View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5028-Insertion-6 (Length: 468)

Name: NF5028-Insertion-6
Description: NF5028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5028-Insertion-6
NF5028-Insertion-6
[»] chr5 (8 HSPs)
chr5 (164-468)||(37368488-37368789)
chr5 (274-467)||(41528892-41529083)
chr5 (36-81)||(41528445-41528490)
chr5 (40-81)||(37368926-37368967)
chr5 (36-81)||(41528511-41528556)
chr5 (36-81)||(41528577-41528622)
chr5 (36-81)||(41528643-41528688)
chr5 (36-77)||(37368998-37369039)
[»] chr6 (36 HSPs)
chr6 (198-468)||(33295747-33296018)
chr6 (200-467)||(5249580-5249849)
chr6 (202-467)||(8520021-8520288)
chr6 (274-467)||(29934164-29934355)
chr6 (274-467)||(34255070-34255261)
chr6 (294-467)||(26619994-26620166)
chr6 (294-467)||(26725907-26726079)
chr6 (294-442)||(5130569-5130715)
chr6 (347-467)||(28223030-28223150)
chr6 (36-81)||(5250016-5250061)
chr6 (36-81)||(28145150-28145195)
chr6 (36-81)||(29934624-29934669)
chr6 (36-81)||(6406599-6406644)
chr6 (40-81)||(26620388-26620429)
chr6 (36-81)||(26620455-26620500)
chr6 (36-81)||(26726301-26726346)
chr6 (40-81)||(26726367-26726408)
chr6 (36-81)||(26726434-26726479)
chr6 (36-81)||(28145217-28145262)
chr6 (36-81)||(28145284-28145329)
chr6 (202-341)||(28145379-28145519)
chr6 (36-81)||(34255467-34255512)
chr6 (36-81)||(34255599-34255644)
chr6 (38-81)||(34255533-34255576)
chr6 (36-81)||(5249949-5249994)
chr6 (36-81)||(28145083-28145128)
chr6 (36-81)||(29934558-29934603)
chr6 (36-81)||(31113159-31113204)
chr6 (36-81)||(34255665-34255710)
chr6 (42-81)||(33296088-33296127)
chr6 (36-81)||(26620324-26620367)
chr6 (36-81)||(26726237-26726280)
chr6 (44-81)||(5250085-5250122)
chr6 (36-81)||(31113227-31113272)
chr6 (36-76)||(6406530-6406570)
chr6 (287-332)||(28222813-28222858)
[»] scaffold0046 (4 HSPs)
scaffold0046 (164-428)||(90769-91034)
scaffold0046 (36-81)||(90482-90527)
scaffold0046 (36-81)||(90549-90594)
scaffold0046 (36-81)||(90618-90662)
[»] chr4 (40 HSPs)
chr4 (166-467)||(14190689-14191001)
chr4 (202-467)||(1506360-1506625)
chr4 (302-467)||(4852920-4853083)
chr4 (271-406)||(5577944-5578078)
chr4 (361-467)||(2894164-2894271)
chr4 (271-403)||(13713559-13713689)
chr4 (36-81)||(4852640-4852685)
chr4 (36-81)||(5909063-5909108)
chr4 (36-81)||(13713176-13713221)
chr4 (36-81)||(13713309-13713354)
chr4 (36-81)||(14190488-14190533)
chr4 (36-81)||(31663317-31663362)
chr4 (36-81)||(1505980-1506025)
chr4 (36-81)||(1506047-1506092)
chr4 (36-81)||(1506113-1506158)
chr4 (36-81)||(1506180-1506225)
chr4 (36-81)||(1506246-1506291)
chr4 (36-81)||(4852571-4852616)
chr4 (36-81)||(5599786-5599831)
chr4 (36-81)||(5599852-5599897)
chr4 (36-81)||(5599918-5599963)
chr4 (36-81)||(14190554-14190599)
chr4 (36-81)||(31663385-31663430)
chr4 (36-81)||(31663586-31663631)
chr4 (43-81)||(5578261-5578299)
chr4 (36-82)||(5578326-5578372)
chr4 (36-81)||(5578457-5578502)
chr4 (36-81)||(5599984-5600029)
chr4 (36-81)||(5909129-5909174)
chr4 (36-81)||(13702616-13702661)
chr4 (36-81)||(13713109-13713154)
chr4 (36-81)||(13713243-13713288)
chr4 (46-81)||(31663452-31663487)
chr4 (38-81)||(31663519-31663562)
chr4 (43-81)||(4852717-4852755)
chr4 (36-81)||(6735389-6735434)
chr4 (36-81)||(13713376-13713421)
chr4 (274-322)||(5600236-5600284)
chr4 (44-81)||(31663248-31663285)
chr4 (36-72)||(6735330-6735366)
[»] chr8 (24 HSPs)
chr8 (271-467)||(20809991-20810186)
chr8 (274-467)||(5558272-5558461)
chr8 (36-81)||(25336476-25336521)
chr8 (36-81)||(3166007-3166052)
chr8 (36-81)||(5557758-5557803)
chr8 (36-81)||(5557824-5557869)
chr8 (36-81)||(5557890-5557935)
chr8 (36-81)||(20810410-20810455)
chr8 (36-81)||(25336671-25336716)
chr8 (36-80)||(3166075-3166119)
chr8 (37-81)||(26082037-26082081)
chr8 (36-81)||(3165807-3165852)
chr8 (36-81)||(3165874-3165919)
chr8 (36-81)||(5557692-5557737)
chr8 (36-81)||(20810343-20810388)
chr8 (44-81)||(25336612-25336649)
chr8 (36-81)||(26082104-26082149)
chr8 (36-81)||(5557956-5558002)
chr8 (43-77)||(21542084-21542118)
chr8 (36-81)||(5558023-5558068)
chr8 (43-81)||(4844049-4844087)
chr8 (51-81)||(25336552-25336582)
chr8 (36-81)||(3165941-3165985)
chr8 (44-81)||(21542147-21542184)
[»] chr7 (37 HSPs)
chr7 (271-467)||(4341594-4341789)
chr7 (274-467)||(42785517-42785708)
chr7 (346-467)||(19803496-19803617)
chr7 (36-81)||(4341217-4341262)
chr7 (36-81)||(4341416-4341461)
chr7 (383-467)||(21958107-21958192)
chr7 (36-81)||(34456338-34456383)
chr7 (36-81)||(34456404-34456449)
chr7 (271-341)||(21958254-21958324)
chr7 (36-81)||(3078580-3078625)
chr7 (36-81)||(4341283-4341328)
chr7 (36-81)||(4341350-4341395)
chr7 (36-81)||(21958495-21958540)
chr7 (36-81)||(42785912-42785957)
chr7 (40-81)||(42785978-42786019)
chr7 (36-81)||(48477949-48477994)
chr7 (36-81)||(48478211-48478256)
chr7 (36-81)||(48478277-48478322)
chr7 (36-81)||(3078729-3078774)
chr7 (36-81)||(3081127-3081172)
chr7 (36-81)||(21958562-21958607)
chr7 (36-81)||(34456471-34456516)
chr7 (36-81)||(48478015-48478060)
chr7 (36-81)||(48478081-48478126)
chr7 (36-81)||(48478343-48478388)
chr7 (37-81)||(33615961-33616005)
chr7 (36-75)||(15695391-15695430)
chr7 (36-75)||(15702371-15702410)
chr7 (43-81)||(3078660-3078698)
chr7 (36-81)||(3078513-3078558)
chr7 (36-81)||(3081196-3081241)
chr7 (36-81)||(3081334-3081378)
chr7 (40-81)||(15695452-15695493)
chr7 (40-81)||(15702432-15702473)
chr7 (36-81)||(21958428-21958473)
chr7 (274-322)||(48478595-48478643)
chr7 (36-81)||(3081400-3081445)
[»] chr1 (21 HSPs)
chr1 (237-467)||(51844625-51844858)
chr1 (302-467)||(14114364-14114527)
chr1 (36-81)||(22208035-22208080)
chr1 (36-81)||(22208102-22208147)
chr1 (36-81)||(22207696-22207741)
chr1 (36-81)||(22207832-22207877)
chr1 (36-81)||(22207901-22207946)
chr1 (36-81)||(22207968-22208013)
chr1 (36-81)||(51844419-51844464)
chr1 (43-81)||(22207772-22207810)
chr1 (36-81)||(14114764-14114809)
chr1 (36-81)||(14114904-14114949)
chr1 (36-81)||(15088571-15088616)
chr1 (36-81)||(15088638-15088683)
chr1 (36-81)||(22207629-22207674)
chr1 (36-81)||(22211179-22211224)
chr1 (36-81)||(22211246-22211291)
chr1 (36-81)||(51844352-51844397)
chr1 (36-81)||(14114695-14114740)
chr1 (36-81)||(14114833-14114878)
chr1 (36-70)||(51844486-51844520)
[»] chr2 (14 HSPs)
chr2 (274-467)||(2742936-2743127)
chr2 (36-81)||(2743523-2743568)
chr2 (36-81)||(31314986-31315031)
chr2 (37-81)||(31347092-31347136)
chr2 (36-81)||(2743325-2743370)
chr2 (36-81)||(2743391-2743436)
chr2 (36-81)||(2743457-2743502)
chr2 (36-81)||(31315053-31315098)
chr2 (36-81)||(31315123-31315168)
chr2 (36-81)||(31315191-31315236)
chr2 (36-81)||(31346839-31346884)
chr2 (36-81)||(11951283-11951328)
chr2 (36-81)||(31346958-31347003)
chr2 (36-81)||(31347025-31347070)
[»] scaffold0158 (1 HSPs)
scaffold0158 (274-467)||(26323-26514)
[»] scaffold0038 (2 HSPs)
scaffold0038 (347-467)||(23528-23648)
scaffold0038 (287-332)||(23311-23356)
[»] chr3 (31 HSPs)
chr3 (346-467)||(14530205-14530326)
chr3 (36-81)||(5938926-5938971)
chr3 (36-81)||(18111445-18111490)
chr3 (36-81)||(18111579-18111624)
chr3 (36-81)||(28034797-28034842)
chr3 (39-81)||(19441127-19441169)
chr3 (36-81)||(5835623-5835668)
chr3 (36-81)||(5938859-5938904)
chr3 (36-81)||(5938993-5939038)
chr3 (36-81)||(14521046-14521091)
chr3 (36-81)||(14521112-14521157)
chr3 (36-81)||(18111512-18111557)
chr3 (36-81)||(28034664-28034709)
chr3 (36-81)||(29897061-29897106)
chr3 (36-81)||(29897116-29897161)
chr3 (36-74)||(19384337-19384375)
chr3 (36-81)||(2746789-2746834)
chr3 (36-81)||(5938725-5938770)
chr3 (36-81)||(5938792-5938837)
chr3 (36-81)||(19384094-19384139)
chr3 (36-81)||(19384208-19384253)
chr3 (36-81)||(19479993-19480038)
chr3 (44-81)||(28034739-28034776)
chr3 (43-81)||(45227301-45227339)
chr3 (36-81)||(19441057-19441102)
chr3 (42-81)||(19384148-19384187)
chr3 (43-77)||(19480064-19480098)
chr3 (43-81)||(45227234-45227272)
chr3 (48-81)||(19384282-19384315)
chr3 (44-81)||(19480127-19480164)
chr3 (36-81)||(29897171-29897216)
[»] scaffold0927 (3 HSPs)
scaffold0927 (36-81)||(3631-3676)
scaffold0927 (36-75)||(3698-3737)
scaffold0927 (36-76)||(3564-3604)
[»] scaffold0060 (2 HSPs)
scaffold0060 (36-81)||(40003-40048)
scaffold0060 (36-81)||(39936-39981)
[»] scaffold0043 (3 HSPs)
scaffold0043 (36-81)||(69705-69750)
scaffold0043 (44-81)||(69772-69809)
scaffold0043 (36-81)||(69839-69884)


Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 164 - 468
Target Start/End: Complemental strand, 37368789 - 37368488
