View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5019_high_1 (Length: 1040)

Name: NF5019_high_1
Description: NF5019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5019_high_1
NF5019_high_1
[»] chr6 (17 HSPs)
chr6 (18-1003)||(34786264-34787254)
chr6 (773-849)||(13227127-13227199)
chr6 (117-167)||(34787239-34787289)
chr6 (761-818)||(6776603-6776660)
chr6 (761-818)||(33549127-33549184)
chr6 (761-818)||(12188299-12188356)
chr6 (761-818)||(12234503-12234560)
chr6 (761-853)||(6758387-6758475)
chr6 (761-816)||(21418493-21418548)
chr6 (761-815)||(30127423-30127477)
chr6 (761-817)||(12216767-12216823)
chr6 (761-817)||(32613137-32613193)
chr6 (761-816)||(24641188-24641243)
chr6 (761-804)||(31623001-31623044)
chr6 (761-818)||(3715475-3715532)
chr6 (761-814)||(10338174-10338227)
chr6 (761-818)||(32201881-32201938)
[»] chr2 (24 HSPs)
chr2 (70-192)||(24127945-24128068)
chr2 (71-182)||(40606877-40606989)
chr2 (707-760)||(6537429-6537482)
chr2 (761-817)||(26545863-26545919)
chr2 (769-818)||(25637182-25637231)
chr2 (270-318)||(24128153-24128201)
chr2 (761-817)||(42327392-42327448)
chr2 (670-705)||(24128521-24128556)
chr2 (761-816)||(39715015-39715070)
chr2 (761-811)||(37755974-37756024)
chr2 (761-818)||(42602577-42602634)
chr2 (762-818)||(4262298-4262354)
chr2 (761-813)||(28846714-28846766)
chr2 (762-814)||(42860372-42860424)
chr2 (761-816)||(19016054-19016109)
chr2 (761-816)||(21213792-21213847)
chr2 (445-500)||(24128285-24128340)
chr2 (761-816)||(29503294-29503349)
chr2 (761-816)||(37480098-37480153)
chr2 (761-818)||(42922437-42922495)
chr2 (761-818)||(7799031-7799088)
chr2 (761-814)||(12994376-12994429)
chr2 (761-818)||(16918574-16918631)
chr2 (767-816)||(40791488-40791537)
[»] chr3 (39 HSPs)
chr3 (72-180)||(33573585-33573693)
chr3 (72-180)||(33461231-33461340)
chr3 (761-818)||(4222164-4222221)
chr3 (761-818)||(51903874-51903931)
chr3 (763-818)||(10445135-10445190)
chr3 (761-818)||(2667885-2667942)
chr3 (761-818)||(4844507-4844564)
chr3 (761-818)||(4870203-4870260)
chr3 (761-818)||(29563923-29563980)
chr3 (761-818)||(36720404-36720461)
chr3 (765-818)||(44743851-44743904)
chr3 (761-817)||(30311329-30311385)
chr3 (70-180)||(11433673-11433784)
chr3 (761-816)||(14339633-14339688)
chr3 (761-820)||(21960574-21960633)
chr3 (763-818)||(31520601-31520656)
chr3 (759-818)||(40063640-40063699)
chr3 (761-816)||(47454615-47454670)
chr3 (758-812)||(9557340-9557394)
chr3 (761-818)||(10499105-10499162)
chr3 (765-818)||(30510195-30510248)
chr3 (777-818)||(36010781-36010822)
chr3 (761-818)||(46518651-46518708)
chr3 (761-818)||(47860779-47860835)
chr3 (762-818)||(27259185-27259241)
chr3 (762-818)||(28703400-28703456)
chr3 (762-797)||(31788987-31789022)
chr3 (107-182)||(32319339-32319417)
chr3 (764-818)||(31608520-31608574)
chr3 (768-818)||(39253727-39253777)
chr3 (771-817)||(52769980-52770026)
chr3 (761-814)||(8051237-8051290)
chr3 (762-815)||(11090164-11090217)
chr3 (761-818)||(15048057-15048114)
chr3 (762-815)||(26411569-26411622)
chr3 (761-802)||(28531070-28531111)
chr3 (761-818)||(32651434-32651491)
chr3 (769-818)||(37051290-37051339)
chr3 (769-818)||(47824146-47824195)
[»] scaffold1367 (1 HSPs)
scaffold1367 (761-818)||(836-893)
[»] scaffold0299 (1 HSPs)
scaffold0299 (761-818)||(11551-11608)
[»] chr4 (36 HSPs)
chr4 (761-826)||(13015450-13015515)
chr4 (765-816)||(39509097-39509148)
chr4 (765-818)||(2185028-2185081)
chr4 (761-818)||(7292794-7292851)
chr4 (761-818)||(37109347-37109404)
chr4 (761-814)||(38869791-38869844)
chr4 (766-818)||(8306513-8306565)
chr4 (762-818)||(23377980-23378036)
chr4 (770-818)||(40813314-40813362)
chr4 (68-160)||(44253881-44253973)
chr4 (763-818)||(2622391-2622446)
chr4 (761-853)||(7949419-7949507)
chr4 (761-816)||(30938217-30938272)
chr4 (761-816)||(55427198-55427253)
chr4 (761-815)||(41346962-41347016)
chr4 (761-818)||(21660140-21660197)
chr4 (761-818)||(21668904-21668961)
chr4 (761-814)||(51250522-51250575)
chr4 (764-816)||(32992638-32992690)
chr4 (761-816)||(19238575-19238630)
chr4 (763-818)||(37274455-37274510)
chr4 (762-817)||(43623441-43623496)
chr4 (761-816)||(47044740-47044795)
chr4 (772-818)||(7539624-7539670)
chr4 (761-811)||(9241028-9241078)
chr4 (761-819)||(24234668-24234726)
chr4 (768-818)||(28635726-28635776)
chr4 (68-180)||(54734622-54734736)
chr4 (761-814)||(8030204-8030257)
chr4 (761-818)||(9543194-9543251)
chr4 (761-818)||(12798707-12798764)
chr4 (761-810)||(17618304-17618353)
chr4 (762-819)||(20770935-20770992)
chr4 (761-814)||(31826632-31826685)
chr4 (761-818)||(49576890-49576947)
chr4 (761-818)||(53496900-53496957)
[»] chr8 (24 HSPs)
chr8 (94-187)||(19711886-19711981)
chr8 (761-818)||(968385-968442)
chr8 (761-817)||(11492070-11492126)
chr8 (761-816)||(16852363-16852418)
chr8 (68-160)||(3810689-3810782)
chr8 (762-818)||(34628666-34628722)
chr8 (761-812)||(5801070-5801121)
chr8 (761-823)||(30483875-30483937)
chr8 (68-187)||(40041245-40041367)
chr8 (761-818)||(3624603-3624660)
chr8 (761-818)||(7140732-7140789)
chr8 (765-818)||(27871695-27871748)
chr8 (761-814)||(29858049-29858102)
chr8 (761-818)||(35641897-35641954)
chr8 (761-818)||(35690060-35690117)
chr8 (759-818)||(3305184-3305243)
chr8 (762-817)||(6569768-6569823)
chr8 (791-826)||(9271557-9271592)
chr8 (761-816)||(19703485-19703540)
chr8 (761-816)||(28783083-28783138)
chr8 (762-816)||(36205219-36205273)
chr8 (761-818)||(6536543-6536600)
chr8 (761-818)||(18540321-18540378)
chr8 (761-818)||(23361645-23361702)
[»] scaffold0057 (1 HSPs)
scaffold0057 (107-180)||(39488-39562)
[»] chr1 (31 HSPs)
chr1 (759-817)||(15786317-15786375)
chr1 (768-816)||(12259290-12259338)
chr1 (761-818)||(8177178-8177235)
chr1 (761-818)||(9165191-9165248)
chr1 (761-818)||(33700769-33700826)
chr1 (761-818)||(51703802-51703859)
chr1 (762-818)||(12587294-12587350)
chr1 (763-819)||(50901607-50901663)
chr1 (759-818)||(8904435-8904494)
chr1 (761-816)||(17410254-17410309)
chr1 (761-815)||(40257422-40257476)
chr1 (761-818)||(2799885-2799942)
chr1 (761-818)||(6650618-6650675)
chr1 (761-818)||(17745252-17745309)
chr1 (762-818)||(18037609-18037665)
chr1 (761-817)||(31383795-31383851)
chr1 (767-818)||(12370192-12370243)
chr1 (761-816)||(19528325-19528380)
chr1 (761-816)||(24047100-24047155)
chr1 (761-815)||(9117142-9117196)
chr1 (772-818)||(17439951-17439997)
chr1 (761-811)||(21184391-21184441)
chr1 (761-791)||(44046171-44046201)
chr1 (761-791)||(52336797-52336827)
chr1 (780-817)||(7219915-7219952)
chr1 (761-818)||(10526846-10526903)
chr1 (761-818)||(16893417-16893474)
chr1 (761-818)||(21547476-21547533)
chr1 (761-818)||(27476767-27476824)
chr1 (761-818)||(36371493-36371550)
chr1 (761-818)||(51814517-51814574)
[»] scaffold0258 (1 HSPs)
scaffold0258 (761-818)||(15319-15376)
[»] chr5 (20 HSPs)
chr5 (761-818)||(29075804-29075861)
chr5 (765-816)||(84851-84902)
chr5 (762-816)||(41165627-41165681)
chr5 (761-818)||(16773830-16773887)
chr5 (761-818)||(21549133-21549190)
chr5 (761-818)||(22020858-22020915)
chr5 (761-816)||(30883196-30883251)
chr5 (761-818)||(14495801-14495858)
chr5 (761-818)||(29692382-29692439)
chr5 (761-818)||(43442219-43442276)
chr5 (761-817)||(1410657-1410712)
chr5 (763-818)||(14285186-14285241)
chr5 (763-818)||(36958118-36958173)
chr5 (761-818)||(8278271-8278328)
chr5 (769-818)||(12883871-12883920)
chr5 (761-814)||(21589311-21589364)
chr5 (761-818)||(25627080-25627137)
chr5 (761-814)||(30109308-30109361)
chr5 (761-818)||(34984829-34984886)
chr5 (761-818)||(37258362-37258419)
[»] chr7 (33 HSPs)
chr7 (762-809)||(26703149-26703196)
chr7 (768-818)||(3174957-3175007)
chr7 (761-818)||(2446331-2446388)
chr7 (761-818)||(26459406-26459463)
chr7 (766-818)||(9871282-9871334)
chr7 (763-819)||(17041007-17041063)
chr7 (762-818)||(23552142-23552198)
chr7 (72-156)||(26502573-26502657)
chr7 (72-156)||(26590057-26590141)
chr7 (761-813)||(48771961-48772013)
chr7 (761-816)||(20335829-20335884)
chr7 (761-818)||(7309378-7309436)
chr7 (761-818)||(43215207-43215264)
chr7 (761-818)||(45709704-45709761)
chr7 (761-813)||(25590634-25590686)
chr7 (761-804)||(21854571-21854614)
chr7 (761-816)||(22760886-22760941)
chr7 (761-804)||(25021345-25021388)
chr7 (762-817)||(30217903-30217958)
chr7 (759-818)||(33869441-33869500)
chr7 (761-816)||(37085547-37085602)
chr7 (761-816)||(43590930-43590985)
chr7 (756-818)||(5668567-5668629)
chr7 (764-814)||(5934147-5934197)
chr7 (771-813)||(21410711-21410753)
chr7 (764-826)||(22035424-22035486)
chr7 (761-815)||(29785300-29785354)
chr7 (768-818)||(37162346-37162396)
chr7 (761-823)||(39631867-39631929)
chr7 (761-818)||(7721392-7721449)
chr7 (761-818)||(9608625-9608682)
chr7 (761-818)||(9836197-9836254)
chr7 (761-818)||(17113818-17113875)
[»] scaffold0009 (1 HSPs)
scaffold0009 (761-815)||(19846-19900)
[»] scaffold0194 (1 HSPs)
scaffold0194 (761-818)||(13042-13099)
[»] scaffold0021 (1 HSPs)
scaffold0021 (761-818)||(106071-106128)
[»] scaffold0417 (1 HSPs)
scaffold0417 (762-819)||(10243-10300)
[»] scaffold0291 (1 HSPs)
scaffold0291 (761-816)||(2468-2523)
[»] scaffold0180 (1 HSPs)
scaffold0180 (761-818)||(19958-20015)
[»] scaffold0126 (1 HSPs)
scaffold0126 (761-818)||(25343-25400)
[»] scaffold0118 (1 HSPs)
scaffold0118 (761-818)||(41629-41686)
[»] scaffold0008 (1 HSPs)
scaffold0008 (761-818)||(49329-49386)


