View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5016-Insertion-1 (Length: 862)

Name: NF5016-Insertion-1
Description: NF5016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5016-Insertion-1
NF5016-Insertion-1
[»] chr7 (15 HSPs)
chr7 (69-856)||(42220149-42220919)
chr7 (753-856)||(41002117-41002223)
chr7 (753-856)||(34651919-34652025)
chr7 (753-856)||(33113504-33113611)
chr7 (756-859)||(38235900-38236006)
chr7 (753-856)||(28437407-28437514)
chr7 (806-856)||(43665090-43665141)
chr7 (752-856)||(44720190-44720297)
chr7 (759-856)||(18789006-18789106)
chr7 (806-856)||(5967974-5968025)
chr7 (806-860)||(23329311-23329366)
chr7 (753-856)||(33810078-33810184)
chr7 (806-856)||(42620273-42620324)
chr7 (806-856)||(43188966-43189017)
chr7 (806-856)||(47275923-47275974)
[»] chr3 (26 HSPs)
chr3 (752-856)||(23163632-23163739)
chr3 (753-856)||(49860945-49861051)
chr3 (753-856)||(30121388-30121494)
chr3 (754-856)||(15499166-15499271)
chr3 (753-859)||(46017311-46017420)
chr3 (753-856)||(41961843-41961949)
chr3 (752-856)||(17642698-17642805)
chr3 (752-856)||(47714538-47714645)
chr3 (753-856)||(47789312-47789418)
chr3 (806-856)||(55439693-55439744)
chr3 (753-856)||(32858939-32859044)
chr3 (806-854)||(49682922-49682971)
chr3 (753-856)||(30131752-30131858)
chr3 (753-856)||(43007390-43007494)
chr3 (745-856)||(47434151-47434266)
chr3 (806-856)||(2420768-2420819)
chr3 (806-856)||(3043049-3043100)
chr3 (806-856)||(38526262-38526313)
chr3 (753-856)||(43237399-43237505)
chr3 (805-859)||(46312340-46312395)
chr3 (806-859)||(29623342-29623396)
chr3 (753-856)||(38515346-38515452)
chr3 (759-856)||(4247226-4247326)
chr3 (806-858)||(38593059-38593112)
chr3 (755-859)||(39966748-39966853)
chr3 (806-854)||(55445018-55445067)
[»] chr2 (17 HSPs)
chr2 (753-856)||(8990829-8990935)
chr2 (752-859)||(7184227-7184337)
chr2 (754-856)||(32243584-32243690)
chr2 (741-856)||(40357566-40357685)
chr2 (806-856)||(25955755-25955806)
chr2 (806-859)||(726054-726108)
chr2 (753-856)||(14008195-14008301)
chr2 (753-856)||(18018464-18018570)
chr2 (790-856)||(3038850-3038919)
chr2 (755-856)||(18826094-18826198)
chr2 (790-856)||(44020448-44020517)
chr2 (759-856)||(8555648-8555748)
chr2 (806-856)||(4042073-4042124)
chr2 (753-856)||(10165522-10165628)
chr2 (806-856)||(13765860-13765911)
chr2 (806-856)||(36567199-36567250)
chr2 (806-856)||(38293997-38294048)
[»] chr4 (26 HSPs)
chr4 (753-859)||(38366133-38366242)
chr4 (753-856)||(32648870-32648976)
chr4 (753-859)||(904303-904412)
chr4 (753-856)||(17873305-17873411)
chr4 (755-856)||(24291494-24291598)
chr4 (753-859)||(24682863-24682971)
chr4 (755-856)||(38317096-38317200)
chr4 (806-856)||(3126933-3126984)
chr4 (753-856)||(32060755-32060861)
chr4 (753-856)||(49404489-49404595)
chr4 (753-856)||(41844544-41844650)
chr4 (790-856)||(47669919-47669988)
chr4 (755-856)||(16535800-16535904)
chr4 (790-856)||(23708245-23708314)
chr4 (755-856)||(24280020-24280124)
chr4 (806-853)||(21730248-21730296)
chr4 (806-856)||(7182112-7182163)
chr4 (806-856)||(48830735-48830786)
chr4 (752-826)||(21295983-21296059)
chr4 (753-859)||(24662613-24662722)
chr4 (754-856)||(36151237-36151342)
chr4 (753-856)||(37756589-37756695)
chr4 (789-856)||(52594528-52594598)
chr4 (753-842)||(13270106-13270198)
chr4 (759-856)||(41363684-41363784)
chr4 (830-859)||(47047409-47047438)
[»] chr1 (26 HSPs)
chr1 (753-856)||(11017710-11017816)
chr1 (753-856)||(23871329-23871435)
chr1 (753-859)||(45565236-45565344)
chr1 (753-856)||(12293921-12294027)
chr1 (758-856)||(50476637-50476738)
chr1 (753-859)||(1688083-1688192)
chr1 (753-856)||(33991650-33991757)
chr1 (752-856)||(2925800-2925907)
chr1 (753-856)||(13255453-13255559)
chr1 (753-856)||(27500093-27500199)
chr1 (753-859)||(50247702-50247811)
chr1 (804-857)||(9173668-9173722)
chr1 (753-855)||(39889524-39889629)
chr1 (753-859)||(42161919-42162028)
chr1 (806-859)||(50402847-50402901)
chr1 (753-856)||(13061262-13061369)
chr1 (753-854)||(15463922-15464026)
chr1 (752-856)||(32300164-32300271)
chr1 (779-856)||(36668541-36668621)
chr1 (753-856)||(1523704-1523810)
chr1 (806-856)||(30543284-30543335)
chr1 (806-856)||(32299211-32299262)
chr1 (753-856)||(47206290-47206396)
chr1 (753-856)||(47905555-47905661)
chr1 (753-856)||(896362-896467)
chr1 (806-859)||(42806276-42806330)
[»] chr6 (9 HSPs)
chr6 (753-856)||(24734989-24735097)
chr6 (753-856)||(26574261-26574367)
chr6 (753-856)||(1029402-1029507)
chr6 (753-856)||(29241699-29241805)
chr6 (808-856)||(9104869-9104917)
chr6 (753-856)||(5825441-5825547)
chr6 (753-856)||(26480997-26481103)
chr6 (806-856)||(33212429-33212480)
chr6 (759-856)||(34914736-34914836)
[»] chr5 (12 HSPs)
chr5 (753-856)||(4648853-4648959)
chr5 (753-856)||(17093006-17093112)
chr5 (753-856)||(1658286-1658392)
chr5 (753-856)||(33718290-33718396)
chr5 (753-856)||(26149712-26149819)
chr5 (753-856)||(25027031-25027137)
chr5 (753-856)||(35701512-35701618)
chr5 (757-856)||(35868939-35869041)
chr5 (753-859)||(25598635-25598744)
chr5 (806-856)||(32760865-32760916)
chr5 (806-856)||(38302279-38302330)
chr5 (806-859)||(19389749-19389803)
[»] scaffold0717 (1 HSPs)
scaffold0717 (753-856)||(1687-1794)
[»] chr8 (13 HSPs)
chr8 (753-856)||(3404439-3404546)
chr8 (753-856)||(34272624-34272730)
chr8 (753-856)||(37659397-37659503)
chr8 (753-856)||(4734362-4734468)
chr8 (806-856)||(25033489-25033540)
chr8 (806-856)||(34148501-34148551)
chr8 (806-856)||(2474688-2474739)
chr8 (806-856)||(33230968-33231019)
chr8 (806-856)||(34349824-34349875)
chr8 (806-856)||(36102811-36102862)
chr8 (826-859)||(4137812-4137845)
chr8 (808-856)||(29612100-29612149)
chr8 (784-856)||(40984973-40985046)
[»] scaffold1562 (1 HSPs)
scaffold1562 (753-856)||(249-356)
[»] scaffold1158 (1 HSPs)
scaffold1158 (753-856)||(2237-2344)
[»] scaffold0028 (1 HSPs)
scaffold0028 (753-856)||(35321-35427)
[»] scaffold0636 (1 HSPs)
scaffold0636 (753-856)||(8500-8606)
[»] scaffold0952 (1 HSPs)
scaffold0952 (806-856)||(3591-3642)


Alignment Details
Target: chr7 (Bit Score: 514; Significance: 0; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 69 - 856
Target Start/End: Complemental strand, 42220919 - 42220149
Alignment:
Q  69 attgcacatgtatgagaaaaatatcccgcagtatagagattatctttatctcactacaagaaaaacactgttcctggccaaattcaaaaacatttgtggc 168  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42220919 attgcacatgtatgagaaaaatatcccgctgtataaagattatct------cactacaagaaaaacactgttcctggccaaattcaaaaacatttgtggc 42220826  T
Q  169 caacaagaaatattcacaaataactagtcaaaaacactctgccaaatattaaacttcaattcagtttttattagtggcnnnnnnnctcacaagtagaaaa 268  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       ||||||| |||||||    
T  42220825 caacaagaaatattcacaaataactagtcaaaaacactctcccaaatattaaacttcaattcagtttttattagtggcaaaaaa-ctcacaaatagaaaa 42220727  T
Q  269 ataatttgtggcacccatattgatatgtggcagtnnnnnnntaccacaaatattatgtaggaaatataaatttgaatttatgactgttattccgtcatac 368  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  42220726 ataatttgtggcacccatattgatatgtggcagtaaaaaaataccacaaatat---gtaggaaatataaatttgaatttatgactgttattccgtcatac 42220630  T
Q  369 aaatgttttcactgtggtatttgtggccatttttctaccacacaaatcacgagttaaagacataacctgtttcaaaatnnnnnnnnnnnngaagttcatt 468  Q
    |||||||||||||||||||||||||||||||||||  ||| |    |||| |||||||||||||||||||||||||||            ||||||||||    
T  42220629 aaatgttttcactgtggtatttgtggccatttttccgccata----tcacaagttaaagacataacctgtttcaaaataaaaaaa-----gaagttcatt 42220539  T
Q  469 taaacctttttattataaattataaatctttcccgtgtcttgcgtgagtgttaaaacaagtgttatatatgtgtgcgcgcgcatgtgtgggttgattttt 568  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42220538 taaacctttttattataaattataaatcttttctgtgtcttgcgtgagtgttaaaacaagtgttatatatgtgtgcgcgcgcatgtgtgggttgatttta 42220439  T
Q  569 ccaagaaaattgcttccgcgcgaccttgtcaacacaatttatcttcatgagatgaaagagaagttgaagataacatgaagggatagttctgcaagcaatg 668  Q
    ||||||||||  ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42220438 ccaagaaaatctcttccacaccaccttgtcaacacaatttatcttcatgagatgaaagagaagttgaagataacatgaa-ggatagttctgcaagcaatg 42220340  T
Q  669 caccttcccaaacaaatatagtcttttttcgcttaggcttttgtttgagtgtttgaaggggggagagaaagagagagttttgca-ggttggaaatatata 767  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  42220339 caccttcccaaacaaatatagtcttttttcgtttagg-ttttgtttgagtgtttgaaggggggagagaaagagagagctttgcagggttggaaatatata 42220241  T