Alignment:
Q  164 agtttctataattcactgtgagcatatgactccggttgcatttcaacttttctttcaa-tcatttctataagtatatatacatcaattgcgttgggattt 262  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||    
T  37368789 agtttctataattcactgtgagcatattactcaggttgcatttcaacttttctttcaaatcatttctataagtatatatacatcaattgcgttgctaatt 37368690  T
Q  263 gccctccg-catttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaa 361  Q
     ||||||  |||||||||||||||||||| |||||||||||| |  |||||||||| |||||||| |||||||||||||||||| | |||||||||||||    
T  37368689 tccctccaacatttatactaacatcaacatacttattaacatga--gagattttagaataaacaagtaagggtgcctaatcaag-atataatcattctaa 37368593  T
Q  362 ctatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcataaaatggtctatttattcatg 461  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  37368592 ctatcttat--ttattctacttcaaatgtaccattcatatggcataacagacacgtttgcacaaaaggcaagtaatcataaaatggtctaattattcatg 37368495  T
Q  462 ttatctt 468  Q
    |||||||    
T  37368494 ttatctt 37368488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 274 - 467
Target Start/End: Original strand, 41528892 - 41529083
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatt 373  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| |||| | |||||  ||  ||| |  || |||||||||||||| |||||| ||||     
T  41528892 ttatgctaacataaacatacttattaacataaaagagattttagaataa-ctaataattgtatctagttcag-aaataatcattcta-ctatctcatatc 41528988  T
Q  374 tattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||  |||||||||| |||||||||| ||||  || |||| ||||||||||| |||| |||||| ||||||| ||| |||||||||||||||    
T  41528989 tattctgtttcaaatgtatcattcatatgacatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggcctaattattcatgttatct 41529083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 41528445 - 41528490
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  41528445 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 41528490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 37368967 - 37368926
Alignment:
Q  40 agccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37368967 agccgtacctcataggctacattatctcttcgttgtagcaaa 37368926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 41528511 - 41528556
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  41528511 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 41528556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 41528577 - 41528622
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  41528577 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 41528622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 41528643 - 41528688
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  41528643 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 41528688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 37369039 - 37368998
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtag 77  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  37369039 tatgagtcgtacctcataggctacattatctctttgttgtag 37368998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 198 - 468
Target Start/End: Complemental strand, 33296018 - 33295747
Alignment:
Q  198 gttgcatttcaacttttctttcaa-tcatttctataagtatatatacatcaattgcgttgggatttgccctccg-catttatactaacatcaacagactt 295  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |  | || ||||||| |||||||||||||||||||| ||||    
T  33296018 gttgcatttcaacttttctttcaaatcatttctataagtatatatacatcaattgtgtggctaatttccctccgacatttatactaacatcaacatactt 33295919  T
Q  296 attaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtaccat 395  Q
    |||||||||||| ||||||||| ||||||||  ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33295918 attaacataaaatagattttagaataaacaagcaagggtgcctaatgaag-aaataatcatcctaactatcttatatttattctacttcaaatgtaccat 33295820  T
Q  396 tcatatggcataacagacatggttgcacaaaaggcaagtaatcataaaatggtctatttattcatgttatctt 468  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  33295819 tcatatggcataacagacatgtttgtacaaaaggcaagtaatcataaaatggtctaattattcatgttatctt 33295747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 200 - 467
Target Start/End: Complemental strand, 5249849 - 5249580
Alignment:
Q  200 tgcatttcaacttttctttca-atcatttctataagtatatatacatcaattgcgttgggatttgccctccg-catttatactaacatcaacagacttat 297  Q
    |||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||  | || ||||||  |||||||||||||||||||| ||||||    
T  5249849 tgcatttcaaattttcttttatatcatttctataagtatatatacatcaattgcgttgctaatttccctccaacatttatactaacatcaacatacttat 5249750  T
Q  298 taacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtaccattc 397  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||||||  ||||||||||||||||    
T  5249749 taacataaaagagattttagaataaacaagtaagggtgcctaatcaag-aaataatcactctaactatcttgtatttattctgtttcaaatgtaccattc 5249651  T
Q  398 atatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||||||| || |||| ||||| ||||| ||||||||||| ||||||||||| ||||| |||||||||    
T  5249650 atatggcataatagtcatgcttgcataaaagacaagtaatcataaaaatggtctaattattgatgttatct 5249580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 202 - 467
Target Start/End: Original strand, 8520021 - 8520288
Alignment:
Q  202 catttcaacttttctttcaa-tcatttctataagtatatatacatcaattgcgttgggatttgccctccg-catttatactaacatcaacagacttatta 299  Q
    ||||| || ||||||||||| |||||| |||  ||||||||||||||||||  |||  | || ||||||  ||||||||||||| | |||| ||||||||    
T  8520021 catttaaaattttctttcaaatcatttttatcggtatatatacatcaattgtcttgctaatttccctccaacatttatactaacgtaaacatacttatta 8520120  T
Q  300 acataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtaccattcat 399  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8520121 acataaaagagattgtagaataaacaagtaagggtgcctaatcaag-aaataatcattctaactatcttatatttattctacttcaaatgtaccattcat 8520219  T
Q  400 atggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||||| || |||| ||||||||||| |||  |||||| ||||||||||| ||||| |||||||||    
T  8520220 atggcataatagtcatgcttgcacaaaagtcaaaaaatcataaaaatggtctaattatttatgttatct 8520288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 274 - 467
Target Start/End: Complemental strand, 29934355 - 29934164
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatt 373  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| |||| | |||||  || |||| |  || |||||||||||||| |||||| ||||     
T  29934355 ttatgctaacataaacatacttattaacataaaagagattttagaataa-ctaataattgtacctagttcag-aaataatcattcta-ctatctcatatc 29934259  T
Q  374 tattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||  |||||||||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||||||||| |||||||||||||||    
T  29934258 tattctgtttcaaatgtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggtctaattattcatgttatct 29934164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 467
Target Start/End: Complemental strand, 34255261 - 34255070
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatt 373  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| ||||| || |||  || |||| |  || |||||||||||||| |||||| ||||     
T  34255261 ttatgctaacataaacatacttattaacataaaagagattttagaataaataa-taattgtacctagttcag-aaataatcattcta-ctatctcatatc 34255165  T
Q  374 tattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||  |||||||||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||||| ||| |||||||||||||||    
T  34255164 tattctgtttcaaatgtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggcctaattattcatgttatct 34255070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 467
Target Start/End: Complemental strand, 26620166 - 26619994
Alignment:
Q  294 ttattaacataaaagagattttaggataaacaaataagggtgcctaat-caaggaaataatcattctaactatcttatatttattctacttcaaatgtac 392  Q
    ||||||||||||| |||||||||| ||||| |||||||  | |||||| |||  |||||||||||||| | |||| |||| ||||||  |||||||||||    
T  26620166 ttattaacataaatgagattttagaataaaaaaataagaatacctaattcaa--aaataatcattcta-caatctcatatctattctgtttcaaatgtac 26620070  T
Q  393 cattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||||||| || | || |||| ||||||||  ||||||||||||| ||||||||||| |||||||||||||||    
T  26620069 cattcatatggtatgatagtcatgcttgcacaatcggcaagtaatcataaaaatggtctaattattcatgttatct 26619994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 467
Target Start/End: Complemental strand, 26726079 - 26725907
Alignment:
Q  294 ttattaacataaaagagattttaggataaacaaataagggtgcctaat-caaggaaataatcattctaactatcttatatttattctacttcaaatgtac 392  Q
