View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5022_low_30 (Length: 214)

Name: NF5022_low_30
Description: NF5022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5022_low_30
NF5022_low_30
[»] chr5 (29 HSPs)
chr5 (41-190)||(30072244-30072393)
chr5 (41-190)||(26329907-26330055)
chr5 (41-190)||(11274167-11274316)
chr5 (41-190)||(16622514-16622662)
chr5 (50-162)||(18452677-18452789)
chr5 (41-190)||(17027656-17027804)
chr5 (41-187)||(25594533-25594678)
chr5 (41-190)||(24841882-24842030)
chr5 (42-190)||(22229934-22230081)
chr5 (41-162)||(7742735-7742856)
chr5 (41-162)||(16634175-16634296)
chr5 (41-163)||(26070602-26070724)
chr5 (90-163)||(19763750-19763823)
chr5 (41-176)||(24517474-24517609)
chr5 (55-163)||(18178244-18178352)
chr5 (74-163)||(23157668-23157757)
chr5 (41-163)||(17381905-17382030)
chr5 (41-136)||(20694768-20694863)
chr5 (44-183)||(25680719-25680857)
chr5 (63-127)||(24410830-24410894)
chr5 (58-143)||(12339899-12339983)
chr5 (92-159)||(22643773-22643840)
chr5 (52-139)||(24130765-24130854)
chr5 (41-156)||(25367722-25367836)
chr5 (88-138)||(17695352-17695402)
chr5 (62-138)||(11997782-11997859)
chr5 (41-139)||(25075201-25075298)
chr5 (41-139)||(25133170-25133267)
chr5 (74-146)||(19331671-19331743)
[»] chr1 (34 HSPs)
chr1 (41-190)||(11769831-11769980)
chr1 (41-159)||(25494357-25494474)
chr1 (41-151)||(25727785-25727895)
chr1 (41-151)||(25736193-25736303)
chr1 (41-190)||(23519606-23519754)
chr1 (42-173)||(18300857-18300988)
chr1 (63-190)||(50047325-50047452)
chr1 (40-186)||(26657604-26657749)
chr1 (41-173)||(30675613-30675744)
chr1 (41-148)||(25730450-25730557)
chr1 (41-163)||(26854184-26854306)
chr1 (95-190)||(12423752-12423847)
chr1 (55-138)||(27461070-27461153)
chr1 (58-163)||(30781906-30782010)
chr1 (74-159)||(52271113-52271198)
chr1 (51-162)||(26102195-26102306)
chr1 (62-159)||(19257674-19257769)
chr1 (41-174)||(23223541-23223675)
chr1 (86-190)||(9328341-9328444)
chr1 (41-163)||(15298735-15298856)
chr1 (74-163)||(25373907-25373996)
chr1 (41-138)||(31313680-31313777)
chr1 (86-190)||(9353186-9353289)
chr1 (41-134)||(15416866-15416960)
chr1 (40-122)||(34381838-34381920)
chr1 (105-190)||(9252447-9252532)
chr1 (39-134)||(31319504-31319599)
chr1 (94-163)||(23505938-23506006)
chr1 (63-163)||(25126630-25126730)
chr1 (63-144)||(18391232-18391314)
chr1 (62-138)||(18795330-18795407)
chr1 (41-122)||(23521635-23521715)
chr1 (96-163)||(25665634-25665701)
chr1 (41-163)||(21548776-21548898)
[»] chr7 (42 HSPs)
chr7 (42-190)||(29544649-29544797)
chr7 (45-190)||(20470647-20470792)
chr7 (41-190)||(7494825-7494973)
chr7 (41-190)||(9801712-9801860)
chr7 (65-186)||(21545668-21545789)
chr7 (41-187)||(20017081-20017227)
chr7 (41-159)||(23125029-23125147)
chr7 (41-163)||(7142227-7142348)
chr7 (41-130)||(9761313-9761401)
chr7 (58-190)||(315319-315450)
chr7 (41-163)||(1074581-1074703)
chr7 (42-190)||(7815453-7815600)
chr7 (58-186)||(20446348-20446475)
chr7 (42-190)||(21471926-21472072)
chr7 (86-185)||(10670417-10670515)
chr7 (74-163)||(18496726-18496815)
chr7 (79-135)||(12358655-12358711)
chr7 (41-171)||(9070517-9070646)
chr7 (58-173)||(22067657-22067771)
chr7 (41-161)||(4977687-4977806)
chr7 (95-190)||(7493495-7493590)
chr7 (42-173)||(7777895-7778024)
chr7 (41-144)||(30405722-30405825)
chr7 (74-148)||(5312665-5312739)
chr7 (41-163)||(24596868-24596990)
chr7 (41-134)||(22532538-22532630)
chr7 (80-138)||(14649663-14649721)
chr7 (41-138)||(3268855-3268952)
chr7 (62-139)||(46054845-46054921)
chr7 (41-162)||(20461511-20461634)
chr7 (41-163)||(3487232-3487352)
chr7 (58-173)||(2630331-2630445)
chr7 (102-163)||(8308900-8308961)
chr7 (42-137)||(2353131-2353227)
chr7 (123-163)||(4828998-4829038)
chr7 (90-138)||(10253629-10253677)
chr7 (58-105)||(1255135-1255182)
chr7 (72-162)||(7372434-7372522)
chr7 (41-102)||(9755922-9755983)
chr7 (41-102)||(9800718-9800779)
chr7 (58-148)||(10292900-10292989)
chr7 (106-138)||(28951863-28951895)
[»] chr2 (30 HSPs)
chr2 (41-190)||(27417100-27417249)
chr2 (46-190)||(30998905-30999048)
chr2 (41-163)||(18236167-18236289)
chr2 (42-159)||(21505007-21505124)
chr2 (41-161)||(24188098-24188217)
chr2 (58-174)||(16593604-16593719)
chr2 (41-163)||(1732679-1732801)
chr2 (41-148)||(14921918-14922025)
chr2 (41-163)||(17415028-17415149)
chr2 (41-163)||(19541165-19541286)
chr2 (86-163)||(18818875-18818952)
chr2 (62-138)||(24047531-24047608)
chr2 (41-148)||(22511074-22511181)
chr2 (41-138)||(17152282-17152379)
chr2 (41-138)||(21848963-21849060)
chr2 (58-190)||(25474183-25474314)
chr2 (62-133)||(15454433-15454504)
chr2 (62-157)||(31262147-31262241)
chr2 (42-190)||(35707933-35708080)
chr2 (103-162)||(22525685-22525744)
chr2 (88-162)||(31274131-31274205)
chr2 (41-144)||(32619758-32619856)
chr2 (41-125)||(15829250-15829333)
chr2 (63-138)||(17862560-17862635)
chr2 (44-163)||(34063705-34063824)
chr2 (41-94)||(27917916-27917969)
chr2 (62-187)||(1733241-1733365)
chr2 (86-139)||(17884531-17884584)
chr2 (115-148)||(19949436-19949469)
chr2 (86-138)||(30705374-30705427)
[»] chr4 (32 HSPs)
chr4 (41-190)||(47024603-47024751)
chr4 (41-187)||(17026537-17026682)
chr4 (41-163)||(34864160-34864281)
chr4 (41-190)||(15192332-15192480)
chr4 (41-190)||(18898111-18898259)
chr4 (42-190)||(25315069-25315216)
chr4 (66-190)||(51884756-51884879)
chr4 (42-186)||(12111169-12111311)
chr4 (41-163)||(19601927-19602048)
chr4 (42-187)||(5676329-5676474)
chr4 (42-190)||(27302907-27303054)
chr4 (56-190)||(1695684-1695817)
chr4 (41-163)||(13064554-13064676)
chr4 (41-163)||(31859765-31859887)
chr4 (41-190)||(5906600-5906749)
chr4 (62-163)||(7024083-7024184)
chr4 (41-163)||(23353750-23353868)
chr4 (62-138)||(46647344-46647420)
chr4 (64-190)||(10320058-10320183)
chr4 (41-159)||(33519158-33519276)
chr4 (41-162)||(17187301-17187422)
chr4 (50-134)||(17339707-17339792)
chr4 (42-163)||(9782849-9782968)
chr4 (40-163)||(21077360-21077483)
chr4 (41-163)||(29437599-29437711)
chr4 (41-115)||(9288338-9288412)
chr4 (74-163)||(22119782-22119870)
chr4 (62-163)||(26159905-26160005)
chr4 (73-138)||(32021954-32022018)
chr4 (62-114)||(18444399-18444451)
chr4 (41-138)||(10576581-10576678)
chr4 (97-138)||(13275631-13275672)
[»] chr3 (29 HSPs)
chr3 (62-159)||(19219079-19219176)
chr3 (58-162)||(19263769-19263876)
chr3 (41-190)||(10341915-10342064)
chr3 (41-163)||(18474298-18474420)
chr3 (41-163)||(19542988-19543110)
chr3 (41-188)||(18065925-18066072)
chr3 (41-144)||(11474975-11475078)
chr3 (42-148)||(16970591-16970697)
chr3 (41-190)||(33914405-33914553)
chr3 (95-187)||(25883285-25883377)
chr3 (58-190)||(1475117-1475248)
chr3 (41-190)||(21018006-21018154)
chr3 (42-154)||(25919345-25919456)
chr3 (41-188)||(23908110-23908257)
chr3 (42-163)||(8402415-8402537)
chr3 (41-139)||(26418848-26418946)
chr3 (62-135)||(21829025-21829098)
chr3 (98-190)||(11521350-11521442)
chr3 (41-163)||(5632407-5632528)
chr3 (62-138)||(25188906-25188983)
chr3 (41-190)||(27415297-27415444)
chr3 (41-146)||(28422581-28422685)
chr3 (81-166)||(2729484-2729571)
chr3 (74-160)||(30493132-30493218)
chr3 (58-187)||(13911403-13911530)
chr3 (95-163)||(12573472-12573540)
chr3 (95-163)||(13549936-13550004)
chr3 (62-114)||(26387758-26387810)
chr3 (85-137)||(19285270-19285322)
[»] scaffold0171 (2 HSPs)
scaffold0171 (42-162)||(21527-21647)
scaffold0171 (40-174)||(6323-6456)
[»] chr6 (17 HSPs)
chr6 (51-187)||(30355455-30355591)
chr6 (41-162)||(26499712-26499833)
chr6 (41-190)||(17860286-17860434)
chr6 (58-163)||(15575070-15575174)
chr6 (41-144)||(33638388-33638491)
chr6 (41-163)||(24507307-24507428)
chr6 (86-144)||(33638259-33638317)
chr6 (41-138)||(16439586-16439683)
chr6 (62-138)||(14924307-14924383)
chr6 (58-172)||(15998657-15998769)
chr6 (41-114)||(12972298-12972371)
chr6 (41-162)||(16387120-16387241)
chr6 (62-138)||(9396496-9396572)
chr6 (74-138)||(26512668-26512732)
chr6 (74-138)||(26517784-26517848)
chr6 (86-147)||(24618056-24618117)
chr6 (73-138)||(32930334-32930399)
[»] chr8 (30 HSPs)
chr8 (41-187)||(16052117-16052263)
chr8 (52-187)||(28901190-28901324)
chr8 (58-190)||(11310094-11310224)
chr8 (41-190)||(28902218-28902366)
chr8 (41-162)||(32239416-32239537)
chr8 (41-163)||(22894396-22894516)
chr8 (41-162)||(24696710-24696832)
chr8 (42-163)||(28291965-28292086)
chr8 (41-163)||(30543889-30544012)
chr8 (41-147)||(28859119-28859225)
chr8 (41-144)||(13583403-13583506)
chr8 (95-190)||(16054476-16054571)
chr8 (42-163)||(12956610-12956732)
chr8 (41-159)||(29291898-29292016)
chr8 (44-187)||(14976952-14977092)
chr8 (74-163)||(30850964-30851053)
chr8 (74-174)||(13081788-13081887)
chr8 (42-190)||(24120353-24120501)
chr8 (41-161)||(6888059-6888179)
chr8 (41-163)||(11437547-11437670)
chr8 (41-156)||(14424684-14424799)
chr8 (41-163)||(5153886-5154008)
chr8 (86-186)||(5569981-5570081)
chr8 (41-163)||(27097666-27097786)
chr8 (86-163)||(31436646-31436719)
chr8 (62-138)||(28074662-28074738)
chr8 (41-138)||(28260178-28260276)
chr8 (101-190)||(29047178-29047267)
chr8 (41-138)||(35135310-35135407)
chr8 (41-135)||(12774737-12774829)
[»] scaffold0650 (1 HSPs)
scaffold0650 (41-190)||(5607-5755)
[»] scaffold0188 (1 HSPs)
scaffold0188 (41-173)||(26809-26941)
[»] scaffold0011 (1 HSPs)
scaffold0011 (41-163)||(228051-228172)
[»] scaffold0282 (1 HSPs)
scaffold0282 (58-190)||(22451-22582)
[»] scaffold0065 (1 HSPs)
scaffold0065 (41-163)||(12373-12494)
[»] scaffold0386 (3 HSPs)
scaffold0386 (42-190)||(8546-8694)
scaffold0386 (80-190)||(11636-11746)
scaffold0386 (42-84)||(13014-13056)
[»] scaffold0190 (1 HSPs)
scaffold0190 (41-161)||(11564-11684)
[»] scaffold0337 (1 HSPs)
scaffold0337 (41-163)||(1937-2058)
[»] scaffold0362 (1 HSPs)
scaffold0362 (93-186)||(7799-7892)
[»] scaffold1149 (1 HSPs)
scaffold1149 (104-163)||(1978-2037)
[»] scaffold0002 (1 HSPs)
scaffold0002 (58-148)||(447122-447211)
[»] scaffold0185 (1 HSPs)
scaffold0185 (97-163)||(2684-2750)
[»] scaffold0043 (1 HSPs)
scaffold0043 (65-163)||(58898-58999)


Alignment Details
Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 30072244 - 30072393
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  30072244 aaatcatattaatcgacaaatcaagacatcacatgaaggatcaaagatatgaagattgaagattaatggttcttaaaaggtttttaaagacaatacaaag 30072343  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30072344 tgaagaaatttcatttcaagttcgtatgcgtttccaaacggaagaacgat 30072393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 26330055 - 26329907
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||    
T  26330055 aaatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-tcaatggtccttagaaggttttttaagacaatacaaag 26329957  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| |||||||||||||| || |||||| || |||||||||||||    
T  26329956 tgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 26329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 11274316 - 11274167
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    |||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||      
T  11274316 aaatcatgtatatcgacaaatcaagacatcacatgaaggatcaaggatatgaagattgaagaccaatggttcttagaaggtctttgaagacaatacaaga 11274217  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||| ||||||||||||||||||| || |||||| ||  ||||||||||||    
T  11274216 tgatgaaatttcatttcaagttcctaggagttttcatgcggaagaacgat 11274167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 16622662 - 16622514
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| || |||||||||||||||||||||||| || ||||||||||||||||| || ||||||||| |||| ||||||||||||||||||     
T  16622662 aaatcatgtaaattgacaaatcaagacatcacatgaaggattaaggatatgaagattgaagaccagtggttcttagaagg-ttttgaagacaatacaaat 16622564  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| ||||||||||||||||| ||||||||| | |||||||||||    
T  16622563 tgaagaaaattcatttcaagttcgtaggagtttccagatggaagaacgat 16622514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 18452789 - 18452677
Alignment:
Q  50 taatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaat 149  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||||||||||||||     
T  18452789 taatcgacaaatcaagacatcacatgagggatcaaagatatgaaaattgaagatcaatggttcttataaggttttttaaaacaatacaaagtgaagaaaa 18452690  T
Q  150 ttcatttcaagtt 162  Q
    |||||||||||||    
T  18452689 ttcatttcaagtt 18452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 17027656 - 17027804
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||||||||||||||||||| || | ||||||||||||||||||||||| | |||| |||||| |||||| |||||||||||||||||    
T  17027656 aaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaagtt-aatgcttcttagaaggttcttgaagacaatacaaag 17027754  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| || ||||||| ||| || ||||||||| ||| |||||||||    
T  17027755 tgaagaaaattaatttcaatttcctaggagtttccatacgaaagaacgat 17027804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 25594678 - 25594533
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||||||| | ||| |||||||||| ||| ||| |||||    
T  25594678 aaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggtttttgtagataatgcaaag 25594579  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
    |||||||| |||| ||||||||| || ||||||||| ||||||||||    
T  25594578 tgaagaaaattca-ttcaagttcctaggagtttccagacggaagaac 25594533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 24841882 - 24842030
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| |||||||||||||| ||| ||||||||||| ||||||  |||||||| ||||||||||||| |||| |||||||||||| |||||     
T  24841882 aaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggatatgtggattgaag-tcaatggttcttagaaggattttgaagacaacacaaaa 24841980  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| ||||||||| |||| || ||||||||| |||  ||||||||    
T  24841981 tgaagaaaattcatttcatgttcctaggagtttccagacgacagaacgat 24842030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 22229934 - 22230081
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||| | ||||||||||||||| |||||||||||||||||| | |||||||||||| |||||||| |||||| ||||||| ||||| ||||    
T  22229934 aatcatgtaaatcaacaaatcaagacatcacgtgaaggatcaaagatatgga-attgaagatcaagggttcttagaaggttgttgaagataataccaagt 22230032  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||   ||| |||||||| || |||||| || |||||||||||||    
T  22230033 gaagaaaacacatctcaagttcctaggagttttcagacggaagaacgat 22230081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 7742856 - 7742735
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||   ||| ||| ||||||| ||||| ||| |||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  7742856 aaatcatgtaaatcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaagacaatacaaag 7742757  T
Q  141 tgaagaaatttcatttcaagtt 162  Q
    ||||||||  || |||||||||    
T  7742756 tgaagaaaaatcgtttcaagtt 7742735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 16634175 - 16634296
