View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5021_low_1 (Length: 347)

Name: NF5021_low_1
Description: NF5021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5021_low_1
NF5021_low_1
[»] chr6 (27 HSPs)
chr6 (184-325)||(9978939-9979080)
chr6 (184-325)||(9735927-9736068)
chr6 (195-325)||(1222065-1222195)
chr6 (189-325)||(24447470-24447606)
chr6 (184-323)||(4109726-4109865)
chr6 (184-325)||(6966468-6966609)
chr6 (184-325)||(15044058-15044199)
chr6 (220-325)||(18320433-18320538)
chr6 (184-325)||(35159791-35159932)
chr6 (184-321)||(4896196-4896332)
chr6 (184-325)||(4108980-4109135)
chr6 (184-325)||(33320396-33320551)
chr6 (184-325)||(4896806-4896961)
chr6 (184-323)||(35159113-35159266)
chr6 (184-285)||(14832708-14832809)
chr6 (184-285)||(24446188-24446289)
chr6 (184-267)||(21059285-21059368)
chr6 (184-285)||(1220781-1220882)
chr6 (184-267)||(21078526-21078609)
chr6 (184-262)||(33319846-33319924)
chr6 (171-285)||(4621409-4621518)
chr6 (184-238)||(21055513-21055567)
chr6 (269-323)||(31426227-31426281)
chr6 (289-323)||(1220900-1220934)
chr6 (289-323)||(24446307-24446341)
chr6 (282-321)||(4621360-4621399)
chr6 (289-321)||(14832827-14832859)
[»] chr5 (60 HSPs)
chr5 (184-325)||(33704986-33705127)
chr5 (184-325)||(25695768-25695909)
chr5 (189-325)||(34719133-34719269)
chr5 (189-325)||(41692817-41692953)
chr5 (184-325)||(36885011-36885152)
chr5 (184-325)||(42976251-42976392)
chr5 (184-324)||(43136506-43136645)
chr5 (186-325)||(17636916-17637055)
chr5 (203-325)||(30181100-30181222)
chr5 (184-318)||(42975627-42975761)
chr5 (184-321)||(34725494-34725631)
chr5 (184-325)||(39915362-39915503)
chr5 (184-318)||(752307-752440)
chr5 (171-321)||(38937329-38937474)
chr5 (184-318)||(3086659-3086787)
chr5 (184-285)||(2181770-2181871)
chr5 (184-324)||(12419411-12419564)
chr5 (184-287)||(27440849-27440952)
chr5 (184-278)||(2182509-2182603)
chr5 (184-325)||(6304770-6304925)
chr5 (184-325)||(26601514-26601669)
chr5 (184-275)||(43137934-43138025)
chr5 (184-285)||(17637711-17637812)
chr5 (184-325)||(30180350-30180505)
chr5 (184-325)||(42976873-42977028)
chr5 (184-275)||(753840-753931)
chr5 (184-275)||(33705669-33705760)
chr5 (195-285)||(753087-753177)
chr5 (196-325)||(16679796-16679919)
chr5 (195-285)||(43137292-43137382)
chr5 (184-285)||(34726281-34726382)
chr5 (184-325)||(3087386-3087541)
chr5 (184-285)||(34717851-34717952)
chr5 (195-325)||(36885746-36885890)
chr5 (184-285)||(41691535-41691636)
chr5 (198-325)||(16679639-16679760)
chr5 (195-285)||(6304080-6304170)
chr5 (184-285)||(25696439-25696540)
chr5 (184-265)||(30755410-30755491)
chr5 (253-325)||(16683414-16683486)
chr5 (269-325)||(34726227-34726283)
chr5 (269-323)||(25696387-25696441)
chr5 (269-325)||(753033-753089)
chr5 (269-325)||(41289984-41290040)
chr5 (269-325)||(43137238-43137294)
chr5 (291-325)||(2182630-2182664)
chr5 (271-321)||(33705609-33705659)
chr5 (289-323)||(34717970-34718004)
chr5 (289-323)||(41289875-41289909)
chr5 (269-322)||(3890240-3890293)
chr5 (289-325)||(753776-753812)
chr5 (269-321)||(3890356-3890408)
chr5 (205-288)||(16683530-16683607)
chr5 (41-73)||(39914985-39915017)
chr5 (41-73)||(39915083-39915115)
chr5 (289-325)||(43137870-43137906)
chr5 (290-325)||(2181890-2181925)
chr5 (289-323)||(41691654-41691688)
chr5 (269-321)||(3890129-3890181)
chr5 (289-325)||(16685462-16685498)
[»] chr3 (46 HSPs)
chr3 (186-323)||(19893411-19893548)
chr3 (184-325)||(39094221-39094362)
chr3 (184-325)||(52842856-52842997)
chr3 (184-325)||(48519886-48520027)
chr3 (198-325)||(28979837-28979964)
chr3 (184-325)||(55290627-55290766)
chr3 (184-324)||(26776667-26776807)
chr3 (184-321)||(19361594-19361731)
chr3 (184-316)||(26101643-26101775)
chr3 (184-322)||(8396435-8396573)
chr3 (184-318)||(29528989-29529123)
chr3 (195-320)||(19360970-19361095)
chr3 (184-325)||(4137633-4137774)
chr3 (184-322)||(9373449-9373581)
chr3 (184-325)||(9373953-9374088)
chr3 (184-325)||(51656420-51656555)
chr3 (184-321)||(53802033-53802170)
chr3 (198-321)||(35860688-35860810)
chr3 (223-325)||(26101009-26101111)
chr3 (171-325)||(9373743-9373892)
chr3 (184-323)||(40821948-40822101)
chr3 (184-318)||(53521729-53521857)
chr3 (184-277)||(22521923-22522016)
chr3 (189-285)||(4138636-4138732)
chr3 (184-303)||(46489283-46489403)
chr3 (184-322)||(35855820-35855972)
chr3 (184-322)||(53801512-53801664)
chr3 (184-325)||(8527030-8527185)
chr3 (184-277)||(19368358-19368451)
chr3 (184-285)||(29529769-29529870)
chr3 (184-285)||(39093595-39093696)
chr3 (205-285)||(55293679-55293759)
chr3 (184-251)||(19367744-19367811)
chr3 (184-255)||(36006479-36006550)
chr3 (197-325)||(9373136-9373272)
chr3 (269-325)||(29529715-29529771)
chr3 (269-325)||(55293625-55293681)
chr3 (269-322)||(14555645-14555698)
chr3 (266-323)||(16036429-16036486)
chr3 (266-318)||(16040663-16040715)
chr3 (253-304)||(9374143-9374196)
chr3 (266-323)||(16047013-16047070)
chr3 (296-324)||(9374197-9374225)
chr3 (269-321)||(36006572-36006623)
chr3 (41-73)||(46489002-46489034)
chr3 (275-323)||(49453788-49453836)
[»] chr4 (80 HSPs)
chr4 (184-325)||(36742030-36742171)
chr4 (184-325)||(39713726-39713867)
chr4 (195-322)||(37061777-37061904)
chr4 (184-325)||(3758950-3759091)
chr4 (184-325)||(13172619-13172760)
chr4 (184-321)||(37061566-37061703)
chr4 (184-325)||(39405565-39405706)
chr4 (184-325)||(46106092-46106233)
chr4 (184-324)||(17741333-17741473)
chr4 (184-320)||(24549093-24549229)
chr4 (189-325)||(52802609-52802745)
chr4 (184-325)||(20590673-20590814)
chr4 (184-324)||(5755268-5755408)
chr4 (184-324)||(8988872-8989011)
chr4 (184-324)||(37351772-37351911)
chr4 (184-324)||(37356671-37356810)
chr4 (184-321)||(12680869-12681006)
chr4 (184-324)||(50043008-50043147)
chr4 (189-324)||(8964510-8964644)
chr4 (190-321)||(42349574-42349705)
chr4 (184-321)||(29712990-29713127)
chr4 (184-325)||(50118298-50118439)
chr4 (184-324)||(29713496-29713635)
chr4 (184-321)||(2117860-2117997)
chr4 (184-321)||(47555660-47555796)
chr4 (171-321)||(26602628-26602773)
chr4 (184-325)||(43022443-43022585)
chr4 (184-321)||(54866802-54866933)
chr4 (186-324)||(46419594-46419745)
chr4 (184-325)||(20589989-20590144)
chr4 (184-325)||(46105192-46105347)
chr4 (195-318)||(9887522-9887644)
chr4 (184-278)||(8531883-8531977)
chr4 (184-285)||(42348269-42348370)
chr4 (184-285)||(42348549-42348652)
chr4 (184-275)||(8987492-8987583)
chr4 (184-324)||(24944365-24944519)
chr4 (184-275)||(37350392-37350483)
chr4 (184-324)||(47556274-47556428)
chr4 (184-323)||(52801285-52801438)
chr4 (184-285)||(24548340-24548441)
chr4 (195-325)||(24944884-24945028)
chr4 (184-273)||(50118988-50119077)
chr4 (184-324)||(2117117-2117271)
chr4 (184-275)||(9888307-9888398)
chr4 (184-324)||(24947601-24947755)
chr4 (195-285)||(8988135-8988225)
chr4 (195-285)||(37351035-37351125)
chr4 (184-325)||(43023689-43023836)
chr4 (184-275)||(3758305-3758396)
chr4 (184-321)||(26603397-26603542)
chr4 (195-325)||(43022964-43023101)
chr4 (184-274)||(49355354-49355443)
chr4 (184-285)||(39404876-39404976)
chr4 (209-275)||(16904665-16904731)
chr4 (184-285)||(39714445-39714545)
chr4 (264-323)||(42348425-42348484)
chr4 (264-325)||(42348139-42348200)
chr4 (270-325)||(48808270-48808325)
chr4 (205-299)||(49355469-49355557)
chr4 (289-323)||(39714393-39714427)
chr4 (269-325)||(3758404-3758460)
chr4 (289-321)||(8120461-8120493)
chr4 (281-325)||(8987603-8987647)
chr4 (289-325)||(9888243-9888279)
chr4 (281-325)||(37350503-37350547)
chr4 (41-73)||(48808585-48808617)
chr4 (281-321)||(49355293-49355333)
chr4 (290-325)||(16904760-16904795)
chr4 (290-325)||(30527818-30527853)
chr4 (289-324)||(39404823-39404858)
chr4 (275-325)||(1325590-1325640)
chr4 (275-325)||(24527921-24527971)
chr4 (275-321)||(24528013-24528059)
chr4 (289-325)||(8988243-8988279)
chr4 (289-325)||(24548459-24548495)
chr4 (289-325)||(37351143-37351179)
chr4 (41-73)||(46419957-46419989)
chr4 (41-73)||(46420055-46420087)
chr4 (289-325)||(50118922-50118958)
[»] chr7 (51 HSPs)
chr7 (184-320)||(7855199-7855335)
chr7 (189-325)||(17172569-17172705)
chr7 (184-325)||(9151089-9151230)
chr7 (184-325)||(27733184-27733325)
chr7 (184-325)||(4850118-4850259)
chr7 (184-325)||(31897044-31897185)
chr7 (184-325)||(34872748-34872889)
chr7 (184-325)||(35155719-35155860)
chr7 (189-325)||(48527642-48527778)
chr7 (203-325)||(39648212-39648334)
chr7 (184-325)||(44806248-44806389)
chr7 (184-324)||(29468889-29469028)
chr7 (184-324)||(49144266-49144406)
chr7 (184-321)||(690958-691095)
chr7 (184-320)||(34873490-34873626)
chr7 (184-318)||(24682529-24682662)
chr7 (184-325)||(21669462-21669603)
chr7 (184-325)||(39277920-39278061)
chr7 (205-318)||(27733921-27734034)
chr7 (184-285)||(4849374-4849475)
chr7 (184-285)||(9150567-9150668)
chr7 (184-325)||(7855935-7856090)
chr7 (184-275)||(49145190-49145281)
chr7 (184-277)||(11835253-11835346)
chr7 (184-275)||(24684048-24684139)
chr7 (184-324)||(29468369-29468523)
chr7 (195-285)||(24683295-24683385)
chr7 (184-285)||(17171287-17171388)
chr7 (184-285)||(35156397-35156498)
chr7 (184-285)||(44805500-44805601)
chr7 (184-325)||(39648818-39648973)
chr7 (184-323)||(31897661-31897814)
chr7 (184-309)||(34989411-34989530)
chr7 (220-277)||(21598246-21598303)
chr7 (184-275)||(33637682-33637773)
chr7 (164-255)||(35100977-35101069)
chr7 (269-325)||(49145123-49145179)
chr7 (269-325)||(35156343-35156399)
chr7 (269-321)||(49144999-49145051)
chr7 (1-46)||(34989145-34989190)
chr7 (269-325)||(33637618-33637674)
chr7 (291-325)||(4849495-4849529)
chr7 (289-323)||(17171406-17171440)
chr7 (289-325)||(24683984-24684020)
chr7 (41-73)||(29321995-29322027)
chr7 (289-325)||(44805619-44805655)
chr7 (204-255)||(35074830-35074881)
chr7 (1-46)||(35075104-35075149)
chr7 (246-275)||(49145059-49145088)
chr7 (41-73)||(29322092-29322124)
chr7 (279-323)||(35074750-35074793)
[»] chr2 (50 HSPs)
chr2 (189-325)||(4289258-4289394)
chr2 (184-325)||(10875372-10875513)
chr2 (184-324)||(18090844-18090984)
chr2 (184-320)||(42782344-42782480)
chr2 (184-318)||(19487947-19488081)
chr2 (184-319)||(6931577-6931712)
chr2 (184-322)||(17838145-17838282)
chr2 (184-320)||(10874634-10874770)
chr2 (211-325)||(9542860-9542974)
chr2 (184-300)||(15783430-15783546)
chr2 (184-325)||(28609602-28609757)
chr2 (184-321)||(44940701-44940852)
chr2 (184-275)||(6931055-6931146)
chr2 (184-285)||(18091618-18091719)
chr2 (184-285)||(25235197-25235298)
chr2 (184-285)||(32676551-32676652)
chr2 (184-285)||(42781597-42781698)
chr2 (184-275)||(1513139-1513231)
chr2 (184-325)||(1513723-1513878)
chr2 (184-285)||(4290573-4290674)
chr2 (184-325)||(28608871-28609026)
chr2 (184-285)||(9543540-9543641)
chr2 (184-325)||(19487191-19487346)
chr2 (184-275)||(19485215-19485306)
chr2 (184-279)||(32676034-32676128)
chr2 (183-236)||(25235403-25235456)
chr2 (269-325)||(1501663-1501719)
chr2 (269-324)||(19485152-19485207)
chr2 (269-323)||(25235145-25235199)
chr2 (221-301)||(25235322-25235396)
chr2 (269-325)||(18091564-18091620)
chr2 (269-325)||(32676497-32676553)
chr2 (270-325)||(1501570-1501625)
chr2 (290-325)||(9543486-9543521)
chr2 (255-325)||(692907-692977)
chr2 (289-323)||(4290521-4290555)
chr2 (220-285)||(23456394-23456453)
chr2 (41-73)||(8909629-8909661)
chr2 (41-73)||(15783154-15783186)
chr2 (269-321)||(25234722-25234774)
chr2 (269-325)||(25234823-25234879)
chr2 (269-321)||(25234939-25234991)
chr2 (290-325)||(6931175-6931210)
chr2 (269-323)||(25234510-25234564)
chr2 (266-323)||(1378678-1378735)
chr2 (41-70)||(8909500-8909529)
chr2 (292-321)||(25235036-25235065)
chr2 (289-318)||(32675981-32676010)
chr2 (41-73)||(1379500-1379532)
chr2 (289-325)||(42781716-42781752)
[»] chr1 (58 HSPs)
chr1 (189-325)||(4893643-4893779)
chr1 (189-325)||(29184708-29184844)
chr1 (184-325)||(38896485-38896626)
chr1 (184-324)||(1828109-1828248)
chr1 (189-325)||(19320651-19320787)
chr1 (195-325)||(33363253-33363383)
chr1 (184-325)||(5427253-5427394)
chr1 (184-325)||(47137528-47137669)
chr1 (184-320)||(46623612-46623748)
chr1 (184-324)||(1375653-1375792)
chr1 (184-323)||(50563142-50563281)
chr1 (195-325)||(47136810-47136940)
chr1 (184-325)||(46624337-46624478)
chr1 (184-311)||(33373538-33373665)
chr1 (198-324)||(22194699-22194824)
chr1 (184-321)||(5427985-5428122)
chr1 (184-325)||(38895745-38895886)
chr1 (184-325)||(52311893-52312034)
chr1 (184-324)||(33074463-33074602)
chr1 (184-323)||(51964696-51964834)
chr1 (184-318)||(28572817-28572950)
chr1 (184-321)||(21056124-21056254)
chr1 (184-285)||(1827371-1827472)
chr1 (184-319)||(20130618-20130746)
chr1 (170-285)||(28950618-28950734)
chr1 (184-285)||(16301209-16301310)
chr1 (184-325)||(19321270-19321425)
chr1 (184-325)||(49586833-49586971)
chr1 (184-325)||(33074967-33075122)
chr1 (184-275)||(28571326-28571417)
chr1 (195-285)||(28572080-28572170)
chr1 (184-285)||(4892361-4892462)
chr1 (184-285)||(29186025-29186126)
chr1 (184-324)||(22198217-22198371)
chr1 (184-277)||(16301798-16301891)
chr1 (184-284)||(33361964-33362064)
chr1 (184-325)||(50562325-50562480)
chr1 (253-321)||(35599365-35599433)
chr1 (220-321)||(35598774-35598869)
chr1 (249-318)||(24289453-24289522)
chr1 (269-325)||(52311204-52311260)
chr1 (184-285)||(8256533-8256628)
chr1 (187-236)||(33375357-33375406)
chr1 (184-244)||(52311111-52311171)
chr1 (289-323)||(4892480-4892514)
chr1 (289-323)||(29185973-29186007)
chr1 (289-323)||(33362083-33362117)
chr1 (41-73)||(20089318-20089350)
chr1 (281-325)||(28571437-28571481)
chr1 (284-324)||(35593663-35593703)
chr1 (289-324)||(1827490-1827525)
chr1 (282-318)||(8256487-8256523)
chr1 (41-73)||(9754400-9754432)
chr1 (289-321)||(16301328-16301360)
chr1 (281-325)||(16301909-16301953)
chr1 (41-69)||(20130854-20130882)
chr1 (289-325)||(28572188-28572224)
chr1 (253-285)||(35598308-35598340)
[»] scaffold0051 (1 HSPs)
scaffold0051 (184-323)||(55229-55368)
[»] scaffold0230 (1 HSPs)
scaffold0230 (195-325)||(26257-26387)
[»] scaffold0069 (1 HSPs)
scaffold0069 (195-325)||(14329-14459)
[»] chr8 (72 HSPs)
chr8 (195-325)||(18375788-18375918)
chr8 (184-325)||(9473793-9473934)
chr8 (184-318)||(25361185-25361319)
chr8 (184-325)||(24055510-24055651)
chr8 (184-325)||(25618730-25618871)
chr8 (184-325)||(36778150-36778291)
chr8 (184-325)||(40586672-40586813)
chr8 (184-324)||(8762684-8762823)
chr8 (184-322)||(44380946-44381084)
chr8 (184-324)||(1944859-1944998)
chr8 (184-324)||(25834229-25834368)
chr8 (184-320)||(42244571-42244707)
chr8 (184-321)||(7390988-7391125)
chr8 (184-325)||(25345664-25345805)
chr8 (181-318)||(34894077-34894214)
chr8 (184-325)||(41158317-41158455)
chr8 (184-321)||(4464589-4464726)
chr8 (184-324)||(8160651-8160788)
chr8 (184-325)||(41532000-41532140)
chr8 (184-285)||(41157581-41157682)
chr8 (184-325)||(4465315-4465470)
chr8 (184-325)||(7390240-7390395)
chr8 (184-275)||(1943369-1943460)
chr8 (184-275)||(8162169-8162260)
chr8 (184-275)||(8761304-8761395)
chr8 (184-275)||(25835657-25835748)
chr8 (195-321)||(38295306-38295426)
chr8 (184-285)||(41978515-41978616)
chr8 (184-285)||(44381684-44381785)
chr8 (184-325)||(36777511-36777666)
chr8 (184-275)||(32846132-32846223)
chr8 (195-285)||(1944123-1944213)
chr8 (195-285)||(8161416-8161506)
chr8 (195-285)||(8761947-8762037)
chr8 (195-285)||(25835015-25835105)
chr8 (184-285)||(12761160-12761261)
chr8 (184-277)||(34894267-34894359)
chr8 (184-275)||(32844754-32844846)
chr8 (184-275)||(41532741-41532832)
chr8 (195-285)||(32845510-32845600)
chr8 (189-285)||(25619679-25619774)
chr8 (184-324)||(32846880-32847006)
chr8 (253-325)||(37588351-37588423)
chr8 (184-275)||(9473155-9473246)
chr8 (264-325)||(34894565-34894626)
chr8 (204-321)||(34894770-34894895)
chr8 (204-261)||(34894679-34894736)
chr8 (195-236)||(44428940-44428981)
chr8 (269-325)||(8161362-8161418)
chr8 (269-325)||(25834961-25835017)
chr8 (269-321)||(41532681-41532733)
chr8 (269-321)||(44381634-44381686)
chr8 (184-239)||(25346612-25346667)
chr8 (259-321)||(37588080-37588142)
chr8 (281-325)||(1943480-1943524)
chr8 (289-325)||(8162105-8162141)
chr8 (281-325)||(8761415-8761459)
chr8 (269-321)||(25619629-25619681)
chr8 (289-325)||(25835593-25835629)
chr8 (281-325)||(32844866-32844910)
chr8 (281-325)||(32846243-32846287)
chr8 (41-73)||(33931040-33931072)
chr8 (269-313)||(44428469-44428513)
chr8 (253-321)||(44428811-44428879)
chr8 (269-324)||(37588181-37588236)
chr8 (184-237)||(44428529-44428582)
chr8 (289-325)||(1944231-1944267)
chr8 (289-325)||(8762055-8762091)
chr8 (289-325)||(12761279-12761315)
chr8 (41-73)||(18492766-18492798)
chr8 (41-73)||(18493017-18493049)
chr8 (289-325)||(32845618-32845654)
[»] scaffold0079 (3 HSPs)
scaffold0079 (184-325)||(8821-8962)
scaffold0079 (184-275)||(9622-9713)
scaffold0079 (269-319)||(9564-9614)
[»] scaffold0115 (3 HSPs)
scaffold0115 (184-324)||(14682-14822)
scaffold0115 (186-324)||(3683-3821)
scaffold0115 (186-324)||(11423-11561)
[»] scaffold0057 (3 HSPs)
scaffold0057 (189-321)||(17636-17768)
scaffold0057 (184-285)||(18305-18406)
scaffold0057 (289-323)||(18253-18287)
[»] scaffold0484 (3 HSPs)
scaffold0484 (184-318)||(8413-8547)
scaffold0484 (184-275)||(9088-9179)
scaffold0484 (269-321)||(9024-9076)
[»] scaffold0381 (3 HSPs)
scaffold0381 (195-318)||(10900-11022)
scaffold0381 (184-275)||(10146-10237)
scaffold0381 (281-325)||(10257-10301)
[»] scaffold0032 (3 HSPs)
scaffold0032 (207-325)||(3075-3193)
scaffold0032 (184-322)||(3802-3954)
scaffold0032 (184-252)||(10335-10403)
[»] scaffold0009 (5 HSPs)
scaffold0009 (184-325)||(139259-139386)
scaffold0009 (184-285)||(232234-232335)
scaffold0009 (184-279)||(232867-232963)
scaffold0009 (281-322)||(232979-233020)
scaffold0009 (292-325)||(232356-232389)
[»] scaffold0368 (1 HSPs)
scaffold0368 (195-321)||(670-790)
[»] scaffold2127 (1 HSPs)
scaffold2127 (195-325)||(638-782)
[»] scaffold0012 (1 HSPs)
scaffold0012 (215-317)||(200881-200977)
[»] scaffold0089 (3 HSPs)
scaffold0089 (279-325)||(20810-20856)
scaffold0089 (279-325)||(22477-22523)
scaffold0089 (275-324)||(33-82)
[»] scaffold0180 (1 HSPs)
scaffold0180 (275-324)||(4317-4366)


Alignment Details
Target: chr6 (Bit Score: 114; Significance: 9e-58; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 9979080 - 9978939
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  9979080 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 9978981  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  9978980 atacagtaaaattaagcaaagaagttaggttaaatctagggc 9978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 9736068 - 9735927
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  9736068 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 9735969  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  9735968 atatagtaaaattaagcaaagaagttaggttaaatcttgggc 9735927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 1222065 - 1222195
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  1222065 aaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatactgtaaaa 1222164  T
Q  295 ttaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||    
T  1222165 ttaagcaaagaagttaggttaaatctagggc 1222195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 24447470 - 24447606
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||| |    
T  24447470 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaatgttaacattttgattaaattaaatagggttaatact 24447569  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| |||||||||||||||||||||||||    
T  24447570 gtaaaattaagtaaagaagttaggttaaatctagggc 24447606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 4109726 - 4109865
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  4109726 atttgtttagtaaaattaaggagaaaaattatgtgtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 4109825  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||  ||||| |||||||| ||||||||||||||||||||    
T  4109826 atacagtaaagttaagcaatgaagttaggttaaatctagg 4109865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 6966609 - 6966468
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||    
T  6966609 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaactttaacattttgattaaattaaatggggtta 6966510  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||| ||||||||||| |||||||||||||||||||||    
T  6966509 atacagtacaattaagcaaaaaagttaggttaaatctagggc 6966468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 15044199 - 15044058
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||| | ||||||||| |||||||| |||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||    
T  15044199 atttgtttggtaaaattaaggagaaaaatcaggagctatttgtttattttgatttctctaacaattaacgttaacattttgattaaattaaatagggtta 15044100  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||||||||||||||||||||||||| |||||    
T  15044099 atacagtaaaattaagcaaagaagttaggttaaatccagggc 15044058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 18320433 - 18320538
Alignment:
Q  220 gatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatc 319  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  18320433 gatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatactgtaaaattaagcaaagaagttaggttaaatc 18320532  T
Q  320 tagggc 325  Q
    ||||||    
T  18320533 tagggc 18320538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 35159791 - 35159932
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||     
T  35159791 atttgtttagtaaaattaaggagaaaaattaggagcgatttttttattttgatttccctaacaattaacgttaacattttcattaaattaaatagggttg 35159890  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||| |||| |||||||||||||||||| ||||||    
T  35159891 atacagtaaaactaagtaaagaagttaggttaaatttagggc 35159932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 4896332 - 4896196
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||  ||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  4896332 atttgtttaataaaattaaggagaaaaattaggagcgatctgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaataggggta 4896234  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  ||||||||||| |||||||||||||||||||||    
T  4896233 atacagtaaaattaagtaaagaagttaggttaaatcta 4896196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 4108980 - 4109135
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||              |    
T  4108980 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaacagggtta 4109079  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  4109080 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 4109135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 33320551 - 33320396