    ||||||||||||| |||||||||| ||||| |||||||  | |||||| |||  |||||||||||||| | |||| |||| ||||||  |||||||||||    
T  26726079 ttattaacataaatgagattttagaataaaaaaataagaatacctaattcaa--aaataatcattcta-caatctcatatctattctgtttcaaatgtac 26725983  T
Q  393 cattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||||||| || | || |||| ||||||||  ||||||||||||| ||||||||||| |||||||||||||||    
T  26725982 cattcatatggtatgatagtcatgcttgcacaatcggcaagtaatcataaaaatggtctaattattcatgttatct 26725907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 442
Target Start/End: Complemental strand, 5130715 - 5130569
Alignment:
Q  294 ttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtacc 393  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||||  || |||||||||||||| |||||| ||||  |||||  ||||||||||||    
T  5130715 ttattaacataaatgagattttagaataaacaaataaggatacctaattcag-aaataatcattcta-ctatctcatatcaattctgtttcaaatgtacc 5130618  T
Q  394 attcatatggcataacagacatggttgcacaaaaggcaagtaatcataa 442  Q
    |||||||||| || | || |||| ||||||||  |||||||||||||||    
T  5130617 attcatatggtatgatagtcatgcttgcacaatcggcaagtaatcataa 5130569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 28223030 - 28223150
Alignment:
Q  347 aaataatcattctaactatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaat 445  Q
    |||||||||||||| |||||| |||||||||||  ||||||| ||||||||||||| ||| | ||  ||| ||||||||  ||||||||||||| |||||    
T  28223030 aaataatcattcta-ctatctcatatttattctgtttcaaatataccattcatatgacatgatagttatgcttgcacaattggcaagtaatcataaaaat 28223128  T
Q  446 ggtctatttattcatgttatct 467  Q
    |||||| |||||||||||||||    
T  28223129 ggtctaattattcatgttatct 28223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 5250061 - 5250016
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5250061 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 5250016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 28145150 - 28145195
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28145150 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 28145195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 29934669 - 29934624
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29934669 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 29934624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 6406599 - 6406644
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  6406599 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 6406644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 26620429 - 26620388
Alignment:
Q  40 agccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26620429 agccgtacctcataggctacattatctcttcgttgtagcaaa 26620388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 26620500 - 26620455
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  26620500 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 26620455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 26726346 - 26726301
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  26726346 tatgagccgtacctcataagctacattatctcttcgttgtagcaaa 26726301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 26726408 - 26726367
Alignment:
Q  40 agccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26726408 agccgtacctcataggctacattatctcttcgttgtagcaaa 26726367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 26726479 - 26726434
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  26726479 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 26726434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 28145217 - 28145262
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  28145217 tatgagccgtacatcataggctacattatctcttcgttgtagcaaa 28145262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 28145284 - 28145329
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  28145284 tatgagccgtacctcatagactacattatctcttcgttgtagcaaa 28145329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 341
Target Start/End: Original strand, 28145379 - 28145519
Alignment:
Q  202 catttcaacttttctttcaa-tcatttctataagtatatatacatcaattgcgttgg--gatttgccctccg-catttatactaacatcaacagacttat 297  Q
    |||||||| ||||||||||| ||||| |||||| ||||||  ||||||||||||||   || || ||||||  ||||||||||| ||| |||| ||||||    
T  28145379 catttcaa-ttttctttcaaatcattactataattatata--catcaattgcgttgatagaatttccctccaacatttatactagcataaacatacttat 28145475  T
Q  298 taacataaaagagattttaggataaacaaataagggtgcctaat 341  Q
    |||||| || |||||||||| |||||||||||||| | ||||||    
T  28145476 taacatgaatgagattttagaataaacaaataaggatacctaat 28145519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34255512 - 34255467
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  34255512 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 34255467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34255644 - 34255599
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  34255644 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 34255599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 34255576 - 34255533
Alignment:
Q  38 tgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  34255576 tgagccgttcctcataggctacattatctcttcgttgtagcaaa 34255533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 5249994 - 5249949
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  5249994 tatgagccgtacctcatacactacattatctcttcgttgtagcaaa 5249949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 28145083 - 28145128
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  28145083 tatgagctgtacctcataggctacattatctctttgttgtagcaaa 28145128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 29934603 - 29934558
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  29934603 tatgagcggttcctcataggctacattatctcttcgttgtagcaaa 29934558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31113204 - 31113159
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  31113204 tatgagctatacctcataggctacattatctcttcgttgtagcaaa 31113159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34255710 - 34255665
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||    
T  34255710 tatgagtcgttcctcataggctacattatctcttcgttgtagcaaa 34255665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 33296127 - 33296088
Alignment:
Q  42 ccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  33296127 ccgtatctcataggctacattatctcttcgttgtagcaaa 33296088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 26620367 - 26620324
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  26620367 tatgagccgtacctca--ggctacattatctcttcgttgtagcaaa 26620324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 26726280 - 26726237
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  26726280 tatgagccgtacctca--ggctacattatctcttcgttgtagcaaa 26726237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 5250122 - 5250085
Alignment:
Q  44 gtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  5250122 gtacctcataggctacattatttcttcgttgtagcaaa 5250085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31113272 - 31113227
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||    
T  31113272 tatgagtcatacctcataagctacattatctcttcgttgtagcaaa 31113227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 6406530 - 6406570
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgta 76  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  6406530 tatgagccgtacctcataggctacattatttcttcattgta 6406570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 28222813 - 28222858
Alignment:
Q  287 aacagacttattaacataaaagagattttaggataaacaaataagg 332  Q
    |||| ||||||||||||||| |||||| ||| ||||||||||||||    
T  28222813 aacatacttattaacataaatgagattatagaataaacaaataagg 28222858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 151; Significance: 1e-79; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 164 - 428
Target Start/End: Original strand, 90769 - 91034
Alignment:
Q  164 agtttctataattcactgtgagcatatgactccggttgcatttcaacttttctttca-atcatttctataagtatatatacatcaattgcgttgggattt 262  Q
    ||||||||||||||||||||||||||| |||| |  |||||||||| |||||||||| |||||||||||| ||||||||| |||||||||||||  | ||    
T  90769 agtttctataattcactgtgagcatattactcagactgcatttcaaattttctttcatatcatttctataggtatatatagatcaattgcgttgctaatt 90868  T
Q  263 gccctccg-catttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaa 361  Q
     ||||||  |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  90869 tccctccaacatttatactaacatcaacatacttattaacataaaagagattttagaataaacaagtaagggtgcctaatcaa-gaaataatcattctaa 90967  T