Q  768 gaaaaataggaaaaattttcctattttttgaaag-acaa-tttttagataatgataaact-atacttatgattgatatatttttaattttaa 856  Q
    |||||||||||||||  || |||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  42220240 gaaaaataggaaaaaaatttctattttttgaaagaacaattttttagataatgataaactaatacttatgattaatatatttttaattttaa 42220149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 41002117 - 41002223
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||| |||||  ||||  |||  |||||||||||||  |  ||||||||||||||||||||| ||||||||||| |||||||||||    
T  41002117 ggttggaaatatatagaataatagacaaaaaattcacattttttgaaagaacagttttttagataatgataaactaatacttatgattaatatattttta 41002216  T
Q  850 attttaa 856  Q
    |||||||    
T  41002217 attttaa 41002223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 34651919 - 34652025
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  34651919 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 34652018  T
Q  850 attttaa 856  Q
    |||||||    
T  34652019 attttaa 34652025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 33113504 - 33113611
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| |  |||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| ||||    
T  33113504 ggttggaaatatatagaaaaatcgacaaaaaaattcacattttttgaaagaacaatttttcagagaatgataaactaatacttatgattaatatactttt 33113603  T
Q  849 aattttaa 856  Q
    ||||||||    
T  33113604 aattttaa 33113611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 756 - 859
Target Start/End: Complemental strand, 38236006 - 38235900
Alignment:
Q  756 tggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaatt 852  Q
    ||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| ||||||||    
T  38236006 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagctttttagagaatgataaactaatacttatgattaatatacttttaatt 38235907  T
Q  853 ttaaaaa 859  Q
    |||||||    
T  38235906 ttaaaaa 38235900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 28437407 - 28437514
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| |  |||||  |||  ||||||||||||| |||||||| ||| |||||||||||| || |||||||| ||||| ||||    
T  28437407 ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatatttatgattaatatactttt 28437506  T
Q  849 aattttaa 856  Q
    ||||||||    
T  28437507 aattttaa 28437514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 43665090 - 43665141
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  43665090 tttttagagaatgataaactactacttatgattaatatatttttaattttaa 43665141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 856
Target Start/End: Complemental strand, 44720297 - 44720190
Alignment:
Q  752 aggttggaaatatatagaaaaataggaaaaattttcctattttttgaaag-acaatttt-tagataatgataaact-atacttatgattgatatattttt 848  Q
    |||||| |||||||||||||||| |  ||||| |||  |||||||||||| ||| |||| |||| ||||||||||| ||||||||||||  |||| ||||    
T  44720297 aggttgaaaatatatagaaaaatggacaaaatattcacattttttgaaagaacagttttgtagagaatgataaactaatacttatgattagtatactttt 44720198  T
Q  849 aattttaa 856  Q
    ||||||||    
T  44720197 aattttaa 44720190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 759 - 856
Target Start/End: Complemental strand, 18789106 - 18789006
Alignment:
Q  759 aaatatatagaaaaataggaaaaat-tttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatatttttaatttt 854  Q
    |||||||||||||||| | |||||| |||  |||||||||||||| |||||||| ||| || ||||||||| | |||||||||||| |||||||||||||    
T  18789106 aaatatatagaaaaat-gaaaaaatcttttatattttttgaaagaacaattttttagagaaagataaactaattcttatgattgatttatttttaatttt 18789008  T
Q  855 aa 856  Q
    ||    
T  18789007 aa 18789006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 5967974 - 5968025
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  5967974 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 5968025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 860
Target Start/End: Complemental strand, 23329366 - 23329311
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaaaaaa 860  Q
    |||||||||||||||||| || || ||||||||  |||||||||||||||||||||    
T  23329366 tttttagataatgataaattaatagttatgattattatatttttaattttaaaaaa 23329311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 33810078 - 33810184
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||| ||||| |||||||||| |  ||||  ||| ||||||||||||||  |  |||||||| |||||||||||| || |||||||| ||||| |||||    
T  33810078 ggttgaaaatacatagaaaaatggataaaaaattcatattttttgaaagaataattttttagagaatgataaactaatatttatgattaatatactttta 33810177  T
Q  850 attttaa 856  Q
    |||||||    
T  33810178 attttaa 33810184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 42620273 - 42620324
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  42620273 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 42620324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 43189017 - 43188966
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  43189017 tttttagaaaatgataaactaatacttatgattaatatacttttaattttaa 43188966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 47275923 - 47275974
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  47275923 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 47275974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 6e-18; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 752 - 856
Target Start/End: Complemental strand, 23163739 - 23163632
Alignment:
Q  752 aggttggaaatatatagaaaaataggaaaaattttcctattttttgaaag-acaa-tttttagataatgataaact-atacttatgattgatatattttt 848  Q
    |||||||||||||||||| ||||||  ||||  ||| ||||||||||||| |||| |||||||| ||||||||||| |||||||||||| ||||| ||||    
T  23163739 aggttggaaatatatagataaatagacaaaaaattcatattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttt 23163640  T
Q  849 aattttaa 856  Q
    ||||||||    
T  23163639 aattttaa 23163632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 49861051 - 49860945
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaag-acaa-tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| || ||||  |||  |||||||||||| |||| |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  49861051 ggttggaaatatatagaaaaatgggcaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 49860952  T
Q  850 attttaa 856  Q
    |||||||    
T  49860951 attttaa 49860945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 30121388 - 30121494
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  ||| ||||||||||||||  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  30121388 ggttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatactttta 30121487  T
Q  850 attttaa 856  Q
    |||||||    
T  30121488 attttaa 30121494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 754 - 856
Target Start/End: Original strand, 15499166 - 15499271
Alignment:
Q  754 gttggaaatatatagaaaaataggaaaaattttcctattttttgaa--agacaatttttagataatgataaact-atacttatgattgatatatttttaa 850  Q
    ||||||||||||||||||||||| ||||  ||||  ||||||||||  ||  |||||||||| ||||||||| | |||||||||||| ||||||||| ||    
T  15499166 gttggaaatatatagaaaaatagtaaaatctttcacattttttgaaatagtaaatttttagagaatgataaaataatacttatgattaatatattttaaa 15499265  T
Q  851 ttttaa 856  Q
    ||||||    
T  15499266 ttttaa 15499271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 753 - 859
Target Start/End: Complemental strand, 46017420 - 46017311
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaag-acaa-tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    ||||||||||||||||||||||||  ||||  |||  |||||||||||| |||| |||||||| ||||||||| | | |||||||||| ||||| |||||    
T  46017420 ggttggaaatatatagaaaaatagataaaaaattcacattttttgaaagaacaattttttagagaatgataaaataaaacttatgattaatatactttta 46017321  T
Q  850 attttaaaaa 859  Q
    ||||||||||    
T  46017320 attttaaaaa 46017311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 41961843 - 41961949
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||    
T  41961843 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttta 41961942  T
Q  850 attttaa 856  Q
    |||||||    
T  41961943 attttaa 41961949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 752 - 856
Target Start/End: Complemental strand, 17642805 - 17642698
Alignment:
Q  752 aggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttt 848  Q
    |||||||||||||||||||||||||  ||||  |||  ||||||| |||||  |  |||||||| ||||||||||| ||| |||||||| ||||| ||||    
T  17642805 aggttggaaatatatagaaaaatagataaaaaattcacatttttttaaagaatagttttttagagaatgataaactaatatttatgattaatatactttt 17642706  T
