccaaaatgttgtatttggatttccaaattctatt-----------atctaccgaagttgt---tactaggttgagtcacgacca 151  Q
    |||||||||| |||||||||| |||||||||| |||||| ||||||| ||           |||||||||||||||   ||||||||||||||||||| |    
T  165212 tgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgacta 165113  T
Q  152 ggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
     |||||| | ||||||||||||| ||||| || ||||  ||||| |||||| ||||||||||||| ||||||||| ||||    
T  165112 tgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataa 165033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 2870 - 2776
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  2870 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 2776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 10830 - 10736
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  10830 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 10736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 1562 - 1656
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  1562 ggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 7043 - 7137
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||||||||||| |||||| ||||    
T  7043 ggttgagttacgaccaggtcgttctctttaagacgtttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 155587 - 155542
Alignment:
Q  143 tcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 188  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||    
T  155587 tcacgaccaggtcgttctctttaagacgtttcgtggggctgcccaa 155542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 171820 - 171734
Alignment:
Q  130 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacg 216  Q
    |||||||| |||||| | ||| ||||||||||||||||||||||||||||||||||| || |||||| ||| ||||||||||||||||    
T  171820 ttactaggctgagtcgcagactaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaag-cagactatcaaccacg 171734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 34067 - 34021
Alignment:
Q  136 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  34067 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 34021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 2291 - 2391
Alignment:
Q  122 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcc 221  Q
    ||||||||||| |||||||||||| || ||||||| ||||||||| |||||| ||| || ||   || |||||| |||||||| ||||||||||||||||    
T  2291 cgaagttgttattaggttgagtcatgatcaggtcgttctctttaatacgttttgtgccattgtttaaaattgtgcaagacaga-tatcaaccacgccgcc 2389  T
Q  222 tc 223  Q
    ||    
T  2390 tc 2391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 37001 - 37101
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaat 229  Q
    ||||| || |||||||||||||||||||| |||||||||||||||| |||||| || || |||||| |||  |||||| ||||| ||||| |||||| ||    
T  37001 ttactggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-attgtgcaaggtagactagcaaccgcgccgtctccaggat 37099  T
Q  230 aa 231  Q
    ||    
T  37100 aa 37101  T

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Target: scaffold0594 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 9303 - 9212
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  9303 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggaagactagcaaccgcgccgtctccaggataa 9212  T

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Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 13835 - 13744
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  13835 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13744  T

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Target: scaffold0166; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 19302 - 19250
Alignment:
Q  130 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 182  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||||    
T  19302 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcact 19250  T

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Target: scaffold0055 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 3058 - 3149
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  3058 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 3149  T

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Target: scaffold0052 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 81477 - 81386
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  81477 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 81386  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 31545 - 31636
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| ||||| |||||| ||||    
T  31545 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 31636  T

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Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 26373 - 26464
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccgcctccagaataa 231  Q
    ||||| |||| || ||||||||||||||||||||||| |||||| ||  | |||||| |||  |||||| ||||| ||||| |||||| ||||    
T  26373 tgagttacgatcaagtcgctctctttaagacgtttcgcggcactacctga-attgtgcaaggtagactagcaaccgcgccgtctccaggataa 26464  T

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Target: scaffold0517 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 3563 - 3642
Alignment:
Q  139 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaaccacgccg 219  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||| |||  |||||| ||||| |||||    
T  3563 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccg 3642  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 1329 - 1291
Alignment:
Q  131 tactaggttgagtcacgaccaggtcgctctctttaagac 169  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  1329 tactgggttgagtcacgaccaggtcgctttctttaagac 1291  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 13265 - 13346
Alignment:
Q  133 ctaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaagattgtggaagacagactatcaacca 214  Q
    |||||| ||||| ||| || ||| || |||||||||||||| ||| |||||||||| |||||  |||  |||||||||||||    
T  13265 ctaggtggagtcccgatcaagtcactttctttaagacgtttggtgacactgcccaaaattgttcaaggtagactatcaacca 13346  T

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