Q  362 ctatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaag 428  Q
    ||||||| || |||||||  ||||||||||||||||||||||||||| ||  ||| |||||||||||    
T  90968 ctatcttgtacttattctgtttcaaatgtaccattcatatggcataataggaatgcttgcacaaaag 91034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 90482 - 90527
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  90482 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 90527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 90549 - 90594
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||    
T  90549 tatgagccgtacctcataggcaaaattatctcttcgttgtagcaaa 90594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 90618 - 90662
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||    
T  90618 tatgagccgtac-tcataggctacattatctattcgttgtagcaaa 90662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 166 - 467
Target Start/End: Original strand, 14190689 - 14191001
Alignment:
Q  166 tttctataattcactgtgagcatatgactcc--ggttgcatttcaacttttctttcaa-tcatttctataagtatatatacat--caattgcgttgggat 260  Q
    ||||||||||||||||||||||||| ||||   || |||||||||| ||||||||||| |||||||||| |||||||||||||  |||||||||||  |     
T  14190689 tttctataattcactgtgagcatattactcataggctgcatttcaaattttctttcaaatcatttctattagtatatatacatatcaattgcgttgttaa 14190788  T
Q  261 ttgccctccg-catttatactaacatca---ac--agacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatc 354  Q
    || ||||||  |||||| || ||||| |   ||  | ||||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||||    
T  14190789 tttccctccaacatttaaacgaacataacatacttatacttattaacataaaagggattttagaataaacaagtaagggtgcctaatcaag-aaataatc 14190887  T
Q  355 attctaactatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatt 453  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||| ||||||||||| |    
T  14190888 attctaactatcttatatttattctacttcaaatgtaccattcatatggcataatagtcatgcttgcacaaaaggcgagtaatcataaaaatggtctaat 14190987  T
Q  454 tattcatgttatct 467  Q
    ||||||||||||||    
T  14190988 tattcatgttatct 14191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 467
Target Start/End: Original strand, 1506360 - 1506625
Alignment:
Q  202 catttcaacttttctttcaa-tcatttctataagtatatatacatcaattgcgttgg--gatttgccctccg-catttatactaacatcaacagacttat 297  Q
    |||||||| ||||||||||| ||||| |||||| ||||||  ||||||||||||||   || || ||||||  ||||||||||| ||| |||| | ||||    
T  1506360 catttcaa-ttttctttcaaatcattactataattatata--catcaattgcgttgatagaattcccctccaacatttatactagcataaacatatttat 1506456  T
Q  298 taacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtaccattc 397  Q
    ||| ||||| |||||||||| |||||||||||||| | ||||||  || |||||||||||||| | |||| |||| ||||||  ||||||||||||||||    
T  1506457 taatataaatgagattttagaataaacaaataaggatacctaattcag-aaataatcattctacc-atctcatatctattctgtttcaaatgtaccattc 1506554  T
Q  398 atatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    |||||| || | || |||| ||||||||  ||||||||||||| ||||||||||| |||||||||||||||    
T  1506555 atatggtatgatagtcatgcttgcacaatcggcaagtaatcataaaaatggtctaattattcatgttatct 1506625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 467
Target Start/End: Original strand, 4852920 - 4853083
Alignment:
Q  302 ataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtaccattcatat 401  Q
    ||||| |||||||||| |||||||||||||| | ||||||  | |||||||||||||| ||||||| ||||| |||||  |||||||||||||||||| |    
T  4852920 ataaatgagattttagaataaacaaataaggatacctaattca-gaaataatcattct-actatctcatattaattctgtttcaaatgtaccattcat-t 4853016  T
Q  402 ggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||| | || |||| ||||||||  ||||||||||||| ||||||||||| |||||||||||||||    
T  4853017 ggcatgatagtcatgcttgcacaatcggcaagtaatcataaaaatggtctaattattcatgttatct 4853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 271 - 406
Target Start/End: Complemental strand, 5578078 - 5577944
Alignment:
Q  271 catttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttat 370  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||||| |||||||||||| | | ||||||  |  ||||||| ||||| ||||||| ||    
T  5578078 catttatactagcataaacatacttattaacataaatgagattttagaataaacaaataaagattcctaattcaaaaaataattattct-actatctcat 5577980  T
Q  371 atttattctacttcaaatgtaccattcatatggcat 406  Q
    ||||||| |  |||| ||||||||||||||||||||    
T  5577979 atttattttgtttcacatgtaccattcatatggcat 5577944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 361 - 467
Target Start/End: Complemental strand, 2894271 - 2894164
Alignment:
Q  361 actatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattca 459  Q
    ||||||| |||| ||||||  |||||||||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||||||||| |||||||    
T  2894271 actatctcatatctattctgtttcaaatgtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggtctaattattca 2894172  T
Q  460 tgttatct 467  Q
    ||||||||    
T  2894171 tgttatct 2894164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 271 - 403
Target Start/End: Original strand, 13713559 - 13713689
Alignment:
Q  271 catttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttat 370  Q
    ||||||||||| ||| |||| | ||||||||||||| |||||||||| ||||||| |||||| | ||||||  | |||||||||||| | ||||||| ||    
T  13713559 catttatactagcataaacatatttattaacataaatgagattttagaataaacacataaggatacctaattca-gaaataatcatt-ttactatctcat 13713656  T
Q  371 atttattctacttcaaatgtaccattcatatgg 403  Q
    || |||| |  ||||||||||||||||||||||    
T  13713657 atctattttgtttcaaatgtaccattcatatgg 13713689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 4852640 - 4852685
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4852640 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 4852685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5909063 - 5909108
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5909063 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 5909108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13713176 - 13713221
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13713176 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 13713221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13713309 - 13713354
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13713309 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 13713354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 14190488 - 14190533
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14190488 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 14190533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31663362 - 31663317
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31663362 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 31663317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 1505980 - 1506025
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  1505980 tatgagccgtacttcataggctacattatctcttcgttgtagcaaa 1506025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 1506047 - 1506092
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  1506047 tatgagccttacctcataggctacattatctcttcgttgtagcaaa 1506092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 1506113 - 1506158
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1506113 tatgagccgtacctcataggctatattatctcttcgttgtagcaaa 1506158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 1506180 - 1506225
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  1506180 tatgagccatacctcataggctacattatctcttcgttgtagcaaa 1506225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 1506246 - 1506291
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  1506246 tatgagccgtacctcataggctacattatctcttcgttgttgcaaa 1506291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 4852571 - 4852616
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  4852571 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 4852616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5599786 - 5599831
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  5599786 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 5599831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5599852 - 5599897
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  5599852 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 5599897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5599918 - 5599963
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  5599918 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 5599963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 14190554 - 14190599
