View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5022-Insertion-5 (Length: 673)

Name: NF5022-Insertion-5
Description: NF5022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5022-Insertion-5
NF5022-Insertion-5
[»] chr6 (1 HSPs)
chr6 (8-673)||(32823903-32824567)


Alignment Details
Target: chr6 (Bit Score: 598; Significance: 0; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 598; E-Value: 0
Query Start/End: Original strand, 8 - 673
Target Start/End: Complemental strand, 32824567 - 32823903
Alignment:
Q  8 tggtgtgtgtaagcaattaagatttatatatattgttttaaatattttattgatcagtgtatgaattaggatagttatatagaaagttcagaattgtttc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32824567 tggtgtgtgtaagcaattaagatttatatatattgttttaaatattttattgatcagtgtatgaattaggatagttatatagaaagttcagaattgtttc 32824468  T
Q  108 tggaaattgccaatgattatgaaaatagtagataacttgaagataatgtctcattgtcatatgagataaaatagtaaatattgataactttgttcgctca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  32824467 tggaaattgccaatgattatgaaaatagtagataacttgaagataatgtctcattgtcatatgagataaaatagtaaatattgataactttgtctgctca 32824368  T
Q  208 atatttaggataggaaggaacttgaagaaaaaattcctataatcttttctcaatctcttagttttagttttattttatgaacattcttcttctcttgtct 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  32824367 atatttaggataggaaggaacttgaagaaaaaattcctataatcttttctcaatctcttaattttaattttattttatgaacattcttcttctcttgtct 32824268  T
Q  308 gtatataaatgaatgtaacctttattctccaaacactcctaatcatctacatgatcttattctcgttgaaagagaaggatatgcgtttttatttaattta 407  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32824267 atatataaatgaatataacctttattctccaaacactcctaatcatctacatgatcttattctcgttgaaagagaaggatatgcgtttttatttaattta 32824168  T
Q  408 gagtctgaaatattgccatatttttgtacgcattgccaaaatataggtcattaagttgaaaatgttgaaaattgaaatctcaaaggtataaaccttcatg 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32824167 gagtctgaaatattgccatatttttgtacgcattgccaaaatataggtcattaagttgaaaatgttgaaaattgaaatctcaaaggtataaaccttcatg 32824068  T
Q  508 ttaattggagacgctctttctttacctatcacaaagtacacggtttgttatctttaagttcaactaaaatttctttaaagtctcccgacttagagtcatc 607  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||| ||||||||||||||||| |||||||||    
T  32824067 ttaatgggagacactctttctttacctatcacaaagtacacggtttgttat-tttaagttcaacaaatttttttttaaagtctcccgactcagagtcatc 32823969  T
Q  608 ttcttctaaaacttcaaaggaaacgaagttatcctttcttccttagagaattttggcactatttta 673  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  32823968 ttcttctaaaacttcaaaggaaacaaagttatcctttcttccttggagaattttggcactatttta 32823903  T

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