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||| | |||||| ||||||||||||||| ||||||| |||  |||||||| ||||||| |||||||||||| |||||||||||||| |||||||      
T  16634175 aaatcatataaatcgacaaatcaagacatcacgtgaaggaacaataatatgaagtttgaagaccaatggttcttagaaggtttttgaagaaaatacaaga 16634274  T
Q  141 tgaagaaatttcatttcaagtt 162  Q
    |||| ||| |||||||||||||    
T  16634275 tgaaaaaaattcatttcaagtt 16634296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 26070602 - 26070724
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| |  ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||||| |||      
T  26070602 aaatcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaagattgaagatctatggttcgtataaggtttttgaagacaatgcaagt 26070701  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |  ||||| |||| |||||||||    
T  26070702 tagagaaaattcagttcaagttc 26070724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 19763823 - 19763750
Alignment:
Q  90 tgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  19763823 tgaagattgaagatcaagggttcttagaaggtttttgaagataatacaaagtgaagaaaattcatttcaagttc 19763750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 176
Target Start/End: Original strand, 24517474 - 24517609
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||||||| ||||||| ||||||||||| ||||  ||||||| ||| |||||||| | | ||||||||| |||| |||| ||||    
T  24517474 aaatcatgtaaatcggtaaatcaatacatcacgtgaaggatcaaggatacaaagattgcagaccaatggttatcataaggttttttaagataatagaaag 24517573  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttcca 176  Q
     ||||||| |||||||||||||| || |||||||||    
T  24517574 cgaagaaaattcatttcaagttcctaggagtttcca 24517609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 18178244 - 18178352
Alignment:
Q  55 gaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcat 154  Q
    |||||| ||||||| | ||||||||||| | ||||||||||||||||| |||| ||||||  ||||| |||||||| |||||||| |||| ||| |||||    
T  18178244 gaaaaaacaagacaccgcatgaaggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaagataatacaaattgaataaaattcat 18178343  T
Q  155 ttcaagttc 163  Q
     ||||||||    
T  18178344 ctcaagttc 18178352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 23157757 - 23157668
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||| || ||||| |||||||||| ||||||||||||| ||||| ||| ||||||| | |||||||||||| ||||||| ||||||    
T  23157757 tgaaggataaaggatattaagattgaagttcaatggttcttataaggtatttaaagacaacagaaagtgaagaaagttcatttaaagttc 23157668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 17382030 - 17381905
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagac---aataca 137  Q
    ||||||||| |||||  |||||||||||| |  ||||||||||| ||||||||| ||||||| |||||||||||| |  ||||||  ||||   ||||||    
T  17382030 aaatcatgtaaatcgtcaaatcaagacataatgtgaaggatcaaggatatgaagtttgaagaccaatggttcttagattgtttttcgagacattaataca 17381931  T
Q  138 aagtgaagaaatttcatttcaagttc 163  Q
    |  |||||||| ||||||||||||||    
T  17381930 agatgaagaaagttcatttcaagttc 17381905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 20694768 - 20694863
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 136  Q
    ||||||||| |||||  ||| |||||||||| ||||||||| |  || || |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  20694768 aaatcatgtaaatcggcaaaacaagacatcatatgaaggataacggacattaagattgaagataaatggttcttagaaggtatttgaagacaatac 20694863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 25680719 - 25680857
Alignment:
Q  44 tcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtga 143  Q
    |||||| |||||| ||| ||||| ||||  ||||||||||| |||| ||| ||| |||  |||| ||||||| |||||||| ||| |||||||||||| |    
T  25680719 tcatgtaaatcgacaaaccaagaaatcatgtgaaggatcaaggataagaa-atttaaggccaatagttcttagaaggttttagaaaacaatacaaagtaa 25680817  T
Q  144 agaaatttcatttcaagttcgtatgagtttccaaacggaa 183  Q
    ||||| ||||||||| |||  || ||||||||| ||||||    
T  25680818 agaaaattcatttcaggtttctaggagtttccagacggaa 25680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 24410894 - 24410830
Alignment:
Q  63 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttga 127  Q
    |||||||||||||||||||| | ||| |||||||| ||||||||||||||||| ||||| |||||    
T  24410894 aagacatcacatgaaggatcgaggatctgaagattcaagatcaatggttcttataaggtatttga 24410830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 12339983 - 12339899
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtga 143  Q
    ||||||||||||||| ||||||||||| |||  ||||| ||||| ||||| |||||||| |||||  ||||||||||||||||||||    
T  12339983 aaatcaagacatcacgtgaaggatcaaggat--gaagaattgaaaatcaagggttcttagaaggtcgttgaagacaatacaaagtga 12339899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 22643840 - 22643773
Alignment:
Q  92 aagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaa 159  Q
    |||||| || |||| ||||||||||||||| |||||| |||||||||| |||||||| ||||||||||    
T  22643840 aagattaaatatcagtggttcttaaaaggtatttgaatacaatacaaactgaagaaaattcatttcaa 22643773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 24130765 - 24130854
Alignment:
Q  52 atcgaaaaatcaagacatcacatgaaggatcaaa--gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    |||| |||| |||||||||||||||||||| | |  |||||||||| | || |||||||| ||||| |||||||||||| ||||||||||    
T  24130765 atcggaaaaacaagacatcacatgaaggattataaggatatgaagaataaatatcaatggatcttagaaggtttttgaatacaatacaaa 24130854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 25367722 - 25367836
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||| ||||  ||| |||||||||||  ||| | |||| ||||||| ||| ||||||||||||| |||   |||||||| |||| ||||    
T  25367722 aaatcatgtaaatcggaaaagaaaggcatcacatgaaatatcgatgatacgaagattaaagttcaatggttcttagaagacatttgaaga-aatagaaag 25367820  T
Q  141 tgaagaaatttcattt 156  Q
    |||||||| |||||||    
T  25367821 tgaagaaaattcattt 25367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 17695402 - 17695352
Alignment:
Q  88 tatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||||| | ||||||||||||||| ||| ||||||||||||||||||||||    
T  17695402 tatgaataatgaagatcaatggttattagaaggtttttgaagacaatacaa 17695352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 11997859 - 11997782
Alignment:
Q  62 caagacatcacatgaaggatcaa-agatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||||||||  || ||||||||| ||||||||||| |||||||||||| || ||| ||||||||| |||| |||||||    
T  11997859 caagacatcttattaaggatcaagagatatgaagaatgaagatcaatgatttttagaaggtttttaaagataatacaa 11997782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 25075298 - 25075201
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    ||||||||| ||||   ||||||||||||||  ||||||||||| |||  ||||| ||||||||||| ||||||||||| ||| || ||||||| |||||    
T  25075298 aaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggat--gaagaattgaagatcaagggttcttaaaatgttgttaaagacaacacaaa 25075201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 25133267 - 25133170
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    ||||||||| ||||   ||||||||||||||  ||||||||||| |||  ||||| ||||||||||| ||||||||||| ||| || ||||||| |||||    
T  25133267 aaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggat--gaagaattgaagatcaagggttcttaaaatgttgttaaagacaacacaaa 25133170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 19331671 - 19331743
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaaga 146  Q
    ||||||||| | |||||||||||||||  |||||| || ||| |||   |||||||||||||||| |||||||    
T  19331671 tgaaggatcgaggatatgaagattgaaattcaatgatttttagaagacatttgaagacaatacaatgtgaaga 19331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 9e-63; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 11769980 - 11769831
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11769980 aaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaagacaatacaaag 11769881  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||    
T  11769880 tgaagaaaattcatttcaagttcctatgagtttccagacggaagaacgat 11769831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 25494474 - 25494357
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25494474 aaatcatgtaaatcgacaaatcaagacatcacattaaggagcaa-gatatgaagattgaagaccaatggttcttagaaggtttttgaagacaatacaaag 25494376  T
Q  141 tgaagaaatttcatttcaa 159  Q
    |||||||| ||||||||||    
T  25494375 tgaagaaaattcatttcaa 25494357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 25727895 - 25727785
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||| | |||||||||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  25727895 aaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaatccaaag 25727796  T
Q  141 tgaagaaattt 151  Q
    |||||||||||    
T  25727795 tgaagaaattt 25727785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 25736303 - 25736193
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||| | |||||||||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  25736303 aaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaatccaaag 25736204  T
Q  141 tgaagaaattt 151  Q
    |||||||||||    
T  25736203 tgaagaaattt 25736193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 23519754 - 23519606
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| | |||||||||| || |||||||||||  ||||||| |||||||| |||||||||||| |||||| |||||||||||| ||||    
T  23519754 aaatcatgtaaatcgacacatcaagacattacgtgaaggatcaagaatatgaa-attgaagaccaatggttcttagaaggttgttgaagacaatagaaag 23519656  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| || ||||||||||| || |||||| || |||||||||||||    
T  23519655 tgaagaaaatttatttcaagttcctaggagttttcagacggaagaacgat 23519606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 18300988 - 18300857
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| ||| || ||||||||||||||| ||||||||||| |||||||||||| || | |||||||||||| ||||||||||||||||||||| |||    
T  18300988 aatcatgtaaatagacaaatcaagacatcacgtgaaggatcaaggatatgaagattaaataccaatggttcttagaaggtttttgaagacaatacagagt 18300889  T
Q  142 gaagaaatttcatttcaagttcgtatgagttt 173  Q
    |||||||  | ||||||| ||| || ||||||    
T  18300888 gaagaaaaattatttcaaattcctaggagttt 18300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 50047325 - 50047452
Alignment:
Q  63 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagtt 162  Q
    |||| ||||| ||||||||||| | |||||| |||||||||||||||| ||||||||||| |||||||||||||||| |||||||| ||||||| |||||    
T  50047325 aagaaatcacgtgaaggatcaagggtatgaatattgaagatcaatggtacttaaaaggttattgaagacaatacaaaatgaagaaaattcattttaagtt 50047424  T
Q  163 cgtatgagtttccaaacggaagaacgat 190  Q
    | || |||||| | ||| ||||||||||    
T  50047425 cctaggagttttcgaacagaagaacgat 50047452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 26657604 - 26657749
Alignment:
Q  40 aaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    |||||||||| |||||| |||||||||||| |  ||||||||||| | |||||| || |||| ||||| ||||||| ||||||||||||||||| |||||    
T  26657604 aaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcgaag-tcaatagttcttataaggtttttgaagacaaaacaaa 26657702  T
Q  140 gtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaa 186  Q
    ||||||||| |||||||||||||| || |||||| || ||| |||||    
T  26657703 gtgaagaaaattcatttcaagttcctaggagttttcagacgaaagaa 26657749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 173
Target Start/End: Original strand, 30675613 - 30675744
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  || | |||||||||  |||||||||||  || ||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  30675613 aaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaa-atcaatggttcttagaaggtttttgaagataatacaaag 30675711  T
Q  141 tgaagaaatttcatttcaagttcgtatgagttt 173  Q
    |||||||| |||||||||||||| || ||||||    
T  30675712 tgaagaaaattcatttcaagttcctaggagttt 30675744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 25730557 - 25730450
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||| || ||||||||| ||||||||||||||||  ||||||||||| ||||||  ||||    
T  25730557 aaatcatgtaaatcgacaaatcaagatatcacatgaaggatcaaggagatgaagatttaagatcaatggttcttggaaggtttttgacgacaatcgaaag 25730458  T
Q  141 tgaagaaa 148  Q
    ||||||||    
T  25730457 tgaagaaa 25730450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 26854306 - 26854184
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| || ||  ||| |||||||| |  ||||||||||| |||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||    
T  26854306 aaatcatgtaaaccggcaaaacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaatacaaag 26854207  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||| ||||||    
T  26854206 tgaagaaaattcatttgaagttc 26854184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 12423847 - 12423752
Alignment:
Q  95 attgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||| || |||||||||||||| || |||||| |||||| |||||||||    
T  12423847 attgaagatcaaaggttcttagaaggttgttgaagacaatacaaagtgaaggaaattcatttcaagttcctaggagttttcaaacgaaagaacgat 12423752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 27461153 - 27461070
Alignment:
Q  55 gaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||||| |||||||||||||||| |||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27461153 gaaaaaacaagacatcacatgaaagatcgaggatatgaagtatgaagatcaatggttcttaaaaggtttttgaagacaatacaa 27461070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 30781906 - 30782010
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||  ||||||||||| |||  ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||    
T  30781906 aaatcaagacatcatgtgaaggatcaaggat--gaagaattgaagatcaagggttcttaaaaggttgttgaagacaatacaaagtgaagaaaattgattt 30782003  T
Q  157 caagttc 163  Q
    |||||||    
T  30782004 caagttc 30782010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 52271198 - 52271113
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaa 159  Q
    ||||||||| | |||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  52271198 tgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaa 52271113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 26102195 - 26102306
Alignment:
Q  51 aatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatt 150  Q
    |||||| ||| ||||||||||| |||| |||||| |||||||||| |||||||||||| || ||| ||||||||||||||||||||||  ||| |||| |    
T  26102195 aatcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaatacaagttgaggaaaat 26102294  T
Q  151 tcatttcaagtt 162  Q
    |||| |||||||    
T  26102295 tcatctcaagtt 26102306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 19257769 - 19257674
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaa 159  Q
    |||||||||||||||| |||| | ||||||||||||||| |||||  ||||||| ||||| |||||||||||||||||||||||||| || |||||||    
T  19257769 caagacatcacatgaaagatcgaggatatgaagattgaacatcaa--gttcttagaaggtctttgaagacaatacaaagtgaagaaaatttatttcaa 19257674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 23223541 - 23223675
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttt-tgaagacaatacaaa 139  Q
    ||||||||| |||| | || |||||||||| |||||||  |||| ||||||||||||||| | ||||  ||| || |||||||| |||||||||||||||    