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  14190554 tatgagccgtacctcgtaggctacattatctcttcgttgtagcaaa 14190599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31663430 - 31663385
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  31663430 tatgagccgtatctcataggctacattatctcttcgttgtagcaaa 31663385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31663631 - 31663586
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  31663631 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 31663586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 5578299 - 5578261
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5578299 cgtacctcataggctacattatctcttcgttgtagcaaa 5578261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 5578372 - 5578326
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaaa 82  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  5578372 tatgagccatacctcattggctacattatctcttcgttgtagcaaaa 5578326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 5578502 - 5578457
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  5578502 tatgagtcgtacctcgtaggctacattatctcttcgttgtagcaaa 5578457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5599984 - 5600029
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  5599984 tatgagccgttcatcataggctacattatctcttcgttgtagcaaa 5600029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5909129 - 5909174
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||    
T  5909129 tatgagtcgttcctcataggctacattatctcttcgttgtagcaaa 5909174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13702616 - 13702661
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  13702616 tatgagtcctacctcataggctacattatctcttcgttgtagcaaa 13702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13713109 - 13713154
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  13713109 tatgagtcctacctcataggctacattatctcttcgttgtagcaaa 13713154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13713243 - 13713288
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  13713243 tatgagtcgtacctcataggctacattatctcttcgtcgtagcaaa 13713288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 31663487 - 31663452
Alignment:
Q  46 acctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||    
T  31663487 acctcataggctacattatctcttcgttgtagcaaa 31663452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 31663562 - 31663519
Alignment:
Q  38 tgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  31663562 tgagccgtaccttataggctacattatctcttcattgtagcaaa 31663519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 4852717 - 4852755
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  4852717 cgtacctcataggctacattatctcttcggtgtagcaaa 4852755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 6735434 - 6735389
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||    
T  6735434 tatgagtcgtatctcataagctacattatctcttcgttgtagcaaa 6735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 13713376 - 13713421
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| | ||||||||||| |||||||||||||||||||||||||    
T  13713376 tatgagtcatacctcataggatacattatctcttcgttgtagcaaa 13713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 5600236 - 5600284
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataa 322  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| ||||    
T  5600236 ttatgctaacataaacatacttattaacataaaagagattttagaataa 5600284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 31663285 - 31663248
Alignment:
Q  44 gtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  31663285 gtacctcataggctacattatctattcattgtagcaaa 31663248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 6735366 - 6735330
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgt 72  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  6735366 tatgagtcgtacctcataagctacattatctcttcgt 6735330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 1e-45; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 271 - 467
Target Start/End: Complemental strand, 20810186 - 20809991
Alignment:
Q  271 catttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttat 370  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||||| |||||||||||||| | ||||||  || |||||||||||||| |||||||||    
T  20810186 catttatactagcataaacatacttattaacataaatgagattttagaataaacaaataaggatacctaattcag-aaataatcattcta-ctatcttat 20810089  T
Q  371 atttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    || ||||||  ||||||||||||||||||||||||| | || |||| ||||||||  |||| |||||||| ||||||||||| |||||||||||||||    
T  20810088 atatattctgtttcaaatgtaccattcatatggcatgatagtcatgcttgcacaatcggcaggtaatcataaaaatggtctaattattcatgttatct 20809991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 467
Target Start/End: Original strand, 5558272 - 5558461
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatt 373  Q
    |||| ||||||| |||| ||||||||||||||||||  |||||| |||| | |||||  || |||| |  || |||||||||||||| |||||| ||||     
T  5558272 ttatgctaacataaacatacttattaacataaaaga--ttttagaataa-ctaataattgtacctagttcag-aaataatcattcta-ctatctcatatc 5558366  T
Q  374 tattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||  |||||||||| |||||||||| ||||  || |||| ||||||||||| |||| |||||| ||||||| ||| |||||||||||||||    
T  5558367 tattctgtttcaaatgtatcattcatatgacatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggcctaattattcatgttatct 5558461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 25336476 - 25336521
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25336476 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 25336521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 3166052 - 3166007
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  3166052 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 3166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5557758 - 5557803
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  5557758 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 5557803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5557824 - 5557869
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  5557824 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 5557869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5557890 - 5557935
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  5557890 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 5557935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 20810455 - 20810410
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  20810455 tatgacccgtacctcataggctacattatctcttcgttgtagcaaa 20810410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 25336671 - 25336716
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  25336671 tatgagccgtacctcataggctacattatcttttcgttgtagcaaa 25336716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 3166119 - 3166075
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaa 80  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  3166119 tatgagccgtaccttataggctacattatctcttcgttgtagcaa 3166075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 26082037 - 26082081
Alignment:
Q  37 atgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  26082037 atgagccgtacctcataggctacattatcacttcgttgtagcaaa 26082081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 3165852 - 3165807
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  3165852 tatgagacgtacctcataagctacattatctcttcgttgtagcaaa 3165807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 3165919 - 3165874
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  3165919 tatgagacgtacctcataagctacattatctcttcgttgtagcaaa 3165874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5557692 - 5557737
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  5557692 tatgagctgtaccttataggctacattatctcttcgttgtagcaaa 5557737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 20810388 - 20810343
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  20810388 tatgaaccatacctcataggctacattatctcttcgttgtagcaaa 20810343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 25336612 - 25336649
Alignment:
Q  44 gtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25336612 gtacctcataggctacattatctcttcgttgtagcaaa 25336649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 26082104 - 26082149