Alignment Details
Target: chr6 (Bit Score: 770; Significance: 0; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 770; E-Value: 0
Query Start/End: Original strand, 18 - 1003
Target Start/End: Complemental strand, 34787254 - 34786264
Alignment:
Q  18 aaacacaattcccttttgtttaaaactttaatcttacatatctttcctacggaagttatatcctacacccctatatttataccttcattccaacatttga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34787254 aaacacaattcccttttgtttaaaactttaatcttacatatctttcttacggaagttatatcctacacccctacatttataccttcattccaacatttga 34787155  T
Q  118 cacaaactactgtatttaccttttatataaaacaaaacacaattccctttcacttttcaccccaccttttatggagnnnnnnnnn-caagtggcattcac 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||    
T  34787154 cacaaactactgtatttaccttttatataaaacaaaacacaattccctttcacttttcaccccaccttttatggagaaaaaaaaaacaagtggcattcac 34787055  T
Q  217 ccctctttctggnnnnnnnnncaattcgcacttcagctttcaacaaattctcggtgttctcttaatagtttttgtgttatttctcttaatattttcacgt 316  Q
    ||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34787054 ccctctttctggaaaaaaaa-caattcgcacttcagctttcaacaaattctcggtgttctcttaatagtttttgtgttatttctcttaatattttcacgt 34786956  T
Q  317 gtttgtgttttaattgtttactcaagtcattgattgaggtt-------ggttaggttttcttggttagtgggttaccagaatccttaattgaatccttga 409  Q
    ||||||||||||||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786955 gtttgtgttttaattgtttactcaaatcattgattgaggtttgaggttggttaggttttcttggttagtgggttaccagaatccttaattgaatccttga 34786856  T
Q  410 ttgaatcatgttatggaatcttgttcccggaatccttttcaacaaagactttaggttgttatccgaaaaactcgtgcaacgccttccggttttcttctga 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786855 ttgaatcatgttatggaatcttgttcccggaatccttttcaacaaagactttaggttgttatccgaaaaactcgtgcaacgccttccggttttcttctga 34786756  T
Q  510 gaaacgttttatagtgaagtattctggttcaannnnnnnnnnnnnnnnnnaaagttccaaaacacttaaaatctcataaacaactaaagtgatctagnnn 609  Q
    ||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||       
T  34786755 gaaacgttttatagtgaagtattctggttcaattttttatttttttt---aaagttccaaaacacttaaaatctcataaacaactaaagtgatctagttt 34786659  T
Q  610 nnnnggatggatttaaagtaaatttcttttatgggacaaatctgttttcagtgtcttctatgaggaattagatggatattgcgattcatgacacttatct 709  Q
        ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786658 ttttggatggatttaaagtaaatttcttttatgggacaaatctgttttcggtgtcttctatgaggaattagatggatattgcgattcatgacacttatct 34786559  T
Q  710 tctgcaaaatttgttatagtttgatgtaatacaataactttatgatatatagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttc 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786558 tctgcaaaatttgttatagtttgatgtaatacaataactttatgatatatagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttc 34786459  T
Q  810 gattctctcatgtgtcagtcagtttaggtgggccaatttagctttggtggctccgctggtattggtttgtagtgtcctgca-nnnnnnnnacttcagtta 908  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||    
T  34786458 gattctctcatgtgtcagtcagtttaggtgggccaatttagctttggtggctccgctggtattggtttgtagtgtcctgcattttttcttacttcagtta 34786359  T
Q  909 cttttttggtgtgtggttggagctgtcgtgttggttcaacctgtggtttgattccagtcggcagtggtggttttgtgtgtccggttctgtgctgc 1003  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786358 ctttttaggtgtgtggttggagctgtcgtgttggttcaacctgtggtttgattccagtcggcagtggtggttttgtgtgtccggttctgtgctgc 34786264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 773 - 849
Target Start/End: Complemental strand, 13227199 - 13227127
Alignment:
Q  773 gatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaattta 849  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  13227199 gatctgggagtgtgctcctcctcgaagtctcaagttcgattctctcatat----gtcagtttaggtgggccaattta 13227127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 34787289 - 34787239
Alignment:
Q  117 acacaaactactgtatttaccttttatataaaacaaaacacaattcccttt 167  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  34787289 acacaaactactaaatttaccttttatataaaacaaaacacaattcccttt 34787239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 6776660 - 6776603
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||    
T  6776660 gtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctc 6776603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 33549127 - 33549184
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  33549127 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 12188356 - 12188299
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||| | || |||||||||||||||||    
T  12188356 gtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctc 12188299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 12234560 - 12234503
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| ||||||| ||||||||||||||| |||||| |||||| |||||||||||||    
T  12234560 gtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 853
Target Start/End: Complemental strand, 6758475 - 6758387
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaatttagctt 853  Q
    |||||||||| |||| ||||||||||||||  ||||| |||||||| |||||||||||  ||    |||| ||||||||||| ||||||||||    
T  6758475 gtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggt----gtcaatttaggtgggcaaatttagctt 6758387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 21418493 - 21418548
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||    
T  21418493 gtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctc 21418548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 815
Target Start/End: Original strand, 30127423 - 30127477
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    ||||||||||||| |||||||||||||||||  |||| |||||| ||||||||||    
T  30127423 gtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattct 30127477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 817
Target Start/End: Original strand, 12216767 - 12216823
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    ||||||| |||||| ||| || ||||||||||||||| |||||| ||||||||||||    
T  12216767 gtattggtttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctct 12216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 817
Target Start/End: Complemental strand, 32613193 - 32613137
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    |||||| |||||| ||||||||||||||||||||| |  ||||| ||||||||||||    
T  32613193 gtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctct 32613137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 24641243 - 24641188
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||| |||||||||||||||||||||||| ||||| || | | |||||||||||    
T  24641243 gtattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctc 24641188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 804
Target Start/End: Complemental strand, 31623044 - 31623001
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctca 804  Q
    |||||||||||||| |||||||||||||||| ||||| ||||||    
T  31623044 gtattggcttgggacctgggagtgtgctcctcctcgaggtctca 31623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 3715475 - 3715532
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||| ||||||||||| |||| ||  |||| ||||||||||||||||||||    
T  3715475 gtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctc 3715532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 814
Target Start/End: Complemental strand, 10338227 - 10338174
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||||||||    
T  10338227 gtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattc 10338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 32201938 - 32201881
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||  |||||||||||| ||  |||| |||||||||||| ||||    
T  32201938 gtattggcttgggatctcagagtgtgctcctcctttaagtttcaagttcgattatctc 32201881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 5e-25; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 24127945 - 24128068
Alignment:
Q  70 aagttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaattccctttca 169  Q
    |||||||| || | ||||||| |||||||||||||  ||||||||| ||||||||| |   ||||| |||||||||||||||||||||||| ||||||||    
T  24127945 aagttataccccatacccctacatttataccttcaccccaacattttacacaaacttccaaatttatcttttatataaaacaaaacacaatcccctttca 24128044  T
Q  170 cttttcac-cccaccttttatgga 192  Q
    |||||||| || ||||||||||||    
T  24128045 cttttcactccaaccttttatgga 24128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 40606989 - 40606877
