View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5020_high_5 (Length: 330)

Name: NF5020_high_5
Description: NF5020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5020_high_5
NF5020_high_5
[»] chr4 (12 HSPs)
chr4 (1-312)||(23992398-23992709)
chr4 (79-212)||(55032754-55032888)
chr4 (212-275)||(56540106-56540169)
chr4 (271-312)||(10259403-10259444)
chr4 (271-312)||(24077472-24077513)
chr4 (271-312)||(26924342-26924383)
chr4 (271-312)||(43332532-43332573)
chr4 (271-312)||(51452599-51452640)
chr4 (3-35)||(55032722-55032754)
chr4 (277-312)||(19591008-19591043)
chr4 (271-312)||(21565011-21565052)
chr4 (275-312)||(28120263-28120300)
[»] chr2 (6 HSPs)
chr2 (1-305)||(7768766-7769088)
chr2 (214-275)||(25124813-25124874)
chr2 (271-312)||(3711079-3711120)
chr2 (271-312)||(11866296-11866337)
chr2 (271-312)||(24278975-24279016)
chr2 (271-312)||(35357689-35357730)
[»] chr5 (4 HSPs)
chr5 (1-312)||(39169425-39169761)
chr5 (271-312)||(18037309-18037350)
chr5 (273-306)||(19365869-19365902)
chr5 (271-312)||(37464501-37464542)
[»] chr1 (1 HSPs)
chr1 (212-275)||(48183440-48183503)
[»] chr7 (9 HSPs)
chr7 (272-306)||(42298892-42298926)
chr7 (271-312)||(19033725-19033766)
chr7 (271-312)||(20720870-20720911)
chr7 (271-312)||(20765532-20765573)
chr7 (271-312)||(29491110-29491151)
chr7 (271-312)||(33230031-33230072)
chr7 (271-312)||(34282173-34282214)
chr7 (213-259)||(20266744-20266790)
chr7 (273-305)||(23476673-23476705)
[»] chr8 (4 HSPs)
chr8 (271-312)||(20662997-20663038)
chr8 (271-312)||(30548360-30548401)
chr8 (271-312)||(44213114-44213155)
chr8 (271-312)||(12661036-12661077)
[»] chr6 (4 HSPs)
chr6 (271-312)||(250045-250086)
chr6 (271-312)||(12579856-12579897)
chr6 (271-312)||(33979106-33979147)
chr6 (271-312)||(3052084-3052125)
[»] chr3 (3 HSPs)
chr3 (271-312)||(918819-918860)
chr3 (271-312)||(44072786-44072827)
chr3 (272-306)||(22759140-22759174)
[»] scaffold0004 (1 HSPs)
scaffold0004 (273-306)||(81010-81043)


Alignment Details
Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 23992709 - 23992398
Alignment:
Q  1 acatgatgtactatgagattcctaattgactactttctcttcatcaaagatttagagctccatatgtttggtcttaaatatgaagcactgcattatctaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  23992709 acatgatgtactatgagattcctaattgactactttctcttcatcaaagatttagagctccatatgtttggtcctaaatatgaagcactgcattatgtaa 23992610  T
Q  101 tagggatatgatacttaggttgtggcaataagtgataggagtttggaaattcacttttaaactcagtaatcaaggagcgcacccacaaaatttctgcaag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23992609 tagggatatgatacttaggttgtggcaataagtgataggagtttggaaattcacttttaaactcagtaatcaaggagggcacccacaaaatttctgcaag 23992510  T
Q  201 cagtgctcacaagtttatcgttttagtagcgactcaggttcaaatattaataagttttagcaattaacaaattttgataaatatttataatgtttgtgca 300  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  23992509 cagtgctcacaagtttatcgttttagtagcgactcatgttcaaatactaataagttttagtaattaacaaattttgataaatatttaaaatgtttgtgca 23992410  T
Q  301 atattcagtaat 312  Q
    ||||||||||||    
T  23992409 atattcagtaat 23992398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 55032754 - 55032888
Alignment:
Q  79 tatgaagcactgcattatctaatagggatatgata-cttaggttgtggcaataagtgataggagtttggaaattcacttttaaactcagtaatcaaggag 177  Q
    |||||||||||| ||||| |||||||||||  ||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  55032754 tatgaagcactgtattatgtaatagggatacaataacttaagttgtcacaataagtgataggagtttggaaattcacttttaaactcagtaatcaaggat 55032853  T
Q  178 cgcacccacaaaatttctgcaagcagtgctcacaa 212  Q
     ||||||||||||||||||||||||||||| ||||    
T  55032854 ggcacccacaaaatttctgcaagcagtgctgacaa 55032888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 56540106 - 56540169
Alignment:
Q  212 agtttatcgttttagtagcgactcaggttcaaatattaataagttttagcaattaacaaatttt 275  Q
    |||||||| ||||||||| || ||| ||||||||| ||||||||||||||| | ||||||||||    
T  56540106 agtttatcattttagtagtgattcaagttcaaataataataagttttagcagtaaacaaatttt 56540169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 10259444 - 10259403
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  10259444 attttgataaagatttataatgtttgtgcaatattcattaat 10259403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 24077513 - 24077472
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  24077513 attttgataaagatttataatgtttgtgcaatattcattaat 24077472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 26924383 - 26924342
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  26924383 attttgataaagatttataatgtttgtgcaatattcattaat 26924342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 43332532 - 43332573
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  43332532 attttgataaagatttataatgtttgtgcaatattcattaat 43332573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 51452599 - 51452640
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  51452599 attttgataaagatttataatgtttgtgcaatattcattaat 51452640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 55032722 - 55032754