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||    
T  26082104 tatgagtcgtacctcataggctacattatctctccgttgtagcaaa 26082149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5557956 - 5558002
Alignment:
Q  36 tatgagccgtacctcataggctacattatctc-ttcgttgtagcaaa 81  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  5557956 tatgagccgttcctcataggctacattatctctttcgttgtagcaaa 5558002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 21542118 - 21542084
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtag 77  Q
    |||||||||||||||||||||||||||||||||||    
T  21542118 cgtacctcataggctacattatctcttcgttgtag 21542084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5558023 - 5558068
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||    
T  5558023 tatgagtcgttcctcatcggctacattatctcttcgttgtagcaaa 5558068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 4844087 - 4844049
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  4844087 cgtacctcataggctacattatctattcgttgtaacaaa 4844049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 81
Target Start/End: Original strand, 25336552 - 25336582
Alignment:
Q  51 ataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||    
T  25336552 ataggctacattatctcttcgttgtagcaaa 25336582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 3165985 - 3165941
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||    
T  3165985 tatgagtcgtacctcataggctgcattatctcttcg-tgtagcaaa 3165941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 21542184 - 21542147
Alignment:
Q  44 gtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  21542184 gtacctcataagctacattatctctttgttgtagcaaa 21542147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 271 - 467
Target Start/End: Original strand, 4341594 - 4341789
Alignment:
Q  271 catttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttat 370  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||||| |||||||||||||| | ||||||  || |||||||||||||| |||||| ||    
T  4341594 catttatactagcataaacatacttattaacataaatgagattttagaataaacaaataaggatacctaattcag-aaataatcattcta-ctatctcat 4341691  T
Q  371 atttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    |||||||||  ||||||||||||||||||||||||| | || |||| ||||||||  ||||||||||||| ||||||||||| |||| ||| ||||||    
T  4341692 atttattctgtttcaaatgtaccattcatatggcatgatagtcatgcttgcacaatcggcaagtaatcataaaaatggtctaattatccatattatct 4341789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 274 - 467
Target Start/End: Complemental strand, 42785708 - 42785517
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatt 373  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| |||| | |||||  || |||| |  || |||||||||||||| |||||| ||||     
T  42785708 ttatgctaacataaacatacttattaacataaaagagattttagaataa-ctaataattgtacctagttcag-aaataatcattcta-ctatctcatatc 42785612  T
Q  374 tattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||  |||||||||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||||||||| |||||||||||||||    
T  42785611 tattctgtttcaaatgtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggtctaattattcatgttatct 42785517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 346 - 467
Target Start/End: Original strand, 19803496 - 19803617
Alignment:
Q  346 gaaataatcattctaactatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaa 444  Q
    ||||||||||||||| |||||| |||| ||||||  |||||||||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||    
T  19803496 gaaataatcattcta-ctatctcatatctattctgtttcaaatgtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaa 19803594  T
Q  445 tggtctatttattcatgttatct 467  Q
    ||| ||| |||||||||||||||    
T  19803595 tggcctaattattcatgttatct 19803617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 4341217 - 4341262
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4341217 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 4341262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 4341416 - 4341461
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4341416 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 4341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 467
Target Start/End: Complemental strand, 21958192 - 21958107
Alignment:
Q  383 tcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||||||| |||||||||||||| || |||| ||||||||||| |||| |||||| |||| |||||| |||||||||||||||    
T  21958192 tcaaatgtacctttcatatggcataatagtcatgcttgcacaaaagacaagaaatcataaaaaaggtctaattattcatgttatct 21958107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34456383 - 34456338
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34456383 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 34456338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34456449 - 34456404
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34456449 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 34456404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 21958324 - 21958254
Alignment:
Q  271 catttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaat 341  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||| |||||| ||||| ||| ||||||    
T  21958324 catttatactaacatatacatacttattaacataaaagagattttagaataaactaataatggtacctaat 21958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 3078625 - 3078580
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3078625 tatgagccgtacctcataggctacattatctattcgttgtagcaaa 3078580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 4341283 - 4341328
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  4341283 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 4341328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 4341350 - 4341395
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  4341350 tatgagccgtacctcataagctacattatctcttcgttgtagcaaa 4341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 21958540 - 21958495
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  21958540 tatgagccatacctcataggctacattatctcttcgttgtagcaaa 21958495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 42785957 - 42785912
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  42785957 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 42785912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 42786019 - 42785978
Alignment:
Q  40 agccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42786019 agccgtacctcataggctacattatctcttcgttgtagcaaa 42785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48477949 - 48477994
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  48477949 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 48477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48478211 - 48478256
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  48478211 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 48478256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48478277 - 48478322
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  48478277 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 48478322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 3078774 - 3078729
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  3078774 tatgagccgtacctcataagctacgttatctcttcgttgtagcaaa 3078729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 3081127 - 3081172
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||    
T  3081127 tatgagtcgtacctcataggctacgttatctcttcgttgtagcaaa 3081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 21958607 - 21958562
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  21958607 tatgagtcgtacctcataggctatattatctcttcgttgtagcaaa 21958562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34456516 - 34456471
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||    
T  34456516 tatgagccgtacttcatagactacattatctcttcgttgtagcaaa 34456471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48478015 - 48478060
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||    
T  48478015 tatgacccgttcctcataggctacattatctcttcgttgtagcaaa 48478060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48478081 - 48478126
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||    
T  48478081 tatgacccgttcctcataggctacattatctcttcgttgtagcaaa 48478126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 48478343 - 48478388
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| | |||||||||||||||||||||||||||||||||    
