View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5024-Insertion-2 (Length: 1150)

Name: NF5024-Insertion-2
Description: NF5024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5024-Insertion-2
NF5024-Insertion-2
[»] chr6 (2 HSPs)
chr6 (8-1100)||(5574019-5575131)
chr6 (8-535)||(5569038-5569566)
[»] scaffold0020 (2 HSPs)
scaffold0020 (584-823)||(2844-3102)
scaffold0020 (583-823)||(8350-8609)
[»] chr3 (10 HSPs)
chr3 (406-530)||(30201116-30201240)
chr3 (406-530)||(30227291-30227415)
chr3 (390-531)||(29856788-29856929)
chr3 (406-530)||(30214663-30214786)
chr3 (390-529)||(29648978-29649117)
chr3 (297-340)||(30214843-30214886)
chr3 (300-341)||(30201296-30201337)
chr3 (406-454)||(30239053-30239101)
chr3 (406-443)||(36309774-36309811)
chr3 (406-443)||(36333955-36333992)
[»] chr1 (2 HSPs)
chr1 (406-481)||(16966196-16966271)
chr1 (406-481)||(16955678-16955753)
[»] chr5 (2 HSPs)
chr5 (390-529)||(11634908-11635047)
chr5 (407-459)||(16053597-16053649)
[»] chr8 (2 HSPs)
chr8 (390-494)||(1152921-1153025)
chr8 (406-530)||(14934515-14934639)
[»] chr7 (2 HSPs)
chr7 (406-530)||(16644754-16644878)
chr7 (406-530)||(17619115-17619239)


Alignment Details
Target: chr6 (Bit Score: 774; Significance: 0; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 774; E-Value: 0
Query Start/End: Original strand, 8 - 1100
Target Start/End: Original strand, 5574019 - 5575131
Alignment:
Q  8 aatcctttgataggttgcactttgaaatgttcacatcctctaaatgcggaagtttcctcacagcttcgctgaatcctttatctgaaattttcgagcactc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5574019 aatcctttgataggttgcactttgaaatgttcacatcctctaaatactgaagtttcctcacagcttcgctgaatcctttatctgaaattttcgagcactc 5574118  T
Q  108 taccagcttcatgcatcgagggttactagcactgtaaaattcgaattnnnnnnnnntgaaaattaattaaattcataaagatatttacattgcatacata 207  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  5574119 taccagcttcatgcatcgaaggttactagcactgtaaaattcgaattcaaaaaaa-tgaaaattaattaaattcataaagatatttacattgcatacata 5574217  T
Q  208 tnnnnnnnnntgataaaaattacttctcggatatgtattgaaggagacgatcggtgccaataaactcaatatcaatgtctatcaaaaatccgcaacttcg 307  Q
    |         |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5574218 taaaaaaat-tgataataattacttctcggatatgtattgaaggagacgatctgtgccaataaactcaatatcaatgtctatcaaaaatccgcaacttcg 5574316  T
Q  308 atcaacagcataacgacaaatcttcaccaaatctggaggaaagaagcgtgnnnnnnngcgacgattggtcatgttaatctgcatggtacgccacacacga 407  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||    
T  5574317 atcaacagcataatgacaaatcttcaccaaatctggaggaaagaagcgtgaaaaaaagcgacgattggtcatgttaatctgcatggtatgccacacacga 5574416  T
Q  408 ggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtctc 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5574417 ggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaatagtatcaagcctttgaaggatgttcaccgtgatgtctc 5574516  T
Q  508 ttggaagtgcaagccaatttggcatatt---------accttctacttcatttgccatcat---atatgagaaattgcatagaacggttgatagagtatg 595  Q
    ||||||||||||||||||||||||||||         ||||||||||||||||| ||||||   ||||||||||| | ||||||| |||||||| |||||    
T  5574517 ttggaagtgcaagccaatttggcatatttgttctctcaccttctacttcatttgtcatcatcatatatgagaaatcgaatagaactgttgatagtgtatg 5574616  T
Q  596 ctacatataacactagatctagggttgcaaggaaaataaacataaaagatgcaattcattcataacatgttcaagagagtctaggttaaaacagtaatgg 695  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| ||||||| ||    
T  5574617 ctacagataacactggatctagggttgcaaggaaaataaacataaaac-tgcaattcattcataacatgttcaagagagtataggttaacacagtaaggg 5574715  T
Q  696 gccatgggcctatcatttcaactactagacatataataaaaccaggattgagcactaaaggcaccccctcttttactagtaacggtagtaatcctttaac 795  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5574716 gccatgggcctatcatttcaactactagacatataataaaaccaggattgagcactaaaggcaccccctcttttactagtaacggtagtaatcctttaac 5574815  T
Q  796 caagctggtgctttgttttcccttaggattttccttcttaacaacggtcatataaattgtttcccgaattat-acgttttatagtacacactaacagtga 894  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5574816 taagctggtgctttgttttcccttaggattttccttcttaacaacggtcatataaattgtttcccgaattataacgttttatagtacacactaacagtga 5574915  T
Q  895 aaactaaacgtt--aaaattgaaactaaacgtcttggaaaataagttatgatcacgcctgtactaatctcattaaacaccagaacggattag-ataaaag 991  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||  | || || |||||||    