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||                
T  33320551 atttgtttagtaaaattaaagagaaaaattaggagtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagagtta 33320452  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
      |||||||| | ||||  |||||||||||||||||||||||||||||||||||||    
T  33320451 attaaatagggtcaatacagtaaaattaagcaaagaagttaggttaaatctagggc 33320396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 4896961 - 4896806
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||                
T  4896961 atttgtttagtaaaattaaagtgaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 4896862  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
      |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||    
T  4896861 attaaatagggttaatatagtaaaattaagcaaagaagttaggttacatctagggc 4896806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 35159113 - 35159266
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taa 269  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||              |||    
T  35159113 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaaaaattaacgttaacattttgattaaattaaacagagtaa 35159212  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  35159213 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagg 35159266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 14832708 - 14832809
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||||||||||||| ||| |||    
T  14832708 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttaatttcccaaacaattaacgttaacattttgattaaattaaacagggtta 14832807  T
Q  284 at 285  Q
    ||    
T  14832808 at 14832809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 24446188 - 24446289
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  24446188 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 24446287  T
Q  284 at 285  Q
    ||    
T  24446288 at 24446289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 21059285 - 21059368
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatt 267  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  21059285 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccctaacagtttacattaacattttgatt 21059368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 1220781 - 1220882
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  1220781 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttaatttccctaacaattaacgttaacattttatttaaattaaacaggatta 1220880  T
Q  284 at 285  Q
    ||    
T  1220881 at 1220882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 21078526 - 21078609
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatt 267  Q
    |||||||| | ||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  21078526 atttgtttggtaaagttaaggagaaaaattaggagcgatttgtttattttgatttccttaacaatttacattaacattttgatt 21078609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 33319924 - 33319846
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattt 262  Q
    |||||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  33319924 atttgtttagtaaaattaaggagaaaaattatgagcgatttatttattttgatttccctaacaattaacgttaacattt 33319846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 4621518 - 4621409
Alignment:
Q  171 ataagaataggag-atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaa 269  Q
    ||||||||| ||| |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||| |||||      ||||| |||||||||||    
T  4621518 ataagaataagagtatttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccataaca------attaatattttgattaa 4621425  T
Q  270 attaaataggattaat 285  Q
    |||||||||| |||||    
T  4621424 attaaatagggttaat 4621409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 21055513 - 21055567
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgattt 238  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  21055513 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgattt 21055567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 31426227 - 31426281
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||    
T  31426227 aattaaatatgattaatatagtaaaattaagcaaagaagttatgttaaatttagg 31426281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 1220900 - 1220934
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  1220900 gtaaaattaagcaaagaagttaggttaaatctagg 1220934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 24446307 - 24446341
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  24446307 gtaaaattaagcaaagaagttaggttaaatctagg 24446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 4621399 - 4621360
Alignment:
Q  282 taatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  4621399 taatatagtaaaattaagcaaagaagctaggttaaatcta 4621360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 14832827 - 14832859
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||||||| |||||||||||||||||    
T  14832827 gtaaaattaagcaaaaaagttaggttaaatcta 14832859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 9e-58; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 33705127 - 33704986
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  33705127 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 33705028  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  33705027 atacagtaaaattaagcaaagaagttaggttaaatctagggc 33704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 25695909 - 25695768
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  25695909 atttttttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 25695810  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  25695809 atactgtaaaattaagcaaagaagttaggttaaatctagggc 25695768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 34719133 - 34719269
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |    
T  34719133 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatact 34719232  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  34719233 gtaaaattaagcaaagaagttaggttaaatctagggc 34719269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 41692817 - 41692953
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |    
T  41692817 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatact 41692916  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  41692917 gtaaaattaagcaaagaagttaggttaaatctagggc 41692953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 36885152 - 36885011
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  36885152 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaaccttaacattttgattaaattaaatagggtta 36885053  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  36885052 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 36885011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 42976392 - 42976251
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  42976392 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 42976293  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||| ||||||||    
T  42976292 atacagtaaaattaagcaaagaagttaggttaattctagggc 42976251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 43136645 - 43136506
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  43136645 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 43136547  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  43136546 atacagtaaaattaagcaaataagttaggttaaatctaggg 43136506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 186 - 325
Target Start/End: Complemental strand, 17637055 - 17636916
Alignment:
Q  186 ttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    |||||||| ||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  17637055 ttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttcccgaacaattaacattaacattttgattaaattaaatagggttaat 17636956  T
Q  286 attgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |  |||||||||||||||||||||| ||||||||| ||||    
T  17636955 acagtaaaattaagcaaagaagttatgttaaatcttgggc 17636916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 203 - 325
Target Start/End: Original strand, 30181100 - 30181222
Alignment:
Q  203 gtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaa 302  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  30181100 gtagtaaaattaggagcgatttgtttaatttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatactgtaaaattaagcaa 30181199  T
Q  303 agaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||    
T  30181200 agaagttaggttaaatctagggc 30181222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 42975761 - 42975627
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  42975761 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 42975662  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||   |||||||||||||||||||||||||||||    
T  42975661 atacaataaaattaagcaaagaagttaggttaaat 42975627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 34725631 - 34725494
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    ||||| |||| ||||||||| |||||||||| | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  34725631 atttgcttagtaaaattaaggagaaaaattatgtgcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 34725532  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  |||||||||||||||||||||||||||||||||    
T  34725531 atacagtaaaattaagcaaagaagttaggttaaatcta 34725494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 39915362 - 39915503
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    ||||| |||| ||||||||| | |||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||    
T  39915362 atttggttagtaaaattaagaaaaaaaattaggagcgatttgttcattttgatttccctaccaattaacattagcattttgattaaattaaatagggtta 39915461  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| ||||| ||||||||| |||||| ||||||||||||||    
T  39915462 atatagtaaatttaagcaaataagttatgttaaatctagggc 39915503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 752440 - 752307
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  752440 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaactaacgttaacattttgattaaattaaatagggtta 752342  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    ||   ||||||||||||||| ||||||||||||||    
T  752341 atgcagtaaaattaagcaaataagttaggttaaat 752307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 171 - 321
Target Start/End: Original strand, 38937329 - 38937474
Alignment:
Q  171 ataagaataggag-atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaa 269  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||| | ||||||||||||| ||||||| |||||||||      |||||||||||||    
T  38937329 ataagaataggaggatttgtttagtaaaattaaggagaaaaattaggggcgatttgtttatttcgatttccataacaatta------acattttgattaa 38937422  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  38937423 attaaatagggttaatatagtaaaattaagtaaagaagttaggttaaatcta 38937474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 3086787 - 3086659
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||      |||||||||||||||||||||| |||    
T  3086787 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaa------cattttgattaaattaaatagggtta 3086694  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||  ||||||||||||||||||||||||||||||    
T  3086693 atacagtaaaattaagcaaagaagttaggttaaat 3086659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 2181770 - 2181871
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  2181770 atttgtttagtaaaattaaagagaaaaattaggagtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacaggatta 2181869  T
Q  284 at 285  Q
    ||    
T  2181870 at 2181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 12419564 - 12419411
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaatt----------- 272  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||               
T  12419564 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatgggttaa 12419465  T
Q  273 --aaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
      ||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  12419464 ttaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctaggg 12419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 27440952 - 27440849
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  27440952 atttgtttagtaaaattaaggagaaaaattaagagcgatttgttcattttgatttccctaacaattaacattaatattttgattaaattaaatagggtta 27440853  T
Q  284 atat 287  Q
    ||||    
T  27440852 atat 27440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 2182509 - 2182603
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatag 278  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2182509 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgattttcctaacaattaacgttaacattttgattaaattaaatag 2182603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 6304925 - 6304770
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||                
T  6304925 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacaatgtta 6304826  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
      |||||| | ||||||  |||||||||||||||||||||||||||||||||||||    
T  6304825 attaaatatggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 6304770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 26601669 - 26601514
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||                
T  26601669 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccttaacaattaacgttaacattttgattaaattaaacatggtta 26601570  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
      |||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  26601569 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 26601514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 43138025 - 43137934
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43138025 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 43137934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 17637812 - 17637711
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  17637812 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggtta 17637713  T
Q  284 at 285  Q
    ||    
T  17637712 at 17637711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 30180350 - 30180505
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||              |    
T  30180350 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgtttaagttaaacatgatta 30180449  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  30180450 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 30180505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 42977028 - 42976873
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taa 269  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||              | |    
T  42977028 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacatggtta 42976929  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  42976928 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaattctagggc 42976873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 753931 - 753840
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  753931 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaaagttaacattttgattaaattaaa 753840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 33705760 - 33705669
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  33705760 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgtttacattttgattaaattaaa 33705669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 753177 - 753087
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  753177 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 753087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 16679796 - 16679919
Alignment:
Q  196 aaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaat 295  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||  | ||||||      ||||||| ||||||||||||||| ||||||| |||||||    
T  16679796 aaattaaggagaaaaattaggagcaatttgtttattttgatttccacatcaatta------acattttaattaaattaaatagggttaatatagtaaaat 16679889  T
Q  296 taagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||| ||||||||||||||||||||    
T  16679890 taagcaaaggagttaggttaaatctagggc 16679919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 43137382 - 43137292
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  43137382 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 43137292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 34726382 - 34726281
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||| |||    
T  34726382 atttgtttagtaaaattaaagagaaaaattagaagtgatttgtttattttgatttccctaataattaacgttaaaattttgattaaattaaacagggtta 34726283  T
Q  284 at 285  Q
    ||    
T  34726282 at 34726281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 3087541 - 3087386
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taa 269  Q
    |||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||              | |    
T  3087541 atttgtttagtaaaattaaagagaaaaattaagagtgatttgtttattttgatttccccaacaattaacgttaacattttgatcaaattaaacatggtta 3087442  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| || |||||    
T  3087441 attaaataggattaatacagtaaaattaagcaaagaagttaggttaattccagggc 3087386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 34717851 - 34717952
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  34717851 atttatttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 34717950  T
Q  284 at 285  Q
    ||    
T  34717951 at 34717952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 36885890 - 36885746
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taaattaaatagga 280  Q
    ||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||              | |||||||||||     
T  36885890 aaaattaaagagaaaaattaggagcgatttatttattttgatttccctaacaattaacattaacattttgatcaaattaaacatggttaattaaataggg 36885791  T
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||||||||||||||||||||||||||| ||||||||    
T  36885790 ttaatacagtaaaattaagcaaagaagttaggttaattctagggc 36885746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 41691535 - 41691636
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| | |||||    
T  41691535 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacatgatta 41691634  T
Q  284 at 285  Q
    ||    
T  41691635 at 41691636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 198 - 325
Target Start/End: Original strand, 16679639 - 16679760
Alignment:
Q  198 attaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaatta 297  Q
    |||||| |||||||||||||| |||||||||||||||||||||  | ||||||      ||||||||||||||||||||||| ||||||| |||||||||    
T  16679639 attaaggagaaaaattaggagcgatttgtttattttgatttccacatcaatta------acattttgattaaattaaatagggttaatatagtaaaatta 16679732  T
Q  298 agcaaagaagttaggttaaatctagggc 325  Q
    ||||||  | |||||| |||||||||||    
T  16679733 agcaaacgatttaggtaaaatctagggc 16679760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 6304170 - 6304080
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||||    
T  6304170 aaaattaaagagaaaaattaggagcgatttatttattttgattttcctaacaattaacgttaatattttgattaaattaaacaggattaat 6304080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 25696540 - 25696439
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| || |  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| | |||||    
T  25696540 atttgtttagtaaattttaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacatgatta 25696441  T
Q  284 at 285  Q
    ||    
T  25696440 at 25696439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 30755410 - 30755491
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttga 265  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  30755410 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccataacaattaacgttaacattttga 30755491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 16683414 - 16683486
Alignment:
Q  253 attaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||    
T  16683414 attaacattttgattaacttaaatagggttaatatagtaaaattaagcaaaggagttaggttaaatctagggc 16683486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 34726283 - 34726227
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||||    
T  34726283 aattaaatagggttaatacagtaaaatttagcaaagaagttaggttaaatctagggc 34726227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 25696441 - 25696387
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||||||||| ||||||  |||||||||||||||||| ||||||||||||||||    
T  25696441 aattaaatagggttaatacagtaaaattaagcaaagaaattaggttaaatctagg 25696387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 753089 - 753033
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||| | ||||||||||||||||    
T  753089 aattaaatagggttaatacagtaaaattaagcaaagaaataaggttaaatctagggc 753033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 41290040 - 41289984
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| |||| || |||||||||||||||||| ||||||||||| ||||||    
T  41290040 aattaaatagggttaaaatagtaaaattaagcaaagaaattaggttaaatatagggc 41289984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 43137294 - 43137238
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||| | ||||||||||||||||    
T  43137294 aattaaatagggttaatacagtaaaattaagcaaagaaataaggttaaatctagggc 43137238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 325
Target Start/End: Original strand, 2182630 - 2182664
Alignment:
Q  291 aaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||    
T  2182630 aaaattaagcaaagaagttaggttaaatctagggc 2182664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 33705659 - 33705609
Alignment:
Q  271 ttaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  33705659 ttaaatagggttaatacagtaaaattaagcaaagaagttaggtttaatcta 33705609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 34717970 - 34718004
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  34717970 gtaaaattaagcaaagaagttaggttaaatctagg 34718004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 41289909 - 41289875
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  41289909 gtaaaattaagcaaagaagttaggttaaatctagg 41289875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 3890293 - 3890240
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    ||||||||||| |||| || |||||||||||||||||| || ||||||||||||    
T  3890293 aattaaatagggttaaaatagtaaaattaagcaaagaatttgggttaaatctag 3890240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 753812 - 753776
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| ||||||||||||||||||||||||||||||||    