T  48478343 tatgagccgttcatcataggctacattatctcttcgttgtagcaaa 48478388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 33616005 - 33615961
Alignment:
Q  37 atgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||    
T  33616005 atgagccgtacctcatagactacattgtctcttcgttgtagcaaa 33615961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 15695430 - 15695391
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgt 75  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  15695430 tatgagctgtacctcataggctacattatctcttcgttgt 15695391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 15702410 - 15702371
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgt 75  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  15702410 tatgagctgtacctcataggctacattatctcttcgttgt 15702371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 3078698 - 3078660
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  3078698 cgtacctcataggctacattatctcatcgttgtagcaaa 3078660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 3078558 - 3078513
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||| ||||||||||||||||||||| ||||    
T  3078558 tatgagtcgtacctcatagactacattatctcttcgttgtaacaaa 3078513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 3081196 - 3081241
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||||    
T  3081196 tatgagtcgtacctcataggctgcattatctcatcgttgtagcaaa 3081241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 3081334 - 3081378
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||    
T  3081334 tatgagtcgtacctcataggctacattatct-ttcgttgtagcaaa 3081378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 15695493 - 15695452
Alignment:
Q  40 agccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  15695493 agccttacctcataggctacattatctcttagttgtagcaaa 15695452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 15702473 - 15702432
Alignment:
Q  40 agccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  15702473 agccttacctcataggctacattatctcttagttgtagcaaa 15702432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 21958473 - 21958428
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||    
T  21958473 tatgagccgtacctcataggttacattatctctttgttttagcaaa 21958428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 48478595 - 48478643
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataa 322  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| ||||    
T  48478595 ttatgctaacataaacatacttattaacataaaagagattttagaataa 48478643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 3081400 - 3081445
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||||||    
T  3081400 tatgagtcgtacctcattggctacattatctctccgttgcagcaaa 3081445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 237 - 467
Target Start/End: Original strand, 51844625 - 51844858
Alignment:
Q  237 tatatacatcaattgcgttg---ggatttgccctccgcatttatactaacatcaacagacttattaacataaaagagatttt-aggataaacaaataagg 332  Q
    ||||||||||||||||||||   | ||||| |  || ||||||||||| ||| |||| ||||||||||||||| |||||||| || |||||||| |||||    
T  51844625 tatatacatcaattgcgttgatagaatttgtctcccacatttatactagcataaacatacttattaacataaatgagatttttagaataaacaattaagg 51844724  T
Q  333 gtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaa 432  Q
     | ||||||  || |||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||| | || |||| ||||||||  |||||    
T  51844725 atacctaattcag-aaataatcattcta-ctatctcatatttattctgtttcaaatgtaccattcatatggcatgatagtcatgcttgcacaatcggcaa 51844822  T
Q  433 gtaatcataaa-atggtctatttattcatgttatct 467  Q
    ||||||||||| | | |||| |||||||||||||||    
T  51844823 gtaatcataaagaggatctaattattcatgttatct 51844858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 467
Target Start/End: Complemental strand, 14114527 - 14114364
Alignment:
Q  302 ataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatttattctacttcaaatgtaccattcatat 401  Q
    ||||| |||||||||| |||||||||||||| | ||||||  | |||||||||||||| ||||||| ||||| ||| |  |||||||||||||||| | |    
T  14114527 ataaatgagattttagaataaacaaataaggatacctaattca-gaaataatcattct-actatctcatattaattttgtttcaaatgtaccattcct-t 14114431  T
Q  402 ggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||| | || |||| ||||||||  || |||||||||| ||||||||||| || ||||||||||||    
T  14114430 ggcatgatagtcatgcttgcacaatcggaaagtaatcataaaaatggtctaattgttcatgttatct 14114364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22208035 - 22208080
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22208035 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 22208080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22208102 - 22208147
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22208102 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 22208147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22207696 - 22207741
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22207696 tatgagccgtatctcataggctacattatctcttcgttgtagcaaa 22207741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22207832 - 22207877
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22207832 tatgagccgtaactcataggctacattatctcttcgttgtagcaaa 22207877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22207901 - 22207946
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  22207901 tatgagccgtacctcataggttacattatctcttcgttgtagcaaa 22207946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22207968 - 22208013
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  22207968 tatgagccgtacctcataggctacattatctcttggttgtagcaaa 22208013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 51844419 - 51844464
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  51844419 tatgagccgtacctcataagctacattatctcttcgttgtagcaaa 51844464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 22207772 - 22207810
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22207772 cgtacctcataggctacattatctcttcgttgtagcaaa 22207810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 14114809 - 14114764
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  14114809 tatgagtcgtaccttataggctacattatctcttcgttgtagcaaa 14114764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 14114949 - 14114904
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  14114949 tatgagccgcacctcgtaggctacattatctcttcgttgtagcaaa 14114904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 15088571 - 15088616
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||    
T  15088571 tatgagccgtacctcatatgctacattatctcttcgttttagcaaa 15088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 15088638 - 15088683
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  15088638 tatgagccgtacctcatagactacattatctcttcattgtagcaaa 15088683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22207629 - 22207674
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||    
T  22207629 tatgagccgtacctcatatgctacattatctcttcgttgtaacaaa 22207674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22211179 - 22211224
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||    
T  22211179 tatgagccgtacctcatatgctacattatctcttcgttttagcaaa 22211224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 22211246 - 22211291
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  22211246 tatgagccgtacctcatagactacattatctcttcattgtagcaaa 22211291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 51844352 - 51844397
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  51844352 tatgagtcgtacctcataggctacattatctcttcgctgtagcaaa 51844397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 14114740 - 14114695
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||    
T  14114740 tatgagtcgtacctcataggttacattatctcttcattgtagcaaa 14114695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 14114878 - 14114833
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||| || |||||||||||||||||||||||||||    
T  14114878 tatgagtcgtacctcgtaagctacattatctcttcgttgtagcaaa 14114833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 51844486 - 51844520
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttc 70  Q
    |||||| ||||||||||||||||||||||||||||    
T  51844486 tatgagtcgtacctcataggctacattatctcttc 51844520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 467
Target Start/End: Complemental strand, 2743127 - 2742936
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatt 373  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| |||| | |||||  || |||| |  || |||||||||||||| |||||| ||||     