Q  849 aattttaa 856  Q
    ||||||||    
T  17642705 aattttaa 17642698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 752 - 856
Target Start/End: Original strand, 47714538 - 47714645
Alignment:
Q  752 aggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttt 848  Q
    |||||| ||||||||||||||||||  ||||  |||  |||||||||||||  |  |||||||| |||||||| || |||||||||||| ||||| ||||    
T  47714538 aggttgaaaatatatagaaaaatagacaaaaaattcacattttttgaaagaacatttttttagagaatgataagctaatacttatgattaatatactttt 47714637  T
Q  849 aattttaa 856  Q
    ||||||||    
T  47714638 aattttaa 47714645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 47789312 - 47789418
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||||||| |  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  47789312 ggttggaaatatatagaaaaatggacaaaaaattcaaattttttgaaaaaacagttttttagaaaatgataaactaatacttatgattaatatactttta 47789411  T
Q  850 attttaa 856  Q
    |||||||    
T  47789412 attttaa 47789418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 55439744 - 55439693
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  55439744 tttttagataatgataaactaatacttatgattaatatacttttaattttaa 55439693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 32859044 - 32858939
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagac-aatttttagataatgataaacta-tacttatgattgatatatttttaa 850  Q
    |||||||||||||  | ||||| | ||||  ||||  |||||||||||||  |||||||||| ||||||||| || |||||| |||| ||||||||||||    
T  32859044 ggttggaaatataggggaaaatggtaaaatctttcacattttttgaaagagtaatttttagagaatgataaattaatacttacgattaatatatttttaa 32858945  T
Q  851 ttttaa 856  Q
    ||||||    
T  32858944 ttttaa 32858939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 806 - 854
Target Start/End: Original strand, 49682922 - 49682971
Alignment:
Q  806 tttttagataatgataaact-atacttatgattgatatatttttaatttt 854  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  49682922 tttttagataatgataaactaatacttatgattaatatacttttaatttt 49682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 30131752 - 30131858
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttt 848  Q
    ||||||||| |||||||||||| |  ||||| ||| | |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| ||||    
T  30131752 ggttggaaaaatatagaaaaatggacaaaaaatttac-attttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatactttt 30131850  T
Q  849 aattttaa 856  Q
    ||||||||    
T  30131851 aattttaa 30131858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 43007390 - 43007494
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  ||  |||||||| |||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||    
T  43007390 ggttggaaatatatagaaaaatggacaaaaaatt--tatttttttaaagaacagttttttagagaatgataaactaatacttatgattaatatactttta 43007487  T
Q  850 attttaa 856  Q
    |||||||    
T  43007488 attttaa 43007494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 745 - 856
Target Start/End: Original strand, 47434151 - 47434266
Alignment:
Q  745 gttttgcaggttggaaatatatagaaaaataggaaaaattttcctatttttt-gaaagacaa--tttttagataatgataaacta-tacttatgattgat 840  Q
    |||||| ||||||||||||||||||||||| |  ||||  |||  ||||||| ||||||     |||||||| |||||||||||| ||||||||||| ||    
T  47434151 gttttggaggttggaaatatatagaaaaatggacaaaaaattcacatttttttgaaagaacggttttttagagaatgataaactaatacttatgattaat 47434250  T
Q  841 atatttttaattttaa 856  Q
    ||| ||||||||||||    
T  47434251 atacttttaattttaa 47434266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 2420819 - 2420768
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  2420819 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 2420768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 3043049 - 3043100
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  3043049 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 3043100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 38526313 - 38526262
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  38526313 tttttagacaatgataaactaatacttatgattaatatacttttaattttaa 38526262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 43237505 - 43237399
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga--caatttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||     |||||||| ||||||||||| |||||||||||| ||| | |||||    
T  43237505 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacggttttttagagaatgataaactaatacttatgattaataaactttta 43237406  T
Q  850 attttaa 856  Q
    |||||||    
T  43237405 attttaa 43237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 805 - 859
Target Start/End: Original strand, 46312340 - 46312395
Alignment:
Q  805 atttttagataatgataaacta-tacttatgattgatatatttttaattttaaaaa 859  Q
    ||||||||| |||||||||||| || |||||||| ||||| |||||||||||||||    
T  46312340 atttttagagaatgataaactaatatttatgattaatatacttttaattttaaaaa 46312395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 806 - 859
Target Start/End: Complemental strand, 29623396 - 29623342
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaaaaa 859  Q
    |||||||| |||||||||||| | ||||||||| ||||||||||||| |||||||    
T  29623396 tttttagaaaatgataaactaatgcttatgattcatatatttttaatattaaaaa 29623342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 38515452 - 38515346
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||| ||||||||||||||||    ||||  ||| |||||||| ||||| |||||||| ||| ||| |||||||| ||||||||||| ||||| |||||    
T  38515452 ggttgaaaatatatagaaaaatgaacaaaaaattcatatttttttaaagaacaattttttagagaataataaactaatacttatgattaatatactttta 38515353  T
Q  850 attttaa 856  Q
    |||||||    
T  38515352 attttaa 38515346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 856
Target Start/End: Complemental strand, 4247326 - 4247226
Alignment:
Q  759 aaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaatttta 855  Q
    ||||||| |||||||| | ||||  |||| |||||||| |||||  |  |||||||| ||||||||| || | ||||||||| |||||||||||||||||    
T  4247326 aaatatagagaaaaatggtaaaatctttcatatttttttaaagagtaattttttagagaatgataaattaatgcttatgattaatatatttttaatttta 4247227  T
Q  856 a 856  Q
    |    
T  4247226 a 4247226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 806 - 858
Target Start/End: Complemental strand, 38593112 - 38593059
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaaaa 858  Q
    |||||||| |||||||||||| ||||||||||| ||||  ||||||||||||||    
T  38593112 tttttagagaatgataaactaatacttatgattaatatgcttttaattttaaaa 38593059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 755 - 859
Target Start/End: Original strand, 39966748 - 39966853
Alignment:
Q  755 ttggaaatatatagaaaaataggaaaaattttcct-attttttgaaagacaatttttagataatgataaactatacttatgattgatatatttttaattt 853  Q
    |||| ||||||| ||||||| ||| ||||||| |  ||||||||||||  | |||||||| | ||||||   || ||||| ||| |||||||||||||||    
T  39966748 ttgggaatatattgaaaaatgggagaaatttttcacattttttgaaagtaattttttagagagtgataattaatgcttattattaatatatttttaattt 39966847  T
Q  854 taaaaa 859  Q
    ||||||    
T  39966848 taaaaa 39966853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 806 - 854
Target Start/End: Complemental strand, 55445067 - 55445018
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaatttt 854  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||    
T  55445067 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 55445018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 6e-18; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 8990829 - 8990935
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||| ||| ||||||||||||||  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  8990829 ggttggaaatatatagaaaaatggacaaaatattcatattttttgaaagaacagttttttagaaaatgataaactaatacttatgattaatatactttta 8990928  T
Q  850 attttaa 856  Q
    |||||||    
T  8990929 attttaa 8990935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 752 - 859
Target Start/End: Complemental strand, 7184337 - 7184227
Alignment:
Q  752 aggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttt 848  Q
    ||||||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| ||||    
T  7184337 aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttt 7184238  T
Q  849 aattttaaaaa 859  Q
    |||||||||||    
T  7184237 aattttaaaaa 7184227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 754 - 856
Target Start/End: Complemental strand, 32243690 - 32243584
Alignment:
Q  754 gttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||||||||||||||| |  |||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  32243690 gttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 32243591  T
Q  850 attttaa 856  Q
    |||||||    
T  32243590 attttaa 32243584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 856
Target Start/End: Complemental strand, 40357685 - 40357566
Alignment:
Q  741 gagagttttgcaggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgat 836  Q
    ||||||||||  ||||| |||||||||||||||| |  |||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||    
T  40357685 gagagttttgggggttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgat 40357586  T
Q  837 tgatatatttttaattttaa 856  Q
    | ||||| ||||||||||||    
T  40357585 taatataattttaattttaa 40357566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 25955755 - 25955806
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  25955755 tttttagataatgataaactaatacttatgattaatatacttttaattttaa 25955806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 806 - 859
Target Start/End: Complemental strand, 726108 - 726054
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaaaaa 859  Q
    |||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||    
T  726108 tttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaa 726054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 14008195 - 14008301
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaag-acaat-ttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||| ||||||||||||||||| |  ||||  ||| ||||||||||||| ||| | ||||||| ||||||||||| |||||||||||| ||||| ||||     
T  14008195 ggttcgaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtcttttagagaatgataaactaatacttatgattaatatacttttg 14008294  T
Q  850 attttaa 856  Q
    |||||||    
T  14008295 attttaa 14008301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 18018464 - 18018570
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||| |||||||||||||||| |  |||| ||  |  |||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  18018464 ggttgaaaatatatagaaaaatggacaaaaattcacatttttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 18018563  T
Q  850 attttaa 856  Q
    |||||||    
T  18018564 attttaa 18018570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 790 - 856
Target Start/End: Original strand, 3038850 - 3038919
Alignment:
Q  790 attttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  3038850 attttttgaaagaacaattttttagaaaatgataaactaatacttatgattaatatacttttaattttaa 3038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 856
Target Start/End: Original strand, 18826094 - 18826198
Alignment:
Q  755 ttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaat 851  Q
    |||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||| ||||| ||||||||||| ||||| |||||||    
T  18826094 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgatgaactaatacttatgattaatatacttttaat 18826193  T
Q  852 tttaa 856  Q
    |||||    
T  18826194 tttaa 18826198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 790 - 856
Target Start/End: Complemental strand, 44020517 - 44020448
Alignment:
Q  790 attttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  44020517 attttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatacttttaattttaa 44020448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 856
Target Start/End: Original strand, 8555648 - 8555748
Alignment:
Q  759 aaatatatagaaaaataggaaaaattttcctattttttgaaaga-caa-tttttagataatgataaacta-tacttatgattgatatatttttaatttta 855  Q
    |||||||||||||||| |  ||||  |||  ||||||||||||| ||| |||||||| |||||||||||| || |||||||| ||||| |||||||||||    
T  8555648 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaactttttagagaatgataaactaatatttatgattaatatacttttaatttta 8555747  T
Q  856 a 856  Q
    |    
T  8555748 a 8555748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 4042124 - 4042073
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  4042124 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 4042073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 10165628 - 10165522
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||| |||||  |  |||||||| ||||||||||| |||| ||||||| ||||| |||||    
T  10165628 ggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaagaacagttttttagagaatgataaactaatacgtatgattaatatactttta 10165529  T
Q  850 attttaa 856  Q
    |||||||    
T  10165528 attttaa 10165522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 13765860 - 13765911
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  13765860 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 13765911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 36567199 - 36567250
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  36567199 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 36567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 38294048 - 38293997
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  38294048 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 38293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 9e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 753 - 859
Target Start/End: Complemental strand, 38366242 - 38366133
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-ca-atttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||||||| | || ||||||||| |||||||||||| ||||||||||| |||||||||||    
T  38366242 ggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaaaaacagatttttagagaatgataaactaatacttatgattaatatattttta 38366143  T
Q  850 attttaaaaa 859  Q
    ||||||||||    
T  38366142 attttaaaaa 38366133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 32648870 - 32648976
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| |||||||||||    
T  32648870 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatattttta 32648969  T
Q  850 attttaa 856  Q
    |||||||    
T  32648970 attttaa 32648976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 859
Target Start/End: Complemental strand, 904412 - 904303
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaatt-ttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| ||| ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| ||||    
T  904412 ggttggaaatatatagaaaaat-ggacaaataattcacattttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatactttt 904314  T
Q  849 aattttaaaaa 859  Q
    |||||||||||    
T  904313 aattttaaaaa 904303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 17873411 - 17873305
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||||||||||||||||    ||||  ||| |||||||| ||||| |||||||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  17873411 ggttggaaatatatagaaaaatgcacaaaaaattcatatttttttaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 17873312  T
Q  850 attttaa 856  Q
    |||||||    
T  17873311 attttaa 17873305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 755 - 856
Target Start/End: Complemental strand, 24291598 - 24291494
Alignment:
Q  755 ttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaat 851  Q
    |||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||||    
T  24291598 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagctttttagagaatgataaactaatacttatgattaatatacttttaat 24291499  T
Q  852 tttaa 856  Q
    |||||    
T  24291498 tttaa 24291494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 753 - 859
Target Start/End: Original strand, 24682863 - 24682971
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaatttttagataatgataaact--atacttatgattgatatatttttaa 850  Q
    |||||||||||||  | ||||||| ||||  |||| |||||||| ||||  | |||||||||||||||||| |  || ||||||||| |||||||||| |    
T  24682863 ggttggaaatataagggaaaatagtaaaatctttcatatttttttaaagttattttttagataatgataaatttaatgcttatgattaatatatttttta 24682962  T
Q  851 ttttaaaaa 859  Q
    |||||||||    
T  24682963 ttttaaaaa 24682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 755 - 856
Target Start/End: Original strand, 38317096 - 38317200
Alignment:
Q  755 ttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaat 851  Q
    |||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||||    
T  38317096 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatacttttaat 38317195  T
Q  852 tttaa 856  Q
    |||||    
T  38317196 tttaa 38317200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 3126933 - 3126984