T  753812 gtaagattaagcaaagaagttaggttaaatctagggc 753776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 3890408 - 3890356
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||| | |||| ||  ||||||||||||||||||||||||||||||||    
T  3890408 aattaaataaggttaaaataataaaattaagcaaagaagttaggttaaatcta 3890356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 16683530 - 16683607
Alignment:
Q  205 agaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    |||||||||||||| ||||| |||||||||||||||  | ||      ||||||||||| ||||||||||||||| ||||||||    
T  16683530 agaaaaattaggagcgatttttttattttgatttccacatca------attaacattttaattaaattaaatagggttaatatt 16683607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 39914985 - 39915017
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  39914985 aaaatagggtaattagtttagtttaggtttcat 39915017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 39915083 - 39915115
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  39915083 aaaatagggtaattagtttagtttaggtttcat 39915115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 43137906 - 43137870
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| ||||||||||||||||||||||||||||||||    
T  43137906 gtaagattaagcaaagaagttaggttaaatctagggc 43137870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 2181890 - 2181925
Alignment:
Q  290 taaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||| |||||||||||||||||||||    
T  2181890 taaaattaagcaaataagttaggttaaatctagggc 2181925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 41691654 - 41691688
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||||||||||||||||||||||| |||||||||    
T  41691654 gtaaaattaagcaaagaagttaggtcaaatctagg 41691688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 3890181 - 3890129
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||||| |||| |||| || ||||||||||||||| ||||||||| |||||||    
T  3890181 aattaattagggttaaaatagtaaaattaagcaaaaaagttaggtcaaatcta 3890129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 16685462 - 16685498
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  16685462 gtaaaattaagcaaaggagttaggttaaatttagggc 16685498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 9e-58; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 186 - 323
Target Start/End: Complemental strand, 19893548 - 19893411
Alignment:
Q  186 ttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19893548 ttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatagggttaat 19893449  T
Q  286 attgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |  |||||||||||||||||||||||||||||||||||    
T  19893448 acagtaaaattaagcaaagaagttaggttaaatctagg 19893411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 39094221 - 39094362
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| | ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  39094221 atttgtttagtacaattaaggagaaaaattatgagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 39094320  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  39094321 atatagtaaaattaagcaaagaagttaggttaaatctagggc 39094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 52842856 - 52842997
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  52842856 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaataagatta 52842955  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||| ||||||||||||||    
T  52842956 atacagtaaaattaagcaaagaagttaagttaaatctagggc 52842997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 48520027 - 48519886
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||    
T  48520027 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgacttccctaacaattaacgttaacattttgattaaattaaatagggtta 48519928  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  48519927 atacagtaaaattaagcaaagaagttaggttaaatctagggc 48519886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 198 - 325
Target Start/End: Complemental strand, 28979964 - 28979837
Alignment:
Q  198 attaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaatta 297  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  28979964 attaaggagaaaaattaggagcgatttgtttattttgattttcctaacaattaacgttaacattttgattaaattaaataggattaatacagtaaaatta 28979865  T
Q  298 agcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||||||||||||||||||||    
T  28979864 agcaaagaagttaggttaaatctagggc 28979837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 55290766 - 55290627
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  55290766 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttaatttccctaacaattaaccttaacattttgattaaattaaatagggtta 55290667  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  55290666 ata--gtaaaattaagcaaagaagttaggttaaatctagggc 55290627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 26776807 - 26776667
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||    
T  26776807 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtttattttgattttcctaacaattaacgttaacattttgattaaattaaatagggtta 26776708  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  26776707 atacagtaaaattaagcaaagaagttaggttaaatctaggg 26776667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 19361731 - 19361594
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||    
T  19361731 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaatgttaacattttgattaaattaaatagggtta 19361632  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||| ||||||||||||||||||||| |||||| ||||    
T  19361631 atatggtaaaattaagcaaagaagtttggttaattcta 19361594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 316
Target Start/End: Complemental strand, 26101775 - 26101643
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||  || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  26101775 atttgtttagtaaaattaaggagaaaaattaaaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 26101676  T
Q  284 atattgtaaaattaagcaaagaagttaggttaa 316  Q
    |||  ||||||||||||||||||||||||||||    
T  26101675 atacagtaaaattaagcaaagaagttaggttaa 26101643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 8396435 - 8396573
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||    
T  8396435 atttgtttagtaaaattaaggagaaaaattagaagcaatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaattgggtta 8396534  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    |||  ||||||||||| ||||||||||||||||||||||    
T  8396535 atacagtaaaattaagtaaagaagttaggttaaatctag 8396573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 29529123 - 29528989
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  29529123 atttgtttagtaaaattaaggagaaaatttagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 29529024  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||  ||||||||||| ||||||||||||||||||    
T  29529023 atacagtaaaattaagaaaagaagttaggttaaat 29528989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 19361095 - 19360970
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||   |||||    
T  19361095 aaaactaaggagaaaaattagaagtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaataagattaatacaataaaa 19360996  T
Q  295 ttaagcaaagaagttaggttaaatct 320  Q
    ||||||||||||||||||||||||||    
T  19360995 ttaagcaaagaagttaggttaaatct 19360970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 4137774 - 4137633
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| |||||||||| | | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | |||    
T  4137774 atttttttagtaaaattaaggagaaaaattatgtgcgatttgtttattttgatttccttaacaattaacgttaacattttgattaaattaaatatggtta 4137675  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||||||||||||||||||||||||| |||||    
T  4137674 atacagtaaaattaagcaaagaagttaggttaaatcaagggc 4137633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 9373449 - 9373581
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||      |||||||||||||||||||  ||||||    
T  9373449 atttgtttagtaaaattaaggagaaaaattaggagtgatttgtttattttgatttctataacaatta------acattttgattaaattaaaccggatta 9373542  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  9373543 atatagtaaaattaagcaaagaagttaggttaaatctag 9373581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 9373953 - 9374088
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||      ||||||||||||||||||||||| |||    
T  9373953 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccataacaatta------acattttgattaaattaaatagggtta 9374046  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||  ||||||||||||||||||||||||||||| ||||||    
T  9374047 atataataaaattaagcaaagaagttaggttaaatttagggc 9374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 51656555 - 51656420
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||||| ||||||||||||||      |||||||||||||||||| |||    
T  51656555 atttgtttagtaaaattaaggagaaaaattaagagcgatttgtttattttgatttccataacaattaacatt------ttgattaaattaaatagggtta 51656462  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  51656461 atatagtaaaattaagcaaagaatttaggttaaatctagggc 51656420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 53802033 - 53802170
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||    
T  53802033 atttgtttagtaaaattaagaagaaaaattatgtgcgatttgtttattttgatttccctaccaattaacgttaacattttgattaaattaaatagggtta 53802132  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  |||| |||||||| |||||||| ||||||||||    
T  53802133 atacagtaatattaagcagagaagttatgttaaatcta 53802170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 35860688 - 35860810
Alignment:
Q  198 attaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaatta 297  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||    
T  35860688 attaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaactttaacattttgattaaattaaatagggttaatacagtaaaatta 35860786  T
Q  298 agcaaagaagttaggttaaatcta 321  Q
    |||||| |||||| ||||||||||    
T  35860787 agcaaaaaagttaagttaaatcta 35860810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 26101111 - 26101009
Alignment:
Q  223 ttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||||| |    
T  26101111 ttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatagggttaatacagtaaaattaagcaaagaagttaagttaaatcttg 26101012  T
Q  323 ggc 325  Q
    |||    
T  26101011 ggc 26101009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 171 - 325
Target Start/End: Original strand, 9373743 - 9373892
Alignment:
Q  171 ataagaataggag-atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaa 269  Q
    ||||||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||| | |||||       |||||||||| |||||    
T  9373743 ataagaataggaggatttgtttacaaaaattaaggagaaaaattaggagtgatttgtttattttgattttcataaca------cttaacatttttattaa 9373836  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    | ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  9373837 actaaatcggattaatatagtataattaagcaaagaagttaggttaaatctagggc 9373892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 40822101 - 40821948
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa-------- 275  Q
    |||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||            
T  40822101 atttgtttagtaaaattaaggtgaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 40822002  T
Q  276 ------taggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
          |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  40822001 attaaatagggttaatatagtaaaattaagcaaagaagttaggttaaatctagg 40821948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 53521729 - 53521857
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| | |||||||||||| ||||||||||||| ||||||| |||||||||      ||||||||||||||||||||||| |||    
T  53521729 atttatttagtaaaattaaggaaaaaaattaggagcgatttgtttatttcgatttccataacaatta------acattttgattaaattaaatagggtta 53521822  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||| ||||||||||||||||||||||||||||||    
T  53521823 atatagtaaaattaagcaaagaagttaggttaaat 53521857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 22521923 - 22522016
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaata 277  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22521923 atttgtttagtaaaattatggagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaata 22522016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 4138732 - 4138636
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  4138732 tttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacgattaacattaacattttgattaaattaaacaggattaat 4138636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 46489283 - 46489403
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgattt-gtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatt 282  Q
    |||||||||| ||||||||| ||||||||||||||  | || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46489283 atttgtttagtaaaattaaggagaaaaattaggagctacttagttcattttaatttccctaacaattaacattaacattttgattaaattaaatagggtt 46489382  T
Q  283 aatattgtaaaattaagcaaa 303  Q
    ||||| ||||| |||||||||    
T  46489383 aatatagtaaatttaagcaaa 46489403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 35855820 - 35855972
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaatt----------- 272  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||               
T  35855820 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaaagttaacattttgattaaattaaacagggtta 35855919  T
Q  273 ---aaataggattaatattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
       ||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  35855920 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctag 35855972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 53801512 - 53801664
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||              |    
T  53801512 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacaaggtta 53801611  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  53801612 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctag 53801664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 8527185 - 8527030
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taa 269  Q
    |||||||||| ||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||              | |    
T  8527185 atttgtttagtaaaattaaagagaaaaattaggagctatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggtta 8527086  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  8527085 attaaataggattaatacagtaaaattaagcaaagaagttaggttaattctagggc 8527030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 19368451 - 19368358
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaata 277  Q
    |||| ||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19368451 atttatttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgataaaattaaata 19368358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 29529870 - 29529769
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| ||| |||    
T  29529870 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaatgttaacattttgatcaaattaaacagggtta 29529771  T
Q  284 at 285  Q
    ||    
T  29529770 at 29529769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 39093595 - 39093696
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||    
T  39093595 atttgtttagtaaaattaaagagaaaaattaggagcgatttttttattttgatttccctaacaattaacgttaacattttaattaaattaaacagggtta 39093694  T
Q  284 at 285  Q
    ||    
T  39093695 at 39093696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 55293759 - 55293679
Alignment:
Q  205 agaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| |||||    
T  55293759 agaaaaattaggagcgatttgtttattttgattttcctaacaattaacgttaacattttgattaaattaaacagggttaat 55293679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 19367811 - 19367744
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaa 251  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  19367811 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaa 19367744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 36006479 - 36006550
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacatt 255  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  36006479 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgattttcataacaattaacatt 36006550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 9373136 - 9373272
Alignment:
Q  197 aattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacatt---ttgatta-----aattaaataggattaatatt 288  Q
    ||||||| |||||||||||||| |||||||||||||||||||||  |||||||||||||   |||   || | ||     ||||||||||| |||||||     
T  9373136 aattaaggagaaaaattaggagcgatttgtttattttgatttcctaaacaattaacattttgattaaattaaatagggttaattaaatagggttaatata 9373235  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  9373236 gtaaaattaagcaaagaagttaagttaaatttagggc 9373272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 29529771 - 29529715
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  29529771 aattaaatagggttaatacagtaaaattaagcaaagaagttaggttaattctagggc 29529715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 55293681 - 55293625
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||||    
T  55293681 aattaaataggcttaatacagtaaaattaagcaaagaagttaggttaaatatagggc 55293625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 14555698 - 14555645
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    ||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||    
T  14555698 aattaaatagggttaatatagtaaaattaaacaaaaaagttaggttaaatctag 14555645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 16036486 - 16036429
Alignment:
Q  266 ttaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||| ||||||| ||||||||||||| |||| ||| ||||||||||||    
T  16036486 ttaaattaaatagggttaatatagtaaaattaagcagagaaattaagttaaatctagg 16036429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 16040715 - 16040663
Alignment:
Q  266 ttaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||||||||    
T  16040715 ttaaattaaataggattaatatagtaaaattaagtagagaaattaggttaaat 16040663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 9374143 - 9374196
Alignment:
Q  253 attaacattttgattaaattaaataggatta--atattgtaaaattaagcaaag 304  Q
    ||||||||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  9374143 attaacattttgattaaattaaatagggttaatatattgtaaaagtaagcaaag 9374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 16047070 - 16047013
Alignment:
Q  266 ttaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||| ||||||| ||||||||||||| |||| ||| ||||||| ||||    
T  16047070 ttaaattaaatagggttaatatagtaaaattaagcagagaaattaagttaaatatagg 16047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 324
Target Start/End: Original strand, 9374197 - 9374225
Alignment:
Q  296 taagcaaagaagttaggttaaatctaggg 324  Q
    |||||||||||||||||||||||||||||    
T  9374197 taagcaaagaagttaggttaaatctaggg 9374225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 36006572 - 36006623
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||| | ||||| ||||||||||||||||| | |||||||||||||    
T  36006572 aattaaatagggt-aatatagtaaaattaagcaaagatgctaggttaaatcta 36006623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 46489002 - 46489034
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    ||||||| |||||||||||||||||||||||||    
T  46489002 aaaatagtgtaattagtttagtttaggtttcat 46489034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 49453788 - 49453836
Alignment:
Q  275 ataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||| ||||||| ||||||||||||| |||| ||||| ||||||||||    
T  49453788 atagggttaatatagtaaaattaagcagagaaattagggtaaatctagg 49453836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 36742171 - 36742030
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  36742171 atttgtttagtaaaattaaggagaaaaattagaagtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 36742072  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  36742071 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 36742030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 39713867 - 39713726
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  39713867 atttttttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 39713768  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  39713767 atactgtaaaattaagcaaagaagttaggttaaatctagggc 39713726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 195 - 322
Target Start/End: Complemental strand, 37061904 - 37061777
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37061904 aaaattaaggagaaaaattaggagcgatttatttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatagtaaaa 37061805  T
Q  295 ttaagcaaagaagttaggttaaatctag 322  Q
    |||||||||||| |||||||||||||||    
T  37061804 ttaagcaaagaatttaggttaaatctag 37061777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 3758950 - 3759091
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  3758950 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 3759049  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  3759050 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 3759091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 13172619 - 13172760
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  13172619 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 13172718  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  13172719 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 13172760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 37061703 - 37061566
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||| ||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37061703 atttgtctagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatatgatta 37061604  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  37061603 atatagtaaaattaagcaaataagttaggttaaatcta 37061566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 39405706 - 39405565
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  39405706 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 39405607  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||| ||||||||||||||||||    
T  39405606 atacagtaaaattaagcaaagaatttaggttaaatctagggc 39405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 46106092 - 46106233
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||    