T  23223541 aaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaaggatatgaagattgaaaaccaataattcatagaaggttttttgaagacaatacaaa 23223640  T
Q  140 gtgaagaaatttcatttcaagttcgtatgagtttc 174  Q
    ||||| ||| |||||||||||||| || |||||||    
T  23223641 gtgaaaaaaattcatttcaagttcctaggagtttc 23223675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 9328341 - 9328444
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaaga 185  Q
    |||||||||||||||  ||||| ||||||| |||||||||||||||||||| ||||||||||| |||| | ||||||| || ||||||||| | ||||||    
T  9328341 gatatgaagattgaat-tcaatcgttcttagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctaggagtttccatatggaaga 9328439  T
Q  186 acgat 190  Q
    |||||    
T  9328440 acgat 9328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 15298856 - 15298735
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| ||||| ||||  | ||||||| | |||||||||||| ||||||||||||||||||||| | ||||||| |||||||| |    
T  15298856 aaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaag-caatacaatg 15298758  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||| ||| ||||||||||||||    
T  15298757 tgaataaaattcatttcaagttc 15298735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 25373907 - 25373996
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    ||||||||| | |||||||||||| |||| |||||||||||| |||||| || ||||||||||||  |||||||| ||||||||||||||    
T  25373907 tgaaggatccaggatatgaagattaaagaccaatggttcttagaaggttgtttaagacaatacaagatgaagaaaattcatttcaagttc 25373996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 31313680 - 31313777
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||| ||| | |||| ||| ||||||| |||||||| ||  ||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  31313680 aaatcatgtaaattggaaaaacaatacatcacgtgaaggattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaatacaa 31313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 9353186 - 9353289
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaaga 185  Q
    |||||||||||||||  |||||  |||||| |||||||||||||| ||||| ||||||||||| |||| | ||||||| |||||||||||| | ||||||    
T  9353186 gatatgaagattgaat-tcaatcattcttagaaggtttttgaagaaaatactaagtgaagaaaattcagtccaagttcctatgagtttccatatggaaga 9353284  T
Q  186 acgat 190  Q
    |||||    
T  9353285 acgat 9353289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 15416960 - 15416866
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaag-atatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 134  Q
    ||||||||| | |||  ||| ||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  15416960 aaatcatgtaattcggcaaagcaagacaccacatgaaggatcaagggatatgaagaatgaagatcaatggttcttataaggtttttaaagacaat 15416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 34381838 - 34381920
Alignment:
Q  40 aaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtt 122  Q
    ||||| |||| |||||| ||||||| ||||||| |||| |||||| ||||||||| |||||||||||||||| ||| ||||||    
T  34381838 aaaataatgtaaatcgacaaatcaaaacatcacgtgaaagatcaaggatatgaagtttgaagatcaatggttgttataaggtt 34381920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 9252532 - 9252447
Alignment:
Q  105 aatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||| |||| | ||||||| ||||||||| || |  ||||||||||    
T  9252532 aatggttattagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctatgagttttcagattgaagaacgat 9252447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 31319599 - 31319504
Alignment:
Q  39 caaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaa-agatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 134  Q
    ||||||||||| | | | |||| ||||||| ||||| ||||||||| ||||||||| | ||||||||||||||||||| ||| ||||||||||||||    
T  31319599 caaaatcatgtaatttggaaaagcaagacaccacat-aaggatcaagagatatgaataatgaagatcaatggttcttagaagttttttgaagacaat 31319504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 23505938 - 23506006
Alignment:
Q  94 gattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    ||||||||||||||||| |||  |||   |||||||||||||||||||||||||| ||||||||||||||    
T  23505938 gattgaagatcaatggt-cttggaagacatttgaagacaatacaaagtgaagaaaattcatttcaagttc 23506006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 25126630 - 25126730
Alignment:
Q  63 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagtt 162  Q
    |||||||||| ||||||||  | ||||||| || |  |||||||| ||||||| ||  | |||||| |||||||||| |||||||| |||||||||||||    
T  25126630 aagacatcacgtgaaggattgaggatatgacgactacagatcaatagttcttagaaaatctttgaatacaatacaaaatgaagaaaattcatttcaagtt 25126729  T
Q  163 c 163  Q
    |    
T  25126730 c 25126730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 18391232 - 18391314
Alignment:
Q  63 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaagg-tttttgaagacaatacaaagtgaa 144  Q
    |||||||||||||||| || || ||| | || |  ||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  18391232 aagacatcacatgaagaatgaaggatttaaaaaacgaagatcaatggttcttaaaaggtttttttaagacaatacaaaatgaa 18391314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 18795330 - 18795407
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttct-taaaaggtttttgaagacaatacaa 138  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||| |||| | || | ||||| ||||||||||||    
T  18795330 caagacatcacatgatggatcaaagatatgaaaagtgaagatgaatgattctatgaaggtttttttaagacaatacaa 18795407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 23521715 - 23521635
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtt 122  Q
    ||||||||| |||||| | ||||||||||||| |||||||| |   ||||||| |||||||| |||||||||||| ||||||    
T  23521715 aaatcatgtaaatcgacacatcaagacatcacgtgaaggataaggaatatgaa-attgaagaccaatggttcttagaaggtt 23521635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 25665701 - 25665634
Alignment:
Q  96 ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||| ||||||||||||| ||  | ||| ||||||||||||||||||||||  |||||| ||||||    
T  25665701 ttgaagttcaatggttcttataaaatatttaaagacaatacaaagtgaagaaaaatcatttgaagttc 25665634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 21548776 - 21548898
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    |||||| || ||||| |||| ||||||||||| | ||| ||    |||||||||||||||| | ||||||||||| |||   |||||||| |||||||      
T  21548776 aaatcaagtaaatcggaaaaacaagacatcacgtaaagaattgtggatatgaagattgaagctaaatggttcttagaagacatttgaagataatacaagt 21548875  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||| ||| ||||||| ||||||    
T  21548876 tgaaaaaaattcatttgaagttc 21548898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 5e-55; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 29544649 - 29544797
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  29544649 aatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagt 29544748  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||| |||||||||||||| || |||||| || |||||||||||||    
T  29544749 gaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 29544797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 20470792 - 20470647
Alignment:
Q  45 catgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaa 144  Q
    ||||| |||||| ||||||||||||| |||||| |||||| ||| |||| ||||||| ||||||||||||| |||||| |||||||||||||||| ||||    
T  20470792 catgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttcttgaagacaatacaaaatgaa 20470693  T
Q  145 gaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||| || |||||||||||||||||||||||| || ||||||||||    
T  20470692 gaaaattgatttcaagttcgtatgagtttccagacagaagaacgat 20470647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 7494825 - 7494973
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||   ||||||||||||||||    
T  7494825 aaatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-ttaatggttcttagaaggtccatgaagacaatacaaag 7494923  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| || |||||||| |  || ||||||||| |||||||||||||    
T  7494924 tgaagaaaatttatttcaagattctaggagtttccagacggaagaacgat 7494973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 9801860 - 9801712
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||| ||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  9801860 aaatcatgtaaatcgacaaatcaaaacatcatgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaagaaaatacaaag 9801762  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||| |||| || ||||||||||| || |||||| |||| |||||||||||    
T  9801761 tgaggaaaatttatttcaagttcctaggagttttcaaatggaagaacgat 9801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 21545789 - 21545668
Alignment:
Q  65 gacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcg 164  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||| |||||||||||||      
T  21545789 gacatcacgtgaaggatcaaggatatgaagattgaagatcaatggttcttagaaagtatttgaagacaataaaaagtgaagaaaattcatttcaagtttc 21545690  T
Q  165 tatgagtttccaaacggaagaa 186  Q
    || ||||||||| ||| |||||    
T  21545689 taggagtttccagacgaaagaa 21545668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 20017081 - 20017227
Alignment:
Q  41 aaatcatgttaatcgaaaaatc-aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    ||||||||||  |||| ||||| |||||||||  |||||||| ||  ||||||||||||||  ||||||||||||| |||||| ||||||||||||||||    
T  20017081 aaatcatgtttctcgacaaatccaagacatcatgtgaaggattaagcatatgaagattgaac-tcaatggttcttagaaggttcttgaagacaatacaaa 20017179  T
Q  140 gtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
    ||||||||| |||||||||||||| || |||||| |||||| ||||||    
T  20017180 gtgaagaaaattcatttcaagttcctaggagtttacaaacgaaagaac 20017227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 23125029 - 23125147
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||||  |||||||||||||  ||||||||| | |||||||||||||||| ||||||||||||| ||| || || ||||||||||||||    
T  23125029 aaatcatgtaaatcgaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataagattcttaaagacaatacaaag 23125128  T
Q  141 tgaagaaatttcatttcaa 159  Q
    |||||||| ||||||||||    
T  23125129 tgaagaaaattcatttcaa 23125147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 7142227 - 7142348
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||  || |||||| |||| ||||||||||||| ||||||||     
T  7142227 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatgaagattgaa-ttcgatggtttttaataggtttttgaagagaatacaaat 7142325  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    | |||||| | |||| |||||||    
T  7142326 taaagaaaatccattgcaagttc 7142348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 9761401 - 9761313
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaaga 130  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  9761401 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaaga 9761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 315319 - 315450
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||  |||||||||||||||  ||||| ||||||| |||  ||||||  |||||| ||||||||||||||||||||| ||| |||||||    
T  315319 aaatcaagacatcatgtgaaggatcaaagat--gaagagttgaagaacaacagttctttgaaggttgttgaagacaatacaaagtgaataaaattcattt 315416  T
Q  157 caagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||| || ||||||||| ||| |||||||||    
T  315417 caagttcctaggagtttccagacgaaagaacgat 315450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 1074581 - 1074703
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| | |||| ||||||||||  | ||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||      
T  1074581 aaatcatgtaaattggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaaggttgttgaagacaatacaaga 1074680  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    ||||||||  | |||||||||||    
T  1074681 tgaagaaaagtaatttcaagttc 1074703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 7815453 - 7815600
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||| | |||| |||||||||  ||||||||||| |||||  | ||||||||||||  |||   | |||||| ||||||||||||||||||    
T  7815453 aatcatgtaaatcaacaaataaagacatcatgtgaaggatcaaggatataga-attgaagatcaaaagttgacagaaggttgttgaagacaatacaaagt 7815551  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||| |||||||||||||| || |||||| || |||||||||||||    
T  7815552 gaagaaaattcatttcaagttcataggagttttcagacggaagaacgat 7815600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 20446348 - 20446475
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||  |||||||||||||||  ||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||| |||  ||||||    
T  20446348 aaatcaagacatcaagtgaaggatcaaagat--gaagaattgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaaaaaaaatcattt 20446445  T
Q  157 caagttcgtatgagtttccaaacggaagaa 186  Q
     |||||| || |||| | |||| |||||||    
T  20446446 taagttcataagagtattcaaatggaagaa 20446475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 21471926 - 21472072
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    |||||||| |||| | |||||| |||||||| ||| ||||||| |||  ||||| |||||||| || |||||||| |||||| ||||||| |||||||||    
T  21471926 aatcatgtaaatcaataaatcatgacatcacgtgagggatcaaggat--gaagaattgaagataaagggttcttagaaggttattgaagaaaatacaaag 21472023  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||| |||| |||||||||||||| || |||||| || |||||||||||||    
T  21472024 tgacgaaa-ttcatttcaagttcctaggagttttcatacggaagaacgat 21472072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 10670515 - 10670417
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaaga 185  Q
    ||||||||||| |||| ||||||||||||| ||||||||  |||||||||||||||||| |||  |||||||||||||||| |||||| || ||||||||    
T  10670515 gatatgaagatcgaag-tcaatggttcttagaaggttttctaagacaatacaaagtgaataaaaatcatttcaagttcgtaggagttttcagacggaaga 10670417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 18496726 - 18496815
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    ||||||||||| |||||||||||||||||  ||||||||||| || ||| ||||||| |||||||  |||||||| ||||||||||||||    
T  18496726 tgaaggatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaagaaaatacaagatgaagaaaattcatttcaagttc 18496815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 12358711 - 12358655
Alignment:
Q  79 gatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 135  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12358711 gatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaata 12358655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 9070517 - 9070646
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| ||  ||| |||||||| | ||||||||||| |||||||| || ||| |||||  ||||||| ||||||||| ||||||||| ||||    
T  9070517 aaatcatgtaaattgacgaataaagacatcgcgtgaaggatcaaggatatgaatatcgaa-atcaagtgttcttagaaggttttttaagacaatataaag 9070615  T
Q  141 tgaagaaatttcatttcaagttcgtatgagt 171  Q
    |||||||  |||| |||||||||||| ||||    
T  9070616 tgaagaatattcagttcaagttcgtaggagt 9070646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 22067771 - 22067657