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  3126933 tttttagataatgataaactaatacttatgattaatatacttttaattttaa 3126984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 32060861 - 32060755
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    ||||||||||||||||||||||||  ||||  |||  ||||||||||| |  |  |||||||| ||||||||| | |||||||||||| ||||| |||||    
T  32060861 ggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaaaaacagttttttagagaatgataaattaatacttatgattaatatactttta 32060762  T
Q  850 attttaa 856  Q
    |||||||    
T  32060761 attttaa 32060755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 49404489 - 49404595
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||||||| |  |  |||||||| |||||||||||| ||||||||||| ||||| |||||    
T  49404489 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaacagttttttagagaatgataaactattacttatgattaatatactttta 49404588  T
Q  850 attttaa 856  Q
    |||||||    
T  49404589 attttaa 49404595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 41844650 - 41844544
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||| |||||||||||| |  ||||  |||  ||||||||||||| |||||||| ||| ||||||||| || ||||||||||| ||||| |||||    
T  41844650 ggttggaaacatatagaaaaatggacaaaaaattcacattttttgaaagaacaattttttagagaatgataaattaatacttatgattaatatactttta 41844551  T
Q  850 attttaa 856  Q
    |||||||    
T  41844550 attttaa 41844544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 790 - 856
Target Start/End: Complemental strand, 47669988 - 47669919
Alignment:
Q  790 attttttgaaagac--aatttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||||||||   |||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  47669988 attttttgaaagaataaatttttagagaatgataaactaatacttatgattaatatacttttaattttaa 47669919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 856
Target Start/End: Complemental strand, 16535904 - 16535800
Alignment:
Q  755 ttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga--caatttttagataatgataaact-atacttatgattgatatatttttaat 851  Q
    |||||||||||||||||||| |  ||||  |||  |||||||||||||   | |||||||| ||||||||||| |||||||| ||| |||| ||||||||    
T  16535904 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagagctattttttagagaatgataaactaatacttataattaatatctttttaat 16535805  T
Q  852 tttaa 856  Q
    |||||    
T  16535804 tttaa 16535800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 790 - 856
Target Start/End: Complemental strand, 23708314 - 23708245
Alignment:
Q  790 attttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  23708314 attttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatacttttaattttaa 23708245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 755 - 856
Target Start/End: Complemental strand, 24280124 - 24280020
Alignment:
Q  755 ttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaat 851  Q
    |||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| | ||||||||| ||||| |||||||    
T  24280124 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaattcttatgattaatatacttttaat 24280025  T
Q  852 tttaa 856  Q
    |||||    
T  24280024 tttaa 24280020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 806 - 853
Target Start/End: Original strand, 21730248 - 21730296
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattt 853  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  21730248 tttttagagaatgataaactaatacttatgattaatatatttttaattt 21730296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 7182112 - 7182163
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  7182112 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 7182163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 48830735 - 48830786
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  48830735 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 48830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 752 - 826
Target Start/End: Original strand, 21295983 - 21296059
Alignment:
Q  752 aggttggaaatatatagaaaaat--aggaaaaattttcctattttttgaaag-acaatttttagataatgataaacta 826  Q
    |||||||||||||||||||||||  |  ||||||||| | |||||||||||| ||| |||||||| ||||||||||||    
T  21295983 aggttggaaatatatagaaaaatggataaaaaattttac-attttttgaaagaacattttttagagaatgataaacta 21296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 859
Target Start/End: Original strand, 24662613 - 24662722
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaa-ctatacttatgattgatatattttta 849  Q
    |||||||||||||||| ||||| | ||||  ||||  ||||| |||||||  |  |||||||| ||||||||| | || ||||||||| |||| ||||||    
T  24662613 ggttggaaatatataggaaaatggtaaaatctttcacattttctgaaagagtaattttttagagaatgataaatcaatgcttatgattaatattttttta 24662712  T
Q  850 attttaaaaa 859  Q
    ||||||||||    
T  24662713 attttaaaaa 24662722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 754 - 856
Target Start/End: Original strand, 36151237 - 36151342
Alignment:
Q  754 gttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaa 850  Q
    |||| |||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| |||||  |||||    
T  36151237 gttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaatagttttttagaaaatgataaactaatacttatgattaatatacatttaa 36151336  T
Q  851 ttttaa 856  Q
    ||||||    
T  36151337 ttttaa 36151342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 37756589 - 37756695
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caatt-tttagataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||||||||| |||||| |  ||||  |||   |||||||||||| || || |||||| |||||||||||| ||||||||||| ||||| |||||    
T  37756589 ggttggaaatatatacaaaaatggacaaaaaattcaatttttttgaaagaacagttctttagagaatgataaactaatacttatgattaatatactttta 37756688  T
Q  850 attttaa 856  Q
    |||||||    
T  37756689 attttaa 37756695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 789 - 856
Target Start/End: Original strand, 52594528 - 52594598
Alignment:
Q  789 tattttttgaaaga-caattt-ttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||||||||| || ||| ||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  52594528 tattttttgaaagaacagtttcttagagaatgataaactaatacttatgattaatatacttttaattttaa 52594598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 753 - 842
Target Start/End: Complemental strand, 13270198 - 13270106
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatat 842  Q
    |||||||||||||||||||||| |  ||||  ||| |||||||| |||||  |  |||||||| ||||||||||| |||||||||||| ||||    
T  13270198 ggttggaaatatatagaaaaatggacaaaaaattcatatttttttaaagaacagttttttagagaatgataaactaatacttatgattaatat 13270106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 856
Target Start/End: Original strand, 41363684 - 41363784
Alignment:
Q  759 aaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaatttta 855  Q
    |||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||| | |||||||||||| ||||||||||| ||||| |||||||||||    
T  41363684 aaatatatagaaaaattgataaaaaattcacattttttgaaagaacagttttttacagaatgataaactaatacttatgattaatatacttttaatttta 41363783  T
Q  856 a 856  Q
    |    
T  41363784 a 41363784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 830 - 859
Target Start/End: Complemental strand, 47047438 - 47047409
Alignment:
Q  830 ttatgattgatatatttttaattttaaaaa 859  Q
    ||||||||||||||||||||||||||||||    
T  47047438 ttatgattgatatatttttaattttaaaaa 47047409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 11017816 - 11017710
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    ||||||||||||||||||||||||  ||||  |||  |||||||||||||  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  11017816 ggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttta 11017717  T
Q  850 attttaa 856  Q
    |||||||    
T  11017716 attttaa 11017710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 23871329 - 23871435
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||| |||  |||||||||||||  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  23871329 ggttggaaatatatagaaaaatggataaaatattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttta 23871428  T
Q  850 attttaa 856  Q
    |||||||    
T  23871429 attttaa 23871435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 753 - 859
Target Start/End: Complemental strand, 45565344 - 45565236
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  |||| ||| | |||||||||||||  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  45565344 ggttggaaatatatagaaaaatggacaaaaatttac-attttttgaaagaacagttttttagagaatgataaacttatacttatgattaatatactttta 45565246  T