T  46106092 atttgtttagtaaaattaaggagaaaaattatgtgtgatttgtttattttgatttccctaataattaacgttaacattttgattaaattaaatagggtta 46106191  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  46106192 atacagtaaaattaagcaaagaagttaggttaaatctagggc 46106233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 17741333 - 17741473
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  17741333 atttgtttagtaaaattaagaagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 17741432  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  |||||||||| ||||||||||||||||||| |||||    
T  17741433 atacagtaaaattaatcaaagaagttaggttaaatttaggg 17741473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 24549093 - 24549229
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    ||||||| || ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  24549093 atttgttcagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 24549192  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatct 320  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24549193 atatagtaaaattaagcaaagaagttaggttaaatct 24549229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 52802609 - 52802745
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||      
T  52802609 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatacc 52802708  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  52802709 gtaaaattaagcaaagaagttaggttaaatctagggc 52802745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 20590673 - 20590814
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||    
T  20590673 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaactttaacattttgattaaattaaatagagtta 20590772  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  20590773 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 20590814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 5755268 - 5755408
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  5755268 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaataaggtta 5755367  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||| ||||||||||||||||||||||||||||||    
T  5755368 atacagtaaagttaagcaaagaagttaggttaaatctaggg 5755408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 8988872 - 8989011
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  8988872 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 8988970  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  8988971 atacagtaaaattaagcaaataagttaggttaaatctaggg 8989011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 37351772 - 37351911
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  37351772 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 37351870  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  37351871 atacagtaaaattaagcaaataagttaggttaaatctaggg 37351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 37356671 - 37356810
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  37356671 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 37356769  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  37356770 atacagtaaaattaagcaaataagttaggttaaatctaggg 37356810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 12681006 - 12680869
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | | ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||    
T  12681006 atttgtttagtaaaattaaggagaaaaattacgtgcgatttgtttattttgatttccctaataattaacgttaacattttgattaaattaaatagggtta 12680907  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  |||||||||||||||||||||||||||||||||    
T  12680906 atacagtaaaattaagcaaagaagttaggttaaatcta 12680869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 50043008 - 50043147
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  50043008 atttgtttagtaaaattaaggagaaaaattaggagcgatttatt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 50043106  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  50043107 atacagtaaaattaagcaaataagttaggttaaatctaggg 50043147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 8964510 - 8964644
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||      
T  8964510 tttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaataca 8964608  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8964609 gtaaaattaagcaaataagttaggttaaatctaggg 8964644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 42349705 - 42349574
Alignment:
Q  190 ttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattg 289  Q
    |||| |||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |    
T  42349705 ttagtaaaactaaggagaaaaattatgagtgatttgttcattttgatttccctaacaattaacattaagattttgattaaattaaatagggttaatatag 42349606  T
Q  290 taaaattaagcaaagaagttaggttaaatcta 321  Q
    |||| |||||||||||||||||||||||||||    
T  42349605 taaatttaagcaaagaagttaggttaaatcta 42349574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 29712990 - 29713127
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| || |||||   ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  29712990 atttgtttagtaacattaaagtgaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 29713089  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  29713090 atatagtaaaattaagcaaagaagttaggttacatcta 29713127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 50118439 - 50118298
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||    
T  50118439 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttcattaaattaaaaagggtta 50118340  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||||| |||||||||||||||||||| ||||    
T  50118339 atacagtaaaattaagtaaagaagttaggttaaatcttgggc 50118298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 29713496 - 29713635
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||  ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  29713496 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaataggggta 29713594  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||   ||||||||||||||||||||| |||||||||||||    
T  29713595 atacaataaaattaagcaaagaagttacgttaaatctaggg 29713635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 2117860 - 2117997
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||    
T  2117860 atttgtttagtaaaattaagaagaaaaattatgtgcgatttgtttattttgatttccctaccaattaacgttaacattttgattaaattaaatagggtta 2117959  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  |||| |||||||| |||||||| ||||||||||    
T  2117960 atacagtaatattaagcagagaagttatgttaaatcta 2117997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 47555796 - 47555660
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || |||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||||||| |||    
T  47555796 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttatttt-atttcccttacaattaacgttaatattttgattaaattaaatagggtta 47555698  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  ||||||||||||||| |||||||||||||||||    
T  47555697 atacagtaaaattaagcaaataagttaggttaaatcta 47555660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 171 - 321
Target Start/End: Original strand, 26602628 - 26602773
Alignment:
Q  171 ataagaataggag-atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaa 269  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||| |||||      |||| ||||||||||||    
T  26602628 ataagaataggaggatttgtttagtaaaattaaggagaaaaatttggagcgatttgtttattttgatttccataaca------attaccattttgattaa 26602721  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  26602722 attaaatagggttaatataataaaattaagcaaagaagttaggttaaatcta 26602773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 43022443 - 43022585
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgattt-gtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatt 282  Q
    |||||||||| | ||||||   ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  43022443 atttgtttagtataattaaagtgaaaaattaggagcgattttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtt 43022542  T
Q  283 aatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||  |||||||||| |||||||||||||||| |||||||||    
T  43022543 aatacagtaaaattaaacaaagaagttaggttacatctagggc 43022585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 54866933 - 54866802
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| |||||||||||| |||||||||| | ||||||||||||||      ||||||||||||||||||||||    
T  54866933 atttgtttagtaaaattaaggagaaaaattatgagtgatttgttcattttgattttcataacaattaacatt------ttgattaaattaaataggatta 54866840  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  54866839 atatagtaaaattaagcaaagaaattaggttaaatcta 54866802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 46419745 - 46419594
Alignment:
Q  186 ttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa---------- 275  Q
    |||||||| ||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||              
T  46419745 ttgtttagtaaaattaaggagaaagattaggagcgatttgttgattttgatttccctaacaattaacattaacattttgattaaattaaataggttaatt 46419646  T
Q  276 ---taggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
       |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  46419645 gaataggattaatatagtaaatttaagcaaagaagttaggttaaatctaggg 46419594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 20589989 - 20590144
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||              |    
T  20589989 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 20590088  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  20590089 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 20590144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 46105192 - 46105347
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||              |    
T  46105192 atttgtttagtaaaattaaagagaaaaattaggagcgatttttttattttgatttccctaacaattaacattaacattttgattaaattaaacagggtta 46105291  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  46105292 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 46105347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 195 - 318
Target Start/End: Complemental strand, 9887644 - 9887522
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||  |||||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||   ||||||    
T  9887644 aaaattaaagagaaaaattaggagcgatttgtt-attttgatttccctaacaactaacgttaacattttgattaaattaaatagggttaatgcagtaaaa 9887546  T
Q  295 ttaagcaaagaagttaggttaaat 318  Q
    ||||||||| ||||||||||||||    
T  9887545 ttaagcaaataagttaggttaaat 9887522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 8531883 - 8531977
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatag 278  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8531883 atttgtttagtaaaattaaggagaaaaattatgagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatag 8531977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 42348370 - 42348269
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  42348370 atttgtttagtaaaattaaggagaaaaattaggagctatttgttcattttgatttccctaacacttaacattaacattttgattaaattaaatatgatta 42348271  T
Q  284 at 285  Q
    ||    
T  42348270 at 42348269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 42348652 - 42348549
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgat--ttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggat 281  Q
    |||||||||| ||||||||| |||||||||||||| |||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42348652 atttgtttagtaaaattaaggagaaaaattaggagcgatatttgttcattttgatttccctaacaattaacattaacattttgattaaattaaatatgat 42348553  T
Q  282 taat 285  Q
    ||||    
T  42348552 taat 42348549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 8987492 - 8987583
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8987492 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 8987583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 24944519 - 24944365
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  24944519 atttttttagtaaaattaaggataaaaattaggagcgatttgcttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 24944420  T
Q  284 a--------------tattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |              || |||||||||||||||||||||||||||||||||||||    
T  24944419 attaaatagggttagtactgtaaaattaagcaaagaagttaggttaaatctaggg 24944365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 37350392 - 37350483
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37350392 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 37350483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 47556428 - 47556274
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||                
T  47556428 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaatattttgattaaattaaacatggtta 47556329  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
      |||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  47556328 tttaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctaggg 47556274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 52801285 - 52801438
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||              |    
T  52801285 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacattttatttaaattaaacaggatta 52801384  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  52801385 attaaataggattaatacagtaaaattaagcaaagaagttaggttaaatctagg 52801438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 24548340 - 24548441
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  24548340 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggtta 24548439  T
Q  284 at 285  Q
    ||    
T  24548440 at 24548441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 24945028 - 24944884
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat--------------taaatagga 280  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||              ||||||||     
T  24945028 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaattaaataggg 24944929  T
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||||||||||||||||||||||||||||||||||||    
T  24944928 ttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 24944884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 50119077 - 50118988
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaatta 273  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50119077 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaatta 50118988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 2117117 - 2117271
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| | ||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||              |    
T  2117117 atttgtttagtacaattaaagagaaaaattatgagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacatggtta 2117216  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  2117217 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctaggg 2117271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 9888398 - 9888307
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  9888398 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaaagttaacattttgattaaattaaa 9888307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 24947755 - 24947601
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||| ||||| ||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||                
T  24947755 atttatttagtaaaattaaagagaaaaattaggaacgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaagagggtta 24947656  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
      |||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  24947655 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctaggg 24947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 8988135 - 8988225
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  8988135 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 8988225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 37351035 - 37351125
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  37351035 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 37351125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 43023689 - 43023836
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacat---tt----tgattaaattaaat 276  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||   ||     |  | ||||||||    
T  43023689 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacattaacataaattaaacagggttaattaaat 43023787  T
Q  277 aggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  43023788 agggttaatacagtaatattaagcaaagaagttaggttaaatctagggc 43023836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 3758305 - 3758396
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  3758305 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccttaacaattaacgttaacattttgatcaaattaaa 3758396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 26603397 - 26603542
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacat----tttgat----taaattaaa 275  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||||   ||    || |||    | |||||||    
T  26603397 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttatttcgatttccataacaattaacattttgattaaattagatagggttaattaaa 26603496  T
Q  276 taggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||    
T  26603497 tagggttaatatagtaaaattaagcaaagaagttaggttaaatcta 26603542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 43022964 - 43023101
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacat---tt----tgattaaattaaataggattaatat 287  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||     |  | ||||||||||| ||||||     
T  43022964 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacataaattaaacagggttaattaaatagggttaatac 43023063  T
Q  288 tgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
     |||| ||||||||||||||||||||||||||||||||    
T  43023064 agtaatattaagcaaagaagttaggttaaatctagggc 43023101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 49355443 - 49355354
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaa 274  Q
    |||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  49355443 atttgtttagtaaaattaaggagaaaaattaggagcgatctgtttattttgattt-cataacaattaacattaacattttgattaaattaa 49355354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 39404976 - 39404876
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||   |||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  39404976 atttgtttagtaaaattaaggagaaaaattaggaacaatttatt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 39404878  T
Q  284 at 285  Q
    ||    
T  39404877 at 39404876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 16904665 - 16904731
Alignment:
Q  209 aaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16904665 aaattaggaatgatttgtttattttgatttccctaacaattaacgttaatattttgattaaattaaa 16904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 39714545 - 39714445
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| || |  |||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  39714545 atttgtttagtaaattttaagagaaaaattaggagcgatt-gtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 39714447  T
Q  284 at 285  Q
    ||    
T  39714446 at 39714445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 42348484 - 42348425
Alignment:
Q  264 gattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  42348484 gattaaattaaatagggttaatatagtaaatttaagcaaagaagttaggttaaatctagg 42348425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 42348200 - 42348139
Alignment:
Q  264 gattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||||    
T  42348200 gattaaattaaatagggttaatatagtaaatttaagtaaagaagttaggttaaatctagggc 42348139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 48808325 - 48808270
Alignment:
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| |||| ||  ||||| ||||||||||||||||||||||||||||||    
T  48808325 attaaatagggttaaaataataaaactaagcaaagaagttaggttaaatctagggc 48808270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 299
Target Start/End: Complemental strand, 49355557 - 49355469
Alignment:
Q  205 agaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaag 299  Q
    ||||||||||||| |||||| ||||||||||||||| ||||      || ||| |||||| |||||||||||||| |||||||  ||||||||||    
T  49355557 agaaaaattaggattgatttatttattttgatttccataac------caataatattttgtttaaattaaatagggttaatataataaaattaag 49355469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 39714427 - 39714393
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  39714427 gtaaaattaagcaaagaagttaggttaaatctagg 39714393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 3758404 - 3758460
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  ||||||||||||||| || ||||||||| ||||||||    
T  3758404 aattaaatagggttaatacagtaaaattaagcaaaaaatttaggttaattctagggc 3758460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 321
Target Start/End: Complemental strand, 8120493 - 8120461
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||||||||||||||||||||||||||||||||    
T  8120493 gtaaaattaagcaaagaagttaggttaaatcta 8120461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 8987603 - 8987647
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  8987603 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 8987647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 9888279 - 9888243
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| ||||||||||||||||||||||||||||||||    
T  9888279 gtaagattaagcaaagaagttaggttaaatctagggc 9888243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 37350503 - 37350547
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  37350503 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 37350547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 48808617 - 48808585
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  48808617 aaaatagggtaattagtttagtttaggtttcat 48808585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 49355333 - 49355293
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  49355333 ttaatatagtcaaattaagcaaagaagttaggttaaatcta 49355293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 16904760 - 16904795
Alignment:
Q  290 taaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||| |||||||||||||||||||||    
T  16904760 taaaattaagcaaaaaagttaggttaaatctagggc 16904795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 30527853 - 30527818
Alignment:
Q  290 taaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||||||||||||||||||||||| ||||    
T  30527853 taaaattaagcaaagaagttaggttaaatcttgggc 30527818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Complemental strand, 39404858 - 39404823
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||||||||||||||||| |||||||||||||||||    