Alignment:
Q  71 agttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat-tccctttca 169  Q
    ||||||| || ||||||||  |||||||||||||  |||||||||||||||||||||   ||||||| |||||||||||||| |||||||  |||||||     
T  40606989 agttataccccacacccctgcatttataccttcaccccaacatttgacacaaactaccaaatttaccctttatataaaacaatacacaatcaccctttcc 40606890  T
Q  170 cttttcaccccac 182  Q
    |||||||||||||    
T  40606889 cttttcaccccac 40606877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 707 - 760
Target Start/End: Complemental strand, 6537482 - 6537429
Alignment:
Q  707 tcttctgcaaaatttgttatagtttgatgtaatacaataactttatgatatata 760  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6537482 tcttctgcaaaatgtgttatagtttgatgtaatacaataactttatgatatata 6537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 761 - 817
Target Start/End: Original strand, 26545863 - 26545919
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  26545863 gtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctct 26545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 818
Target Start/End: Original strand, 25637182 - 25637231
Alignment:
Q  769 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  25637182 ttgggatctgggagtgtgctccttctcgaggtctcaggttcggttctctc 25637231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 24128153 - 24128201
Alignment:
Q  270 gtgttctcttaatagtttttgtgttatttctcttaatattttcacgtgt 318  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  24128153 gtgttctcttaatcgtttttgtgttattcctcttaatattttcatgtgt 24128201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 761 - 817
Target Start/End: Complemental strand, 42327448 - 42327392
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    |||||||||||||| |||||||||||||||| ||| | |||||| ||||||||||||    
T  42327448 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 670 - 705
Target Start/End: Original strand, 24128521 - 24128556
Alignment:
Q  670 tgaggaattagatggatattgcgattcatgacactt 705  Q
    ||||||||||||||||||||||||||||||||||||    
T  24128521 tgaggaattagatggatattgcgattcatgacactt 24128556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 39715015 - 39715070
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  39715015 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 811
Target Start/End: Complemental strand, 37756024 - 37755974
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcga 811  Q
    |||||||||||||| |||||| ||||||||| ||||| |||||||||||||    
T  37756024 gtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcga 37755974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 42602577 - 42602634
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||||||| | |||| | ||| |||||||||    
T  42602577 gtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctc 42602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 818
Target Start/End: Complemental strand, 4262354 - 4262298
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||| |||| ||||||||||| ||| | |||||| |||||||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 813
Target Start/End: Original strand, 28846714 - 28846766
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgatt 813  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||| ||||||||    
T  28846714 gtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 814
Target Start/End: Original strand, 42860372 - 42860424
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    ||||| |||| || |||||||||||||||| ||||| ||||||||||||||||    
T  42860372 tattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 19016054 - 19016109
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||| ||  ||||||||||||||| ||||| |||||||||| |||||||    
T  19016054 gtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctc 19016109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 21213792 - 21213847
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||||||||| ||||||||||| |||| || || |||||| |||||||||||    
T  21213792 gtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctc 21213847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 500
Target Start/End: Original strand, 24128285 - 24128340
Alignment:
Q  445 ttttcaacaaagactttaggttgttatccgaaaaactcgtgcaacgccttccggtt 500  Q
    |||||| ||||| |||  |||||||||||| ||||||||||||| |||||||||||    
T  24128285 ttttcaccaaagccttccggttgttatccggaaaactcgtgcaatgccttccggtt 24128340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 29503294 - 29503349
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||| |||||| |||||||||||||||| ||| | |||||| |||||||||||    
T  29503294 gtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 37480098 - 37480153
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||||||||| ||| |||||||||||| ||| | |||||| |||||||||||    
T  37480098 gtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 42922437 - 42922495
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaa-gtctcaagttcgattctctc 818  Q
    |||||||||||| | |||||||||||||||| ||| || |||||| |||||||||||||    
T  42922437 gtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctc 42922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 7799088 - 7799031
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||  ||||||||||||||| |||||  |||||  ||||||||||||    
T  7799088 gtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctc 7799031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 814
Target Start/End: Complemental strand, 12994429 - 12994376
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||||| ||||||| |||||||||||||||| ||  | ||||||||||||||||    
T  12994429 gtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 16918631 - 16918574
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||| ||||||||||||||||||||||| ||| | |||| | ||| |||||||||    
T  16918631 gtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctc 16918574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 767 - 816
Target Start/End: Complemental strand, 40791537 - 40791488
Alignment:
Q  767 gcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||| ||| || |||||||||||||||| | ||||||||||||||||||    
T  40791537 gcttgagatttgagagtgtgctccttctcaaggtctcaagttcgattctc 40791488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 7e-21; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 33573585 - 33573693
Alignment:
Q  72 gttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaattccctttcact 171  Q
    |||||| |||||||||||| ||||||||||| |  ||||||||| |||||||||||   | ||||| |||||||||||||||||| |||| || ||||||    
T  33573585 gttataccctacacccctacatttatacctttaccccaacatttaacacaaactacaaaaattaccctttatataaaacaaaacaaaattacccttcact 33573684  T
Q  172 tttcacccc 180  Q
    |||||||||    
T  33573685 tttcacccc 33573693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 33461231 - 33461340
Alignment:
Q  72 gttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaatt-ccctttcac 170  Q
    |||||| || ||||||||| ||||||||||| |  ||||||||||||||||||||    ||||||| | |||||||||||||||| ||||  ||||||||    
T  33461231 gttataccccacacccctacatttatacctttaccccaacatttgacacaaactatccaatttaccctctatataaaacaaaacaaaattaacctttcac 33461330  T
Q  171 ttttcacccc 180  Q
    ||||||||||    
T  33461331 ttttcacccc 33461340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 4222164 - 4222221
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||||| ||| |||||| | |||||||||||||    
T  4222164 gtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctc 4222221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 51903931 - 51903874
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||||    
T  51903931 gtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctc 51903874  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 763 - 818
Target Start/End: Complemental strand, 10445190 - 10445135
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  10445190 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 10445135  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 2667885 - 2667942
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||| | ||||| |||||| |||||||| ||||    
T  2667885 gtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctc 2667942  T