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaa-gattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||  ||||||||||| |  |||||  |||||| ||||| |||||||| |||||| ||||||||||||||||||||| | | |||||||    
T  22067771 aaatcaagacatcatgtgaaggatcaagg--atgaacaattgaaaatcaagggttcttagaaggttgttgaagacaatacaaagtgaaaagaattcattt 22067674  T
Q  157 caagttcgtatgagttt 173  Q
    ||||||| || ||||||    
T  22067673 caagttcctaggagttt 22067657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 4977806 - 4977687
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||  | ||||||||||||||||||||||||| | ||||||||||||||||  | |||||| ||| |||  ||||||||| ||||||||     
T  4977806 aaatcatgtaaatatacaaatcaagacatcacatgaaggatcgaggatatgaagattgaag-gctatggtttttagaagacttttgaagaaaatacaaaa 4977708  T
Q  141 tgaagaaatttcatttcaagt 161  Q
    |||| ||| ||||||| ||||    
T  4977707 tgaacaaaattcatttgaagt 4977687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 7493495 - 7493590
Alignment:
Q  95 attgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||| |||| ||| |||||| ||| ||  || |||||| |||| |||||||||||    
T  7493495 attgaagatcaagggttcttaaaaggttattgaagataatacaaaatgaaaaaaattcattccaaatttctaggagttttcaaagggaagaacgat 7493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 7778024 - 7777895
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||| | ||| ||||||||||| ||||||||||| |||||||| |||||| |  |||| ||||||||||||| |||| ||||||| |||||    
T  7778024 aatcatgtaaatcaacaaagcaagacatcacgtgaaggatcaacgatatgaa-attgaaaactaatg-ttcttaaaaggttgttgaggacaatataaagt 7777927  T
Q  142 gaagaaatttcatttcaagttcgtatgagttt 173  Q
    |||||||  ||||  ||||||| || ||||||    
T  7777926 gaagaaaaatcataccaagttcctaagagttt 7777895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 30405722 - 30405825
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  |||  |||| ||||  ||||||||| | |||||||||||||||| |||||| |||||| ||||| |||||| |||||||||||    
T  30405722 aaatcatgtaaatcggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaatacaatacaaag 30405821  T
Q  141 tgaa 144  Q
    ||||    
T  30405822 tgaa 30405825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 5312739 - 5312665
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaa 148  Q
    ||||||||||| ||||||| ||||||| || ||||||||||| ||| ||||||||||||||||||  ||||||||    
T  5312739 tgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaatacaagatgaagaaa 5312665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 24596990 - 24596868
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||| ||| |||||  ||| ||||||||||| || | |||| | ||||| |||||||||| ||| |||||| || |||   ||||||||||||||||||    
T  24596990 aaatcgtgtaaatcggcaaaacaagacatcacgtggaagatcgaggatataaagattgaagttcagtggttcatagaagaaatttgaagacaatacaaag 24596891  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||| ||||||    
T  24596890 tgaagaaaattcatttgaagttc 24596868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 22532630 - 22532538
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 134  Q
    ||||||||| |||||  ||| ||||||||||||||| ||||| | |||| ||||| |||| |||||||||||||| || |||||||||||||||    
T  22532630 aaatcatgtaaatcggcaaa-caagacatcacatgatggatcgaggatacgaagaatgaatatcaatggttcttagaaagtttttgaagacaat 22532538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 14649663 - 14649721
Alignment:
Q  80 atcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||| |||||||| | ||||||||||||||| ||| ||||||||||||||||||||||    
T  14649663 atcaaggatatgaataatgaagatcaatggttattagaaggtttttgaagacaatacaa 14649721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 3268952 - 3268855
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||| |||||  ||| ||||| |||||||||||||||||  ||||||||| |||| || |||| |||||||||| |||||  | |||||||||    
T  3268952 aaatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaagaatgaaaattaatgattcttaaaagctttttataaacaatacaa 3268855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 46054845 - 46054921
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    |||||| |||||| |||||| ||||||||||||||||||||| ||| | ||||| || ||| ||||||||||||||||    
T  46054845 caagacgtcacataaaggattaaagatatgaagattgaagattaat-gatcttacaaagttgttgaagacaatacaaa 46054921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 20461634 - 20461511
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttga--agacaatacaa 138  Q
    ||||||||| |||||  |||  |||||||||  ||||||||||| ||||||||||||||||| ||  | |||||  ||||| ||| |  |||||||||||    
T  20461634 aaatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaagattgaagaccaccgattcttgcaaggtattttaagagacaatacaa 20461535  T
Q  139 agtgaagaaatttcatttcaagtt 162  Q
    ||||||| || ||| |||||||||    
T  20461534 agtgaagtaaattcctttcaagtt 20461511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 3487352 - 3487232
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| |||||||||| |||||||||||| ||||| ||||| ||| ||||| |  ||| | |||   ||| ||||||||||||||    
T  3487352 aaatcatgtgaatcggcaaaacaagacatcaaatgaaggatcaatgatataaagatcgaacatcaacgactctcagaagacattttaagacaatacaaag 3487253  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||  ||||||| ||||||    
T  3487252 tgaagaa--ttcatttgaagttc 3487232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 2630445 - 2630331
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||  ||||| ||||| |||  ||||| ||||||||||| |||||||||  |||| || ||||||||| ||| |||||| | || ||||    
T  2630445 aaatcaagacatcatgtgaagaatcaaggat--gaagaattgaagatcaagggttcttaattggttgttaaagacaataaaaattgaagacaattaattt 2630348  T
Q  157 caagttcgtatgagttt 173  Q
    ||||||| || ||||||    
T  2630347 caagttcctaggagttt 2630331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 8308961 - 8308900
Alignment:
Q  102 atcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||||||||| ||||| ||||||||||||||||| | |||||  ||||| ||||||||    
T  8308961 atcaatggttcttagaaggtctttgaagacaatacaaaataaagaagattcatatcaagttc 8308900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 2353227 - 2353131
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaag-atatgaagattgaagatcaatggttcttaaaaggtttttgaagacaataca 137  Q
    |||||||| |||||| ||| ||||||||| ||||| ||||||| | || |||| | ||||||||||||||| ||| ||||| |||  ||||||||||    
T  2353227 aatcatgtaaatcgacaaagcaagacatctcatgatggatcaatggatgtgaaaaatgaagatcaatggttattagaaggtgtttatagacaataca 2353131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 4828998 - 4829038
Alignment:
Q  123 tttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  4828998 tttgaagacaatacaaagtgaagataattcatttcaagttc 4829038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 10253677 - 10253629
Alignment:
Q  90 tgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||||||    
T  10253677 tgaagattgaagatcaatgatacttatagggtttttgaagacaatacaa 10253629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 1255182 - 1255135
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatca 105  Q
    ||||||| ||||||||||||||||||| |||| ||||| |||||||||    
T  1255182 aaatcaaaacatcacatgaaggatcaaggatacgaagaatgaagatca 1255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 7372522 - 7372434
Alignment:
Q  72 catgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagtt 162  Q
    ||||||||||||| ||||| ||| | |||| |||||| | |||| ||| ||||| |||||||||||| ||||||||| || ||||||||||    
T  7372522 catgaaggatcaaggatataaagctggaagttcaatgat-cttagaagatttttaaagacaatacaa-gtgaagaaaatttatttcaagtt 7372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 9755922 - 9755983
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaaga 102  Q
    ||||||||  |||||| ||||| ||||||||  ||||||||||| |||||||||||| ||||    
T  9755922 aaatcatgcaaatcgacaaatctagacatcatgtgaaggatcaacgatatgaagattaaaga 9755983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 9800718 - 9800779
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaaga 102  Q
    ||||||||  |||||| ||||| ||||||||  ||||||||||| |||||||||||| ||||    
T  9800718 aaatcatgcaaatcgagaaatctagacatcatgtgaaggatcaatgatatgaagattaaaga 9800779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 10292900 - 10292989
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaa 148  Q
    ||||||||||||||  |||||||| || |  |||||| | |||||||||| |||||||| ||||| |||||| |||||| |||| |||||||    
T  10292900 aaatcaagacatcatgtgaaggataaagg--atgaagaactgaagatcaagggttcttagaaggtgtttgaatacaataaaaagggaagaaa 10292989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 28951895 - 28951863
Alignment:
Q  106 atggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||| |||||||||||||||||||||||||||    
T  28951895 atggtacttaaaaggtttttgaagacaatacaa 28951863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 27417249 - 27417100
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| | |||||||||||| |||||||||||    
T  27417249 aaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatgatatgaatgttgaagaccaatggttctaagaaggtttttgaaaacaatacaaag 27417150  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| ||||||||||||||  | ||||||||| |||||||||||||    
T  27417149 tgaagaaaattcatttcaagttccaaggagtttccagacggaagaacgat 27417100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 30998905 - 30999048
Alignment:
Q  46 atgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaag 145  Q
    |||| |||||| ||||||||| ||||  ||||||||||| |||||| | |||||||||||| |||||||| |||||| ||||||||||||||||||| ||    
T  30998905 atgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgta-attgaagatcaagggttcttagaaggttgttgaagacaatacaaagtggag 30999003  T
Q  146 aaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||| |||||||||||||| ||||||||| ||||||||||||||||    
T  30999004 aaaattcatttcaagttcatatgagttttcaaacggaagaacgat 30999048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 18236289 - 18236167
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| | |||  ||| |||||||||||||||||||||| | |||||||||||||||  |||||||||||| |||||| |||||||||||||||      
T  18236289 aaatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaagacaatacaaga 18236190  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  18236189 tgaagaaaattcatttcaagttc 18236167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 21505124 - 21505007
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| |||| ||||||||||||||| |||||| ||| ||||| ||||||| |||||||||| | ||||||||||||||||||||||  |    
T  21505124 aatcatgtaaatcgataaattaagacatcacatgaaagatcaaggatgtgaagtttgaagaccaatggttctgagaaggtttttgaagacaatacaagtt 21505025  T
Q  142 gaagaaatttcatttcaa 159  Q
    ||||||| ||||||||||    
T  21505024 gaagaaaattcatttcaa 21505007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 24188098 - 24188217
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||||  ||||||| ||||||||||||||||||  |||||||||||||||| |||| | ||||| || |||||||||||||||||||||    
T  24188098 aaatcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga-caatagatcttagaaagtttttgaagacaatacaaag 24188196  T
Q  141 tgaagaaatttcatttcaagt 161  Q
    |||||||  |||||| |||||    
T  24188197 tgaagaagattcattccaagt 24188217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 16593719 - 16593604
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagat-tgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||  ||||||||||| |||  |||||  |||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  16593719 aaatcaagacatcatttgaaggatcaacgat--gaagaaatgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaagaaaattcattt 16593622  T
Q  157 caagttcgtatgagtttc 174  Q
    ||||||| || |||||||    
T  16593621 caagttcctaggagtttc 16593604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 1732679 - 1732801
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| || ||| |||||||||||||||||||| ||  |||||||||||||||||||||| |||||| ||  | ||||||| |||||||||     
T  1732679 aaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttagaatatatttgaaggcaatacaaaa 1732778  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||| ||| || |||||||||||    
T  1732779 tgaataaaatttatttcaagttc 1732801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 14922025 - 14921918
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||| |||| ||| ||||||  ||||| ||| | |||||||||||||||| ||||||||||||| ||||| | || |||||||||||||    
T  14922025 aaatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggtatatgtagacaatacaaag 14921926  T
Q  141 tgaagaaa 148  Q
    ||||||||    
T  14921925 tgaagaaa 14921918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 17415149 - 17415028
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||| ||| |||||  ||| ||||||||||| ||||||||| | || |||||||||||| ||||||||||||||  || | ||||||||||| | ||||    
T  17415149 aaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggacatgaagattgaa-atcaatggttcttaggagttatttgaagacaacaaaaag 17415051  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  17415050 tgaagaaaattcatttcaagttc 17415028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 19541165 - 19541286
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  |||  |||||||||  ||||||||| | ||||||||||||||||| |||||||||||| |||| | || ||||||||||||||    
T  19541165 aaatcatgtaaatcggcaaaataagacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttcttataagg-tattaaagacaatacaaag 19541263  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    | |||||  ||||||||||||||    
T  19541264 ttaagaatcttcatttcaagttc 19541286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 18818875 - 18818952
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||    
T  18818875 gatatgaaaactgaagattaatggttcttagaaggtctttgaagacaatacaaagtgaagaaaattcaattcaagttc 18818952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 24047531 - 24047608
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttct-taaaaggtttttgaagacaatacaa 138  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||||||||  ||||||||| ||||||||||||||    
T  24047531 caagacatcccatgaaggatcaaggatatgaagaatgaagatcaatggttctcaaaaaggtttgtgaagacaatacaa 24047608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 22511074 - 22511181
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||||||||||||||||||  |||| |||  | |||||||||||||| | |||||| ||| || | |||||||||||||||||| ||     
T  22511074 aaatcatgtaaatcgaaaaatcaagacatcaagtgaaagattgaggatatgaagattgatgttcaatgattcatagatggtttttgaagacaatacgaaa 22511173  T
Q  141 tgaagaaa 148  Q
    ||||||||    
T  22511174 tgaagaaa 22511181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 17152282 - 17152379
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||| |||||  ||| |||||||||   ||||||||||| |||||||||| |||| || ||||||||||| |||||||||||||| |||||||    
T  17152282 aaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaatgaatatgaatggttcttagaaggtttttgaagataatacaa 17152379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 21849060 - 21848963
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||| |||| ||||| || | ||||||||||||||||||||||| ||||  || | |||| ||||||||||||||||||||||| ||| |||||||||    