T  39404858 gtaaaattaagcaaagaaattaggttaaatctaggg 39404823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 1325640 - 1325590
Alignment:
Q  275 ataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||| ||||||| ||||||||||||| |||| ||||| ||||||||||||    
T  1325640 atagggttaatatagtaaaattaagcagagaaattagggtaaatctagggc 1325590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 24527971 - 24527921
Alignment:
Q  275 ataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||| ||||||| ||||||||||||| |||| ||||| ||||||||||||    
T  24527971 atagggttaatatagtaaaattaagcagagaaattagggtaaatctagggc 24527921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 24528059 - 24528013
Alignment:
Q  275 ataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||| ||||||| ||||||||||||| |||| ||||||||||||||    
T  24528059 atagggttaatatagtaaaattaagcagagaaattaggttaaatcta 24528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 8988243 - 8988279
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||| | ||||||||||||||||    
T  8988243 gtaaaattaagcaaagaaataaggttaaatctagggc 8988279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 24548459 - 24548495
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  24548459 gtaaaattaagcaaagaagttagattaattctagggc 24548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 37351143 - 37351179
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||| | ||||||||||||||||    
T  37351143 gtaaaattaagcaaagaaataaggttaaatctagggc 37351179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 46419989 - 46419957
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||| ||||||    
T  46419989 aaaatagggtaattagtttagtttagatttcat 46419957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 46420087 - 46420055
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    ||||||||| |||||||||||||||||||||||    
T  46420087 aaaatagggcaattagtttagtttaggtttcat 46420055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 50118958 - 50118922
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  50118958 gtaaaattaagcaaagaagttatgttaattctagggc 50118922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 9e-55; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 7855335 - 7855199
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  7855335 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 7855236  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatct 320  Q
    |||| ||||||||||||||||||||||||||||||||    
T  7855235 atatagtaaaattaagcaaagaagttaggttaaatct 7855199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 17172569 - 17172705
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |    
T  17172569 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatact 17172668  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  17172669 gtaaaattaagcaaagaagttaggttaaatctagggc 17172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 9151089 - 9151230
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  |||    
T  9151089 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccctaacaataaacgttaacattttgattaaattaaatagagtta 9151188  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  9151189 atacagtaaaattaagcaaagaagttaggttaaatctagggc 9151230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 27733325 - 27733184
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  27733325 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttaatttccctaacaattaacgttaacattttgattaaattaaatagggtta 27733226  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  27733225 atacagtaaaattaagcaaagaagttaggttaaatctagggc 27733184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 4850118 - 4850259
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4850118 atttgtttagtaaaattaaggagaaaatttatgtgcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatagggtta 4850217  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||| ||||||    
T  4850218 atacagtaaaattaagcaaagaagttaggttaaatatagggc 4850259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 31897185 - 31897044
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  31897185 atttttttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 31897086  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
     || |||||||||||||||| |||||||||||||||||||||    
T  31897085 ctactgtaaaattaagcaaaaaagttaggttaaatctagggc 31897044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 34872748 - 34872889
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  34872748 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaacttaaatagggtta 34872847  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||| ||||||||    
T  34872848 atacagtaaaattaagcaaagaagttaggttaattctagggc 34872889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 35155860 - 35155719
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  35155860 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 35155761  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||| ||||||||||||||||||||| ||||    
T  35155760 atacagtaaaattaaccaaagaagttaggttaaatcttgggc 35155719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 189 - 325
Target Start/End: Complemental strand, 48527778 - 48527642
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||      
T  48527778 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaatgttaacattttgattaaattaaatagggttaataca 48527679  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  48527678 gtaaaattaagcaaagaagttaggttaaatctagggc 48527642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 203 - 325
Target Start/End: Complemental strand, 39648334 - 39648212
Alignment:
Q  203 gtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaa 302  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  39648334 gtagtaaaattaggagcgatttgtttaatttgatttccctaacaattaactttaacattttgattaaattaaatagggttaatactgtaaaattaagcaa 39648235  T
Q  303 agaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||    
T  39648234 agaagttaggttaaatctagggc 39648212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 44806248 - 44806389
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||    
T  44806248 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaatgttaacattttgattaaattaaatagggtta 44806347  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||   ||||||||||||||||||||||||||||||| ||||    
T  44806348 atacattaaaattaagcaaagaagttaggttaaatcttgggc 44806389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 29468889 - 29469028
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||  ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  29468889 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaataggggta 29468987  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  29468988 atacagtaaaattaagcaaagaagttaggttaaatctaggg 29469028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 49144406 - 49144266
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| |||| |||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  49144406 atttgtttagtaaaactaaggagaaaaattatgtgtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 49144307  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| || |||||||||||||||||    
T  49144306 atacagtaaaattaagcaaataaattaggttaaatctaggg 49144266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 690958 - 691095
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||    
T  690958 atttgtttagtaaaattaaggagaaaaattagaagcaatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaattgggtta 691057  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  ||||||||||| |||||||||||||||||||||    
T  691058 atacagtaaaattaagtaaagaagttaggttaaatcta 691095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 34873490 - 34873626
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  34873490 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttgttttgatttccctaacaattaacgttaacattttgattaaattaaatatggtta 34873589  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatct 320  Q
    |||   |||||||||||||||||||||||||||||||    
T  34873590 atacaataaaattaagcaaagaagttaggttaaatct 34873626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 24682662 - 24682529
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  24682662 atttgtttagtaaaattaaggagaaaaattaggaacgattt-tttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 24682564  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||  ||||||||||||||| ||||||||||||||    
T  24682563 atacagtaaaattaagcaaataagttaggttaaat 24682529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 21669603 - 21669462
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||| | ||||||||| |||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  21669603 atttgtttggtaaaattaaggagaaaaatcaggagctatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 21669504  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||   |||||||||| ||||||||||||||||||| |||||    
T  21669503 atacaataaaattaagaaaagaagttaggttaaatccagggc 21669462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 39277920 - 39278061
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||| | ||||||||| |||||||| |||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||    
T  39277920 atttgtttggtaaaattaaggagaaaaatcaggagctatttgtttattttgatttctctaacaattaacgttaacattttgattaaattaaatagggtta 39278019  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||||| ||||||||||||||||||| |||||    
T  39278020 atacagtaaaattaagaaaagaagttaggttaaatccagggc 39278061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 27734034 - 27733921
Alignment:
Q  205 agaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaag 304  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||  |||||||||||||||     
T  27734034 agaaaaattaggagagatttgtttattttgatttccctaacaattaacgttaacattttgaataaattaaacagggttaatacagtaaaattaagcaaaa 27733935  T
Q  305 aagttaggttaaat 318  Q
    ||||||||||||||    
T  27733934 aagttaggttaaat 27733921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 4849374 - 4849475
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  4849374 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaacagggtta 4849473  T
Q  284 at 285  Q
    ||    
T  4849474 at 4849475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 9150567 - 9150668
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  9150567 atttgtttagtaaaattaaagagaaaaattaggagtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 9150666  T
Q  284 at 285  Q
    ||    
T  9150667 at 9150668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 7856090 - 7855935
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taa 269  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||              | |    
T  7856090 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacaatgtta 7855991  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  7855990 attaaataggattaatacagtaaaattaagcaaagaagttaggttaattctagggc 7855935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 49145281 - 49145190
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49145281 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccgtaacaattaacattaacattttgattaaattaaa 49145190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 11835346 - 11835253
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaata 277  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  11835346 atttgtttagtaaaattatggagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttaattaaattaaata 11835253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 24684139 - 24684048
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| |||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24684139 atttgtttagtaaaactaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 24684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 29468369 - 29468523
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||   ||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||              |    
T  29468369 atttgtttagtaaaattaaagtgaaaaattaggagcgatttttttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 29468468  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  29468469 attaaatagggttaatatagtaaaattaagcaaagaagttaggttacatctaggg 29468523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 24683385 - 24683295
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  24683385 aaaattaaagagaaaaattaagagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaat 24683295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 17171287 - 17171388
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  17171287 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 17171386  T
Q  284 at 285  Q
    ||    
T  17171387 at 17171388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 35156498 - 35156397
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  35156498 atttgtttagtaaaattaaagagaaaaattaggatcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggtta 35156399  T
Q  284 at 285  Q
    ||    
T  35156398 at 35156397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 44805500 - 44805601
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  44805500 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggtta 44805599  T
Q  284 at 285  Q
    ||    
T  44805600 at 44805601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 39648973 - 39648818
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||| |||              |    
T  39648973 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaataattaacgttaacattttgtttaagttaaacatgatta 39648874  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  39648873 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 39648818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 31897814 - 31897661
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||| || |  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||              |    
T  31897814 atttgtttagtaaattttaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacatgatta 31897715  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  31897714 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagg 31897661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 34989411 - 34989530
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| |||||||||| |||  ||||||||||||| |||||| |||| ||||      ||||||||||||||||||||||| | |    
T  34989411 atttctttagtaaaattaaggagaaaaattaagagcaatttgtttattttaatttccgtaactatta------acattttgattaaattaaatagggtga 34989504  T
Q  284 atattgtaaaattaagcaaagaagtt 309  Q
    |||| | |||||||||||||||||||    
T  34989505 atatagaaaaattaagcaaagaagtt 34989530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 21598303 - 21598246
Alignment:
Q  220 gatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaata 277  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  21598303 gatttgtttattttgatttccctaacaattaacgttaacattttaattaaattaaata 21598246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 33637773 - 33637682
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttatttt-gatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||  ||||||||  ||||||||||||||  ||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||    
T  33637773 atttgtttaataaaattaaagagaaaaattaggagc-atttgtttatttttgatttccctaaaaattaacgttaatattttgattaaattaaa 33637682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 255
Target Start/End: Complemental strand, 35101069 - 35100977
Alignment:
Q  164 gttatggataagaataggag-atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacatt 255  Q
    |||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||  |||  |||||||||||||   ||||||||||||||    
T  35101069 gttatggataagaataggaggatttgtttagtaaaattaagcagaaaaattatgagccattgatttattttgatttttataacaattaacatt 35100977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 49145179 - 49145123
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  49145179 aattaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 49145123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 35156399 - 35156343
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  35156399 aattaaatagggttaatacagtaaaattaagcaaagaagttaggttaattctagggc 35156343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 49145051 - 49144999
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  49145051 aattaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatcta 49144999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34989145 - 34989190
Alignment:
Q  1 aggtatgttaactaaccagatgaagatttcaatgatcaacaaaata 46  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  34989145 aggtatgttaactaatcagatgatgatttcaatgatcaacaaaata 34989190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 33637674 - 33637618
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||| ||||||| ||||||||||||||||||    
T  33637674 aattaaatagggttaatacagtaaaattaaacaaagaaattaggttaaatctagggc 33637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 325
Target Start/End: Original strand, 4849495 - 4849529
Alignment:
Q  291 aaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||    
T  4849495 aaaattaagcaaagaagttaggttaaatctagggc 4849529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 17171406 - 17171440
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  17171406 gtaaaattaagcaaagaagttaggttaaatctagg 17171440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 24684020 - 24683984
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24684020 gtaagattaagcaaagaagttaggttaaatctagggc 24683984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 29322027 - 29321995
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  29322027 aaaatagggtaattagtttagtttaggtttcat 29321995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 44805619 - 44805655
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||| ||||||||    
T  44805619 gtaaaattaagcaaagaagttaggttaattctagggc 44805655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 35074881 - 35074830
Alignment:
Q  204 tagaaaaattaggagtgatttgtttattttgatttccctaacaattaacatt 255  Q
    ||||||||||||||| ||||  ||||||||||||| | ||||||||||||||    
T  35074881 tagaaaaattaggagcgattgatttattttgattttcataacaattaacatt 35074830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35075149 - 35075104
Alignment:
Q  1 aggtatgttaactaaccagatgaagatttcaatgatcaacaaaata 46  Q
    ||||||| ||||||| ||||||| ||||| ||||||||||||||||    
T  35075149 aggtatgctaactaagcagatgatgatttgaatgatcaacaaaata 35075104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 275
Target Start/End: Complemental strand, 49145088 - 49145059
Alignment:
Q  246 aattaacattaacattttgattaaattaaa 275  Q
    ||||||||||||||||||||||||||||||    
T  49145088 aattaacattaacattttgattaaattaaa 49145059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 29322124 - 29322092
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    ||||||||||||||||||| |||||||||||||    
T  29322124 aaaatagggtaattagttttgtttaggtttcat 29322092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 35074793 - 35074750
Alignment:
Q  279 gattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||    
T  35074793 gattaatatagtaaaattaagcaaagaaatta-gttaaatctagg 35074750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 9e-55; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 189 - 325
Target Start/End: Complemental strand, 4289394 - 4289258
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |    
T  4289394 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatact 4289295  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  4289294 gtaaaattaagcaaagaagttaggttaaatctagggc 4289258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 10875513 - 10875372
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  10875513 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 10875414  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||||||||||||||||||| || ||||||||    
T  10875413 atacagtaaaattaagcaaagaagttaggtgaattctagggc 10875372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 18090984 - 18090844
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  ||||||||||  || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  18090984 atttgtttagtaaaattaaagagaaaaattaaaagagatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 18090885  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  18090884 atacagtaaaattaagcaaagaagttaggttaaatctaggg 18090844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 42782344 - 42782480
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  42782344 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 42782443  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatct 320  Q
    |||   |||||||||||||||||||||||||||||||    
T  42782444 atacaataaaattaagcaaagaagttaggttaaatct 42782480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 19487947 - 19488081
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  19487947 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 19488046  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||  ||||||||||| ||||||||||||||||||    
T  19488047 atacagtaaaattaagaaaagaagttaggttaaat 19488081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 6931577 - 6931712
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||    
T  6931577 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccctaacaattaaagttaacattttgattaaattaaatatggtta 6931676  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatc 319  Q
    |||  || ||||||||||||||||||||||||||||    
T  6931677 atacagtcaaattaagcaaagaagttaggttaaatc 6931712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 184 - 322
Target Start/End: Original strand, 17838145 - 17838282
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||  ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  17838145 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaataggggta 17838243  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    |||  ||||||||||||||||||||||||||||||||||    
T  17838244 atacagtaaaattaagcaaagaagttaggttaaatctag 17838282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 10874770 - 10874634
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| |  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||    
