View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5027-Insertion-7 (Length: 306)
Name: NF5027-Insertion-7
Description: NF5027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5027-Insertion-7 |
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Alignment Details
Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 17322378 - 17322574
Alignment:
| Q |
22 |
gatgacgagaattgttcttctctcttttgagtttgctttgttctccttaaaaatgtttaatgtgaattaactgacgtaagcataaaagtaaagggggacg |
121 |
Q |
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| T |
17322378 |
gatgacgagaattgttcttctctcttttgattttgctt-gttctccttaaaaatatttaagatgagttagttgatgtaagcacaaaagtaaggcaggacg |
17322476 |
T |
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| Q |
122 |
agcaaaatcaaacgggagaagatcaattctccacgaagacaccacttagaatttcaaagcaaaggttaactttgtttttgactcataacaaaagttaa |
219 |
Q |
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| T |
17322477 |
agtaaaatcaaacgggagaagatcaattctccacgaagacaccacttagaatttcaaagcaaaggttaattttgttttcgactcataacaaaagttaa |
17322574 |
T |
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