T  21849060 aaataatgtaaatcggaagaacaagacatcacatgaaggatcaaggataataataatgaaaatcaatggttcttaaaaggttttggaacacaatacaa 21848963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 25474183 - 25474314
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttc 157  Q
    ||||||||||||||  ||||| ||||| ||| |  | ||||||| |||| |||||||| |||||| |||||||||||| |||||||||||| ||||||||    
T  25474183 aaatcaagacatcatgtgaagaatcaaggatgtaga-attgaaggtcaagggttcttagaaggttgttgaagacaatataaagtgaagaaaattcatttc 25474281  T
Q  158 aagttcgtatgagtttccaaacggaagaacgat 190  Q
    | |||| ||  |||||||| | | |||||||||    
T  25474282 aggttcctagtagtttccagatgaaagaacgat 25474314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 15454504 - 15454433
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 133  Q
    ||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||| ||| | |||||||    
T  15454504 caagacatcacatgaaggatcaaggatatgaagaataaagataaatggttcttaaaagttttctaaagacaa 15454433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 31262147 - 31262241
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttc 157  Q
    ||||||| ||||||||| ||| | |||||||||||||||||| |||||||||||  |||| ||||||||||||| ||  |||||||| ||||||||    
T  31262147 caagacaccacatgaag-atcgaggatatgaagattgaagattaatggttcttagtaggtctttgaagacaatataagttgaagaaaattcatttc 31262241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 35707933 - 35708080
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    |||||||| ||||  |||||||||||||||  ||||| ||||| |||  ||||| ||||| ||||| | |||||| |||||| ||||||||||||||||     
T  35707933 aatcatgtaaatcataaaatcaagacatcatgtgaagtatcaaggat--gaagaattgaatatcaaggtttcttagaaggttgttgaagacaatacaaaa 35708030  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||| ||| || |||||||||||  | |||||| || ||| |||||||||    
T  35708031 tgaacaaaatttatttcaagttctcaggagttttcagacgaaagaacgat 35708080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 22525744 - 22525685
Alignment:
Q  103 tcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagtt 162  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||    
T  22525744 tcaatggttcttagaaggtatttgaagacaacacaaagtgaagaaaatttatttcaagtt 22525685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 31274131 - 31274205
Alignment:
Q  88 tatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagtt 162  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||| ||  |||||||| |||||| ||||||    
T  31274131 tatgaaaattgaagattaatggttcttagaaggtctttgaagacaatataagttgaagaaaattcattccaagtt 31274205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 32619758 - 32619856
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| | |||| ||||||||||||||| |||    |||| |||||||||| |||| |||||  ||||| | ||||||||||||||||||||||||    
T  32619758 aaatcatgtaattcgacaaatcaagacatcacgtga----tcaaggatatgaagaatgaa-atcaaaagttctaagaaggtttttgaagacaatacaaag 32619852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 15829250 - 15829333
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggttttt 125  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||  |||||||| |||||||| ||| ||||| || ||| |||||    
T  15829250 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcattgatatgaa-attgaagaccaacggttcctataagtttttt 15829333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 17862560 - 17862635
Alignment:
Q  63 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||||||||| |||||| |||||||||| |||| |||  ||||||||| ||  |||||||||||| |||||    
T  17862560 aagacatcacatgaaagatcaaggatatgaagaatgaaaatcggtggttcttagaatttttttgaagacagtacaa 17862635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 34063824 - 34063705
Alignment:
Q  44 tcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtga 143  Q
    |||||| |||||  ||| |||||||||   ||||||||| | |||||||||||| ||  |  |||||| ||| |||   |||||||||||||||||||||    
T  34063824 tcatgtaaatcggcaaaacaagacatcgtgtgaaggatcgacgatatgaagatttaattttgatggttattagaagacatttgaagacaatacaaagtga 34063725  T
Q  144 agaaatttcatttcaagttc 163  Q
    ||||| ||||||| ||||||    
T  34063724 agaaaattcatttgaagttc 34063705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 27917969 - 27917916
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag 94  Q
    ||||||||| |||||| |||||||||||||| |||||||||||| || ||||||    
T  27917969 aaatcatgtcaatcgacaaatcaagacatcagatgaaggatcaaggagatgaag 27917916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 1733241 - 1733365
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagat-tgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaag 160  Q
    ||||||||||| |||||||| || |||  |||||  ||||||||||  ||||||| || ||| ||||||| ||||||||||||| ||| ||||||| |      
T  1733241 caagacatcacgtgaaggattaaggat--gaagaaatgaagatcaagagttcttagaatgttgttgaagataatacaaagtgaataaaattcattttaga 1733338  T
Q  161 ttcgtatgagtttccaaacggaagaac 187  Q
    ||| || |||||| || ||||||||||    
T  1733339 ttcctaggagttttcagacggaagaac 1733365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 17884584 - 17884531
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    |||||||||| ||||||||| || |||||| |||||||||||| || |||||||    
T  17884584 gatatgaagaatgaagatcattgattcttagaaggtttttgaaaactatacaaa 17884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 19949469 - 19949436
Alignment:
Q  115 aaaaggtttttgaagacaatacaaagtgaagaaa 148  Q
    |||||||| |||||||||||||||||||||||||    
T  19949469 aaaaggttattgaagacaatacaaagtgaagaaa 19949436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 30705374 - 30705427
Alignment:
Q  86 gatatgaagattgaagatcaatggttctt-aaaaggtttttgaagacaatacaa 138  Q
    |||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||    
T  30705374 gatatgaagaatgaagatcgatggttcttgaaaagtttttttaagacaatacaa 30705427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 47024751 - 47024603
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||    
T  47024751 aaatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaag-tcaatggttcttagaaggtttttgaaaacagtacaaag 47024653  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||| | || ||||||||||| || |||||| || | |||||||||||    
T  47024652 tgaagagaatttatttcaagttcctaggagttttcagatggaagaacgat 47024603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 17026682 - 17026537
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||  ||||||  ||| ||| | |||||||||||||| |||||||||||||||||||||    
T  17026682 aaatcatgtaaatcgacaaattaagacatcacatgaaggatcaagtatatgagaatttaagtt-aatggttcttaaaaagtttttgaagacaatacaaag 17026584  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
    |||||||| || ||||||||||| || ||||||||| ||||||||||    
T  17026583 tgaagaaaattaatttcaagttcctaggagtttccagacggaagaac 17026537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 34864281 - 34864160
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||||||||     
T  34864281 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatggagattgaag-tcaatggttcttagaaggtttttgtagacaatacaaaa 34864183  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||| ||||||    
T  34864182 tgaagaaaattcatttaaagttc 34864160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 15192332 - 15192480
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||||||| |||||| ||||||||||| |||||    
T  15192332 aaatcatgtaaatcgacaaaccaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcttagaaggttgttgaagacaattcaaag 15192430  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||| | |||||||||||||| || ||||||  | |||||||||||||    
T  15192431 tgaagacaattcatttcaagttcctaggagtttttagacggaagaacgat 15192480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 18898111 - 18898259
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||||||||||||||||||| | | |||| ||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  18898111 aaatcatgtaaatcgacaaatcaagacatcacatgaaggatccagggtatgcagattgaag-tcagtggttcttaaaaggtttttgaatacaatacaaag 18898209  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    | |||||| |||||||||||||| || || ||| || ||| |||||||||    
T  18898210 taaagaaaattcatttcaagttcctaggatttttcagacgtaagaacgat 18898259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 25315216 - 25315069
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| ||||||||||||| ||||||||||||| |||||||| ||| ||||| |||||||||||||| ||| |||||||||||||||  |    
T  25315216 aatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggatatgaa-attaaagataaatggttcttaaaatgttgttgaagacaatacaagat 25315118  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
     ||| || |||||||||||||| || ||||||||| |||||||||||||    
T  25315117 aaagtaaattcatttcaagttcctaagagtttccatacggaagaacgat 25315069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 51884756 - 51884879
Alignment:
Q  66 acatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgt 165  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||| ||| || ||||| ||||||||||||||||||| || ||||||||||| |    
T  51884756 acatcacatgaaggatcaaagatatgaa-attgaagatcaagggctcttagaagattgttgaatacaatacaaagtgaagaaaattaatttcaagttcct 51884854  T
Q  166 atgagtttccaaacggaagaacgat 190  Q
    |||||||| || |||||||||||||    
T  51884855 atgagttttcagacggaagaacgat 51884879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 12111311 - 12111169
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||| ||| |||||| |||||||| |||||| ||||||||||| |||||||| ||||||| ||||||||||||| ||||||||| |||| ||||||||||    
T  12111311 aatcttgtaaatcgacaaatcaagtcatcacgtgaaggatcaa-gatatgaatattgaag-tcaatggttcttataaggttttttaagataatacaaagt 12111214  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaa 186  Q
    ||||||| |||||||||||||  || |||||| ||||| ||||||    
T  12111213 gaagaaaattcatttcaagtttctaggagttttcaaacagaagaa 12111169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 19601927 - 19602048
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||| | ||||||||||||||| |||| |||| | ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  19601927 aaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcgaggatatgatgattgaaga-caatggttcttaaaaggtttttgaagacaataaaaag 19602025  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    || ||||| ||||||||| ||||    
T  19602026 tggagaaaattcatttcatgttc 19602048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 5676329 - 5676474
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| ||| || ||||||||||||||||||||||||||| ||||| ||| ||||| |  |||| |||||| ||||||||||||||||||||||  |    
T  5676329 aatcatgtaaattgataaatcaagacatcacatgaaggatcaaggatattaagtttgaatacaaatgattcttagaaggtttttgaagacaatacaagat 5676428  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
    ||||||| |||||||| ||||  || ||||||| | ||||||||||    
T  5676429 gaagaaaattcatttcgagttactaggagtttctagacggaagaac 5676474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 27302907 - 27303054
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| |||| |||||||||| || | |||||| |||||||| |||||| || || |||||||| |||||||||||||||| || |||||    
T  27302907 aatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaa-attgaacattaagggttcttagaaggtttttgaagacattataaagt 27303005  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||| ||||||| |||||| || |||||| || |||||||||||||    
T  27303006 gaagaaaattcattttaagttcctaggagttttcagacggaagaacgat 27303054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 1695817 - 1695684
Alignment:
Q  56 aaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatt 155  Q
    ||||||||||||||||  |||| |||||| ||||||||||||||| || ||   |||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  1695817 aaaaatcaagacatcatgtgaatgatcaacgatatgaagattgaa-ataaaacattcttagaaggttgttgaagacaatacaaagtgaataaaattcatt 1695719  T
Q  156 tcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| || |||||| |||||| |||||||||    
T  1695718 tcaagttcctaggagtttacaaacgaaagaacgat 1695684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 13064554 - 13064676
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| |  ||||||||||||||| ||||||||||| |||| || |||||||| ||||||||||||| | ||| |||||||||||| |||||    
T  13064554 aaatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggataagacgattgaagttcaatggttcttagagggtatttgaagacaattcaaag 13064653  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||| |||||| |||||||||||    
T  13064654 tgaacaaatttgatttcaagttc 13064676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 31859887 - 31859765
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||   ||| ||||||| ||  ||||||||| | |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  31859887 aaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggatatgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaag 31859788  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| || |||||||||||    
T  31859787 tgaagaaaatttatttcaagttc 31859765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 5906749 - 5906600
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| || ||| ||| ||||| ||||||||||||||| |  |||| |||||| ||||| ||||||||||| |||||||||||||| |||||||||    
T  5906749 aaatcatgtaaaccgacaaaccaagatatcacatgaaggatctagaatattaagatttaagattaatggttcttagaaggtttttgaagataatacaaag 5906650  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    | |||||| |||||||||| ||| ||  | |||||| || ||||||||||    
T  5906649 ttaagaaaattcatttcaaattcataaaaatttccagacagaagaacgat 5906600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 7024184 - 7024083
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagt 161  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| || ||||||| |||||||  |||||||| ||||| | ||||    
T  7024184 caagacatcacgtgaaggatcaaagatatgaagattgaagaccaatggttcttagaagattcttgaagataatacaagatgaagaaaattcatataaagt 7024085  T
Q  162 tc 163  Q
    ||    
T  7024084 tc 7024083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 23353750 - 23353868
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||   | ||||| ||| ||||||||||||||    
T  23353750 aaatcatgtaaatcggcaaaacaagacatcacatgaagga-caaggatatgaagattaaagatcaatagtt---agaaggtcttttaagacaatacaaag 23353845  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  23353846 tgaagaaaattcatttcaagttc 23353868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 46647344 - 46647420
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||    
T  46647344 caagacatcacgtgagggatcaaagatatgaaaaatgaagatcaatggttcttaaaaggtttttaaagataatacaa 46647420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 10320183 - 10320058
Alignment:
Q  64 agacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||| |||||||||||||| ||| |||| ||||||| | ||||||| ||| ||||| || ||| ||||||||||||||||||| || |||||||||||    
T  10320183 agacataacatgaaggatcaaggatgtgaaaattgaagtt-aatggttgttagaaggtcttcgaaaacaatacaaagtgaagaaaatttatttcaagttc 10320085  T
Q  164 gtatgagtttccaaacggaagaacgat 190  Q
     || ||||||||| | || ||||||||    
T  10320084 ctaggagtttccagaaggtagaacgat 10320058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 33519158 - 33519276