T  10874770 atttgtttagtaaaattaaggagaaaaattagaaacgatttgtttattttgatctccctaacaattaacgttaacattttgattaaattaaataggctta 10874671  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatct 320  Q
    |||   |||||||||||||||||||||||||||||||    
T  10874670 atacaataaaattaagcaaagaagttaggttaaatct 10874634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 9542974 - 9542860
Alignment:
Q  211 attaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagtta 310  Q
    |||||||| ||||||||||||||||||||||||| ||||||  | |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  9542974 attaggagcgatttgtttattttgatttccctaaaaattaatgtgaacattttgattaaattaaatagggttaataccgtaaaattaagcaaagaagtta 9542875  T
Q  311 ggttaaatctagggc 325  Q
    |||||||||||||||    
T  9542874 ggttaaatctagggc 9542860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 15783430 - 15783546
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| ||  ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  15783430 atttgtttagtaaaattaaggagaaaaattagaagcaatttgttcattttgatttccctaataattaacattaatattttgattaaattaaataggatta 15783529  T
Q  284 atattgtaaaattaagc 300  Q
    |||| ||||| ||||||    
T  15783530 atatagtaaatttaagc 15783546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 28609602 - 28609757
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||  ||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||              |    
T  28609602 atttgtttagtaaaattaaagagaaaaattagaagcaatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggata 28609701  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  28609702 attaaatagggttaatatagtaaaattaagcaaagaagttaggttaaatctagggc 28609757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 44940852 - 44940701
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaatta---------- 273  Q
    ||||||| |||||||||||  |||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  44940852 atttgttcagcaaaattaaagagaaaagttaggaacgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataaggtta 44940753  T
Q  274 ----aataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
        |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  44940752 attaaatagggttaatatcgtaaaattaagcaaagaagttaggttaaatcta 44940701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 6931055 - 6931146
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6931055 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 6931146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 18091719 - 18091618
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| |||    
T  18091719 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaatattttgattaaattaaacagggtta 18091620  T
Q  284 at 285  Q
    ||    
T  18091619 at 18091618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 25235298 - 25235197
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||    
T  25235298 atttgtttagtaaaattaaggagaaaaattagaagcgatttttttatttttatttccctaacaattaacattaacattttgattaaattaagtagggtta 25235199  T
Q  284 at 285  Q
    ||    
T  25235198 at 25235197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 32676652 - 32676551
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  32676652 atttgtttagtaaaattaaagtgaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 32676553  T
Q  284 at 285  Q
    ||    
T  32676552 at 32676551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 42781597 - 42781698
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  42781597 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggtta 42781696  T
Q  284 at 285  Q
    ||    
T  42781697 at 42781698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 1513231 - 1513139
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccc-taacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  1513231 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttcccttaacaattaacgttaacattttgattaaattaaa 1513139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 1513878 - 1513723
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||                
T  1513878 atttgtttagtaaaattaaagagaaaaattaggaccgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacatggtta 1513779  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
      |||||||| ||||||  ||||||||||||||| |||||||||||||||||||||    
T  1513778 attaaatagggttaatacagtaaaattaagcaaataagttaggttaaatctagggc 1513723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 4290674 - 4290573
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  4290674 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 4290575  T
Q  284 at 285  Q
    ||    
T  4290574 at 4290573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 28608871 - 28609026
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||              |    
T  28608871 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgattttcctaataattaacgttaacattttgattaaattaaacagggtta 28608970  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  28608971 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 28609026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 9543641 - 9543540
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||  |||||||||| |||||||    
T  9543641 atttgtttagtaaatttaaaaagaaaaattaggagcgatttgtttattttgatttcactaacaattaacgttaacattttatttaaattaaacaggatta 9543542  T
Q  284 at 285  Q
    ||    
T  9543541 at 9543540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 19487191 - 19487346
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaa-------------- 269  Q
    |||||||||| ||||||||  | |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||                  
T  19487191 atttgtttagtaaaattaaagataaaaattaggagcgatttatttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggttg 19487290  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  19487291 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaattctagggc 19487346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 19485306 - 19485215
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  ||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  19485306 atttgtttagtaaaattaaagagaaaaattagcagcgatttgtttattttgattttcctaacaattaacgttaacattttgatcaaattaaa 19485215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 32676128 - 32676034
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatagg 279  Q
    |||||||||  ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  32676128 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt-attttaatttccctaacaattaacgttaatattttgattaaattaaatagg 32676034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 25235456 - 25235403
Alignment:
Q  183 gatttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgat 236  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  25235456 gatttgtttagtaaaattaagcagaaaaattaggagtgatttgtttaatttgat 25235403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 1501719 - 1501663
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||    
T  1501719 aattaaatagggttaatacagtaaaattaagcaaagaagttatgttaaatctagggc 1501663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 19485207 - 19485152
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||| |||||||    
T  19485207 aattaaatagggttaatacagtaaaattaagcaaagaagttaggttaattctaggg 19485152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 25235199 - 25235145
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||    
T  25235199 aattaaatagggttaatatagtaaaattaaacaaagaagttaagttaaatctagg 25235145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 25235396 - 25235322
Alignment:
Q  221 atttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagca 301  Q
    |||||||||||||||||||| ||||      |||||| |||||| |||||||||||||| ||||||| |||||||||||||    
T  25235396 atttgtttattttgatttccataac------cattaatattttgtttaaattaaatagggttaatatagtaaaattaagca 25235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 18091620 - 18091564
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  ||||||||||| |||||||||| ||||||||||||||    
T  18091620 aattaaatagggttaatacagtaaaattaagaaaagaagttatgttaaatctagggc 18091564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 32676553 - 32676497
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||| |||||||||||||||| |||||||||    
T  32676553 aattaaatagggttaatacagtaaaattaaacaaagaagttaggttacatctagggc 32676497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 1501625 - 1501570
Alignment:
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  ||||||||||||||| |||||| ||||||||||||||    
T  1501625 attaaatagggttaatacagtaaaattaagcaaaaaagttaagttaaatctagggc 1501570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 9543521 - 9543486
Alignment:
Q  290 taaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  9543521 taaaattaagcaaagaagttaggttaaatctagggc 9543486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 692907 - 692977
Alignment:
Q  255 taacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||  |||||  |||||||||| ||   || ||||||||||||||||||    
T  692907 taacattttgattaaattaaataggggtaatacagtaaaattaatcattaaaattaggttaaatctagggc 692977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 4290555 - 4290521
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  4290555 gtaaaattaagcaaagaagttaggttaaatctagg 4290521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 23456394 - 23456453
Alignment:
Q  220 gatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||||||||||||||| |||||      ||||||||||||||||||||||||| |||||||    
T  23456394 gatttgtttattttgatttccataaca------attaacattttgattaaattaaatatgattaat 23456453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 8909629 - 8909661
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  8909629 aaaatagggtaattagtttagtttaggtttcat 8909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 15783154 - 15783186
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  15783154 aaaatagggtaattagtttagtttaggtttcat 15783186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 25234774 - 25234722
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||| |||| || |||||||| || |||||||||||||||||||||    
T  25234774 aattaaatagggttaaaatagtaaaattcaggaaagaagttaggttaaatcta 25234722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 25234879 - 25234823
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||| | |||| || ||||||| ||| |||||||||||||||||||||||||    
T  25234879 aattaaatatggttaaaatagtaaaatgaagaaaagaagttaggttaaatctagggc 25234823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 25234991 - 25234939
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||| |||| || |||||||| | ||||||||||||||||||||||    
T  25234991 aattaaatagggttaaaatagtaaaattcaacaaagaagttaggttaaatcta 25234939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 6931175 - 6931210
Alignment:
Q  290 taaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||| |||||||||||||||||||||    
T  6931175 taaaattaagcaaaaaagttaggttaaatctagggc 6931210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 25234564 - 25234510
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||||||||| |||| || ||||||||||||||| || ||| ||||||||||||    
T  25234564 aattaaatagggttaaaatagtaaaattaagcaaataaattacgttaaatctagg 25234510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 1378735 - 1378678
Alignment:
Q  266 ttaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    ||||||||||||||  |||||| |||||||||| ||   |||||||||||||||||||    
T  1378735 ttaaattaaataggggtaatatagtaaaattaatcattaaagttaggttaaatctagg 1378678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 8909500 - 8909529
Alignment:
Q  41 aaaatagggtaattagtttagtttaggttt 70  Q
    ||||||||||||||||||||||||||||||    
T  8909500 aaaatagggtaattagtttagtttaggttt 8909529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 321
Target Start/End: Complemental strand, 25235065 - 25235036
Alignment:
Q  292 aaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||||||||||||||||||||||    
T  25235065 aaattaagcaaagaagttaggttaaatcta 25235036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 318
Target Start/End: Complemental strand, 32676010 - 32675981
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaat 318  Q
    ||||||||||||||||||||||||||||||    
T  32676010 gtaaaattaagcaaagaagttaggttaaat 32675981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 1379532 - 1379500
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||| ||||||    
T  1379532 aaaatagggtaattagtttagtttagatttcat 1379500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 42781716 - 42781752
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||| | ||||||    
T  42781716 gtaaaattaagcaaagaagttaggttaattatagggc 42781752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 9e-55; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 189 - 325
Target Start/End: Original strand, 4893643 - 4893779
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |    
T  4893643 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatact 4893742  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  4893743 gtaaaattaagcaaagaagttaggttaaatctagggc 4893779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 189 - 325
Target Start/End: Complemental strand, 29184844 - 29184708
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |    
T  29184844 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatact 29184745  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  29184744 gtaaaattaagcaaagaagttaggttaaatctagggc 29184708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 38896485 - 38896626
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  38896485 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 38896584  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  38896585 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 38896626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 1828109 - 1828248
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| | |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1828109 atttgtttagtaaaattaaggataaaaattaggagcgatttgtt-attttgatttccctaacaattaacattaacattttgattaaattaaatagggtta 1828207  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  1828208 atacagtaaaattaagcaaagaagttaggttaaatctaggg 1828248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 189 - 325
Target Start/End: Complemental strand, 19320787 - 19320651
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||      
T  19320787 tttagtaaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaataca 19320688  T
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  19320687 gtaaaattaagcaaagaagttaggttaaatctagggc 19320651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 33363253 - 33363383
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  33363253 aaaattaaggagataaattaggagctatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatactgtaaaa 33363352  T
Q  295 ttaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||    
T  33363353 ttaagcaaagaagttaggttaaatctagggc 33363383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 5427253 - 5427394
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  5427253 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 5427352  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||   ||||||||||||||||||||||||||||||||||||    
T  5427353 atacaataaaattaagcaaagaagttaggttaaatctagggc 5427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 47137528 - 47137669
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  47137528 atttttttagtaaaattaaggagaaaaattaggagctatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 47137627  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||| |||||||||||||||||||||||||||    
T  47137628 atacagtaaaattaggcaaagaagttaggttaaatctagggc 47137669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 46623748 - 46623612
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  46623748 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatctccctaacaattaacgttaacattttgattaaattaaataggatta 46623649  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatct 320  Q
    |||   |||||||||||||||||||||||||||||||    
T  46623648 atacaataaaattaagcaaagaagttaggttaaatct 46623612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 1375653 - 1375792
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||  ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  1375653 atttgtttaataaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaataggggta 1375751  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  1375752 atacagtaaaattaagcaaagaagttaggttaaatctaggg 1375792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 50563142 - 50563281
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||    
T  50563142 atttgtttagtaaaattaaggagaaaaattaagagaaatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatatggtta 50563241  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||  |||||||||| ||||||||||||||||||||||||    
T  50563242 atacagtaaaattaaacaaagaagttaggttaaatctagg 50563281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 47136810 - 47136940
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||    
T  47136810 aaaattaaagagaaaaattaggagcgatttgtttatattgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatacagtaaaa 47136909  T
Q  295 ttaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||| ||||||||||||||    
T  47136910 ttaagcaaagaagttatgttaaatctagggc 47136940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 46624478 - 46624337
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  46624478 atttttttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 46624379  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    | |  ||||||||||||||||||||||| |||| ||||||||    
T  46624378 acacggtaaaattaagcaaagaagttagattaattctagggc 46624337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 184 - 311
Target Start/End: Complemental strand, 33373665 - 33373538
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||    
T  33373665 atttgtttagtaaaattaaggagaaaaattaagaacgatttgtttattttgatttccctaacaattaacattaacattttcattaaattaagtagggtta 33373566  T
Q  284 atattgtaaaattaagcaaagaagttag 311  Q
    |||| |||||||||||||||||||||||    
T  33373565 atatagtaaaattaagcaaagaagttag 33373538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 198 - 324
Target Start/End: Complemental strand, 22194824 - 22194699
Alignment:
Q  198 attaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaatta 297  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||  |||||||||    
T  22194824 attaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaataggggtaatacagtaaaatta 22194726  T
Q  298 agcaaagaagttaggttaaatctaggg 324  Q
    |||||||||||||||||||||||||||    
T  22194725 agcaaagaagttaggttaaatctaggg 22194699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 5427985 - 5428122
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  5427985 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 5428084  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  ||||||||||||| |||| ||| ||||||||||    
T  5428085 atacagtaaaattaagcagagaaattatgttaaatcta 5428122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 38895745 - 38895886
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||  |||    
T  38895745 atttgtttagtaaaattaaggagaaaaattagaagcgatttgttcattttgatttccctaacaattaacgttaacattttgattaaattaaatagtgtta 38895844  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||   |||||||||| |||||||||||||||| ||||||||    
T  38895845 atacaataaaattaagtaaagaagttaggttaattctagggc 38895886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 52311893 - 52312034
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | |||    
T  52311893 atttatttagtaaaattaaggagaaaaattaggtgcgatttgtttattttgatttccttaacaattaacgttaacattttgattaaattaaataaggtta 52311992  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  | ||||||||||||||||||||| |||||||||||||    
T  52311993 atacaggaaaattaagcaaagaagttagtttaaatctagggc 52312034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 33074602 - 33074463
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||  ||||||||| ||||||||| |||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||  ||    
T  33074602 atttgtttaataaaattaaggagaaaaatttggagcgatttgtt-attttgatttccctaacaattaaagttaacattttgattaaattaaataggggta 33074504  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  33074503 atacagtaaaattaagcaaagaagttaggttaaatctaggg 33074463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 51964834 - 51964696
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||  ||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| |||    
T  51964834 atttgtttaataaaattaaagagaaaaattaggagcgatttgtttattttgatttcc-taacaattaacgttaatattttgattaaattaaatagggtta 51964736  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||   ||||||||||||||||||||||||||||||||||    
T  51964735 atacaataaaattaagcaaagaagttaggttaaatctagg 51964696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 28572817 - 28572950
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  28572817 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaactaacgttaacattttgattaaattaaatagggtta 28572915  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    ||   ||||||||||||||| ||||||||||||||    
T  28572916 atgcagtaaaattaagcaaataagttaggttaaat 28572950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 21056254 - 21056124
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||      ||||||||||||||||||||||  ||    
T  21056254 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgatttccataacaattaa------cattttgattaaattaaatagg-gta 21056162  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  21056161 atatagtaaaattaagcaaagaagctaggttaaatcta 21056124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 1827371 - 1827472
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  1827371 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaacagggtta 1827470  T
Q  284 at 285  Q
    ||    
T  1827471 at 1827472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 20130618 - 20130746
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| |||| |||| |||||||||||||| | ||||||||||||||||||| || ||||||      |||||||||||||||||||||||||||    
T  20130618 atttgtttagtaaaactaaggagaaaaattaggagagttttgtttattttgatttccata-caatta------acattttgattaaattaaataggatta 20130710  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatc 319  Q
    |||| |||||||||||||||||||||||||||||||    