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Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 4844564 - 4844507
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||||||||||||||||||||||| ||||| |||||| | |||||||||||    
T  4844564 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4844507  T

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Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 4870260 - 4870203
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||||||||||||||||||||||| ||||| |||||| | |||||||||||    
T  4870260 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4870203  T

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Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 29563923 - 29563980
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||| ||||||| |||||||| || |||||||||||| |||||||||||||    
T  29563923 gtattggcttgagatctggaagtgtgcttctcctcgaagtctcaggttcgattctctc 29563980  T

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Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 36720404 - 36720461
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||| ||||||||||||||| ||||| || ||| |||||||||||||    
T  36720404 gtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctc 36720461  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 765 - 818
Target Start/End: Complemental strand, 44743904 - 44743851
Alignment:
Q  765 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctc 44743851  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 761 - 817
Target Start/End: Original strand, 30311329 - 30311385
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    |||| |||||||||||||||||||||||||| ||| | |||||| ||||||||||||    
T  30311329 gtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 30311385  T

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Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 11433784 - 11433673
Alignment:
Q  70 aagttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat-tccctttc 168  Q
    |||||||| || ||| ||||| |||||||| ||||  ||||||||| ||||||||||    ||||||| |||  |||||||||||||||||  ||| |||    
T  11433784 aagttataccccacaaccctacatttatactttcaccccaacatttaacacaaactatcaaatttaccctttgcataaaacaaaacacaatcacccattc 11433685  T
Q  169 acttttcacccc 180  Q
    ||||||||||||    
T  11433684 acttttcacccc 11433673  T

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Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 14339633 - 14339688
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||| ||||||||||||||| ||| | |||||| |||||||||||    
T  14339633 gtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 820
Target Start/End: Original strand, 21960574 - 21960633
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcat 820  Q
    |||||||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||    
T  21960574 gtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctcat 21960633  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 763 - 818
Target Start/End: Complemental strand, 31520656 - 31520601
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||| ||||| |||| | ||| |||||||||    
T  31520656 attggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctc 31520601  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 759 - 818
Target Start/End: Original strand, 40063640 - 40063699
Alignment:
Q  759 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||||| |||| ||||||| ||  | ||||||||||||||||||||    
T  40063640 tagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctc 40063699  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 47454670 - 47454615
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||| ||||| ||||||||||||| ||||| |||||| |||||||||||    
T  47454670 gtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

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Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 812
Target Start/End: Original strand, 9557340 - 9557394
Alignment:
Q  758 atagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgat 812  Q
    ||||||||||||||||||||| |||||||||||| |||||  ||||| |||||||    
T  9557340 atagtattggcttgggatctgagagtgtgctcctcctcgagatctcaggttcgat 9557394  T