Q  850 attttaaaaa 859  Q
    ||||||||||    
T  45565245 attttaaaaa 45565236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 12294027 - 12293921
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  |||| ||||  |||||||||||||  |  |||||||| ||||||||||| |||||||| ||| ||||| |||||    
T  12294027 ggttggaaatatatagaaaaatggacaaaaatttcacattttttgaaagaacagttttttagagaatgataaactaatacttattattaatatactttta 12293928  T
Q  850 attttaa 856  Q
    |||||||    
T  12293927 attttaa 12293921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 758 - 856
Target Start/End: Complemental strand, 50476738 - 50476637
Alignment:
Q  758 gaaatatatagaaaaataggaaaaat-tttcctattttttgaaaga-caattttta-gataatgataaacta-tacttatgattgatatatttttaattt 853  Q
    |||||||||||| |||| ||| |||| ||||  ||||||||||||| ||||||||| ||||||||||||||| | ||||| |||||||||||||||||||    
T  50476738 gaaatatatagagaaat-ggagaaatctttcacattttttgaaagagcaatttttaagataatgataaactaatgcttattattgatatatttttaattt 50476640  T
Q  854 taa 856  Q
    |||    
T  50476639 taa 50476637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 753 - 859
Target Start/End: Original strand, 1688083 - 1688192
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caat-ttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||||||||||||||||    ||||  |||  ||||||||||||| || | ||||||| |||||||||||| ||||||||||| ||||| |||||    
T  1688083 ggttggaaatatatagaaaaatgaacaaaaaattcacattttttgaaagaacagtcttttagagaatgataaactaatacttatgattaatatactttta 1688182  T
Q  850 attttaaaaa 859  Q
    ||||||||||    
T  1688183 attttaaaaa 1688192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 33991757 - 33991650
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| |  |||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| ||||    
T  33991757 ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttt 33991658  T
Q  849 aattttaa 856  Q
    ||||||||    
T  33991657 aattttaa 33991650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 752 - 856
Target Start/End: Original strand, 2925800 - 2925907
Alignment:
Q  752 aggttggaaatatatagaaaaataggaaaaattttcctattttttg-aaagacaa-tttttagataatgataaact-atacttatgattgatatattttt 848  Q
    ||||||||||||||||||||||| |  ||||  |||  |||||||| ||| |||| |||||||| ||||||||| | |||||||||||| ||||| ||||    
T  2925800 aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaacaattttttagaaaatgataaaataatacttatgattaatatactttt 2925899  T
Q  849 aattttaa 856  Q
    ||||||||    
T  2925900 aattttaa 2925907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 13255559 - 13255453
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| |  ||||| ||| | ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| ||||    
T  13255559 ggttggaaatatatagaaaaatggacaaaaaatttac-attttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttt 13255461  T
Q  849 aattttaa 856  Q
     |||||||    
T  13255460 gattttaa 13255453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 27500199 - 27500093
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||||||||||||||||   |||||  |||  |||||||||||||  |  |||||||  |||||||||||| ||||||||||| ||||| |||||    
T  27500199 ggttggaaatatatagaaaaatgacaaaaaaattcacattttttgaaagaacagttttttagtgaatgataaactaatacttatgattaatatactttta 27500100  T
Q  850 attttaa 856  Q
    |||||||    
T  27500099 attttaa 27500093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 859
Target Start/End: Complemental strand, 50247811 - 50247702
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaatt-ttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| ||| ||||  |||  ||||||| |||||  |  |||||||| |||||||||||| ||||||||||| ||||| ||||    
T  50247811 ggttggaaatatatagaaaaat-ggacaaataattcacattttttaaaagaatagttttttagagaatgataaactaatacttatgattaatatactttt 50247713  T
Q  849 aattttaaaaa 859  Q
    |||||||||||    
T  50247712 aattttaaaaa 50247702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 804 - 857
Target Start/End: Original strand, 9173668 - 9173722
Alignment:
Q  804 aatttttagataatgataaact-atacttatgattgatatatttttaattttaaa 857  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||| ||||||    
T  9173668 aatttttagataatgataaactaatgcttatgattaatatatttttaaatttaaa 9173722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 855
Target Start/End: Original strand, 39889524 - 39889629
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga--caatttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||     |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  39889524 ggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaacggttttttagagaatgataaactaatacttatgattaatatactttta 39889623  T
Q  850 atttta 855  Q
    ||||||    
T  39889624 atttta 39889629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 859
Target Start/End: Original strand, 42161919 - 42162028
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    ||||||||||||||| ||||||||  || |  |||  |||||||||||||  |  |||||||| ||||||||||| ||| |||||||| ||||| |||||    
T  42161919 ggttggaaatatataaaaaaatagacaataaattcacattttttgaaagaacagttttttagagaatgataaactaatatttatgattaatatactttta 42162018  T
Q  850 attttaaaaa 859  Q
    ||||||||||    
T  42162019 attttaaaaa 42162028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 806 - 859
Target Start/End: Complemental strand, 50402901 - 50402847
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaaaaa 859  Q
    ||||| || |||||||||||| ||||||||||| |||||||||||||||||||||    
T  50402901 ttttttgagaatgataaactaatacttatgattaatatatttttaattttaaaaa 50402847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 13061262 - 13061369
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa---tttttagataatgataaact-atacttatgattgatatattttt 848  Q
    ||||||||||||||||| |||| |  ||||  |||  |||||||||||||  |   |||||||| ||||||||||| |||||||||||| ||||| ||||    
T  13061262 ggttggaaatatatagagaaatggacaaaaaattcacattttttgaaagaacagtttttttagaaaatgataaactaatacttatgattaatatactttt 13061361  T
Q  849 aattttaa 856  Q
    ||||||||    
T  13061362 aattttaa 13061369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 753 - 854
Target Start/End: Complemental strand, 15464026 - 15463922
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga--caatttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||     |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  15464026 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacgtttttttagagaatgataaactaatacttatgattaatatactttta 15463927  T
Q  850 atttt 854  Q
    |||||    
T  15463926 atttt 15463922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 752 - 856
Target Start/End: Complemental strand, 32300271 - 32300164
Alignment:
Q  752 aggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttt 848  Q
    ||||||||||||| ||||||||| |  ||||  |||  ||||||| |||||  |  |||||||| ||||||||||| |||||||||||| ||||| ||||    
T  32300271 aggttggaaatatgtagaaaaatggacaaaaaattcacattttttaaaagaacagttttttagaaaatgataaactaatacttatgattaatatactttt 32300172  T
Q  849 aattttaa 856  Q
    ||||||||    
T  32300171 aattttaa 32300164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 779 - 856
Target Start/End: Original strand, 36668541 - 36668621
Alignment:
Q  779 aaaattttcctattttttgaaaga-caatttt-tagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||||  ||||||||||||| ||||||| | || |||||||||||| | ||||||||| ||||||||||||||||||    
T  36668541 aaaattttcacattttttgaaagaacaattttattgaaaatgataaactaatgcttatgattaatatatttttaattttaa 36668621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 1523810 - 1523704
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga--caatttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||| ||||||| |  ||||  |||  ||||||| |||||   |||||||| | ||||||||||| |||||||||||| ||||| |||||    
T  1523810 ggttggaaatatattgaaaaatggacaaaaaattcacatttttttaaagaacaaatttttaaagaatgataaactaatacttatgattaatatactttta 1523711  T
Q  850 attttaa 856  Q
    |||||||    
T  1523710 attttaa 1523704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 30543284 - 30543335
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| ||||||||| || ||||||||||| ||||||||||||||||||    
T  30543284 tttttagagaatgataaattaatacttatgattaatatatttttaattttaa 30543335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 32299262 - 32299211
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  32299262 tttttagaaaatgataaactaatacttatgattaatatacttttaattttaa 32299211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 47206290 - 47206396