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||||||| ||||| | ||||| ||  | ||||||| |||||||||||||| ||||||| ||||| ||||||||||||||||      
T  33519158 aaatcatgtgaatcggcaaatcaaaacatctcttgaagaattgaggatatgacgattgaagatcaatcgttcttagaaggtctttgaagacaatacaagt 33519257  T
Q  141 tgaagaaatttcatttcaa 159  Q
    |||||||| ||||||||||    
T  33519258 tgaagaaaattcatttcaa 33519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 17187301 - 17187422
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| |||  || ||||||  |||| |||  | |||||||||||||||| ||| ||||||||| ||| | ||||||||||||||||||    
T  17187301 aaatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggatatgaagattgaagttcagtggttcttagaagttatttgaagacaatacaaag 17187400  T
Q  141 tgaagaaatttcatttcaagtt 162  Q
    | |||||| |||||||||||||    
T  17187401 taaagaaaattcatttcaagtt 17187422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 17339792 - 17339707
Alignment:
Q  50 taatcgaaaaatcaagacatcacatgaaggatcaa-agatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 134  Q
    ||||||| ||| ||||| ||||||||||||||||| ||||||| ||| ||||||||| || |||||||||| ||||||||||||||    
T  17339792 taatcgacaaagcaagatatcacatgaaggatcaagagatatggagaatgaagatcagtgattcttaaaagatttttgaagacaat 17339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 9782968 - 9782849
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    |||||||| |||| | ||||||||||||||  || ||||||||||||  ||||| ||||||||||| |||||||| |||||| || || | ||| |||||    
T  9782968 aatcatgtaaatcaacaaatcaagacatcatgtggaggatcaaagat--gaagaattgaagatcaagggttcttagaaggttgttaaaaa-aatgcaaag 9782872  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  9782871 tgaagaaaattcatttcaagttc 9782849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 21077360 - 21077483
Alignment:
Q  40 aaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    |||||||||| ||| |  ||| ||||||| ||  || |||||| ||| ||||| ||||||| |||||||||||||| |||||  | ||||||||||||||    
T  21077360 aaaatcatgtaaattggcaaaacaagacaccaagtggaggatcgaagttatgaggattgaatatcaatggttcttagaaggtaatcgaagacaatacaaa 21077459  T
Q  140 gtgaagaaatttcatttcaagttc 163  Q
     |||| ||| ||||||||||||||    
T  21077460 ttgaataaaattcatttcaagttc 21077483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 29437599 - 29437711
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||  ||||||||||| ||||||||| | |||||||||||||||| |||||||||||||          |||||||||||||||    
T  29437599 aaatcatgtaaatcggcaagacaagacatcacgtgaaggatcgaggatatgaagattgaagttcaatggttctta----------gaagacaatacaaag 29437688  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||| ||||||    
T  29437689 tgaagaaacttcatttgaagttc 29437711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 9288338 - 9288412
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctta 115  Q
    ||||||||| |||||  ||| ||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||    
T  9288338 aaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaagattgaagaccaatggttctta 9288412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 22119782 - 22119870
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||| || |||||||| ||||||||||||||||||||| | ||||||||| ||||||| |||||| | ||| || |||||||||||    
T  22119782 tgaaggattaaggatatgaatattgaagatcaatggttcttagagggtttttgaggacaata-aaagtgtacaaaattaatttcaagttc 22119870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 26159905 - 26160005
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagt 161  Q
    ||||||||||  ||||||||  | |||||||||||||||||||||||||||||| ||||| ||||||  ||| | ||  |||||||| ||||||||||||    
T  26159905 caagacatcatgtgaaggattcaggatatgaagattgaagatcaatggttcttataaggtctttgaaatcaa-ataagttgaagaaaattcatttcaagt 26160003  T
Q  162 tc 163  Q
    ||    
T  26160004 tc 26160005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 32021954 - 32022018
Alignment:
Q  73 atgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||||||  ||||||||| ||||||||||||||||  |||||| |||||||||||||||||    
T  32021954 atgaaggatcaagtatatgaagaatgaagatcaatggttccaaaaagg-ttttgaagacaatacaa 32022018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 18444399 - 18444451
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 114  Q
    ||||||||||| ||||||||| | ||||  |||||||||||||||||||||||    
T  18444399 caagacatcacgtgaaggatcgatgatacaaagattgaagatcaatggttctt 18444451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 10576581 - 10576678
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||| |||| ||||| |||| ||||||||||  ||||||||| | |||||||||| | |||| | ||| || ||| ||||||||||||| ||| ||||    
T  10576581 aaattatgtaaatcggaaaaacaagacatcatgtgaaggatcgaggatatgaagaataaagaactatgatttttagaaggtttttgaaggcaacacaa 10576678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 13275672 - 13275631
Alignment:
Q  97 tgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  13275672 tgaagatcaatggttctttgaagttttttgaagacaatacaa 13275631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 19219176 - 19219079
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaa 159  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  19219176 caagacatcacatgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagtgaataaaattcatttcaa 19219079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 19263876 - 19263769
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaagg---tttttgaagacaatacaaagtgaagaaatttcat 154  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| || ||||   ||||| |||||||||||||||||||||| |||||    
T  19263876 aaatcaagtcatcacatgaaggatcaaggatatgaagattgaagatcaatggttcatagaaggtttttttttaagacaatacaaagtgaagaaaattcat 19263777  T
Q  155 ttcaagtt 162  Q
    ||||||||    
T  19263776 ttcaagtt 19263769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 10341915 - 10342064
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||| | ||||| | ||||||  |||||||| || ||||  |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10341915 aaatcatgtaaatcaacaaatccaaacatcaagtgaaggattaaggatagaaagattgaagatcagtggttcttagaaggtttttgaagacaatacaaag 10342014  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||  |||  ||||||||||||| || ||||||| | |||||||||||||    
T  10342015 tgagaaaaactcatttcaagttcctaggagtttctagacggaagaacgat 10342064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 18474298 - 18474420
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||  |||||||| |||||||||||| ||||| | |||||||||  |||||||| |||| ||||| ||||||||||||||||||    
T  18474298 aaatcatgtaaatcgggaacacaagacattacatgaaggatcgaagatgtaaagattgaatttcaatggtacttagaaggtatttgaagacaatacaaag 18474397  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  18474398 tgaagaaaattcatttcaagttc 18474420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 19543110 - 19542988
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    |||||||||||||||  ||  ||||||||||||||||||||| |  || | |||||||||  ||||| ||||||| ||||| ||||||||||||||||||    
T  19543110 aaatcatgttaatcgggaacacaagacatcacatgaaggatcgagaatgtaaagattgaatttcaatagttcttagaaggtatttgaagacaatacaaag 19543011  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  19543010 tgaagaaaattcatttcaagttc 19542988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 18065925 - 18066072
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctta-aaaggtttttgaagacaatacaaa 139  Q
    ||||||||| ||| || ||||||||||||||||| ||||||||| || | | | ||| |||| |||||||||||| |||| |||||||||| ||||||||    
T  18065925 aaatcatgtaaatagacaaatcaagacatcacataaaggatcaatgacaagga-attaaagaccaatggttcttagaaagttttttgaagaaaatacaaa 18066023  T
Q  140 gtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacg 188  Q
    ||||||||| |||||||||| ||| || ||||||||||||  |||||||    
T  18066024 gtgaagaaaattcatttcaacttcctaggagtttccaaaccaaagaacg 18066072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 11474975 - 11475078
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||| ||| | ||||||||||||||||||    
T  11474975 aaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaagatatttgaagacaatacaaag 11475074  T
Q  141 tgaa 144  Q
    ||||    
T  11475075 tgaa 11475078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 16970591 - 16970697
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| ||||||||||||||  ||||||||||| ||||||||| ||||||| ||| |||||||| |||||||||||||| |||||||  |    
T  16970591 aatcatgtaaatcgacaaatcaagacatcatgtgaaggatcaaggatatgaagtttgaagaccaacggttcttagaaggtttttgaagaaaatacaagat 16970690  T
Q  142 gaagaaa 148  Q
    |||||||    
T  16970691 gaagaaa 16970697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 33914553 - 33914405
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||| ||||||||| |||||  ||||||||| | | |||  ||||||||| ||| |||||    
T  33914553 aaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaaggatatgaaggttgaa-ttcaatggttttaagaagaattttgaagataattcaaag 33914455  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    | | |||| ||||||||| | || |||||||||||| |||||||||||||    
T  33914454 taaggaaaattcatttcaggctcttatgagtttccatacggaagaacgat 33914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 25883285 - 25883377
Alignment:
Q  95 attgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| ||||||    
T  25883285 attgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgaaagaac 25883377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 1475248 - 1475117
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||  ||||||||||| |||  ||||| |||||||||||  ||||||| |||||| ||||||| ||||||||||||||||| || ||||    
T  1475248 aaatcaagacatcatgtgaaggatcaaggat--gaagagttgaagatcaagagttcttagaaggttattgaagataatacaaagtgaagaaaatttattt 1475151  T
Q  157 caagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||| || |||||| || ||| |||||||||    
T  1475150 caagttcctaggagttttcagacgaaagaacgat 1475117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 21018006 - 21018154
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| | || | |||||||||||| || ||||||||||| |||||||| |||||||| ||||||||  || ||  |||||||||| ||||||||     
T  21018006 aaatcatgtaattcaacaaatcaagacattacgtgaaggatcaatgatatgaa-attgaagaccaatggtttctataacttttttgaagataatacaaaa 21018104  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||| || |||||||||||||| || || ||| |||| |||||||||||    
T  21018105 tgaaggaaattcatttcaagttcctaggaatttacaaatggaagaacgat 21018154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 25919456 - 25919345
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||| | || ||| || ||||||||||| ||| ||||||    
T  25919456 aatcatgtaaatcgacaaaccaagatatcacatgaaggatcaaggatatgaagattgaagatcaacgatttttagaa-gtttttgaagataatgcaaagt 25919358  T
Q  142 gaagaaatttcat 154  Q
    || |||| |||||    
T  25919357 gacgaaaattcat 25919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 188
Target Start/End: Complemental strand, 23908257 - 23908110
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| || ||  ||| ||||||||| |||||||||||||  ||||||||||| ||||||||||||| ||| || ||||||||||||||||||||     
T  23908257 aaatcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatacaaat 23908158  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacg 188  Q
    ||  |||| |||||| ||| |||  | || |||| ||| |||||||||    
T  23908157 tggggaaaattcattccaaattccaaggaatttcaaaaaggaagaacg 23908110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 8402537 - 8402415
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt-aaaaggtttttgaagacaatacaaag 140  Q
    |||| ||| |||||| | ||||||||||||  ||||||||| | ||||||||||||||||| | |||||||||  |||||| |||||||| |||| ||||    
T  8402537 aatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatgaagattgaagaactatggttcttcgaaaggtatttgaagaaaatataaag 8402438  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||  ||||||||||||||    
T  8402437 tgaagaacattcatttcaagttc 8402415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 26418848 - 26418946
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    ||||||||| ||||| ||||  |||||||| ||||||||||||| |||||||||||| |||||  |||||||||| ||||||||| |||| ||||||||    
T  26418848 aaatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaagattaaagattgatggttcttagaaggtttttaaagaaaatacaaa 26418946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 21829098 - 21829025
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 135  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||| |  ||||| |||||||||||||    
T  21829098 caagacatcacatgaagtatcaaggatatgaagattgaagatcaatggttcatcgaaggtctttgaagacaata 21829025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 11521350 - 11521442
Alignment:
Q  98 gaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||||| |||| ||| |||||| ||||||| ||||||||| ||||||| |||||||||||||| || |||||| || |||||||||||||    
T  11521350 gaagatcaagggttgttagaaggttgttgaagataatacaaagcgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgat 11521442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 5632528 - 5632407
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||| |||||||||||||| || ||  |  |||| ||||||||||| ||| |||||||| ||||| |||||||| |||| |||     
T  5632528 aaatcatgtaaatcgacaaaccaagacatcacatggagaattgataatataaagattgaaga-caacggttcttataaggtatttgaagataataaaaat 5632430  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  5632429 tgaagaaaattcatttcaagttc 5632407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 25188906 - 25188983
Alignment:
Q  62 caagacatcacatgaaggatcaaaga-tatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||||||||||| |||||||||| || |||||||| |||| ||||||||||||||| |||||||| ||||||||||||    
T  25188906 caagacatcacaagaaggatcaaggaatatgaagaatgaatatcaatggttcttaagaggttttttaagacaatacaa 25188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 27415297 - 27415444
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| ||  |||||||||||||||| ||||||||| |||| | | |||||||| || | ||||||| || ||||||| ||||| || ||||    
T  27415297 aaatcatgtaaatagaccaatcaagacatcacataaaggatcaaggataagga-attgaagaccattagttcttagaatgtttttggagaca-taaaaag 27415394  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| |||||||||| ||| || ||||||| | ||| |||||||||    
T  27415395 tgaagaaaattcatttcaacttcctaggagtttcaagacgaaagaacgat 27415444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 28422581 - 28422685
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    |||||||||  ||||| ||||||| ||||||| ||||||||  | |||||||||||||||| ||||| | | ||| ||||| ||||||||||||||||||    
T  28422581 aaatcatgtagatcgacaaatcaatacatcacgtgaaggattgaggatatgaagattgaagttcaat-gatgttagaaggtatttgaagacaatacaaag 28422679  T
Q  141 tgaaga 146  Q
    ||||||    
T  28422680 tgaaga 28422685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 2729571 - 2729484
Alignment:
Q  81 tcaaagatatgaagattgaagatcaatggttcttaaaaggtttttg--aagacaatacaaagtgaagaaatttcatttcaagttcgta 166  Q
    |||| |||||||| |||||||||||| |  |||||||||||||||   |||||||||||||||||| |||  ||||||||||||||||    