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Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 10499162 - 10499105
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||| ||||| | || || |||||| |||||||||||||    
T  10499162 gtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctc 10499105  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 818
Target Start/End: Complemental strand, 30510248 - 30510195
Alignment:
Q  765 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||| || ||||| ||||||||||||| |||||| |||||||||||||    
T  30510248 tggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctc 30510195  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 777 - 818
Target Start/End: Original strand, 36010781 - 36010822
Alignment:
Q  777 tgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  36010781 tgggagtgtgctcctcctcaaagtctcaagttcgattctctc 36010822  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 46518651 - 46518708
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||||| ||| | || ||| ||| |||||||||    
T  46518651 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctc 46518708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 47860779 - 47860835
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||| |||||| ||||||||||||| ||| ||||||| ||||||||||||||    
T  47860779 gtattggctttggatctaggagtgtgctcctcctcaaagtctc-agttcgattctctc 47860835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 818
Target Start/End: Original strand, 27259185 - 27259241
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||| |||||||||||||||| ||||| || ||| ||| |||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctc 27259241  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 818
Target Start/End: Complemental strand, 28703456 - 28703400
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| |||||||||||||||||||||||||  || | |||||| |||||||||||||    
T  28703456 tattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 28703400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 797
Target Start/End: Complemental strand, 31789022 - 31788987
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcga 797  Q
    |||||||||||||||||||||||||||||| |||||    
T  31789022 tattggcttgggatctgggagtgtgctcctcctcga 31788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 32319339 - 32319417
Alignment:
Q  107 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaatt--ccctttcactt-ttcaccccac 182  Q
    ||||||||| |||||||||||   ||||| | ||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  32319339 ccaacattttacacaaactaccaaatttatcctttatataaaataaaacacaattcaccctttcacttgttcaccccac 32319417  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 818
Target Start/End: Complemental strand, 31608574 - 31608520
Alignment:
Q  764 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||| ||||||||||||||||||| ||||| ||||||  || |||||||||    
T  31608574 ttggcttgagatctgggagtgtgctcctcctcgaggtctcagatttgattctctc 31608520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 39253727 - 39253777
Alignment:
Q  768 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||  || | |||||| |||||||||||||    
T  39253727 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 39253777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 771 - 817
Target Start/End: Complemental strand, 52770026 - 52769980
Alignment:
Q  771 gggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    ||||||||||||||||||||| || || |||||| ||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctct 52769980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 814
Target Start/End: Original strand, 8051237 - 8051290
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||||||||||||| |||| ||| |||| || ||||| ||||||||||||||||    
T  8051237 gtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattc 8051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 815
Target Start/End: Complemental strand, 11090217 - 11090164
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    |||||||||||||||||||| ||||||||| ||||| |||| |  |||||||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggtcttagtttcgattct 11090164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 15048114 - 15048057
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| |||||||||||||||| ||||||||| ||| | |||||| |||||||| ||||    
T  15048114 gtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctc 15048057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 815
Target Start/End: Original strand, 26411569 - 26411622
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    ||||| ||||||| ||| |||||||||||||||| | || ||||||||||||||    
T  26411569 tattgacttgggacctgagagtgtgctccttctcaatgtttcaagttcgattct 26411622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 802
Target Start/End: Complemental strand, 28531111 - 28531070
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtct 802  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtct 28531070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 32651491 - 32651434
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||| |  |||||  ||||||||||||    
T  32651491 gtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctc 32651434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 818
Target Start/End: Complemental strand, 37051339 - 37051290
Alignment:
Q  769 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||| |||| ||  |||||||| |||||||||||||    
T  37051339 ttgggatctgggagtgtgttcctccttaaagtctcaggttcgattctctc 37051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 818
Target Start/End: Original strand, 47824146 - 47824195
Alignment:
Q  769 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||| |||||| ||||| ||| ||||||| ||||||||||||||    
T  47824146 ttgggatctgagagtgtactcctcctcaaagtctctagttcgattctctc 47824195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 893 - 836
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  893 gtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctc 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 11551 - 11608
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  11551 gtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 11608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 1e-16; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 761 - 826
Target Start/End: Original strand, 13015450 - 13015515
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtca 826  Q
    ||||||||||||||  ||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  13015450 gtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtca 13015515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 765 - 816
Target Start/End: Original strand, 39509097 - 39509148
Alignment:
Q  765 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

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Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 765 - 818
Target Start/End: Complemental strand, 2185081 - 2185028
Alignment:
Q  765 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||| | |||||||||||||||||||| |||||||| |||||||||||||    
T  2185081 tggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctc 2185028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 7292851 - 7292794
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| | |||||||||||||||| ||| |||||||| |||||||||||||    
T  7292851 gtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctc 7292794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 37109404 - 37109347
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  37109404 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 37109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 814
Target Start/End: Original strand, 38869791 - 38869844
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||||||||    
T  38869791 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 38869844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 766 - 818
Target Start/End: Original strand, 8306513 - 8306565
Alignment:
Q  766 ggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| || |||||||||||||||| |||||||||| |||||||||||||||    
T  8306513 ggcttgagacctgggagtgtgctcctcctcgaagtcttaagttcgattctctc 8306565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 818
Target Start/End: Original strand, 23377980 - 23378036
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 23378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 770 - 818
Target Start/End: Complemental strand, 40813362 - 40813314
Alignment:
Q  770 tgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  40813362 tgggatctgggagtgtgctccttttcgaagtctcaggttcgatactctc 40813314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 44253881 - 44253973
Alignment:
Q  68 ggaagttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat 160  Q
    |||||||||| || |||||| ||||||||||||||||  ||||||||| ||||||| |  |   |||||| ||||||||||| ||||||||||    
T  44253881 ggaagttataccccacacccatatatttataccttcaccccaacatttaacacaaagttttaattttaccctttatataaaataaaacacaat 44253973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 763 - 818
Target Start/End: Complemental strand, 2622446 - 2622391
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  2622446 attggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctc 2622391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 853
Target Start/End: Complemental strand, 7949507 - 7949419
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaatttagctt 853  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||||||||||||  ||    |||| ||||||||||| ||||||||||    
T  7949507 gtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggt----gtcaatttaggtgggctaatttagctt 7949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 30938272 - 30938217
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||| ||||||||| ||||||||||||| ||||| |||||| |||||||||||    
T  30938272 gtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 55427253 - 55427198
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||| |||||||||||    
T  55427253 gtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 815
Target Start/End: Complemental strand, 41347016 - 41346962
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    ||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||||    
T  41347016 gtattggtttgagatctgggagtatgctcctcctcgaagtctcaggttcgattct 41346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 21660197 - 21660140
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||| ||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  21660197 gtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctc 21660140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 21668961 - 21668904
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||| ||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  21668961 gtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctc 21668904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 814
Target Start/End: Complemental strand, 51250575 - 51250522
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    ||||||||||||||||||||||||||||||  ||| |  |||||||||||||||    
T  51250575 gtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattc 51250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 764 - 816
Target Start/End: Original strand, 32992638 - 32992690
Alignment:
Q  764 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||| || ||||||||||||| ||| | ||||||||||||||||||    
T  32992638 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctc 32992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 19238630 - 19238575
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||||    
T  19238630 gtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 818
Target Start/End: Complemental strand, 37274510 - 37274455
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| |||||||||||||||| ||| | |||| | |||||||||||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 37274455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 817
Target Start/End: Complemental strand, 43623496 - 43623441
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    ||||| |||| |||| |||||||||||||| || ||||||||| ||||||||||||    
T  43623496 tattgacttgagatcagggagtgtgctcctccttgaagtctcaggttcgattctct 43623441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 47044740 - 47044795
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||| ||||||||||| |||| ||||||| ||||| |||||| |||||||||||    
T  47044740 gtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 772 - 818
Target Start/End: Original strand, 7539624 - 7539670
Alignment:
Q  772 ggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| ||||||||||| | |||||| |||||||||||||    
T  7539624 ggatctgggagtatgctccttctcaaggtctcaggttcgattctctc 7539670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 811
Target Start/End: Complemental strand, 9241078 - 9241028
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcga 811  Q
    ||||||||||||||||||| ||||||||||| ||||| |||| | ||||||    
T  9241078 gtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttcga 9241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 819
Target Start/End: Original strand, 24234668 - 24234726
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 819  Q
    ||||||||||||||  ||||||||||||| | ||  | |||||||||||||||||||||    
T  24234668 gtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctca 24234726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 28635726 - 28635776
Alignment:
Q  768 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||||||||| || || |||| | |||||||||||||    
T  28635726 cttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctc 28635776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 54734622 - 54734736
Alignment:
Q  68 ggaagttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatat-aaaacaaaacacaattccctt 166  Q
    |||||||||| || | ||||||| | |||||||||||  | |||||| ||||||||||||   ||||||| ||||||| |||| ||||||||||  || |    
T  54734622 ggaagttataccccatacccctacaattataccttcaccctaacattagacacaaactaccaaatttaccctttatataaaaataaaacacaatcaccat 54734721  T
Q  167 tcactt-ttcacccc 180  Q
    |||||| ||||||||    
T  54734722 tcacttgttcacccc 54734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 814
Target Start/End: Complemental strand, 8030257 - 8030204
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||| |||||||||  ||||||||||||||| ||| | ||||||||||||||||    
T  8030257 gtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattc 8030204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 9543194 - 9543251
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| |||||| ||||||  |||||||| |||||| ||||||||| ||||||||||||    
T  9543194 gtatcggcttgagatctgatagtgtgcttcttctcaaagtctcaaattcgattctctc 9543251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 12798707 - 12798764
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||| ||| |||||||||||||||| || ||||| || ||| |||||||||||||    
T  12798707 gtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggttcgattctctc 12798764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 810
Target Start/End: Original strand, 17618304 - 17618353
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcg 810  Q
    ||||||||||| || |||||||||||||||| ||||| |||||| |||||    
T  17618304 gtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcg 17618353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 819
Target Start/End: Original strand, 20770935 - 20770992
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 819  Q
    ||||||||||  ||||||  ||||| |||||||| | |||||||||||||||||||||    
T  20770935 tattggcttgaaatctggatgtgtgttccttctcaaggtctcaagttcgattctctca 20770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 814
Target Start/End: Original strand, 31826632 - 31826685
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||| |||||||||| || |||||||||||| ||| | ||||||||||||||||    
T  31826632 gtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattc 31826685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 49576947 - 49576890
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||| |||  ||||||||||||||| ||| | |||||| |||||||||||||    
T  49576947 gtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 53496900 - 53496957
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||  || |||||||||    
T  53496900 gtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctc 53496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 19711981 - 19711886
Alignment:
Q  94 ttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat-tccctttcacttttcacc-ccacctttt 187  Q
    |||||||||||  ||||||||||||| |||||||   ||||||| ||||||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  19711981 ttataccttcaccccaacatttgacataaactaccaaatttaccctttatataaaacaaaccacaatcaccctttcacttttcaccgccacctttt 19711886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 968385 - 968442
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  968385 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 761 - 817
Target Start/End: Complemental strand, 11492126 - 11492070
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    ||||||||||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  11492126 gtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctct 11492070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 16852363 - 16852418
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  16852363 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 3810689 - 3810782
Alignment:
Q  68 ggaagttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtattta-ccttttatataaaacaaaacacaat 160  Q
    |||||||||| || ||||||||| ||||||||||| |  ||||||||||||||||| |||   ||||| |||||||||||||| ||||| ||||    
T  3810689 ggaagttataccccacacccctacatttataccttgaccccaacatttgacacaaagtaccaaatttacccttttatataaaataaaactcaat 3810782  T

