View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5018_high_12 (Length: 337)

Name: NF5018_high_12
Description: NF5018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5018_high_12
NF5018_high_12
[»] chr2 (9 HSPs)
chr2 (11-206)||(31590579-31590774)
chr2 (204-333)||(31582093-31582222)
chr2 (207-240)||(13100292-13100325)
chr2 (207-247)||(18789408-18789448)
chr2 (207-246)||(10723933-10723972)
chr2 (207-241)||(29599938-29599972)
chr2 (207-247)||(2256964-2257004)
chr2 (207-251)||(22558966-22559010)
chr2 (206-238)||(40661782-40661814)
[»] chr8 (4 HSPs)
chr8 (207-247)||(37999448-37999488)
chr8 (207-247)||(13357469-13357509)
chr8 (198-246)||(18147450-18147498)
chr8 (207-251)||(34420890-34420934)
[»] chr5 (4 HSPs)
chr5 (198-246)||(8543570-8543618)
chr5 (207-246)||(2839792-2839831)
chr5 (207-245)||(20258540-20258578)
chr5 (207-241)||(31545870-31545904)
[»] scaffold0027 (1 HSPs)
scaffold0027 (207-246)||(61598-61637)
[»] chr7 (10 HSPs)
chr7 (207-246)||(10025988-10026027)
chr7 (207-246)||(19626553-19626592)
chr7 (207-246)||(34448638-34448677)
chr7 (207-241)||(21164786-21164820)
chr7 (207-249)||(21993173-21993215)
chr7 (207-249)||(47342462-47342504)
chr7 (207-243)||(21322172-21322208)
chr7 (210-246)||(29053037-29053073)
chr7 (211-247)||(38025151-38025187)
chr7 (207-247)||(40808187-40808227)
[»] chr4 (3 HSPs)
chr4 (207-246)||(14202507-14202546)
chr4 (207-246)||(30780123-30780162)
chr4 (207-240)||(30848010-30848043)
[»] chr3 (4 HSPs)
chr3 (207-246)||(21628916-21628955)
chr3 (205-240)||(38602771-38602806)
chr3 (208-246)||(42372514-42372552)
chr3 (207-239)||(31272684-31272716)
[»] chr1 (5 HSPs)
chr1 (207-246)||(41769843-41769882)
chr1 (207-246)||(47719135-47719174)
chr1 (207-241)||(4295233-4295267)
chr1 (207-239)||(22346677-22346709)
chr1 (207-247)||(42888568-42888608)
[»] scaffold0015 (1 HSPs)
scaffold0015 (207-241)||(75182-75216)
[»] scaffold0735 (1 HSPs)
scaffold0735 (207-247)||(1521-1561)