T  5574916 aaactaaacgtttaaaaattgaaactaaacgttttggaaaataagttatgatcacgcatgtactaatctcattaaacactagacggaataagaataaaag 5575015  T
Q  992 ttgttgtgttttc-atgataat-aaacttgtcctg-ttctca-ggtttccttgagtccataaaaaatcgagt-cttaatgttttactttattcaa-ttac 1085  Q
    ||||||||||||| |||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  5575016 ttgttgtgttttcaatgataataaaacttgttctgtttctcatgttttccttgagtccataaaaaatcgagtcctaaatgttttactttattcaatttac 5575115  T
Q  1086 ttg-aaggataatttt 1100  Q
    ||| ||||||||||||    
T  5575116 ttgaaaggataatttt 5575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 8 - 535
Target Start/End: Original strand, 5569038 - 5569566
Alignment:
Q  8 aatcctttgataggttgcactttgaaatgttcacatcctctaaatgcggaagtttcctcacagcttcgctgaatcctttatctgaaattttcgagcactc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5569038 aatcctttgataggttgcactttgaaatgttcacatcctctaaatgcggaagtttcctcacagcttcgctgaatcctttatctgaaattttcgagcactc 5569137  T
Q  108 taccagcttcatgcatcgagggttactagcactgtaaaattcgaattnnnnnnnnn-tgaaaattaattaaattcataaagatatttacattgcatacat 206  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||          |||||||||||||||||||||||||||||||||||||||||||    
T  5569138 taccagcttcatgcatcgaaggttactagcactgtaaaattcaaattcaaaaaaaaatgaaaattaattaaattcataaagatatttacattgcatacat 5569237  T
Q  207 atnnnnnnnnntgataaaaattacttctcggatatgtattgaaggagacgatcggtgccaataaactcaatatcaatgtctatcaaaaatccgcaacttc 306  Q
    ||         |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5569238 ataaaaaaaaatgataataattacttctcggatatgtattgaaggagacgatcggtgccaataaactcaatatcaatgtctatcaaaaatccgcaacttc 5569337  T
Q  307 gatcaacagcataacgacaaatcttcaccaaatctggaggaaagaagcgtgnnnnnnngcgacgattggtcatgttaatctgcatggtacgccacacacg 406  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| |    
T  5569338 gatcaacagcataatgacaaatcttcaccaaatctggaggaaagaagcgtgaaaaaaagcgacgattggtcatgttaatctgcatggtacgccacacaag 5569437  T
Q  407 aggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtct 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5569438 aggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaatagtatcaagcctttgaaggatgttcaccgtgatgtct 5569537  T
Q  507 cttggaagtgcaagccaatttggcatatt 535  Q
    |||||||||||||||||||||||||||||    
T  5569538 cttggaagtgcaagccaatttggcatatt 5569566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 86; Significance: 2e-40; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 584 - 823
Target Start/End: Complemental strand, 3102 - 2844
Alignment:
Q  584 tgatagagtatgctacatataacactagatctagggttgcaaggaaaataaacataaaagatgcaattcatt-cataacatgttcaagagagtct----- 677  Q
    ||||||| || |||||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||   ||||| |||||||||         
T  3102 tgatagaatacgctacagataacactagatctatggttgcaagaaaaataaacataaaagctgcaattcatttcatactctgttctagagagtctgttac 3003  T
Q  678 -----------aggttaaaacagtaatgggccatgggcctatcatttcaactactagacatataataaaaccaggattgagcactaaaggcaccccc-tc 765  Q
               |||| || ||||||||||||| | ||| ||| | ||||||||||||| ||||||||||| || | ||||||||||| || |||||| ||    
T  3002 aatatatagctaggtcaacacagtaatgggccctaggcttattaattcaactactagatatataataaaaacaaggttgagcactaagggtacccccctc 2903  T
Q  766 ttttact-agtaacggtagtaatcctttaaccaagctggtgctttgttttcccttagga 823  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2902 ttttacttagtaacggtagtaatcctttagccaagctggtgctttgttttcccttagga 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 583 - 823
Target Start/End: Complemental strand, 8609 - 8350
Alignment:
Q  583 ttgatagagtatgctacatataacactagatctagggttgcaaggaaaataaacataaaagatgcaattcatt-cataacatgttcaagagagtct---- 677  Q
    |||||||| || |||||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||   ||||| |||||||||        
T  8609 ttgatagaatacgctacagataacactagatctatggttgcaagaaaaataaacataaaagctgcaattcatttcatactctgttctagagagtctgtta 8510  T
Q  678 ------------aggttaaaacagtaatgggccatgggcctatcatttcaactactagacatataataaaaccaggattgagcactaaaggcaccccc-t 764  Q
                |||| || ||||||||||||| | ||| ||| | ||||||||||||| ||||||||||| || | ||||||||||| || |||||| |    
T  8509 caatatatagctaggtcaacacagtaatgggccctaggcttattaattcaactactagatatataataaaaacaaggttgagcactaagggtacccccct 8410  T
Q  765 cttttact-agtaacggtagtaatcctttaaccaagctggtgctttgttttcccttagga 823  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  8409 cttttacttagtaacggtagtaatcctttagccaagctggtgctttgtttttccttagga 8350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 5e-28; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 406 - 530