T  2729571 tcaaggatatgaatattgaagatcaacgactcttaaaaggttttttttaagacaatacaaagtgaataaaaatcatttcaagttcgta 2729484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 30493218 - 30493132
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaag 160  Q
    ||||||||| |||||||||||||| ||||| || |||||||| |||   ||||||||| ||| |||||||||||| |||||| ||||    
T  30493218 tgaaggatcgaagatatgaagattaaagattaacggttcttagaagacatttgaagacgatataaagtgaagaaaattcattgcaag 30493132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 13911403 - 13911530
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttc 157  Q
    |||||||||||||  |||||||||||| |||||||||||| ||  | ||||||||||| |||  |||| |||||||||| |  | |||||| ||||||||    
T  13911403 aaatcaagacatcttatgaaggatcaaggatatgaagatt-aaattaaatggttcttagaagaattttcaagacaatacgatctaaagaaa-ttcatttc 13911500  T
Q  158 aagttcgtatgagtttccaaacggaagaac 187  Q
    | ||||  | ||||||||||| ||||||||    
T  13911501 atgttccaaggagtttccaaatggaagaac 13911530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 12573472 - 12573540
Alignment:
Q  95 attgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||||||| | || ||| |||||| |||||||||||||| |||||||||| || |||||||||||    
T  12573472 attgaagatcaaggtttgttagaaggttgttgaagacaatacacagtgaagaaaatttatttcaagttc 12573540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 13549936 - 13550004
Alignment:
Q  95 attgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||||||| | || ||| |||||| |||||||||||||| |||||||||| || |||||||||||    
T  13549936 attgaagatcaaggtttgttagaaggttgttgaagacaatacacagtgaagaaaatttatttcaagttc 13550004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 26387810 - 26387758
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 114  Q
    ||||||||||  |||||||||||||||||||| ||||||||| ||||||||||    
T  26387810 caagacatcaagtgaaggatcaaagatatgaatattgaagattaatggttctt 26387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 19285270 - 19285322
Alignment:
Q  85 agatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaataca 137  Q
    |||||| ||||||||  |||||||||||||  ||||| |||||||||||||||    
T  19285270 agatatcaagattgataatcaatggttcttggaaggtatttgaagacaataca 19285322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 21527 - 21647
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21527 aatcatgtaaatcgacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaagacaatacaaagt 21626  T
Q  142 gaagaaatttcatttcaagtt 162  Q
     |||||  |||||||||||||    
T  21627 taagaatattcatttcaagtt 21647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 6323 - 6456
Alignment:
Q  40 aaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| || ||| |||||||||| ||||||||    
T  6323 aaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcctagaagatttttgaagaaaatacaaa 6421  T
Q  140 gtgaagaaatttcatttcaagttcgtatgagtttc 174  Q
    |||||||||  ||| ||||||||| || |||||||    
T  6422 gtgaagaaaaatcaattcaagttcctaggagtttc 6456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 30355455 - 30355591
Alignment:
Q  51 aatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatt 150  Q
    |||||| ||| |||||| |||||||||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||| |    
T  30355455 aatcgacaaaccaagacctcacatgaaggatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaagacaataaaaagtgaataaaat 30355554  T
Q  151 tcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
    |||||||||||||  | ||||||||| ||||||||||    
T  30355555 tcatttcaagttcacaggagtttccagacggaagaac 30355591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 26499833 - 26499712
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||  |||||  ||| ||||| | ||| |||| |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26499833 aaatcatgcaaatcggcaaaacaagataccacgtgaaagatcgaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaag 26499734  T
Q  141 tgaagaaatttcatttcaagtt 162  Q
    | |||||| |||||||||||||    
T  26499733 taaagaaaattcatttcaagtt 26499712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 17860434 - 17860286
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| | || | |||||| |||||||| |||||||| ||  ||| ||| |||||||  |||||||||||| |||||||||| |||||||||||||    
T  17860434 aaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaa-attgaaggacaatggttcttagaaggtttttgtagacaatacaaag 17860336  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| |||||||||||||| || |||||||||  || |||||||||    
T  17860335 tgaagaaaattcatttcaagttcctaggagtttccagtcgaaagaacgat 17860286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 15575070 - 15575174
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcattt 156  Q
    ||||||||||||||| ||||||||||| |||  ||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||||||| |||||||    
T  15575070 aaatcaagacatcacgtgaaggatcaacgat--gaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcattt 15575167  T
Q  157 caagttc 163  Q
    |||||||    
T  15575168 caagttc 15575174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 33638491 - 33638388
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| ||| | ||||  ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  33638491 aaatcatgtaaatcggcaaaacaatatatcaagtgaaggatcaaggatatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaag 33638392  T
Q  141 tgaa 144  Q
    ||||    
T  33638391 tgaa 33638388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 24507428 - 24507307
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||| ||| |||| | ||||||||||||||| ||||||||  | ||||||||||||||||| |||||||| ||| ||| ||| |||||| |||||||||    
T  24507428 aaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaagttttatgaagaaaatacaaag 24507330  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| || |||||||||||    
T  24507329 tgaagaaaatttatttcaagttc 24507307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 33638259 - 33638317
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaa 144  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  33638259 gatatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagtgaa 33638317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 16439586 - 16439683
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||| ||||  |||| |||||||||| ||||| |||||  |||||||||| ||||||||||||||||||| || | ||||||||| |||||||    
T  16439586 aaatcatgtaaatcagaaaaacaagacatcagatgaaagatcagggatatgaagaatgaagatcaatggttcttagaatggttttgaagaaaatacaa 16439683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 14924383 - 14924307
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||||||||| |||||| | || ||||||||| |||||||||||||||||| |  || |||||||||||||||||||    
T  14924383 caagacatcaaatgaagaaccagagatatgaaaattgaagatcaatggttcatggaatgtttttgaagacaatacaa 14924307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 15998657 - 15998769
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttc 157  Q
    ||||||||||||||  |||| |||||| |||| |||  ||||||| ||  || ||||| |||||| ||| |||||||||||||||||| || ||||||||    
T  15998657 aaatcaagacatcatgtgaatgatcaaggataagaa--ttgaagaccatgggctcttagaaggttgttgtagacaatacaaagtgaagcaaattcatttc 15998754  T
Q  158 aagttcgtatgagtt 172  Q
    |||||| || |||||    
T  15998755 aagttcctaggagtt 15998769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 12972371 - 12972298
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 114  Q
    ||||||||| ||||  |||| |||||||| || |||| |||| | |||||||||||||||||||||||||||||    
T  12972371 aaatcatgtaaatcagaaaaccaagacataacgtgaaagatcgatgatatgaagattgaagatcaatggttctt 12972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 16387241 - 16387120
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  |||||||||||| |  ||| ||||||| ||||||||| || |||| ||||||| ||||||||| |||| |||| |||| |       
T  16387241 aaatcatgtaaatcggcaaatcaagacattaggtgagggatcaaggatatgaagtttaaagaccaatggtccttaaaaggatttttaagaaaatatagga 16387142  T
Q  141 tgaagaaatttcatttcaagtt 162  Q
    |||||||| ||| |||||||||    
T  16387141 tgaagaaaattcgtttcaagtt 16387120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 9396572 - 9396496
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||||| ||||||||||| || | ||||| |||||||||| | |||||| ||  ||||||||||||||||||    
T  9396572 caagacatcacgtgaaggatcaaggacaagaagaatgaagatcaacgattcttagaaattttttgaagacaatacaa 9396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 26512732 - 26512668
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||||||| | |||| |||||||||    
T  26512732 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatacaa 26512668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 26517848 - 26517784
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||||||| | |||| |||||||||    
T  26517848 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatacaa 26517784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 24618056 - 24618117
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaa 147  Q
    ||||||||||||||||||||||| |||||| ||| | ||| ||||||||||||  |||||||    
T  24618056 gatatgaagattgaagatcaatgattcttagaagatctttaaagacaatacaagttgaagaa 24618117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 32930399 - 32930334
Alignment:
Q  73 atgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||| |||||||||||||||||  |||| ||||||| |||||  ||||||||| ||||||||||||    
T  32930399 atgagggatcaaagatatgaaggatgaaaatcaatgattcttggaaggtttttaaagacaatacaa 32930334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 4e-37; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 16052263 - 16052117
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||| | |||| | |||||||||||||||||||||||| || |||||||||||| |||| ||||| |||||| |||||||||||||||||||||||     
T  16052263 aaatcatctaaatcaacaaatcaagacatcacatgaaggataaaggatatgaagattaaagaccaatgattcttagaaggtttttgaagacaatacaaaa 16052164  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
    |||||||| |||||||||||||| |  ||||||| | ||||||||||    
T  16052163 tgaagaaaattcatttcaagttccttggagtttctagacggaagaac 16052117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 187
Target Start/End: Complemental strand, 28901324 - 28901190
Alignment:
Q  52 atcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaattt 151  Q
    ||||| |||||||||||||| |||||| ||||| |||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  28901324 atcgacaaatcaagacatcatatgaagaatcaatgatatgaagattgaat-tcaatggttcttataaggtttctgaagacaatacaaagtgaagaaaatt 28901226  T
Q  152 catttcaagttcgtatgagtttccaaacggaagaac 187  Q
    ||||||||| || || ||||||| | ||||||||||    
T  28901225 catttcaagctcctaggagtttctagacggaagaac 28901190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 11310224 - 11310094
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttc 157  Q
    ||||||||||||||  ||||||||||| |||||||||||| ||| |||||| |||||| |||||||||||| ||||||||||||||||||| || |||||    
T  11310224 aaatcaagacatcatgtgaaggatcaaggatatgaagatttaag-tcaatgattcttagaaggtttttgaaaacaatacaaagtgaagaaaatt-atttc 11310127  T
Q  158 aagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||| || ||||||| | |||||||||||||    
T  11310126 aagttcctaggagtttctagacggaagaacgat 11310094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 28902218 - 28902366
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||| | ||||| ||||||||| ||||||||||| ||||| || ||| |||| |||||||||||| |||||| |||||||||||||||||    
T  28902218 aaatcatgtaaatcaacaaatcgagacatcacgtgaaggatcaatgatattaa-attaaagaccaatggttcttagaaggttattgaagacaatacaaag 28902316  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||| ||| ||||||| |||||| || |||||| || ||| |||||||||    
T  28902317 tgaataaaattcattttaagttcctaggagttttcagacgaaagaacgat 28902366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 32239416 - 32239537
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||| ||| ||| || ||||| |||||||||||||||||| || |||||||||||||||| ||||||||| ||| |||||| || ||||||||| ||||    
T  32239416 aaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataaggttcttaaagacaataaaaag 32239515  T
Q  141 tgaagaaatttcatttcaagtt 162  Q
    |||||||| |||||||||||||    
T  32239516 tgaagaaaattcatttcaagtt 32239537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 22894516 - 22894396
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||| ||||| |||||||||  ||||| ||||||| | ||||||||||||||||||||||    
T  22894516 aaatcatgtaaatcgaaaa-tcaagatatcacatgaaggatcaatgatataaagattgaat-tcaattgttcttagatggtttttgaagacaatacaaag 22894419  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||| ||| ||||||    
T  22894418 tgaagaaaattcttttgaagttc 22894396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 24696710 - 24696832
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||| | ||||||||||||||||| ||||||||| ||||||||||||||||| || | ||||||| |||||||||||||| |||||||||    
T  24696710 aaatcatgtaaatcaacaaatcaagacatcacataaaggatcaaggatatgaagattgaagaccacttgttcttagaaggtttttgaagaaaatacaaag 24696809  T
Q  141 t-gaagaaatttcatttcaagtt 162  Q
    |  || ||| |||||||||||||    
T  24696810 taaaaaaaaattcatttcaagtt 24696832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 28292086 - 28291965
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||  |||  |||||||||||||||||||  | |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |    
T  28292086 aatcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaatacaaaat 28291987  T
Q  142 gaagaaatttcatttcaagttc 163  Q
    ||||||| |  |||||||||||    
T  28291986 gaagaaaataaatttcaagttc 28291965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 30543889 - 30544012
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttc-ttaaaaggtttttgaagacaatacaaa 139  Q
    ||||||||| |||||  ||| ||||| ||||||||||||||  | |||||||||||||||| |||||||||| ||||||| | ||| ||||||||| |||    
T  30543889 aaatcatgtaaatcggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctttaaaagatatttaaagacaatataaa 30543988  T
Q  140 gtgaagaaatttcatttcaagttc 163  Q
    ||||||||| ||||||||||||||    
T  30543989 gtgaagaaaattcatttcaagttc 30544012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 28859225 - 28859119
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| || ||| | | ||||||||||||||||||| ||||| |||||| ||||||||||||||||| | ||||||||||||||||| ||||    
T  28859225 aaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatatcaagattaaagatcaatggttcttagatggtttttgaagacaataaaaag 28859126  T
Q  141 tgaagaa 147  Q
    |||||||    
T  28859125 tgaagaa 28859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 13583506 - 13583403
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||| ||||||||||  ||||||||| | ||||||| |||||||| ||||||||||||| ||| | ||||||||||||||||||    
T  13583506 aaatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattgaagttcaatggttcttagaagatatttgaagacaatacaaag 13583407  T
Q  141 tgaa 144  Q
    ||||    
T  13583406 tgaa 13583403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 16054476 - 16054571