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Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 818
Target Start/End: Original strand, 34628666 - 34628722
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||| | || ||| |||||||| |||||||||||||    
T  34628666 tattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgattctctc 34628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 812
Target Start/End: Original strand, 5801070 - 5801121
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgat 812  Q
    ||||| ||||||||||| |||||||||||| |||||| ||||||||||||||    
T  5801070 gtattagcttgggatctaggagtgtgctccgtctcgacgtctcaagttcgat 5801121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 823
Target Start/End: Complemental strand, 30483937 - 30483875
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtg 823  Q
    ||||||||||||||| ||||||||||||||| |||  ||||||| |||| |||||||| ||||    
T  30483937 gtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtg 30483875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 40041367 - 40041245
Alignment:
Q  68 ggaagttatatcctacacccct-atatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat-tccct 165  Q
    ||||||||||||| |||||||  | |||||||| ||||| ||||||||| |||||||||||   ||||||  |||  |||||||||||||||||  | |     
T  40041367 ggaagttatatcccacacccccgacatttatacgttcatcccaacatttaacacaaactaccaaatttactctttgcataaaacaaaacacaatcactcg 40041268  T
Q  166 ttcacttttc-accccacctttt 187  Q
    |||||||||| ||||||||||||    
T  40041267 ttcacttttcaaccccacctttt 40041245  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 3624603 - 3624660
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| ||||||||||||||||  || | |||||| |||||||||||||    
T  3624603 gtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 7140732 - 7140789
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||||| |||||||||| |||||  |||||  ||||||||||||    
T  7140732 gtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctctc 7140789  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 818
Target Start/End: Original strand, 27871695 - 27871748
Alignment:
Q  765 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||| ||||| || |||| ||| ||||||||||||||||||||||    
T  27871695 tggcttgggatcttggagtttgttcctcctcaaagtctcaagttcgattctctc 27871748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 814
Target Start/End: Complemental strand, 29858102 - 29858049
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||||||||||||| | |||||||||||||| ||||| |||||| |||||||||    
T  29858102 gtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 35641954 - 35641897
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| |||||| ||| ||||||||||||||| ||||| |||||| |||||||||||||    
T  35641954 gtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctc 35641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 35690117 - 35690060
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||||| || ||||||| ||| | |||||| |||||||||||||    
T  35690117 gtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctc 35690060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 818
Target Start/End: Complemental strand, 3305243 - 3305184
Alignment:
Q  759 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||| |||||||||||||| |||||||| ||| | ||||||| ||||||| ||||    
T  3305243 tagtattggtttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctc 3305184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 817
Target Start/End: Complemental strand, 6569823 - 6569768
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    |||||||||||||||||||||||||||||| ||  | || ||| ||||||||||||    
T  6569823 tattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctct 6569768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 791 - 826
Target Start/End: Complemental strand, 9271592 - 9271557
Alignment:
Q  791 ttctcgaagtctcaagttcgattctctcatgtgtca 826  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9271592 ttctcaaagtctcaagttcgattctctcatgtgtca 9271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 19703540 - 19703485
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||||||||| ||| |||||||||||| ||| | |||||| |||||||||||    
T  19703540 gtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 28783083 - 28783138
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||| || |||||||||||||||| ||| | |||||| |||||||||||    
T  28783083 gtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctc 28783138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 762 - 816
Target Start/End: Original strand, 36205219 - 36205273
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||| ||| ||||||||||||||||||| ||| | |||||| |||||||||||    
T  36205219 tattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttcgattctc 36205273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 6536543 - 6536600
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||| ||||||||    
T  6536543 gtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctc 6536600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 18540321 - 18540378
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||| || || ||| | |||||| |||||||||||||    
T  18540321 gtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctc 18540378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 23361702 - 23361645
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||| |||| ||||||||    
T  23361702 gtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctc 23361645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 39562 - 39488
Alignment:
Q  107 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaatt-ccctttcacttttcacccc 180  Q
    |||||||||||||||||||||   ||||| | ||||||||||||||||||||||| || ||||||||||||||||    
T  39562 ccaacatttgacacaaactaccaaatttatcctttatataaaacaaaacacaattaccttttcacttttcacccc 39488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 759 - 817
Target Start/End: Complemental strand, 15786375 - 15786317
Alignment:
Q  759 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| ||||||||||||    
T  15786375 tagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 768 - 816
Target Start/End: Original strand, 12259290 - 12259338
Alignment:
Q  768 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12259290 cttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctc 12259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 8177235 - 8177178
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||||| ||| | || ||| |||||||||||||    
T  8177235 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 8177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 9165248 - 9165191
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||| |||||||| |||| ||||||||    
T  9165248 gtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctc 9165191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 33700826 - 33700769
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| |||||||||||||||||| ||| | |||||| |||||||||||||    
T  33700826 gtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 33700769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 51703802 - 51703859
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| |||||||||||||||||| ||| |||| ||| |||||||||||||    
T  51703802 gtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctc 51703859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 818
Target Start/End: Original strand, 12587294 - 12587350
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||| ||||||||||| |||||||||||| ||||| |||||| |||||||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 763 - 819
Target Start/End: Original strand, 50901607 - 50901663
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 819  Q
    |||||||||||| |||| ||||||||||| ||||| ||||||| |||||||||||||    
T  50901607 attggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctca 50901663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 759 - 818
Target Start/End: Original strand, 8904435 - 8904494
Alignment:
Q  759 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||| |||||||| || |||||||||||| ||| | ||||||||||||||||||||    
T  8904435 tagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctc 8904494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 17410254 - 17410309
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||| |||||||||||||||||| |||| |||||  |||||||||||||||||    
T  17410254 gtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctc 17410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 815
Target Start/End: Original strand, 40257422 - 40257476
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    ||||||||||| || |||||||||||||||| ||||| ||||||||||| |||||    
T  40257422 gtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattct 40257476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 2799885 - 2799942
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| |||||| ||||||||||||||||||| ||| | |||||| |||||||||||||    
T  2799885 gtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 2799942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 6650618 - 6650675
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||| |||||| ||||||| ||| | |||||| |||||||||||||    
T  6650618 gtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctc 6650675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 17745309 - 17745252
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| ||| | |||||||||| ||||| |||||| |||||||||||||    
T  17745309 gtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctc 17745252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 818
Target Start/End: Complemental strand, 18037665 - 18037609
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| ||||||  |||||||||||||||| ||||  |||||||||||||||||||    
T  18037665 tattggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctc 18037609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 817
Target Start/End: Complemental strand, 31383851 - 31383795
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    |||||||||||||| |||||||||||||||| || |  |||||| ||||||||||||    
T  31383851 gtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctct 31383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 767 - 818
Target Start/End: Original strand, 12370192 - 12370243
Alignment:
Q  767 gcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||| |||||||||||||||| ||||| |||||| ||| |||||||||    
T  12370192 gcttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 12370243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 19528380 - 19528325
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||||||||||||  |||||||||||| ||| | |||||| |||||||||||    
T  19528380 gtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