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| ||| |||||| | ||||||||||| ||||| |||||    
T  47206290 ggttggaaatatatagaaaaattgataaaaaattcacattttttgaaagaacagctttttagagaattataaacaaatacttatgattaatatactttta 47206389  T
Q  850 attttaa 856  Q
    |||||||    
T  47206390 attttaa 47206396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 47905555 - 47905661
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||| |||||  |  |||||||| ||||||||||| ||||| |||||| ||||| |||||    
T  47905555 ggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaagaacagttttttagagaatgataaactaatactaatgattaatatactttta 47905654  T
Q  850 attttaa 856  Q
    |||||||    
T  47905655 attttaa 47905661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 896362 - 896467
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaag-aca-atttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| ||| |||  |||  |||||||||||| ||| ||||||| | |||| |||||| |||||||| ||| ||||| |||||    
T  896362 ggttggaaatatatagaaaaat-ggacaaaaattcacattttttgaaagaacagatttttaaagaatggtaaactaatacttataattaatatactttta 896460  T
Q  850 attttaa 856  Q
    |||||||    
T  896461 attttaa 896467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 806 - 859
Target Start/End: Complemental strand, 42806330 - 42806276
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaaaaa 859  Q
    |||||||| | ||||||| || |||||||||||||||||||||| ||||||||||    
T  42806330 tttttagagagtgataaattaatacttatgattgatatattttttattttaaaaa 42806276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 24735097 - 24734989
Alignment:
Q  753 ggttggaaatatatagaaaaatagg--aaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttt 847  Q
    |||||||||||||||||||||| |   ||||||||||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||    
T  24735097 ggttggaaatatatagaaaaatggacaaaaaattttcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatacttt 24734998  T
Q  848 taattttaa 856  Q
    |||||||||    
T  24734997 taattttaa 24734989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 26574261 - 26574367
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||| |||||||||  ||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  26574261 ggttggaaatatattgaaaaatagacaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 26574360  T
Q  850 attttaa 856  Q
    |||||||    
T  26574361 attttaa 26574367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 1029507 - 1029402
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaag-acaatttttagataatgataaact-atacttatgattgatatatttttaa 850  Q
    ||||||||||||||||||||||||  ||||  |||  ||||||| |||| ||||| |||||| ||||||||||| |||||| ||||| ||||| ||||||    
T  1029507 ggttggaaatatatagaaaaatagataaaaaattcacatttttttaaagaacaatatttagagaatgataaactaatacttgtgattaatatacttttaa 1029408  T
Q  851 ttttaa 856  Q
    ||||||    
T  1029407 ttttaa 1029402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 29241699 - 29241805
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-ca-atttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||| ||||||||| |  ||||  |||  ||||||||||||| || ||||||||| |||||||||||| ||||||||||| ||||| |||||    
T  29241699 ggttggaaatatgtagaaaaatggacaaaaaattcacattttttgaaagaacagatttttagagaatgataaactaatacttatgattaatatactttta 29241798  T
Q  850 attttaa 856  Q
    |||||||    
T  29241799 attttaa 29241805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 808 - 856
Target Start/End: Original strand, 9104869 - 9104917
Alignment:
Q  808 tttagataatgataaactatacttatgattgatatatttttaattttaa 856  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  9104869 tttagagaatgataaactatgcttatgattgatatttttttaattttaa 9104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 5825547 - 5825441
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||| |||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||    
T  5825547 ggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttta 5825448  T
Q  850 attttaa 856  Q
    |||||||    
T  5825447 attttaa 5825441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 26480997 - 26481103
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||||||| |  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  26480997 ggttggaaatatatagaaaaattgataaaaaattcacattttttgaaaaaacagttttttagagaatgataaactaatacttatgattaatatactttta 26481096  T
Q  850 attttaa 856  Q
    |||||||    
T  26481097 attttaa 26481103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 33212480 - 33212429
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  33212480 tttttagatagtgataaactaatacttatgattcatatatttttaattttaa 33212429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 759 - 856
Target Start/End: Complemental strand, 34914836 - 34914736
Alignment:
Q  759 aaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaatttta 855  Q
    |||||||||||||||| |  ||||  ||| |||||||||||| |  |  |||||||| |||||||||||| ||||||||||| ||||| |||||||||||    
T  34914836 aaatatatagaaaaatggacaaaaaattcatattttttgaaaaaacagttttttagagaatgataaactaatacttatgattaatatacttttaatttta 34914737  T
Q  856 a 856  Q
    |    
T  34914736 a 34914736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 4648853 - 4648959
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  4648853 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 4648952  T
Q  850 attttaa 856  Q
    |||||||    
T  4648953 attttaa 4648959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 17093112 - 17093006
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caa-tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||||||||| ||| |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  17093112 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaactttttagagaatgataaacttatacttatgattaatatactttta 17093013  T
Q  850 attttaa 856  Q
    |||||||    
T  17093012 attttaa 17093006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 1658392 - 1658286
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||| |||  |||||||||||||  |  |||||||| ||||||||||| |||||||| ||| ||||| |||||    
T  1658392 ggttggaaatatatagaaaaatggacaaaatattcacattttttgaaagaacagttttttagagaatgataaactaatacttataattaatatactttta 1658293  T
Q  850 attttaa 856  Q
    |||||||    
T  1658292 attttaa 1658286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 33718396 - 33718290
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  ||||||| |||||  |  |||||||| ||||||||||| |||||||||||| |||||||||||    
T  33718396 ggttggaaatatatagaaaaatggacaaaaaattcaaattttttaaaagaacagttttttagagaatgataaactaatacttatgattaatatattttta 33718297  T
Q  850 attttaa 856  Q
    |||||||    
T  33718296 attttaa 33718290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 26149819 - 26149712
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| |  |||||  |||  |||||||||||||  |  |||||||| |||||||||||| || |||||||||||||| ||||    
T  26149819 ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagattagttttttagagaatgataaactaatatttatgattgatatactttt 26149720  T
Q  849 aattttaa 856  Q
    ||||||||    
T  26149719 aattttaa 26149712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 25027137 - 25027031
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga--caatttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||   | |||||||| ||||||||||| |||||||| ||| ||||| |||||    
T  25027137 ggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaataattttttagagaatgataaactaatacttatcattaatatactttta 25027038  T
Q  850 attttaa 856  Q
    |||||||    
T  25027037 attttaa 25027031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 35701618 - 35701512
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| ||||||||||| |||||||||||| ||||| ||| |    
T  35701618 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttaa 35701519  T
Q  850 attttaa 856  Q
    |||||||    
T  35701518 attttaa 35701512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 757 - 856
Target Start/End: Complemental strand, 35869041 - 35868939
Alignment:
Q  757 ggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatatttttaattt 853  Q
    |||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||||||    
T  35869041 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatacttttaattt 35868942  T
Q  854 taa 856  Q
    |||    
T  35868941 taa 35868939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 859
Target Start/End: Original strand, 25598635 - 25598744
