View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5026-Insertion-9 (Length: 400)
Name: NF5026-Insertion-9
Description: NF5026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5026-Insertion-9 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 29 - 400
Target Start/End: Complemental strand, 8356207 - 8355836
Alignment:
| Q |
29 |
tgattgtacgggtcctccagccttgttcactagtatactgttttcttctatgttgggggttgagaacttatatagggtgatgatgataaatttgagatta |
128 |
Q |
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| T |
8356207 |
tgattgtacggttcctccagccttgttcactagtatactgttttcttctatgttgggggttgagaacttatatagggtgatgatgataaatttgagatta |
8356108 |
T |
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| Q |
129 |
aacaaggtaacattttttccactgttgaacatctgaatgcactttgtgtattgttaatgtgtaaagaaaaatatattattcttgcctcattttaattatc |
228 |
Q |
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| T |
8356107 |
aacaaggtcacattttttccactgttgaacatctgaatgcactttgtgtattgttaatgtgtaaagaaaaatatattattcttgcctcattttaattatc |
8356008 |
T |
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| Q |
229 |
attgctgaattagtttagcatcaaccagaactaaattgtcttctgattttctgtgcaacttttgataaatggattatattatttttatagaatttataag |
328 |
Q |
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| T |
8356007 |
attgctgaattagtttagcatcaaccagaactaaattgtcttctgattttctgtgcaacttttgataaatggattatattatttttgtagaatttataag |
8355908 |
T |
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| Q |
329 |
atggtagatcaactaaacttaaatagatcacttctccacatcagcatttcccgcttgcctgcctacatggga |
400 |
Q |
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| T |
8355907 |
atggtagatcaactaaactgaaatagatcacttctccacatcagcatttcccgcttgcctgcctacatggga |
8355836 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 8433207 - 8433167
Alignment:
| Q |
17 |
tagctgttgagctgattgtacgggtcctccagccttgttca |
57 |
Q |
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| T |
8433207 |
tagctgttgagttgattgtaagggtcctccagctttgttca |
8433167 |
T |
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