View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5018_low_13 (Length: 337)
Name: NF5018_low_13
Description: NF5018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5018_low_13 |
 |  |
|
| [»] scaffold0027 (1 HSPs) |
 |  |  |
|
| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
| [»] scaffold0735 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 99; Significance: 8e-49; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 31590774 - 31590579
Alignment:
| Q |
11 |
cccacattgaagagcccatatgannnnnnnatcttcatatcgaggagcgcttcttcacctccaatcaacacctcgatttctggctcaccatggttcacca |
110 |
Q |
| |
|
||||||||||||| |||||||| |||||||||| || |||||||||| || |||||||||||||||||||| | || ||||||||| ||| || |
|
|
| T |
31590774 |
cccacattgaagaagccatatgagccacccatcttcatattgatgagcgcttctccagctccaatcaacacctcgattcccgggtcaccatggctcaaca |
31590675 |
T |
 |
| Q |
111 |
gcggcgggataatcaaaaccggtttccaaaaacccgccatgaatctctgaaagcctatctcactgaactcatcaaacaaatacatcattcatcttc |
206 |
Q |
| |
|
||||| |||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
31590674 |
gcggctggataatcaagaccaggttcaagaaacccgccatgaatctctgaaagcctatctcactgaactcatcaaacaaatccatccttcatcttc |
31590579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 31582222 - 31582093
Alignment:
| Q |
204 |
ttctatgcattatccaaaccaactgagttaagctcacgtggactattatttatactcttaatacaatgtggtacattttcaactatcaatacattnnnnn |
303 |
Q |
| |
|
||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31582222 |
ttctatgcattgttcaaaccaactgagctaagctcacgtggactattatttatactcttaatacaatgtggtacattttcaactatcaatacattaaaaa |
31582123 |
T |
 |
| Q |
304 |
nntagttctccactttcctattttgttcat |
333 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
31582122 |
aatagttctccactttcctattttgttcat |
31582093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 13100292 - 13100325
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
13100292 |
tatgcattatccaaaccaactgagttaagctcac |
13100325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 18789448 - 18789408
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
18789448 |
tatgcattgtccaaaccaactgagttaagctcacgaggact |
18789408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 10723972 - 10723933
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
10723972 |
tatgcattacccaaaccaactgagttaagctcacgaggac |
10723933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 29599972 - 29599938
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacg |
241 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |
|
|
| T |
29599972 |
tatgcattatccaaaccaactgagctaagctcacg |
29599938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 2257004 - 2256964
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| ||||| |
|
|
| T |
2257004 |
tatgcattgtccataccaactgagttaagctcacgaggact |
2256964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 22559010 - 22558966
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggactatta |
251 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||| |||| |||| |
|
|
| T |
22559010 |
tatgcattgtccaaaccaactgagttaaactcacgaggaccatta |
22558966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 40661814 - 40661782
Alignment:
| Q |
206 |
ctatgcattatccaaaccaactgagttaagctc |
238 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
40661814 |
ctatgcattattcaaaccaactgagttaagctc |
40661782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 37999448 - 37999488
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
37999448 |
tatgcattatccataccaactgagttaagctcacgaggact |
37999488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 13357469 - 13357509
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| ||||| |
|
|
| T |
13357469 |
tatgcattgtccataccaactgagttaagctcacgaggact |
13357509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 18147498 - 18147450
Alignment:
| Q |
198 |
ttcatcttctatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
||||| || |||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
18147498 |
ttcatattttatgcattgtccaaaccaattgagctaagctcacgtggac |
18147450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 34420890 - 34420934
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggactatta |
251 |
Q |
| |
|
|||||||| |||| ||||| |||||||||||||||||||| |||| |
|
|
| T |
34420890 |
tatgcattgtccataccaattgagttaagctcacgtggacgatta |
34420934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 8543618 - 8543570
Alignment:
| Q |
198 |
ttcatcttctatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
||||| || |||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
8543618 |
ttcatattttatgcattgtccaaaccaactgagttaagctcacgaggac |
8543570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 2839831 - 2839792
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
2839831 |
tatgcattatccaaaccaactgagctaagctcacgaggac |
2839792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 20258578 - 20258540
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtgga |
245 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
20258578 |
tatgcattatccataccaactgagttaacctcacgtgga |
20258540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 31545904 - 31545870
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacg |
241 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
31545904 |
tatgcattatcctaaccaactgagttaagctcacg |
31545870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 61598 - 61637
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
61598 |
tatgcattatccttaccaactgagttaagctcacgtggac |
61637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.000000007; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 10026027 - 10025988
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
10026027 |
tatgcattgtccaaaccaactgagttaagctcacgaggac |