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Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 24047155 - 24047100
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||| ||  ||||||||||||||| ||||| || |||||||||||||||    
T  24047155 gtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctc 24047100  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 815
Target Start/End: Original strand, 9117142 - 9117196
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    |||| |||||||||||||| ||||||||||| || || |||||| ||||||||||    
T  9117142 gtatgggcttgggatctggaagtgtgctcctccttgaggtctcaggttcgattct 9117196  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 772 - 818
Target Start/End: Original strand, 17439951 - 17439997
Alignment:
Q  772 ggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||||||||| ||||| |||||| ||| |||||||||    
T  17439951 ggatctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 17439997  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 811
Target Start/End: Complemental strand, 21184441 - 21184391
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcga 811  Q
    |||||||||||||| ||| |||||||||||||||  | |||||||||||||    
T  21184441 gtattggcttgggacctgcgagtgtgctccttctgaaggtctcaagttcga 21184391  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 791
Target Start/End: Complemental strand, 44046201 - 44046171
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctcct 791  Q
    |||||||||||||||||||||||||||||||    
T  44046201 gtattggcttgggatctgggagtgtgctcct 44046171  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 791
Target Start/End: Complemental strand, 52336827 - 52336797
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctcct 791  Q
    |||||||||||||||||||||||||||||||    
T  52336827 gtattggcttgggatctgggagtgtgctcct 52336797  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 780 - 817
Target Start/End: Complemental strand, 7219952 - 7219915
Alignment:
Q  780 gagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  7219952 gagtgtgctcctcctcgaagtctcaggttcgattctct 7219915  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 10526846 - 10526903
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||| ||||||| ||| | ||||||  ||||||||||||    
T  10526846 gtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctc 10526903  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 16893417 - 16893474
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||| ||| ||||||||| ||||| ||||| |||||| |||||||| ||||    
T  16893417 gtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctc 16893474  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 21547533 - 21547476
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||  |||||| |||||||| ||||| || ||| |||||||||||||    
T  21547533 gtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctc 21547476  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 27476824 - 27476767
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||  | ||||||||||||| |||||  ||||||||| |||||||||    
T  27476824 gtattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctc 27476767  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 36371493 - 36371550
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| | |||||||||||||||| ||| | |||| | |||||||||||||    
T  36371493 gtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctc 36371550  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 51814517 - 51814574
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||| |||||| |||||||||||| ||| | |||||| |||||||||||||    
T  51814517 gtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

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Target: scaffold0258 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 15376 - 15319
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  15376 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

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Target: chr5 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 29075804 - 29075861
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||||    
T  29075804 gtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctc 29075861  T

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Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 765 - 816
Target Start/End: Original strand, 84851 - 84902
Alignment:
Q  765 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

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Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 762 - 816
Target Start/End: Complemental strand, 41165681 - 41165627
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||| |||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  41165681 tattagcttgggatctgggagtgtgctccttctcgaagtcttagattcgattctc 41165627  T

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Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 16773830 - 16773887
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  16773830 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 16773887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 21549190 - 21549133
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||  ||||||||||||||||| ||||    
T  21549190 gtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctc 21549133  T

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Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 22020915 - 22020858
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||    
T  22020915 gtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctc 22020858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 30883251 - 30883196
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||||||||||| |||||||||||||||| ||| | ||||||||||| ||||||    
T  30883251 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctc 30883196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 14495858 - 14495801
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||  || |||||||||    
T  14495858 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctc 14495801  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 29692439 - 29692382
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||| |||  ||||||||    
T  29692439 gtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctc 29692382  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 43442219 - 43442276
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||| ||| ||||||||||||||||||| ||| | |||||| |||||||||||||    
T  43442219 gtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 43442276  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 817
Target Start/End: Complemental strand, 1410712 - 1410657
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    |||||| |||||||| ||||||||||||||| ||||| ||||| |||||||||||||    
T  1410712 gtattgacttgggatatgggagtgtgctcctcctcgaggtctc-agttcgattctct 1410657  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 818
Target Start/End: Original strand, 14285186 - 14285241
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||| | |||||||||||||||| ||| | |||||| |||||||||||||    
T  14285186 attggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 14285241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 818
Target Start/End: Complemental strand, 36958173 - 36958118
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||| ||| |||||||||| ||||  ||||||||||| |||||||||||||    
T  36958173 attggcttgagatttgggagtgtgttcctcatcgaagtctcaggttcgattctctc 36958118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 8278328 - 8278271
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||  ||||||||||||||| |||||  ||||||||| |||| ||||    
T  8278328 gtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctc 8278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 769 - 818
Target Start/End: Original strand, 12883871 - 12883920
Alignment:
Q  769 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||| || || |||||| |||| ||||||||    
T  12883871 ttgggatctgggagtgtgctcctccttgaggtctcatgttcaattctctc 12883920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 814
Target Start/End: Original strand, 21589311 - 21589364
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||||||||||||| |||||||| |||| || ||||| |||||| |||||||||    
T  21589311 gtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattc 21589364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 25627080 - 25627137
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| |  ||||||||||||||| ||| | |||||| |||||||||||||    
T  25627080 gtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 25627137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 814
Target Start/End: Complemental strand, 30109361 - 30109308
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    ||||||||||| || |||||||||||||||| || || |||||| |||||||||    
T  30109361 gtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 34984829 - 34984886
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| | |||||||||||||||| ||| | |||| | |||||||||||||    
T  34984829 gtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 34984886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 37258419 - 37258362
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||| ||||||||||| ||||||||||||| ||| | || ||| |||||||||||||    
T  37258419 gtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctc 37258362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 762 - 809
Target Start/End: Original strand, 26703149 - 26703196
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttc 809  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggtctcaggttc 26703196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 3174957 - 3175007
Alignment:
Q  768 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  3174957 cttgggatctgggagtgtgctccatctcgaggtctcaggttcgattctctc 3175007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 2446331 - 2446388
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||  ||||||||||||||| |||||  |||||||||||||||||||    
T  2446331 gtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctc 2446388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 26459463 - 26459406
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  26459463 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 26459406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 766 - 818
Target Start/End: Complemental strand, 9871334 - 9871282
Alignment:
Q  766 ggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||| ||||||||||||||| ||||||||||||  ||||||||||||    
T  9871334 ggcttgggatttgggagtgtgctcctcctcgaagtctcagattcgattctctc 9871282  T