Alignment:
Q  3 atgatgtactatgagattcctaattgactactt 35  Q
    |||||||||||||||||||||||||||||||||    
T  55032722 atgatgtactatgagattcctaattgactactt 55032754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 312
Target Start/End: Original strand, 19591008 - 19591043
Alignment:
Q  277 ataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19591008 ataaatatttataatgtttgtgcaatattcattaat 19591043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 21565011 - 21565052
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||    
T  21565011 attttgataaagatttataatgtttatgcaatattcattaat 21565052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 28120300 - 28120263
Alignment:
Q  275 tgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  28120300 tgataaagatttataatgtttgtgcaatattcattaat 28120263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 7769088 - 7768766
Alignment:
Q  1 acatgatgtactatgagattcctaattgactactttctcttcatcaaagatttagagctccatatgtttggtcttaaatatgaagcactgcattatctaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||    
T  7769088 acatgatgtactatgagatttctaattgactactttctcttcatcaaagatttagagcttcatatgtttggtcctaaatatgaagcactgcattatgtaa 7768989  T
Q  101 tagggatatgatacttaggttgtggcaataagtgataggagtttggaaattcacttttaaactcagtaatcaaggagcgcacccacaaaatttctgcaag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  7768988 tagggatatgatacttaggttgtggcaataagtgataggagtttggaaattcacttttaaactcagtaatcaaagaggacacccacaaaatttctgcaag 7768889  T
Q  201 cagtgctcaca------------------agtttatcgttttagtagcgactcaggttcaaatattaataagttttagcaattaacaaattttgataaat 282  Q
    | ||||| |||                  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7768888 cggtgctgacaatgttgttgtattttgatagtttatcgttttagtaacgactcaggttcaaatactaataagttttagcaattaacaaattttgataaat 7768789  T
Q  283 atttataatgtttgtgcaatatt 305  Q
    |||||||||||||||||||||||    
T  7768788 atttataatgtttgtgcaatatt 7768766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 25124874 - 25124813
Alignment:
Q  214 tttatcgttttagtagcgactcaggttcaaatattaataagttttagcaattaacaaatttt 275  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||||| | ||||| ||||    
T  25124874 tttatcgttttaatagcgactcaagttcaaataataataagttttagcagtaaacaattttt 25124813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 3711079 - 3711120
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  3711079 attttgataaagatttataatgtttgtgcaatattcattaat 3711120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 11866337 - 11866296
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  11866337 attttgataaagatttataatgtttgtgcaatattcattaat 11866296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 24278975 - 24279016
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  24278975 attttgataaagatttataatgtttgtgcaatattcattaat 24279016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 35357730 - 35357689
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||    
T  35357730 attttgataaagatttataatgtttgtacaatattcattaat 35357689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 39169761 - 39169425
Alignment:
Q  1 acatgatgtactatgagattcctaattgactactttctcttcatcaaagatttagagctccatatgtttggtcttaaatatgaagcactgcatt------ 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||          
T  39169761 acatgatgtactatgagattcctaattgactactttctcttcatcaaagatttagagcttcatatgtttggtcctaaatatgaagcactgcattatgtaa 39169662  T
Q  95 ---atctaatagggatatgatacttaggttgtggcaataagtgataggagtttggaaattcacttttaaactcagtaatcaaggagcgcacccacaaaat 191  Q
       || |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||  |||    
T  39169661 atcatgtaatagggatataatacttaggttgtcgcaataagtgataggagtttggaaattcacttttaaactcagtaatcaaggacgacacccac--aat 39169564  T
Q  192 ttctgcaagcagtgctcaca------------------agtttatcgttttagtagcgactcaggttcaaatattaataagttttagcaattaacaaatt 273  Q
    ||||||||||||| || |||                  | ||||| | ||||| |||||||||| |||||||| ||||||||||||||||| ||||||||    
T  39169563 ttctgcaagcagtactgacaatgttgatgtaatttgacaatttattgctttagcagcgactcagtttcaaatactaataagttttagcaataaacaaatt 39169464  T
Q  274 ttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39169463 ttgataaatatttataatgtttgtgcaatattcagtaat 39169425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 18037350 - 18037309
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  18037350 attttgataaagatttataatgtttgtgcaatattcattaat 18037309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 19365869 - 19365902
Alignment:
Q  273 tttgataaatatttataatgtttgtgcaatattc 306  Q
    ||||||||||||||||||||||||||||||||||    
T  19365869 tttgataaatatttataatgtttgtgcaatattc 19365902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 37464501 - 37464542
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||    
T  37464501 attttgataaagatttataatttttgtgcaatattcattaat 37464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 48183503 - 48183440