T  20130711 atatagtaaaattaagcaaagaagttaggttaaatc 20130746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 170 - 285
Target Start/End: Original strand, 28950618 - 28950734
Alignment:
Q  170 gataagaataggag-atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta 268  Q
    |||||||||||||| |||||||||| ||||||||| | || ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28950618 gataagaataggaggatttgtttagtaaaattaaggaaaacaattaggagcgatttgtttattttgatttccctaacaattaactttaacattttgatta 28950717  T
Q  269 aattaaataggattaat 285  Q
    |||||| |||| |||||    
T  28950718 aattaagtagggttaat 28950734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 16301209 - 16301310
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  16301209 atttgtttagtaaaattaaaaagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 16301308  T
Q  284 at 285  Q
    ||    
T  16301309 at 16301310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 19321425 - 19321270
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taa 269  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||              | |    
T  19321425 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacagggtta 19321326  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  19321325 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 19321270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 49586833 - 49586971
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  ||||||| |||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||    
T  49586833 atttgtttagtaaaattaaagagaaaaactaggaacgatttgtttattttgatttctctaacaattaacgttaacattttgattaaattaaatagggtta 49586932  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||  | ||| |||||||||||||| ||||||    
T  49586933 atacagtaaaatt--gtaaa-aagttaggttaaatttagggc 49586971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 33075122 - 33074967
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||                
T  33075122 atttgtttagtaaaattaaagtgaaaaattaggagcgatttgtttattttgatttccctaacaattaatgttaacattttgattaaattaaacagggtta 33075023  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
      |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||    
T  33075022 attaaatagggttaatatagtaaaattaagcaaagaagttaggttacatctagggc 33074967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 28571326 - 28571417
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  28571326 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaaagttaacattttgattaaattaaa 28571417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 28572080 - 28572170
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  28572080 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 28572170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 4892361 - 4892462
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  4892361 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 4892460  T
Q  284 at 285  Q
    ||    
T  4892461 at 4892462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 29186126 - 29186025
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  29186126 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 29186027  T
Q  284 at 285  Q
    ||    
T  29186026 at 29186025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 22198371 - 22198217
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||| ||||| ||||||||   ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||                
T  22198371 atttttttagtaaaattaaagtgaaaaattaggagcgatttttttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 22198272  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
      |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  22198271 attaaatagggttaatatagtaaaattaagcaaagaagttaggttacatctaggg 22198217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 16301798 - 16301891
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaata 277  Q
    |||||||||| ||||||||  ||||||||| || | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  16301798 atttgtttagtaaaattaaaaagaaaaatttggggcgatttgtttattttgattttcctaacaattaacgttaacattttgattaaattaaata 16301891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 33361964 - 33362064
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  33361964 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttaatttccctaacaattaacgttaacattttatttaaattaaacaggatta 33362063  T
Q  284 a 284  Q
    |    
T  33362064 a 33362064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 50562325 - 50562480
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||| |||| || |||||||||| |||||||||||||||              |    
T  50562325 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttaatttaccaaacaattaacgttaacattttgattaaattaaacaaggtta 50562424  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||| ||||||    
T  50562425 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatatagggc 50562480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 35599433 - 35599365
Alignment:
Q  253 attaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||    
T  35599433 attaacattttgattaaattaaatagggttaatataataaaattaagcaaagaaattaggttaaatcta 35599365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 35598869 - 35598774
Alignment:
Q  220 gatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatc 319  Q
    |||| |||||||||||||||| |||||||||||||       |||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  35598869 gattagtttattttgatttccataacaattaacatc------ttgattcaattaaatagggttaatatagtaaaattaagcaaataagttaggttaaatc 35598776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 24289522 - 24289453
Alignment:
Q  249 taacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||| |||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||    
T  24289522 taacgttaacattttgattaaattaaatagggttaatacagtaaaattaagcaaataagttaggttaaat 24289453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 52311204 - 52311260
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  52311204 aattaaatagggttaatatagtaaaattaagcaaagaagttaggttaaatctagggc 52311260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 8256628 - 8256533
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||   ||||||||||||| ||||||||||||||||||||| ||||||||||      |||||||||||||||||||||| |||    
T  8256628 atttatttagtaaaattaaagggaaaaattaggagcgatttgtttattttgatttccataacaattaa------cattttgattaaattaaatagggtta 8256535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 33375406 - 33375357
Alignment:
Q  187 tgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgat 236  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  33375406 tgtttagtaaaattaagcagaaaaattaggagtgatttgtttattttgat 33375357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 52311111 - 52311171
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaa 244  Q
    |||||||||| ||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  52311111 atttgtttagtaaaattaaagagaaagattaggagcgatttgtttattttgatttccctaa 52311171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 4892480 - 4892514
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  4892480 gtaaaattaagcaaagaagttaggttaaatctagg 4892514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 29186007 - 29185973
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  29186007 gtaaaattaagcaaagaagttaggttaaatctagg 29185973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 33362083 - 33362117
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  33362083 gtaaaattaagcaaagaagttaggttaaatctagg 33362117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 20089318 - 20089350
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  20089318 aaaatagggtaattagtttagtttaggtttcat 20089350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 28571437 - 28571481
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  28571437 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 28571481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 35593703 - 35593663
Alignment:
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  35593703 atatagtaaaattaaggaaagaagttaggttaaatctaggg 35593663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 324
Target Start/End: Original strand, 1827490 - 1827525
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||||||||| |||||||||||||||||||||||||    
T  1827490 gtaaaattaaacaaagaagttaggttaaatctaggg 1827525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Complemental strand, 8256523 - 8256487
Alignment:
Q  282 taatattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  8256523 taatatagtaaaattaagcaaagaagctaggttaaat 8256487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 9754432 - 9754400
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||| ||||||||||||||||||||||||||||    
T  9754432 aaaaaagggtaattagtttagtttaggtttcat 9754400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 16301328 - 16301360
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||||||| |||||||||||||||||    
T  16301328 gtaaaattaagcaaataagttaggttaaatcta 16301360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 16301909 - 16301953
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  ||||||||||||||||||||| | |||||||||||||    
T  16301909 ttaatacagtaaaattaagcaaagaagtttgattaaatctagggc 16301953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 20130854 - 20130882
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtt 69  Q
    |||||||||||||||||||||||||||||    
T  20130854 aaaatagggtaattagtttagtttaggtt 20130882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 28572188 - 28572224
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||| | ||||||||||||||||    
T  28572188 gtaaaattaagcaaagaaataaggttaaatctagggc 28572224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 35598340 - 35598308
Alignment:
Q  253 attaacattttgattaaattaaataggattaat 285  Q
    ||||||||||||||||||||||||||| |||||    
T  35598340 attaacattttgattaaattaaatagggttaat 35598308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 55229 - 55368
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  55229 atttgtttagtaaaattaaggagaaaaattatgtgtgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 55328  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||  |||||||||||||||||||||||||||||||||||    
T  55329 atacagtaaaattaagcaaagaagttaggttaaatctagg 55368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 26387 - 26257
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  26387 aaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatactgtaaaa 26288  T
Q  295 ttaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||    
T  26287 ttaagcaaagaagttaggttaaatctagggc 26257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 14329 - 14459
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  14329 aaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatactgtaaaa 14428  T
Q  295 ttaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||    
T  14429 ttaagcaaagaagttaggttaaatctagggc 14459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 18375918 - 18375788
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  18375918 aaaattaaggagataaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatactgtaaaa 18375819  T
Q  295 ttaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||||||||||||||||    
T  18375818 ttaagcaaagaagttaggttaaatctagggc 18375788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 9473793 - 9473934
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  9473793 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 9473892  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  9473893 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 9473934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 25361185 - 25361319
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  25361185 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 25361284  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||  ||||||||||||||||||||||||||||||    
T  25361285 atacagtaaaattaagcaaagaagttaggttaaat 25361319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 24055510 - 24055651
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||    
T  24055510 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttaattaaattaaatagggtta 24055609  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  24055610 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 24055651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 25618871 - 25618730
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | | |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  25618871 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtttattttgatttccctaacaatttacgttaacattttgattaaattaaatagggtta 25618772  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  25618771 atacagtaaaattaagcaaagaagttaggttaaatctagggc 25618730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 36778150 - 36778291
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||| ||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  36778150 atttgtatagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 36778249  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  36778250 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 36778291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 40586813 - 40586672
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  40586813 atttgtttagtaaaattaaggagaaaaattagaagcgatttgttcattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 40586714  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  40586713 atacagtaaaattaagcaaagaagttaggttaaatcttgggc 40586672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 8762684 - 8762823
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  8762684 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 8762782  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  8762783 atacagtaaaattaagcaaataagttaggttaaatctaggg 8762823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 44381084 - 44380946
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    ||||| |||| ||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  44381084 atttgcttagtaaaattaaggagaaaaattaggagcgatttgtttagtttgatttccgtaacaattaacattaacattttgattaaattaaatagggtta 44380985  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    |||  ||||||||||||||| ||||||||||||||||||    
T  44380984 atacagtaaaattaagcaaaaaagttaggttaaatctag 44380946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 1944859 - 1944998
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  1944859 atttgtttagtaaaattaaggagaaaaattaggaacgattt-tttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 1944957  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  1944958 atacagtaaaattaagcaaataagttaggttaaatctaggg 1944998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 25834368 - 25834229
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  25834368 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 25834270  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    ||   ||||||||||||||| ||||||||||||||||||||    
T  25834269 atgcagtaaaattaagcaaataagttaggttaaatctaggg 25834229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 42244707 - 42244571
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||| ||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||    
T  42244707 atttttttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttgacattttgattaaattaaatagggtta 42244608  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatct 320  Q
    |||  ||||||||||||||||||||||||||||||||    
T  42244607 atacagtaaaattaagcaaagaagttaggttaaatct 42244571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 7390988 - 7391125
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| | | ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||    
T  7390988 atttgtttagtaaaattaaggagaaaaattatgtgcgatttgtttattttgatttccctaataattaacgttaacattttgattaaattaaatagggtta 7391087  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  |||||||||||||||||||||| ||||||||||    
T  7391088 atacagtaaaattaagcaaagaagttaagttaaatcta 7391125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 25345664 - 25345805
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||| |||   | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||    
T  25345664 atttgtttagtaaaattaaggagaaaatttatttgcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagtgtta 25345763  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  |||||||||||||||||||||||||||||||||||||    
T  25345764 atacagtaaaattaagcaaagaagttaggttaaatctagggc 25345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 181 - 318
Target Start/End: Original strand, 34894077 - 34894214
Alignment:
Q  181 gagatttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaatagga 280  Q
    ||||||||||||| ||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||      
T  34894077 gagatttgtttagtaaaattaaggagaaaaattatgagcgatttgttcattttgatttccctaacaattaacattaagattttgattaaattaaatagtg 34894176  T
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaat 318  Q
    ||||||| ||||| |||||||| ||| |||||||||||    
T  34894177 ttaatatagtaaatttaagcaaggaaattaggttaaat 34894214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 41158317 - 41158455
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||||||| ||  |||||||||||||||||||||| |||    
T  41158317 atttgtttagtaaaattaaggagaaaaattatgagcgatttgtttattttgatttccctaa-aattaacgtt--cattttgattaaattaaatagggtta 41158413  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||   |||||||||||||||||||||||||||||||||||||    
T  41158414 atgcagtaaaattaagcaaagaagttaggttaaatctagggc 41158455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 4464726 - 4464589
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    ||||| |||| ||||||||| |||||||||| | | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||    
T  4464726 atttgattagtaaaattaaggagaaaaattatgtgcgatttgtttattttgatttccctaccaattaacgttaacattttgattaaattaaatagggtta 4464627  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||  ||||||||||||| |||||||| ||||||||||    
T  4464626 atacagtaaaattaagcagagaagttatgttaaatcta 4464589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 324
Target Start/End: Complemental strand, 8160788 - 8160651
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  8160788 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaacaactaacgttaacattttgattaaattaaatagggtta 8160690  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
      ||  |||||||||||||| ||||||||||||||||||||    
T  8160689 --atgctaaaattaagcaaataagttaggttaaatctaggg 8160651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 41532140 - 41532000
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||| || ||||||| ||||||||||||| | |||    
T  41532140 atttgtttagtaaaattaaggagaaaaattaggagcgattt-tttatgttgatttccctaacaattaacgtttacattttaattaaattaaataaggtta 41532042  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||   ||||||||||||||||||||||||||||| ||||||    
T  41532041 atacaataaaattaagcaaagaagttaggttaaatttagggc 41532000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 41157581 - 41157682
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  41157581 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggtta 41157680  T
Q  284 at 285  Q
    ||    
T  41157681 at 41157682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 4465470 - 4465315
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||| ||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||                
T  4465470 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacatggtta 4465371  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
      |||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  4465370 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 4465315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 7390240 - 7390395
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------a 269  Q
    |||||||||| ||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||              |    
T  7390240 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 7390339  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  7390340 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatctagggc 7390395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 1943369 - 1943460
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1943369 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 1943460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 8162260 - 8162169
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8162260 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 8162169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 8761304 - 8761395
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8761304 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 8761395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 25835748 - 25835657
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25835748 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 25835657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 321
Target Start/End: Original strand, 38295306 - 38295426
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| |||||||||||||| || ||||||| |||||||||| |||||||||      ||||||||||||||||||||||| ||||||| ||||||    
T  38295306 aaaattaaggagaaaaattaggagcgaattgtttactttgatttccataacaatta------acattttgattaaattaaatagggttaatatagtaaaa 38295399  T
Q  295 ttaagcaaagaagttaggttaaatcta 321  Q
    || ||||||||||||||||||||||||    
T  38295400 ttcagcaaagaagttaggttaaatcta 38295426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 41978515 - 41978616
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  41978515 atttgtttagtaaaattaaagagaaaaattatgagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 41978614  T
Q  284 at 285  Q
    ||    
T  41978615 at 41978616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 44381785 - 44381684
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |||    
T  44381785 atttgtttagtaaaattaaggagaaaaattaggaccgatttgtttattttgatatccctaacaattaacgttaacattttgattaaattaaacaggttta 44381686  T
Q  284 at 285  Q
    ||    
T  44381685 at 44381684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 36777511 - 36777666