Alignment:
Q  95 attgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||||||| |||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||| || ||||||||| ||  |||||||||    
T  16054476 attgaagatcaagggttcttagaaggttgttgaagaaaatacaaagtgaagaaaattcatttcaagttcctaggagtttccagacaaaagaacgat 16054571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 12956610 - 12956732
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||| | |||||| ||| ||||| ||||||||||| ||||| |||||||||| ||||||||||| ||| ||  ||||||||| |||| ||||||||||    
T  12956610 aatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaagataatacaaagt 12956709  T
Q  142 gaaga-aatttcatttcaagttc 163  Q
    ||||| || ||||||||||||||    
T  12956710 gaagagaaattcatttcaagttc 12956732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 29291898 - 29292016
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| ||||| ||||| ||||| ||| | |||||||| ||||||||||||||||||||| ||||| ||||||||||| | ||||    
T  29291898 aaatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttgaagacaacagaaag 29291997  T
Q  141 tgaagaaatttcatttcaa 159  Q
    |||| ||| ||||||||||    
T  29291998 tgaaaaaaattcatttcaa 29292016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 14977092 - 14976952
Alignment:
Q  44 tcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtga 143  Q
    |||||| ||| || |||||||||||||||||||| |||||| || |||||||||||| ||||||| || ||   ||||||||||||| ||||||||||||    
T  14977092 tcatgtaaattgacaaatcaagacatcacatgaaagatcaaggacatgaagattgaaaatcaatgattttt---aggtttttgaagataatacaaagtga 14976996  T
Q  144 agaaatttcatttcaagttcgtatgagtttccaaacggaagaac 187  Q
     |||| || |||||||| |  ||  |||||||| ||||||||||    
T  14976995 tgaaaattaatttcaagcttctagaagtttccagacggaagaac 14976952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 30851053 - 30850964
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    ||||||||||| ||||||||||||||||||||| |||||||| || || |||||| | ||||||||||||||||| || |||||||||||    
T  30851053 tgaaggatcaaggatatgaagattgaagatcaacggttcttagaatgtctttgaatataatacaaagtgaagaaaattaatttcaagttc 30850964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 13081887 - 13081788
Alignment:
Q  74 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagttt 173  Q
    ||||||||||||||||   | |||||||||||| |||||||| |||||| |||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  13081887 tgaaggatcaaagataaata-attgaagatcaagggttcttagaaggttgttgaagacaatacaaaatgaagaaaattcatttcaagtttctatgagttt 13081789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 24120353 - 24120501
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||  ||||||  |||||||||||||  ||||||||||| ||||| ||  ||||| | ||||| |||||| |||||||| ||||| |||| ||  |    
T  24120353 aatcatgcaaatcgaccaatcaagacatcatgtgaaggatcaaggatattaattttgaataccaatgtttcttagaaggttttcgaagataataaaagat 24120452  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    ||||||| |||||||||||||| || || |||||| |||||||||||||    
T  24120453 gaagaaaattcatttcaagttcctaggaatttccagacggaagaacgat 24120501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 6888179 - 6888059
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||| | ||| |||  |||||| || || ||| | ||||||||||||||||||||||||||||||||| || ||||||||||||||||      
T  6888179 aaatcatgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaagattgaagatcaatggttcttaaaatgtctttgaagacaatacaagt 6888080  T
Q  141 tgaagaaatttcatttcaagt 161  Q
    |||||||| | | ||||||||    
T  6888079 tgaagaaaatccgtttcaagt 6888059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 11437547 - 11437670
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaa-ggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaa 139  Q
    ||||||||| |||||  ||| ||||||||||  |||| ||||||| |||||||| ||||||| ||||||||||||| |||   ||||||||||||||| |    
T  11437547 aaatcatgtaaatcggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaatacaga 11437646  T
Q  140 gtgaagaaatttcatttcaagttc 163  Q
    ||||||| | ||||||| ||||||    
T  11437647 gtgaagataattcatttgaagttc 11437670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 14424799 - 14424684
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| ||||||| ||   |||||||  | |||| ||||||||||||||||||||||||| |||||||||||| ||||| ||| |    
T  14424799 aaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaacacaattcaatg 14424700  T
Q  141 tgaagaaatttcattt 156  Q
    |||||||| |||||||    
T  14424699 tgaagaaaattcattt 14424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 5153886 - 5154008
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| |  ||| |||||||| |  ||||||||| | ||||||||||||||||||||||| || ||  ||||||||||||||||||| ||      
T  5153886 aaatcatgtaaataggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaatataaca 5153985  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||| ||| ||||||||||||||    
T  5153986 tgaataaaattcatttcaagttc 5154008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 5570081 - 5569981
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaaga 185  Q
    ||||||||| || |||| |||||||||||| ||| ||||| ||||||||||||  |||||||| |||||||||| ||| || |||||| || ||||||||    
T  5570081 gatatgaagtttaaagaccaatggttcttagaagctttttaaagacaatacaagatgaagaaaattcatttcaacttcataggagttttcagacggaaga 5569982  T
Q  186 a 186  Q
    |    
T  5569981 a 5569981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 27097786 - 27097666
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||  ||| ||||||||||| ||| ||||  |  ||||||||||||||  | ||| ||||||| ||||| ||||||||||||||||      
T  27097786 aaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaagattgaa--tgaatagttcttagaaggtctttgaagacaatacaagt 27097689  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| |||| |||||||||    
T  27097688 tgaagaaaattcaattcaagttc 27097666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 31436646 - 31436719
Alignment:
Q  86 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||||||||| ||||||||||||||   |||| |||||||||||||||||||||| ||| || |||||||||||    
T  31436646 gatatgaagattgacgatcaatggttctt---aggtatttgaagacaatacaaagtgaaaaaaatt-atttcaagttc 31436719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 28074662 - 28074738
Alignment:
Q  62 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||||||||| |||||||||||| |||||||||| ||||||||| |||| ||||  |||||||  |||| |||||||    
T  28074662 caagacatcaaatgaaggatcaaggatatgaagaatgaagatcagtggtccttacgaggttttgaaagataatacaa 28074738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 28260276 - 28260178
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    ||||||||| ||||   ||| ||||||||||| || ||||||||  |||| ||  ||||||||||||| ||||||| || ||||||||||| |||||||    
T  28260276 aaatcatgtaaatcagcaaaacaagacatcacgtggaggatcaagtatatcaaatattgaagatcaatagttcttataaagtttttgaagataatacaa 28260178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 29047267 - 29047178
Alignment:
Q  101 gatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||| | |||||| |||||||||||||||||| |||| ||||||||   || |  |||||| ||||||||||||| |  |||||||||    
T  29047267 gatcaaggattcttataaggtttttgaagacaatgcaaaatgaagaaaaaccaatctaagttcctatgagtttccaagcaaaagaacgat 29047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 35135407 - 35135310
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaa 138  Q
    |||||| || |||||| ||| ||||||||||| || |||||  | | |||| ||| |||| |||||||||| |||  ||||||||||||||| |||||    
T  35135407 aaatcaggtaaatcgacaaaacaagacatcacgtggaggattgagggtatggagaatgaaaatcaatggttattaggaggtttttgaagacagtacaa 35135310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 12774829 - 12774737
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagata-tgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 135  Q
    |||| |||| ||||| |||| |||| |||||| || | ||||||||||| | |||||||||||||||||| ||||||||  | |||||||||||||    
T  12774829 aaataatgtaaatcggaaaaacaagtcatcacgtggaagatcaaagataatcaagattgaagatcaatgg-tcttaaaa--tatttgaagacaata 12774737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 5755 - 5607
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| ||| || |||| |||||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||| |||| |||||||||    
T  5755 aaatcatgtaaattgacaaataaagacatcacatgaaggatcgaggatatgaagattgaat-tcaatggttcttagaaggtctttaaagaaaatacaaag 5657  T
Q  141 tgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||||| |||| |||||||| ||| |||||| || |||||||||||||    
T  5656 tgaagaaaattcaattcaagtttgtaggagttttcagacggaagaacgat 5607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 26941 - 26809
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| |||| |||||||||| |||| |||||| |||||||| ||||||| ||||||||||||| || ||| |||||||||||||||||    
T  26941 aaatcatgtaaatcgacaaattaagacatcacgtgaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagacaatacaaag 26842  T
Q  141 tgaagaaatttcatttcaagttcgtatgagttt 173  Q
    |||||||| ||| |||||||||| || ||||||    
T  26841 tgaagaaaattcgtttcaagttcataggagttt 26809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 228172 - 228051
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||||||||| ||||||||| |   |||||| |||||||| |||||||||||| ||||| ||||||||||||||||||    
T  228172 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgtatgaatattgaaga-caatggttcttagaaggtatttgaagacaatacaaag 228074  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| ||||||||||||||    
T  228073 tgaagaaaattcatttcaagttc 228051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 22582 - 22451
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttc 157  Q
    ||||||||||||||| ||||| ||||| |||||||||| ||||| |||||||||| || ||||||||| |||||||||||| ||||||||| ||||||||    
T  22582 aaatcaagacatcacgtgaagaatcaaggatatgaagaatgaag-tcaatggttcatagaaggttttttaagacaatacaaggtgaagaaaattcatttc 22484  T
Q  158 aagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||||| || || |||||| | |||||||||||    
T  22483 aagttcctaggattttccagagggaagaacgat 22451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 12373 - 12494
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||||||||||||||| ||||||||  | ||||||||||| ||||| |||||||| ||| ||| ||| |||||| |||||||||    
T  12373 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaagatcgaaga-caatggttgttagaagttttatgaagaaaatacaaag 12471  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| || |||||||||||    
T  12472 tgaagaaaatttatttcaagttc 12494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 8694 - 8546
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagt 141  Q
    |||||||| |||||| |||||||||||| | |||||||||||| || || ||| || ||||  |||  | |||||||||||||||||||||||||||  |    
T  8694 aatcatgtaaatcgacaaatcaagacataaaatgaaggatcaaggaaataaagtttaaagacaaatattccttaaaaggtttttgaagacaatacaagat 8595  T
Q  142 gaagaaatttcatttcaagttcgtatgagtttccaaacggaagaacgat 190  Q
    |||| || |||||||| ||||| || || ||| ||||||||||||||||    
T  8594 gaaggaaattcatttcgagttcctaggaattttcaaacggaagaacgat 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 190
Target Start/End: Complemental strand, 11746 - 11636
Alignment:
Q  80 atcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaac 179  Q
    ||||| ||||| |||| |||| || ||| ||||||| ||||||||||||| |||| |||  ||| |||| |||||||| ||||| || || |||||| ||    
T  11746 atcaaggatattaagaatgaatataaatagttcttagaaggtttttgaagtcaatgcaagatgacgaaagttcatttcgagttcctaggaatttccagac 11647  T
Q  180 ggaagaacgat 190  Q
    |||||||||||    
T  11646 ggaagaacgat 11636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 13056 - 13014
Alignment:
Q  42 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaa 84  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  13056 aatcatgtaaatcgacaaatcaagacatcacatgaaggatcaa 13014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 11684 - 11564
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||||||| |||||| ||| ||||||||||  | ||||||  |  || ||||||||||| ||||||| |||||| ||||| ||||||||||||||||||    
T  11684 aaatcatgtaaatcgacaaaacaagacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaatacaaag 11585  T
Q  141 tgaagaaatttcatttcaagt 161  Q
    |||||||| ||||||||||||    
T  11584 tgaagaaaattcatttcaagt 11564  T

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Target: scaffold0337 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 1937 - 2058
Alignment:
Q  41 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaag 140  Q
    ||||| ||| |||| | ||||||||||||||| ||||||||  | ||||||||||||||||| |||||||| ||| ||| ||| |||||| |||||||||    
T  1937 aaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaagttttatgaagaaaatacaaag 2035  T
Q  141 tgaagaaatttcatttcaagttc 163  Q
    |||||||| || |||||||||||    
T  2036 tgaagaaaatttatttcaagttc 2058  T

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Target: scaffold0362 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 7799 - 7892
Alignment:
Q  93 agattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttcgtatgagtttccaaacggaagaa 186  Q
    |||||||||  |||||||||||| |||||| ||||||||| |||||||| |||||| |||||||||||||| || |||||| || |||||||||    
T  7799 agattgaaggccaatggttcttagaaggttgttgaagacagtacaaagtcaagaaaattcatttcaagttcctaggagttttcagacggaagaa 7892  T

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Target: scaffold1149 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 1978 - 2037
Alignment:
Q  104 caatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    |||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||    
T  1978 caatggttcttatatggtttttgaagacaatacaaagtaaagaaaattcatttcaagttc 2037  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 447122 - 447211
Alignment:
Q  58 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaa 148  Q
    ||||||||||||||  ||||||||||| |||   || ||||||||||||  |||||||| |||||  ||||||||||||||||||||||||    
T  447122 aaatcaagacatcatgtgaaggatcaaggatgaaaa-attgaagatcaaaagttcttaacaggttactgaagacaatacaaagtgaagaaa 447211  T

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Target: scaffold0185 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 2684 - 2750
Alignment:
Q  97 tgaagatcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaagttc 163  Q
    ||||||||||||||||||| |||   ||||||||||||||| ||||||||||  |||||||| ||||    
T  2684 tgaagatcaatggttcttataagacatttgaagacaatacagagtgaagaaaactcatttcatgttc 2750  T

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Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 58898 - 58999
Alignment:
Q  65 gacatcacatgaaggatcaaagatatgaagattgaag----atcaatggttcttaaaaggtttttgaagacaatacaaagtgaagaaatttcatttcaag 160  Q
    |||||||||||||||||| |  |||||||||||||||    ||  |||||||||||||  | |||||||||||| |||| |||||||| ||||||| |||    
T  58898 gacatcacatgaaggatcgagaatatgaagattgaagtttaatatatggttcttaaaatatatttgaagacaatgcaaaatgaagaaa-ttcatttaaag 58996  T
Q  161 ttc 163  Q
    |||    
T  58997 ttc 58999  T

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