Alignment:
Q  212 agtttatcgttttagtagcgactcaggttcaaatattaataagttttagcaattaacaaatttt 275  Q
    |||||| | |||||||||||| ||| ||||||||| ||||||||||||||||| ||||| ||||    
T  48183503 agtttaacattttagtagcgattcaagttcaaatactaataagttttagcaataaacaattttt 48183440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 306
Target Start/End: Complemental strand, 42298926 - 42298892
Alignment:
Q  272 ttttgataaatatttataatgtttgtgcaatattc 306  Q
    |||||||||||||||||||||||||||||||||||    
T  42298926 ttttgataaatatttataatgtttgtgcaatattc 42298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 19033766 - 19033725
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  19033766 attttgataaaaatttataatgtttgtgcaatattcattaat 19033725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 20720870 - 20720911
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  20720870 attttgataaaaatttataatgtttgtgcaatattcattaat 20720911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 20765532 - 20765573
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  20765532 attttgataaagatttataatgtttgtgcaatattcattaat 20765573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 29491110 - 29491151
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  29491110 attttgataaagatttataatgtttgtgcaatattcattaat 29491151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 33230072 - 33230031
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  33230072 attttgataaagatttataatgtttgtgcaatattcattaat 33230031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 34282214 - 34282173
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  34282214 attttgataaagatttataatgtttgtgcaatattcattaat 34282173  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 20266744 - 20266790
Alignment:
Q  213 gtttatcgttttagtagcgactcaggttcaaatattaataagtttta 259  Q
    |||||||||||||||||||| ||| ||||||||| |||||| |||||    
T  20266744 gtttatcgttttagtagcgattcaagttcaaatactaataaatttta 20266790  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 23476705 - 23476673
Alignment:
Q  273 tttgataaatatttataatgtttgtgcaatatt 305  Q
    |||||||||||||| ||||||||||||||||||    
T  23476705 tttgataaatatttctaatgtttgtgcaatatt 23476673  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 20663038 - 20662997
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  20663038 attttgataaagatttataatgtttgtgcaatattcattaat 20662997  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 30548401 - 30548360
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  30548401 attttgataaagatttataatgtttgtgcaatattcattaat 30548360  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 44213155 - 44213114
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  44213155 attttgataaagatttataatgtttgtgcaatattcattaat 44213114  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 12661077 - 12661036
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    |||| ||||||||||| |||||||||||||||||||| ||||    
T  12661077 atttggataaatatttctaatgtttgtgcaatattcattaat 12661036  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 250045 - 250086
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  250045 attttgataaagatttataatgtttgtgcaatattcattaat 250086  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 12579897 - 12579856
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  12579897 attttgataaagatttataatgtttgtgcaatattcattaat 12579856  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 33979106 - 33979147
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  33979106 attttgataaagatttataatgtttgtgcaatattcattaat 33979147  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 3052125 - 3052084
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||    
T  3052125 attttgataaagatttataatatttgtgcaatattcattaat 3052084  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 918819 - 918860
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  918819 attttgataaagatttataatgtttgtgcaatattcattaat 918860  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 44072827 - 44072786
Alignment:
Q  271 attttgataaatatttataatgtttgtgcaatattcagtaat 312  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  44072827 attttgataaagatttataatgtttgtgcaatattcattaat 44072786  T

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Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 306
Target Start/End: Complemental strand, 22759174 - 22759140
Alignment:
Q  272 ttttgataaatatttataatgtttgtgcaatattc 306  Q
    ||||||||||||||| |||||||||||||||||||    
T  22759174 ttttgataaatatttctaatgtttgtgcaatattc 22759140  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 81010 - 81043
Alignment:
Q  273 tttgataaatatttataatgtttgtgcaatattc 306  Q
    |||||||||||||||||||||| |||||||||||    
T  81010 tttgataaatatttataatgttcgtgcaatattc 81043  T

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