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgat--------------taa 269  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||              | |    
T  36777511 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaacatggtta 36777610  T
Q  270 attaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  36777611 attaaatagggttaatacagtaaaattaagcaaagaagttaggttaattctagggc 36777666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 32846132 - 32846223
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32846132 atttgtttagtaaaattaaagaaaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 32846223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 1944123 - 1944213
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  1944123 aaaattaaagagaaaaattaagagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaat 1944213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 8161506 - 8161416
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  8161506 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 8161416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 8761947 - 8762037
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  8761947 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 8762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 25835105 - 25835015
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||    
T  25835105 aaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggttaat 25835015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 12761160 - 12761261
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| ||| |||    
T  12761160 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgattttcctaacaattaacgttaacattttaattaaattaaacagggtta 12761259  T
Q  284 at 285  Q
    ||    
T  12761260 at 12761261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 34894267 - 34894359
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaata 277  Q
    |||||||||| ||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34894267 atttgtttagtaaaattaaggagaaaaattaggagcgatt-gttcattttgatttccctaacaattaacattaaaattttgattaaattaaata 34894359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 32844754 - 32844846
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaaca-ttttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  32844754 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacatttttgattaaattaaa 32844846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 41532832 - 41532741
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  ||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41532832 atttgtttagtaaaattaaagagaaaaattagaaacgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaa 41532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 32845510 - 32845600
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||||||  |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||    
T  32845510 aaaattaaagagaaaaattaggagcgatttgtttattttgatttctctaacaattaacgttaacattttgattaaattaaacagggttaat 32845600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 25619774 - 25619679
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    ||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||    
T  25619774 tttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaaca-ttcgattaaattaaacagggttaat 25619679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 32846880 - 32847006
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||             ||||||||||||||||||||| |||    
T  32846880 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtt-attttgatttccctaac-------------attttgattaaattaaatagggtta 32846965  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  32846966 atacagtaaaattaagcaaataagttaggttaaatctaggg 32847006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 37588423 - 37588351
Alignment:
Q  253 attaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||    
T  37588423 attaacattttgattaaattaaatagggttaatatagtaaaattaagcaaaggagttaggttaaatctagggc 37588351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 9473155 - 9473246
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  9473155 atttgtttagtaaaattaaagagaaaaattaggaacgatttgtttattttgatttcccgaacaattaacgttaacattttgatcaaattaaa 9473246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 34894565 - 34894626
Alignment:
Q  264 gattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||    
T  34894565 gattaaattaaatagggttaatatagtaaatttaagcaaagaagttaggttaaatctagggc 34894626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 34894770 - 34894895
Alignment:
Q  204 tagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacatt---ttgatta-----aattaaataggattaatattgtaaaat 295  Q
    |||||||||||||||  ||||||| |||||||||||| ||||||||||||||   |||   || | ||     ||||||||||| ||||||| ||||| |    
T  34894770 tagaaaaattaggagcaatttgttcattttgatttccataacaattaacattttgattaaattaaatatgattaattaaatagggttaatatagtaaatt 34894869  T
Q  296 taagcaaagaagttaggttaaatcta 321  Q
    ||| ||||||||||||||||||||||    
T  34894870 taaacaaagaagttaggttaaatcta 34894895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 34894679 - 34894736
Alignment:
Q  204 tagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacatt 261  Q
    ||||||||| |||||  ||||||| |||||||||||| ||||||||||||||||||||    
T  34894679 tagaaaaatgaggagcaatttgttcattttgatttccataacaattaacattaacatt 34894736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 44428981 - 44428940
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgat 236  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  44428981 aaaattaagtagaaaaattaggagtgatttatttattttgat 44428940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 8161418 - 8161362
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||| | ||||||||||||||||    
T  8161418 aattaaatagggttaatacagtaaaattaagcaaagaaataaggttaaatctagggc 8161362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 25835017 - 25834961
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||  |||||||||||||||||| | ||||||||||||||||    
T  25835017 aattaaatagggttaatacagtaaaattaagcaaagaaataaggttaaatctagggc 25834961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 41532733 - 41532681
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||| ||||||  ||||||||||||||| |||||||||||||||||    
T  41532733 aattaaatagggttaatacagtaaaattaagcaaaaaagttaggttaaatcta 41532681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 44381686 - 44381634
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||| ||||||  |||||||||||||||||| ||||||||||||||    
T  44381686 aattaaatagggttaatacagtaaaattaagcaaagaaattaggttaaatcta 44381634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 25346612 - 25346667
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttc 239  Q
    |||||||||| ||||||||  ||||||||||||||  |||||||||||||||||||    
T  25346612 atttgtttagtaaaattaaagagaaaaattaggagatatttgtttattttgatttc 25346667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 37588142 - 37588080
Alignment:
Q  259 attttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||||||||||| | |||||||  |||||||||| |||  ||||||||||||||||    
T  37588142 attttgattaaattaaataaggttaatataataaaattaagaaaaagagttaggttaaatcta 37588080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 1943480 - 1943524
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  1943480 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 1943524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 8162141 - 8162105
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| ||||||||||||||||||||||||||||||||    
T  8162141 gtaagattaagcaaagaagttaggttaaatctagggc 8162105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 8761415 - 8761459
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  8761415 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 8761459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 25619681 - 25619629
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||| ||||||  ||||| ||||||||| |||||||||||||||||    
T  25619681 aattaaatagggttaatacagtaaacttaagcaaataagttaggttaaatcta 25619629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 25835629 - 25835593
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||| ||||||||||||||||||||||||||||||||    
T  25835629 gtaagattaagcaaagaagttaggttaaatctagggc 25835593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 32844866 - 32844910
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  32844866 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 32844910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 32846243 - 32846287
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  32846243 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 32846287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 33931072 - 33931040
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||||||||||    
T  33931072 aaaatagggtaattagtttagtttaggtttcat 33931040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 44428513 - 44428469
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggt 313  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||    
T  44428513 aattaaatatggttaatatagtaaaattaagcaaagaagttaggt 44428469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 44428879 - 44428811
Alignment:
Q  253 attaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    |||||||||||  | ||||||||||| |||||||| ||||||||||||| |||| ||| | ||||||||    
T  44428879 attaacatttttttaaaattaaatagaattaatatagtaaaattaagcagagaaattaaggtaaatcta 44428811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 37588236 - 37588181
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    ||||||||| | ||||||| ||||||||||| |||  |||||||||||||||||||    
T  37588236 aattaaatatggttaatatagtaaaattaagaaaatgagttaggttaaatctaggg 37588181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 44428582 - 44428529
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatt 237  Q
    |||||||||| ||||||||| |||||||||||||   |||| ||||||||||||    
T  44428582 atttgtttagtaaaattaaggagaaaaattaggaacaatttatttattttgatt 44428529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 1944231 - 1944267
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||| | ||||||||||||||||    
T  1944231 gtaaaattaagcaaagaaataaggttaaatctagggc 1944267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 8762055 - 8762091
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||| | ||||||||||||||||    
T  8762055 gtaaaattaagcaaagaaataaggttaaatctagggc 8762091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 12761279 - 12761315
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||| |||| |||||||||||||||||||||    
T  12761279 gtaaaattaaacaaacaagttaggttaaatctagggc 12761315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 18492766 - 18492798
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||||||||||||||||||||| ||||||    
T  18492766 aaaatagggtaattagtttagtttagctttcat 18492798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 18493017 - 18493049
Alignment:
Q  41 aaaatagggtaattagtttagtttaggtttcat 73  Q
    |||||||| ||||||||||||||||||||||||    
T  18493017 aaaataggataattagtttagtttaggtttcat 18493049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 32845618 - 32845654
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||||||||||||||||| | ||||||||||||||||    
T  32845618 gtaaaattaagcaaagaaataaggttaaatctagggc 32845654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 106; Significance: 5e-53; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 325
Target Start/End: Complemental strand, 8962 - 8821
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  8962 atttgtttagtaaaattaaggagaaaaattaggagtgatttgtttattttgatttctctaacaattaacattaacattttgattaaattaaatagggtta 8863  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    |||  ||||||||| |||||||| |||||| |||||||||||    
T  8862 atacagtaaaattatgcaaagaaattaggtcaaatctagggc 8821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 9713 - 9622
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||   ||||||||||||||||| ||||||||||||||||||||||    
T  9713 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttatttatttttccctaacaattaacgttaacattttgattaaattaaa 9622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 9614 - 9564
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatc 319  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  9614 aattaaatagggttaatacagtaaaattaagcaaagaagttaggttaaatc 9564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 324
Target Start/End: Original strand, 14682 - 14822
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||    
T  14682 atttgtttagtaaaattaaggagaaaaattaggagcgatttgtttattttgattttcctaacaattaacgttaacattttgattaaattaaatagggtta 14781  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |||  ||||||||||||||||||||||| ||||||||||||    
T  14782 atacagtaaaattaagcaaagaagttagcttaaatctaggg 14822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 3683 - 3821
Alignment:
Q  186 ttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    |||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||    
T  3683 ttgtttagtaaaattaaacagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgtttaaattaaacagggttaat 3782  T
Q  286 attgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |  |||||||||||||||||||||||||||||| |||||    
T  3783 acagtaaaattaagcaaagaagttaggttaaatttaggg 3821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 11423 - 11561
Alignment:
Q  186 ttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaat 285  Q
    |||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||    
T  11423 ttgtttagtaaaattaaacagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgtttaaattaaacagggttaat 11522  T
Q  286 attgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    |  |||||||||||||||||||||||||||||| |||||    
T  11523 acagtaaaattaagcaaagaagttaggttaaatttaggg 11561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 17768 - 17636
Alignment:
Q  189 tttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatatt 288  Q
    ||||| ||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |    
T  17768 tttagtaaaattaaggagataaattaggagcgatttgtctattttgatttccctaacaattaacgttaacattttgattaaattaaatagggttaatact 17669  T
Q  289 gtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||||||||||||||| |||||||||    
T  17668 gtaaaattaagcaaagaagttagattaaatcta 17636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 18406 - 18305
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||    
T  18406 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttatttaaattaaacaggatta 18307  T
Q  284 at 285  Q
    ||    
T  18306 at 18305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 18287 - 18253
Alignment:
Q  289 gtaaaattaagcaaagaagttaggttaaatctagg 323  Q
    |||||||||||||||||||||||||||||||||||    
T  18287 gtaaaattaagcaaagaagttaggttaaatctagg 18253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 8547 - 8413
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||    
T  8547 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaatttaatagggtta 8448  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaat 318  Q
    |||   |||||||||||||||||||||||||||||    
T  8447 atacaataaaattaagcaaagaagttaggttaaat 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 9179 - 9088
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  9179 atttgtttagtaaaattaaagagaaaaattaggagatatttgtttattttgatttccctaacaattaacgttaacattttgatcaaattaaa 9088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 9076 - 9024
Alignment:
Q  269 aattaaataggattaatattgtaaaattaagcaaagaagttaggttaaatcta 321  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  9076 aattaaataggattaatacagtaaaattaagcaaagaagttaggttaattcta 9024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 195 - 318
Target Start/End: Original strand, 10900 - 11022
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||  |||||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||   ||||||    
T  10900 aaaattaaagagaaaaattaggagcgatttgtt-attttgatttccctaacaactaacgttaacattttgattaaattaaatagggttaatgcagtaaaa 10998  T
Q  295 ttaagcaaagaagttaggttaaat 318  Q
    ||||||||| ||||||||||||||    
T  10999 ttaagcaaataagttaggttaaat 11022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 10146 - 10237
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaa 275  Q
    |||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10146 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaaagttaacattttgattaaattaaa 10237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 10257 - 10301
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||| ||||||||||||||||||||||||||||||||    
T  10257 ttaatacagtaagattaagcaaagaagttaggttaaatctagggc 10301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 3193 - 3075
Alignment:
Q  207 aaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaa 306  Q
    |||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||   |||||||||||| ||||    
T  3193 aaaaattaggagcgatttgtttattttgatttccgtagcaattaacgttaacattttgattaaattaaatagggttaatacaataaaattaagcatagaa 3094  T
Q  307 gttaggttaaatctagggc 325  Q
     ||||||||||| ||||||    
T  3093 attaggttaaatttagggc 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 3954 - 3802
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaat------------ 271  Q
    |||||||||  |||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  3954 atttgtttaataaaaataaaaagaaaaattaggagcgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaacagggtta 3855  T
Q  272 --taaataggattaatattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
      |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  3854 attaaatagggttaatatagtaaaattaagcaaagaagttaggttaaatctag 3802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 10403 - 10335
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaac 252  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  10403 atttgtttagtaaaattaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaac 10335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 4e-32; HSPs: 5)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 139259 - 139386
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||             
T  139259 atttgtttagtaaaattaaggagaaaaattagaagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaa--------- 139349  T
Q  284 atattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
         |||||||||||||||||||||||||||||||| ||||    
T  139350 -----gtaaaattaagcaaagaagttaggttaaatcttgggc 139386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 232234 - 232335
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggatta 283  Q
    |||||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  232234 atttgtttagtaaatttaaagagaaaaattaggagcgatttgtttattttgatttccctaacaattaacgttaacattttgattaaattaaacagggtta 232333  T
Q  284 at 285  Q
    ||    
T  232334 at 232335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 232867 - 232963
Alignment:
Q  184 atttgtttagcaaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaaca-ttttgattaaattaaatagg 279  Q
    |||||||||| | ||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  232867 atttgtttagtagaattatggagaaaaattaggagcgatttgtttattttgatttctctaacaattaacattaacatttttgattaaattaaatagg 232963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 232979 - 233020
Alignment:
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctag 322  Q
    ||||||  ||||||||||||||||||||||||||||||||||    
T  232979 ttaatacagtaaaattaagcaaagaagttaggttaaatctag 233020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 232356 - 232389
Alignment:
Q  292 aaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||||| ||||||||||||||||||||||    
T  232356 aaattaagcaaggaagttaggttaaatctagggc 232389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 195 - 321
Target Start/End: Original strand, 670 - 790
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaa 294  Q
    ||||||||| |||||||||||||| || ||||||| |||||||||| |||||||||      ||||||||||||||||||||| | ||||||| ||||||    
T  670 aaaattaaggagaaaaattaggagcgaattgtttactttgatttccataacaatta------acattttgattaaattaaatanggttaatatagtaaaa 763  T
Q  295 ttaagcaaagaagttaggttaaatcta 321  Q
    || ||||||||||||| ||||||||||    
T  764 ttcagcaaagaagttaagttaaatcta 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 638 - 782
Alignment:
Q  195 aaaattaagtagaaaaattaggagtgatttgtttattttgatttccctaacaattaacattaacattttgatta--------------aattaaatagga 280  Q
    ||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||              |||||||||||     
T  638 aaaattaaagagaaaaattaggagcgatttgtttatattgatttccctaacaattaacgttaacattttgattaaattaaacatggttaattaaataggg 737  T
Q  281 ttaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||  |||||||||||||||||||||| ||||||||||||||    
T  738 ttaatacagtaaaattaagcaaagaagttatgttaaatctagggc 782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 200881 - 200977
Alignment:
Q  215 ggagtgatttgtttattttgatttccctaacaattaacattaacattttgattaaattaaataggattaatattgtaaaattaagcaaagaagttaggtt 314  Q
    |||| |||||||||||||| |||||| |||||||||      ||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||| |||    
T  200881 ggagggatttgtttattttaatttccataacaatta------acattttgaataaattaaatagggttaatatagtaaaattaagcaaagaaattaagtt 200974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 20856 - 20810
Alignment:
Q  279 gattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||| ||||||||||||| |||| ||||| ||||||||||||    
T  20856 gattaatatagtaaaattaagcagagaaattagggtaaatctagggc 20810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 22523 - 22477
Alignment:
Q  279 gattaatattgtaaaattaagcaaagaagttaggttaaatctagggc 325  Q
    ||||||||| ||||||||||||| |||| ||||| ||||||||||||    
T  22523 gattaatatagtaaaattaagcagagaaattagggtaaatctagggc 22477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 33 - 82
Alignment:
Q  275 ataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    ||||| ||||||| ||||||||||||| |||| ||||| |||||||||||    
T  33 atagggttaatatagtaaaattaagcagagaaattagggtaaatctaggg 82  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 4317 - 4366
Alignment:
Q  275 ataggattaatattgtaaaattaagcaaagaagttaggttaaatctaggg 324  Q
    ||||| ||||||| ||||||||||||| |||| ||||| |||||||||||    
T  4317 atagggttaatatagtaaaattaagcagagaaattagggtaaatctaggg 4366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University