Alignment Details
Target: chr2 (Bit Score: 99; Significance: 8e-49; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 31590774 - 31590579
Alignment:
Q  11 cccacattgaagagcccatatgannnnnnnatcttcatatcgaggagcgcttcttcacctccaatcaacacctcgatttctggctcaccatggttcacca 110  Q
    |||||||||||||  ||||||||       |||||||||| || |||||||||| || |||||||||||||||||||| | || ||||||||| ||| ||    
T  31590774 cccacattgaagaagccatatgagccacccatcttcatattgatgagcgcttctccagctccaatcaacacctcgattcccgggtcaccatggctcaaca 31590675  T
Q  111 gcggcgggataatcaaaaccggtttccaaaaacccgccatgaatctctgaaagcctatctcactgaactcatcaaacaaatacatcattcatcttc 206  Q
    ||||| |||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  31590674 gcggctggataatcaagaccaggttcaagaaacccgccatgaatctctgaaagcctatctcactgaactcatcaaacaaatccatccttcatcttc 31590579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 31582222 - 31582093
Alignment:
Q  204 ttctatgcattatccaaaccaactgagttaagctcacgtggactattatttatactcttaatacaatgtggtacattttcaactatcaatacattnnnnn 303  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  31582222 ttctatgcattgttcaaaccaactgagctaagctcacgtggactattatttatactcttaatacaatgtggtacattttcaactatcaatacattaaaaa 31582123  T
Q  304 nntagttctccactttcctattttgttcat 333  Q
      ||||||||||||||||||||||||||||    
T  31582122 aatagttctccactttcctattttgttcat 31582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 13100292 - 13100325
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcac 240  Q
    ||||||||||||||||||||||||||||||||||    
T  13100292 tatgcattatccaaaccaactgagttaagctcac 13100325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 18789448 - 18789408
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggact 247  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  18789448 tatgcattgtccaaaccaactgagttaagctcacgaggact 18789408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 10723972 - 10723933
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  10723972 tatgcattacccaaaccaactgagttaagctcacgaggac 10723933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 29599972 - 29599938
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacg 241  Q
    |||||||||||||||||||||||| ||||||||||    
T  29599972 tatgcattatccaaaccaactgagctaagctcacg 29599938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 2257004 - 2256964
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggact 247  Q
    |||||||| |||| ||||||||||||||||||||| |||||    
T  2257004 tatgcattgtccataccaactgagttaagctcacgaggact 2256964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 22559010 - 22558966
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggactatta 251  Q
    |||||||| ||||||||||||||||||| |||||| |||| ||||    
T  22559010 tatgcattgtccaaaccaactgagttaaactcacgaggaccatta 22558966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 40661814 - 40661782
Alignment:
Q  206 ctatgcattatccaaaccaactgagttaagctc 238  Q
    ||||||||||| |||||||||||||||||||||    
T  40661814 ctatgcattattcaaaccaactgagttaagctc 40661782  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 37999448 - 37999488
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggact 247  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  37999448 tatgcattatccataccaactgagttaagctcacgaggact 37999488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 13357469 - 13357509
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggact 247  Q
    |||||||| |||| ||||||||||||||||||||| |||||    
T  13357469 tatgcattgtccataccaactgagttaagctcacgaggact 13357509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 18147498 - 18147450
Alignment:
Q  198 ttcatcttctatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||| || |||||||| |||||||||| |||| |||||||||||||||    
T  18147498 ttcatattttatgcattgtccaaaccaattgagctaagctcacgtggac 18147450  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 34420890 - 34420934
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggactatta 251  Q
    |||||||| |||| ||||| |||||||||||||||||||| ||||    
T  34420890 tatgcattgtccataccaattgagttaagctcacgtggacgatta 34420934  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 8543618 - 8543570
Alignment:
Q  198 ttcatcttctatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||| || |||||||| |||||||||||||||||||||||||| ||||    
T  8543618 ttcatattttatgcattgtccaaaccaactgagttaagctcacgaggac 8543570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 2839831 - 2839792
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  2839831 tatgcattatccaaaccaactgagctaagctcacgaggac 2839792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 20258578 - 20258540
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtgga 245  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  20258578 tatgcattatccataccaactgagttaacctcacgtgga 20258540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 31545904 - 31545870
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacg 241  Q
    |||||||||||| ||||||||||||||||||||||    
T  31545904 tatgcattatcctaaccaactgagttaagctcacg 31545870  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 61598 - 61637
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  61598 tatgcattatccttaccaactgagttaagctcacgtggac 61637  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000007; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 10026027 - 10025988
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  10026027 tatgcattgtccaaaccaactgagttaagctcacgaggac 10025988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 19626553 - 19626592
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  19626553 tatgcattgtccaaaccaactgagttaagctcacgaggac 19626592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 34448638 - 34448677
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  34448638 tatgcattgtccaaaccaactgagttaagctcacgaggac 34448677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Original strand, 21164786 - 21164820
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacg 241  Q
    ||||||||||||| |||||||||||||||||||||    
T  21164786 tatgcattatccataccaactgagttaagctcacg 21164820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 21993215 - 21993173
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggactat 249  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  21993215 tatgcattgtccataccaactgagttaagctcacgaggactat 21993173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 47342462 - 47342504
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggactat 249  Q
    |||||||| |||||||||||||||||||||||| | |||||||    
T  47342462 tatgcattgtccaaaccaactgagttaagctcatgaggactat 47342504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 21322208 - 21322172
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtg 243  Q
    ||||||||||||  |||||||||||||||||||||||    
T  21322208 tatgcattatccttaccaactgagttaagctcacgtg 21322172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 29053073 - 29053037
Alignment:
Q  210 gcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  29053073 gcattatccaaaccaactgagctaagctcacggggac 29053037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 38025151 - 38025187
Alignment:
Q  211 cattatccaaaccaactgagttaagctcacgtggact 247  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  38025151 cattatccataccaactgagttaagctcacgaggact 38025187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 40808187 - 40808227
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggact 247  Q
    |||||| | |||||||||||||||||||||||||| |||||    
T  40808187 tatgcactgtccaaaccaactgagttaagctcacgaggact 40808227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 14202507 - 14202546
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  14202507 tatgcattatccaaatcaactgagttaagctcacgaggac 14202546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 30780162 - 30780123
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  30780162 tatgcattgtccataccaactgagttaagctcacgtggac 30780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 30848010 - 30848043
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcac 240  Q
    |||||||| |||||||||||||||||||||||||    
T  30848010 tatgcattgtccaaaccaactgagttaagctcac 30848043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 21628916 - 21628955
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  21628916 tatgcattatccaaaccaactgagctaagctcacgaggac 21628955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 240
Target Start/End: Complemental strand, 38602806 - 38602771
Alignment:
Q  205 tctatgcattatccaaaccaactgagttaagctcac 240  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38602806 tctatgcattatccataccaactgagttaagctcac 38602771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 42372552 - 42372514
Alignment:
Q  208 atgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  42372552 atgcattatccaaaccaaccgagttaagctcacgaggac 42372514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 31272716 - 31272684
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctca 239  Q
    ||||||||||||| |||||||||||||||||||    
T  31272716 tatgcattatccataccaactgagttaagctca 31272684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 41769843 - 41769882
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  41769843 tatgcattatccaaaccaactgagctaagctcacgaggac 41769882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 47719135 - 47719174
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggac 246  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  47719135 tatgcattatccttaccaactgagttaagctcacgtggac 47719174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 4295267 - 4295233
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacg 241  Q
    |||||||||||||||||||||||| ||||||||||    
T  4295267 tatgcattatccaaaccaactgagctaagctcacg 4295233  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 22346709 - 22346677
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctca 239  Q
    |||||||||||||||||||||||| ||||||||    
T  22346709 tatgcattatccaaaccaactgagctaagctca 22346677  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 42888608 - 42888568
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggact 247  Q
    |||||||| |||| |||||||||| ||||||||||||||||    
T  42888608 tatgcattgtccataccaactgagctaagctcacgtggact 42888568  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 75216 - 75182
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacg 241  Q
    ||||||||||||| |||||||||||||||||||||    
T  75216 tatgcattatccataccaactgagttaagctcacg 75182  T

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Target: scaffold0735 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 1561 - 1521
Alignment:
Q  207 tatgcattatccaaaccaactgagttaagctcacgtggact 247  Q
    |||||||| |||| |||||||||| ||||||||||||||||    
T  1561 tatgcattgtccataccaactgagctaagctcacgtggact 1521  T

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