10025988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 19626553 - 19626592
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
19626553 |
tatgcattgtccaaaccaactgagttaagctcacgaggac |
19626592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 34448638 - 34448677
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
34448638 |
tatgcattgtccaaaccaactgagttaagctcacgaggac |
34448677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Original strand, 21164786 - 21164820
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacg |
241 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21164786 |
tatgcattatccataccaactgagttaagctcacg |
21164820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 21993215 - 21993173
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggactat |
249 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| ||||||| |
|
|
| T |
21993215 |
tatgcattgtccataccaactgagttaagctcacgaggactat |
21993173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Original strand, 47342462 - 47342504
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggactat |
249 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| | ||||||| |
|
|
| T |
47342462 |
tatgcattgtccaaaccaactgagttaagctcatgaggactat |
47342504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 21322208 - 21322172
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtg |
243 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21322208 |
tatgcattatccttaccaactgagttaagctcacgtg |
21322172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 29053073 - 29053037
Alignment:
| Q |
210 |
gcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
29053073 |
gcattatccaaaccaactgagctaagctcacggggac |
29053037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 38025151 - 38025187
Alignment:
| Q |
211 |
cattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
38025151 |
cattatccataccaactgagttaagctcacgaggact |
38025187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 40808187 - 40808227
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||| ||||| |
|
|
| T |
40808187 |
tatgcactgtccaaaccaactgagttaagctcacgaggact |
40808227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 14202507 - 14202546
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
14202507 |
tatgcattatccaaatcaactgagttaagctcacgaggac |
14202546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 30780162 - 30780123
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
30780162 |
tatgcattgtccataccaactgagttaagctcacgtggac |
30780123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 30848010 - 30848043
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcac |
240 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
30848010 |
tatgcattgtccaaaccaactgagttaagctcac |
30848043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 21628916 - 21628955
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
21628916 |
tatgcattatccaaaccaactgagctaagctcacgaggac |
21628955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 240
Target Start/End: Complemental strand, 38602806 - 38602771
Alignment:
| Q |
205 |
tctatgcattatccaaaccaactgagttaagctcac |
240 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |
|
|
| T |
38602806 |
tctatgcattatccataccaactgagttaagctcac |
38602771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 42372552 - 42372514
Alignment:
| Q |
208 |
atgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
42372552 |
atgcattatccaaaccaaccgagttaagctcacgaggac |
42372514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 31272716 - 31272684
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctca |
239 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
31272716 |
tatgcattatccataccaactgagttaagctca |
31272684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 41769843 - 41769882
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
41769843 |
tatgcattatccaaaccaactgagctaagctcacgaggac |
41769882 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 47719135 - 47719174
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggac |
246 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
47719135 |
tatgcattatccttaccaactgagttaagctcacgtggac |
47719174 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 4295267 - 4295233
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacg |
241 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |
|
|
| T |
4295267 |
tatgcattatccaaaccaactgagctaagctcacg |
4295233 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 22346709 - 22346677
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctca |
239 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
22346709 |
tatgcattatccaaaccaactgagctaagctca |
22346677 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 42888608 - 42888568
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
|||||||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
42888608 |
tatgcattgtccataccaactgagctaagctcacgtggact |
42888568 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 75216 - 75182
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacg |
241 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
75216 |
tatgcattatccataccaactgagttaagctcacg |
75182 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0735 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0735
Description:
Target: scaffold0735; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 1561 - 1521
Alignment:
| Q |
207 |
tatgcattatccaaaccaactgagttaagctcacgtggact |
247 |
Q |
| |
|
|||||||| |||| |||||||||| |||||||||||||||| |
|
|
| T |
1561 |
tatgcattgtccataccaactgagctaagctcacgtggact |
1521 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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