View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5016_low_2 (Length: 406)
Name: NF5016_low_2
Description: NF5016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5016_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 8093496 - 8093662
Alignment:
| Q |
18 |
ttgatgaggttaatgatggtacaaaatcgtttgacgacaaattgagaatatactatattggtcaacaccttttgtacattcaaagggccataaggtaact |
117 |
Q |
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| T |
8093496 |
ttgatgaggttaatgatggtacaaaatcgtttgatgacaaattgagaatatactatattggtcaacaccttttgtacattcaaagggccataaggtaact |
8093595 |
T |
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| Q |
118 |
tatttcaaaaaacaaacacatacggaaaatatattatactatgattaaatatattatatttttggga |
184 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
8093596 |
tatttcaaaaaacaaacacatacgaaaaatatattatactatgattaaatatattatatttttggga |
8093662 |
T |
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