Target Start/End: Complemental strand, 30201240 - 30201116
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtc 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||| |||  |||||||||||| |||||  | || |||||    
T  30201240 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgtcacaatttcaatggtactaagcctttgaagaatgttttctgtaatgtc 30201141  T
Q  506 tcttggaagtgcaagccaatttggc 530  Q
    | | |||||| ||||||||||||||    
T  30201140 tttaggaagttcaagccaatttggc 30201116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 406 - 530
Target Start/End: Complemental strand, 30227415 - 30227291
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtc 505  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| || |  || || ||| ||||||||||||| |||||    ||||||||    
T  30227415 gaggatccttgcaaatgttccactatagaggacacacttgacatgcacttgtcacaatctcgatggtaccaagcctttgaagaatgtttgttgtgatgtc 30227316  T
Q  506 tcttggaagtgcaagccaatttggc 530  Q
    ||| |||||| ||||||||||||||    
T  30227315 tctaggaagttcaagccaatttggc 30227291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 390 - 531
Target Start/End: Complemental strand, 29856929 - 29856788
Alignment:
Q  390 atggtacgccacacacgaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaagga 489  Q
    |||||||||||||   ||||||| || || |||| ||||||||||||||| ||||||||||||||| | || |  |||||||||||||||||||||||||    
T  29856929 atggtacgccacaggagaggatctttacatatgtcccaccatagaggacaaacttgacatgcacttttcacgatttcaattgtatcaagcctttgaagga 29856830  T
Q  490 tgttcaccgtgatgtctcttggaagtgcaagccaatttggca 531  Q
    ||||  | ||||| |||||  ||||| |||||||||||||||    
T  29856829 tgtttgctgtgatttctctcagaagttcaagccaatttggca 29856788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 406 - 530
Target Start/End: Complemental strand, 30214786 - 30214663
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtc 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||| ||| |||| |||||||  |||||    ||||||||    
T  30214786 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgtcacaatctcaatggtaccaagtctttgaa-aatgtttgttgtgatgtc 30214688  T
Q  506 tcttggaagtgcaagccaatttggc 530  Q
    ||| |||||| ||||||||||||||    
T  30214687 tctaggaagttcaagccaatttggc 30214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 390 - 529
Target Start/End: Complemental strand, 29649117 - 29648978
Alignment:
Q  390 atggtacgccacacacgaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaagga 489  Q
    |||||||||||||   |||||||||| |||||||||||| |||||||||| ||| | |||||| ||||||| |  ||||  |||||||  | ||||||||    
T  29649117 atggtacgccacatgagaggatccttacaaatgttccacgatagaggacatactaggcatgcatttgttacaatttcaacagtatcaactccttgaagga 29649018  T
Q  490 tgttcaccgtgatgtctcttggaagtgcaagccaatttgg 529  Q
    |||| |  |||||||||||||||||| |||||||||||||    
T  29649017 tgttaattgtgatgtctcttggaagttcaagccaatttgg 29648978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 340
Target Start/End: Complemental strand, 30214886 - 30214843
Alignment:
Q  297 ccgcaacttcgatcaacagcataacgacaaatcttcaccaaatc 340  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  30214886 ccgcaacttcgttcaacagcataacgacaaatctttaccaaatc 30214843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 341
Target Start/End: Complemental strand, 30201337 - 30201296
Alignment:
Q  300 caacttcgatcaacagcataacgacaaatcttcaccaaatct 341  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  30201337 caacttcgatcaacagcataacgacaaatctttaccagatct 30201296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 406 - 454
Target Start/End: Complemental strand, 30239101 - 30239053
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcact 454  Q
    ||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  30239101 gaggatccttgcatatgttccaccatagaggacatactaggcatgcact 30239053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 406 - 443
Target Start/End: Original strand, 36309774 - 36309811
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacact 443  Q
    |||||||||||||||||||||||||| | |||||||||    
T  36309774 gaggatccttgcaaatgttccaccattgcggacacact 36309811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 406 - 443
Target Start/End: Original strand, 36333955 - 36333992
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacact 443  Q