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||| |||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||| ||| ||||||||||| ||||| |||||    
T  25598635 ggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataagctaatacttatgattaatatactttta 25598734  T
Q  850 attttaaaaa 859  Q
    ||||||||||    
T  25598735 attttaaaaa 25598744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 32760916 - 32760865
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  32760916 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 32760865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 38302279 - 38302330
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  38302279 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 38302330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 806 - 859
Target Start/End: Original strand, 19389749 - 19389803
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaaaaa 859  Q
    |||||||| ||||||||| || | ||||||||| |||||||||||||||||||||    
T  19389749 tttttagagaatgataaattaatgcttatgattaatatatttttaattttaaaaa 19389803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 1794 - 1687
Alignment:
Q  753 ggttggaaatatatagaaaaatagga--aaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatatttt 847  Q
    ||||||||||||||||||||| ||||  ||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| |||||||||    
T  1794 ggttggaaatatatagaaaaa-aggacaaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatatttt 1696  T
Q  848 taattttaa 856  Q
    |||||||||    
T  1695 taattttaa 1687  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 3404439 - 3404546
Alignment:
Q  753 ggttggaaatatatagaaaaatag-gaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttt 848  Q
    ||||||||||||||||||||||||  |||||  |||  |||||||||||||  |  |||||||| ||||||||||| |||||||||||| ||||| ||||    
T  3404439 ggttggaaatatatagaaaaatagataaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttt 3404538  T
Q  849 aattttaa 856  Q
    ||||||||    
T  3404539 aattttaa 3404546  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 34272730 - 34272624
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| || ||||  |||  ||||||||||| |  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  34272730 ggttggaaatatatagaaaaatgggcaaaaaattcaaattttttgaaaaaacagttttttagaaaatgataaactaatacttatgattaatatactttta 34272631  T
Q  850 attttaa 856  Q
    |||||||    
T  34272630 attttaa 34272624  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 37659397 - 37659503
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaact-atacttatgattgatatattttta 849  Q
    ||||||||||||||||||||||||| ||||  |||  | ||||||||| |  |  |||||||| ||||||||||| |||||||||||| ||||| |||||    
T  37659397 ggttggaaatatatagaaaaataggcaaaaagttcacaatttttgaaataacagttttttagagaatgataaactaatacttatgattaatatactttta 37659496  T
Q  850 attttaa 856  Q
    |||||||    
T  37659497 attttaa 37659503  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 4734362 - 4734468
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||||||| |||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||    
T  4734362 ggttggaaatatagagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttta 4734461  T
Q  850 attttaa 856  Q
    |||||||    
T  4734462 attttaa 4734468  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 25033540 - 25033489
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  25033540 tttttagataatgataaactaatacttatgattaatatacttttaattttaa 25033489  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 34148501 - 34148551
Alignment:
Q  806 tttttagataatgataaactatacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| |||||||||| ||||| ||||||||||||    
T  34148501 tttttagagaatgataaactaaacttatgattaatatacttttaattttaa 34148551  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 2474688 - 2474739
Alignment:
Q  806 tttttagataatgataaact-atacttatgattgatatatttttaattttaa 856  Q
    |||||||||||||||||||| ||||||||| || ||||| ||||||||||||    
T  2474688 tttttagataatgataaactaatacttatggttaatatacttttaattttaa 2474739  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 33230968 - 33231019
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  33230968 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 33231019  T

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Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Complemental strand, 34349875 - 34349824
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  34349875 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 34349824  T

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Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 36102811 - 36102862
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  36102811 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 36102862  T

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Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 826 - 859
Target Start/End: Complemental strand, 4137845 - 4137812
Alignment:
Q  826 atacttatgattgatatatttttaattttaaaaa 859  Q
    |||||||||||| |||||||||||||||||||||    
T  4137845 atacttatgattaatatatttttaattttaaaaa 4137812  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 856
Target Start/End: Complemental strand, 29612149 - 29612100
Alignment:
Q  808 tttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||| ||||||||| || ||||||||||| ||||||||||||||||||    
T  29612149 tttagacaatgataaattaatacttatgattaatatatttttaattttaa 29612100  T

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Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 784 - 856
Target Start/End: Original strand, 40984973 - 40985046
Alignment:
Q  784 tttcctattttttgaaagacaatttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||| |||||||||||||  | |||||||| ||||||||| || |  |||||||| ||||||||||||||||||    
T  40984973 tttcatattttttgaaagtaattttttagagaatgataaattaatgtttatgattaatatatttttaattttaa 40985046  T

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Target: scaffold1562 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 356 - 249
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| |  |||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| ||||    
T  356 ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttt 257  T
Q  849 aattttaa 856  Q
    ||||||||    
T  256 aattttaa 249  T

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Target: scaffold1158 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 2237 - 2344
Alignment:
Q  753 ggttggaaatatatagaaaaatagg-aaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttt 848  Q
    |||||||||||||||||||||| |  |||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| ||||    
T  2237 ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttt 2336  T
Q  849 aattttaa 856  Q
    ||||||||    
T  2337 aattttaa 2344  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 753 - 856
Target Start/End: Original strand, 35321 - 35427
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaagacaa--tttttagataatgataaacta-tacttatgattgatatattttta 849  Q
    |||||||||||||||||||||| |  ||||  |||  |||||||||||||  |  |||||||| |||||||||||| ||||||||||| ||||| |||||    
T  35321 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatactttta 35420  T
Q  850 attttaa 856  Q
    |||||||    
T  35421 attttaa 35427  T

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Target: scaffold0636 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 753 - 856
Target Start/End: Complemental strand, 8606 - 8500
Alignment:
Q  753 ggttggaaatatatagaaaaataggaaaaattttcctattttttgaaaga-caattttt-agataatgataaacta-tacttatgattgatatattttta 849  Q
    ||||||||||||||| |||||| |  ||||  |||  ||||||||||||| |||||||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  8606 ggttggaaatatatacaaaaatggacaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 8507  T
Q  850 attttaa 856  Q
    |||||||    
T  8506 attttaa 8500  T

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Target: scaffold0952 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 856
Target Start/End: Original strand, 3591 - 3642
Alignment:
Q  806 tttttagataatgataaacta-tacttatgattgatatatttttaattttaa 856  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  3591 tttttagagaatgataaactaatacttatgattaatatacttttaattttaa 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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