View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5017-Insertion-12 (Length: 269)
Name: NF5017-Insertion-12
Description: NF5017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5017-Insertion-12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 37672270 - 37672005
Alignment:
| Q |
7 |
agatcttgtatcttgattcttaccttccaggaaatacaccctttggta---tgtagtatttgacttttcatacaatcagtgcttttgaatttgtggcatg |
103 |
Q |
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| T |
37672270 |
agatcttgtatcttgattcttaccttccaggaaatacaccctttggtacaatgtagtatttgacttttcatacaatcaatgcttttgaatttgtggcatg |
37672171 |
T |
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| Q |
104 |
aaataatagtcgtcacttgtcatcctccacctttgactgtgcgacaacctttattttttgttcttgtattgtttgactagtcatatacacttgtgtatga |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37672170 |
aaataatagtcgtcacttgtcatcctccacctttgactgtgcgacgacatttattttttgttcttgtattgtttgactagtcatatacacttgtgtatga |
37672071 |
T |
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| Q |
204 |
atgccatccacattatcctctaaagaaaaggttcatatagcaatctaccaatatgaaaaacgacag |
269 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
37672070 |
atgccatccacattatcctctaaagaaaaagttcatatagcaatctaccaatatgaaaaacgacag |
37672005 |
T |
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