    |||||||||||||||||||||||||| | |||||||||    
T  36333955 gaggatccttgcaaatgttccaccattgtggacacact 36333992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 8e-18; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 16966196 - 16966271
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcct 481  Q
    |||||||||||||||| |||||||||| |||||||||||||||| ||||||| ||||  ||||| |||||||||||    
T  16966196 gaggatccttgcaaatattccaccataaaggacacacttgacatacacttgtgactatttcaatagtatcaagcct 16966271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 16955678 - 16955753
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcct 481  Q
    |||||||||||||||| |||||||||| ||| |||||||||||| ||||||| || |  ||||| |||||||||||    
T  16955678 gaggatccttgcaaatattccaccataaagggcacacttgacatacacttgtgacaatttcaatagtatcaagcct 16955753  T

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Target: chr5 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 390 - 529
Target Start/End: Complemental strand, 11635047 - 11634908
Alignment:
Q  390 atggtacgccacacacgaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaagga 489  Q
    |||||||||||||   ||||||||||||| ||| |||||||||||||||| |||  ||||||| || ||||||  ||||| |||||||||||  |||| |    
T  11635047 atggtacgccacatgagaggatccttgcatatgctccaccatagaggacatactatacatgcattttttactatgtcaatggtatcaagcctccgaagaa 11634948  T
Q  490 tgttcaccgtgatgtctcttggaagtgcaagccaatttgg 529  Q
    ||||     |||||||| | |||||| |||||||||||||    
T  11634947 tgtttgttatgatgtctgtcggaagttcaagccaatttgg 11634908  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 407 - 459
Target Start/End: Original strand, 16053597 - 16053649
Alignment:
Q  407 aggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgtta 459  Q
    |||||||||||||||||||||||| ||||| ||||||   |||||||||||||    
T  16053597 aggatccttgcaaatgttccaccaaagagggcacactccgcatgcacttgtta 16053649  T

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Target: chr8 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 390 - 494
Target Start/End: Original strand, 1152921 - 1153025
Alignment:
Q  390 atggtacgccacacacgaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaagga 489  Q
    |||||||||||||   |||||||||||||||||| |||||| |||||||| || | || |||||||||||| |  ||||  ||||| || ||||||||||    
T  1152921 atggtacgccacattagaggatccttgcaaatgtgccaccacagaggacaaacattacgtgcacttgttacaatttcaacagtatccagtctttgaagga 1153020  T
Q  490 tgttc 494  Q
    |||||    
T  1153021 tgttc 1153025  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 406 - 530
Target Start/End: Original strand, 14934515 - 14934639
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtc 505  Q
    ||||||||||| |||| |||||||| ||||| ||||||||||||||||| |  | ||  ||||| | | |||||||||| || |||||  | || |  ||    
T  14934515 gaggatccttgaaaatattccaccaaagagggcacacttgacatgcactagccaatatttcaatggcaccaagcctttggagaatgtttgcagtcacatc 14934614  T
Q  506 tcttggaagtgcaagccaatttggc 530  Q
    |||||||||| ||||||||||||||    
T  14934615 tcttggaagttcaagccaatttggc 14934639  T

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Target: chr7 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 406 - 530
Target Start/End: Original strand, 16644754 - 16644878
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtc 505  Q
    |||| ||||||||||||||||||||||||| ||||||| |  |||||||||| || |  |||| || || |||||||||||| |||||    ||||| ||    
T  16644754 gaggttccttgcaaatgttccaccatagagcacacactagggatgcacttgtcacaatttcaactgcattaagcctttgaagaatgttttgtgtgatatc 16644853  T
Q  506 tcttggaagtgcaagccaatttggc 530  Q
    ||| |||||  ||||||||||||||    
T  16644854 tctaggaaggtcaagccaatttggc 16644878  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 406 - 530
Target Start/End: Original strand, 17619115 - 17619239
Alignment:
Q  406 gaggatccttgcaaatgttccaccatagaggacacacttgacatgcacttgttactacatcaattgtatcaagcctttgaaggatgttcaccgtgatgtc 505  Q
    |||| ||||||||||||||||||||||||| ||||||| |  |||||||||| || |  |||| || || |||||||||||| |||||    ||||| ||    
T  17619115 gaggttccttgcaaatgttccaccatagagcacacactagggatgcacttgtcacaatttcaactgcattaagcctttgaagaatgttttgtgtgatatc 17619214  T
Q  506 tcttggaagtgcaagccaatttggc 530  Q
    ||| |||||  ||||||||||||||    
T  17619215 tctaggaaggtcaagccaatttggc 17619239  T

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