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Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 763 - 819
Target Start/End: Complemental strand, 17041063 - 17041007
Alignment:
Q  763 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 819  Q
    ||||||||||||||||| ||||||||||| ||| | |||||| ||||||||||||||    
T  17041063 attggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctca 17041007  T

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Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 818
Target Start/End: Original strand, 23552142 - 23552198
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||| ||||||| |||||||||||||||| ||| | ||||||||||||||||||||    
T  23552142 tattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctc 23552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 26502573 - 26502657
Alignment:
Q  72 gttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaaca 156  Q
    |||||| || ||||||||| ||||||||||| |  |||||||||||||||||||||   ||||||| | | ||||||||||||||    
T  26502573 gttataccccacacccctacatttatacctttaccccaacatttgacacaaactacccaatttaccctctttataaaacaaaaca 26502657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 26590141 - 26590057
Alignment:
Q  72 gttatatcctacacccctatatttataccttcattccaacatttgacacaaactactgtatttaccttttatataaaacaaaaca 156  Q
    |||||| || ||||||||| ||||||||||| |  |||||||||||||||||||||   ||||||| | | ||||||||||||||    
T  26590141 gttataccccacacccctacatttatacctttaccccaacatttgacacaaactacccaatttaccctctttataaaacaaaaca 26590057  T

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Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 761 - 813
Target Start/End: Original strand, 48771961 - 48772013
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgatt 813  Q
    ||||||||||||||||||||||||||||||| || || |||||| ||||||||    
T  48771961 gtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 20335884 - 20335829
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||| |||||||||||    
T  20335884 gtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 7309378 - 7309436
Alignment:
Q  761 gtattggcttgggatctggg-agtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||| ||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  7309378 gtattagcttggggtctggggagtgtgctcctcctcgaggtctcaagttcgattctctc 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 43215207 - 43215264
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||||||||||||    
T  43215207 gtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctc 43215264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 45709761 - 45709704
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||| |||||||||||| |||||||||||| ||||| |||||| |||||||| ||||    
T  45709761 gtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctc 45709704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 761 - 813
Target Start/End: Original strand, 25590634 - 25590686
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgatt 813  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||  ||||||||    
T  25590634 gtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgatt 25590686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 804
Target Start/End: Original strand, 21854571 - 21854614
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctca 804  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||    
T  21854571 gtattggctagggatctgggagtgtgctcctcctcaaagtctca 21854614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 22760886 - 22760941
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    |||||| ||||||| |||||||||||||||| ||| | |||||| |||||||||||    
T  22760886 gtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 804
Target Start/End: Complemental strand, 25021388 - 25021345
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctca 804  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||    
T  25021388 gtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 817
Target Start/End: Original strand, 30217903 - 30217958
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 817  Q
    ||||||||||  |||||| ||||||||||| ||| | |||||||||||||||||||    
T  30217903 tattggcttgatatctggaagtgtgctcctcctcaaggtctcaagttcgattctct 30217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 818
Target Start/End: Complemental strand, 33869500 - 33869441
Alignment:
Q  759 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||| || |||| ||||||||||||||| | |||||  |||||||||||||    
T  33869500 tagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctc 33869441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 37085602 - 37085547
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||| ||||||||||||| | ||||| || ||| |||||||||||    
T  37085602 gtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Original strand, 43590930 - 43590985
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||||||||||  ||||||||||||||| ||| | |||||| |||||||||||    
T  43590930 gtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 756 - 818
Target Start/End: Complemental strand, 5668629 - 5668567
Alignment:
Q  756 atatagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| ||||||||||||||  ||| ||||||||||| ||||| |||||| | |||||||||||    
T  5668629 atatggtattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctc 5668567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 814
Target Start/End: Original strand, 5934147 - 5934197
Alignment:
Q  764 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 814  Q
    |||||||||||||||||||||||||||| || || || ||| |||||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggtttcatgttcgattc 5934197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 771 - 813
Target Start/End: Complemental strand, 21410753 - 21410711
Alignment:
Q  771 gggatctgggagtgtgctccttctcgaagtctcaagttcgatt 813  Q
    |||||||| |||||||||||| ||||||||||||| |||||||    
T  21410753 gggatctgagagtgtgctcctcctcgaagtctcaaattcgatt 21410711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 764 - 826
Target Start/End: Original strand, 22035424 - 22035486
Alignment:
Q  764 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtca 826  Q
    ||||||||||| ||| |||||||||||| ||||| | | || ||||||||||||| |||||||    
T  22035424 ttggcttgggacctgagagtgtgctcctcctcgaggacccaggttcgattctctcctgtgtca 22035486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 815
Target Start/End: Complemental strand, 29785354 - 29785300
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    |||| |||||||||||||| ||||||||||| ||| | |||||| ||||||||||    
T  29785354 gtataggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattct 29785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 818
Target Start/End: Complemental strand, 37162396 - 37162346
Alignment:
Q  768 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| ||| |||||||||||| |||||| | ||||||||||||||||||||    
T  37162396 cttgagatttgggagtgtgcttcttctcaaggtctcaagttcgattctctc 37162346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 761 - 823
Target Start/End: Original strand, 39631867 - 39631929
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtg 823  Q
    |||||||||||||| ||||||||  |||||| ||| | |||||| ||||||||||||| ||||    
T  39631867 gtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtg 39631929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 7721392 - 7721449
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||| |||||| |||||||||| ||||| ||| | |||||| |||||||||||||    
T  7721392 gtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctc 7721449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 9608682 - 9608625
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| |||||||||||||||||||| ||||| ||| |  ||||| |||||||||||||    
T  9608682 gtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctc 9608625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 9836254 - 9836197
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||| |||||||||||||||||||| ||||| ||| |  ||||| |||||||||||||    
T  9836254 gtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctc 9836197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 17113818 - 17113875
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||| | | ||||||||||||| || ||| | ||||||||||||||||||||    
T  17113818 gtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctc 17113875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 761 - 815
Target Start/End: Complemental strand, 19900 - 19846
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 815  Q
    ||||||||||||||||||||||| ||||||| || || |||||||||||||||||    
T  19900 gtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 13099 - 13042
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||| ||||||||||||||||||| ||| | |||||| |||||||||||||    
T  13099 gtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 106071 - 106128
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||| |||||||| | ||||||||||| ||||||||||||| |||||||||||||||    
T  106071 gtattagcttgggaccagggagtgtgctgcttctcgaagtctaaagttcgattctctc 106128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 762 - 819
Target Start/End: Original strand, 10243 - 10300
Alignment:
Q  762 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 819  Q
    ||||||||||||||||||||||| ||  || |||||||||| ||||| ||||||||||    
T  10243 tattggcttgggatctgggagtgcgcctctcctcgaagtcttaagtttgattctctca 10300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 816
Target Start/End: Complemental strand, 2523 - 2468
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 816  Q
    ||||||| || |||||||||||||||||||| ||| | |||||| |||||||||||    
T  2523 gtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 20015 - 19958
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    |||||||||||| | |||||||| ||||||| ||| | |||||| |||||||||||||    
T  20015 gtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctc 19958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 25400 - 25343
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||| ||  ||||||||||||||||||| | |||||| |||||||| ||||    
T  25400 gtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctc 25343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Complemental strand, 41686 - 41629
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||| |||||| |||| ||||||| ||||| |||||| |||| ||||||||    
T  41686 gtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctc 41629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 818
Target Start/End: Original strand, 49329 - 49386
Alignment:
Q  761 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 818  Q
    ||||||||||||||| || ||||||||||||  |||| || ||| |||||||||||||    
T  49329 gtattggcttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctc 49386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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