T  2743127 ttatgctaacataaacatacttattaacataaaagagattttagaataa-ctaataattgtacctagttcag-aaataatcattcta-ctatctcatatc 2743031  T
Q  374 tattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    ||||||  |||||| ||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||||||||| |||||||||||||||    
T  2743030 tattctgtttcaaaagtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggtctaattattcatgttatct 2742936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 2743568 - 2743523
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2743568 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 2743523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 31314986 - 31315031
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31314986 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 31315031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 31347136 - 31347092
Alignment:
Q  37 atgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31347136 atgagccgtacctcataggctacattatctcttcgttgtagcaaa 31347092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 2743370 - 2743325
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  2743370 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 2743325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 2743436 - 2743391
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  2743436 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 2743391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 2743502 - 2743457
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  2743502 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 2743457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 31315053 - 31315098
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  31315053 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 31315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 31315123 - 31315168
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31315123 tatgagcagtacctcataggctacattatctcttcgttgtagcaaa 31315168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 31315191 - 31315236
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  31315191 tatgagccatacctcataggctacattatctcttcgttgtagcaaa 31315236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31346884 - 31346839
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  31346884 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 31346839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 11951328 - 11951283
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  11951328 tatgagtcgtatctcataggctacattatctcttcgttgtagcaaa 11951283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31347003 - 31346958
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||    
T  31347003 tatgagtcgtaccttataggctacattatctcttcgttgtagcaaa 31346958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 31347070 - 31347025
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  31347070 tatgagccgtatctcatatgctacattatctcttcgttgtagcaaa 31347025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 274 - 467
Target Start/End: Complemental strand, 26514 - 26323
Alignment:
Q  274 ttatactaacatcaacagacttattaacataaaagagattttaggataaacaaataagggtgcctaatcaaggaaataatcattctaactatcttatatt 373  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| |||| | |||||  || |||| |  |  |||||||||||||| |||||| ||||     
T  26514 ttatgctaacataaacatacttattaacataaaagagattttagaataa-ctaataattgtacctagttcat-aaataatcattcta-ctatctcatatc 26418  T
Q  374 tattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaatggtctatttattcatgttatct 467  Q
    |||| |  |||||||||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||||| ||| |||||||||||||||    
T  26417 tattttgtttcaaatgtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaatggcctaattattcatgttatct 26323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 23528 - 23648
Alignment:
Q  347 aaataatcattctaactatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaat 445  Q
    |||||||||||||| |||||| |||||||||||  ||||||| ||||||||||||| ||| | ||  ||| ||||||||  ||||||||||||| |||||    
T  23528 aaataatcattcta-ctatctcatatttattctgtttcaaatataccattcatatgacatgatagttatgcttgcacaattggcaagtaatcataaaaat 23626  T
Q  446 ggtctatttattcatgttatct 467  Q
    |||||| |||||||||||||||    
T  23627 ggtctaattattcatgttatct 23648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 23311 - 23356
Alignment:
Q  287 aacagacttattaacataaaagagattttaggataaacaaataagg 332  Q
    |||| ||||||||||||||| |||||| ||| ||||||||||||||    
T  23311 aacatacttattaacataaatgagattatagaataaacaaataagg 23356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 467
Target Start/End: Complemental strand, 14530326 - 14530205
Alignment:
Q  346 gaaataatcattctaactatcttatatttattctacttcaaatgtaccattcatatggcataacagacatggttgcacaaaaggcaagtaatcat-aaaa 444  Q
    ||||||||||||||| |||||| |||| |||| |  |||||||||| |||||||||||||||  || |||| ||||||||||| |||| |||||| ||||    
T  14530326 gaaataatcattcta-ctatctcatatctattatgtttcaaatgtatcattcatatggcatagtagtcatgcttgcacaaaagacaagaaatcataaaaa 14530228  T
Q  445 tggtctatttattcatgttatct 467  Q
    ||| ||| |||||||||||||||    
T  14530227 tggcctaattattcatgttatct 14530205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5938926 - 5938971
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5938926 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 5938971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 18111445 - 18111490
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18111445 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 18111490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 18111579 - 18111624
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18111579 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 18111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 28034797 - 28034842
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28034797 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 28034842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 19441127 - 19441169
Alignment:
Q  39 gagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19441127 gagccgtacctcataggctacattatctcttcgttgtagcaaa 19441169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5835623 - 5835668
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  5835623 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 5835668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5938859 - 5938904
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  5938859 tatgagccgtacctcataggctacatcatctcttcgttgtagcaaa 5938904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5938993 - 5939038
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  5938993 tatgagccgtacctcatagactacattatctcttcgttgtagcaaa 5939038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 14521091 - 14521046
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  14521091 tatgagccgttcctcataggctacattatctcttcgttgtagcaaa 14521046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 14521157 - 14521112
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  14521157 tatgagccgtacctcatacgctacattatctcttcgttgtagcaaa 14521112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 18111512 - 18111557
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18111512 tatgagcggtacctcataggctacattatctcttcgttgtagcaaa 18111557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 28034664 - 28034709
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  28034664 tatgagccgtacctcataggctacattatttcttcgttgtagcaaa 28034709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 29897061 - 29897106
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  29897061 tatgagccgtacctcataggctacattatttcttcgttgtagcaaa 29897106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 29897116 - 29897161
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  29897116 tatgagccgtacctcataggctacattatctctttgttgtagcaaa 29897161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19384337 - 19384375
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttg 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19384337 tatgagccgtacctcataggctacattatctcttcgttg 19384375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 2746834 - 2746789
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  2746834 tatgagccgtacctcataggctttattatctcttcgttgtagcaaa 2746789  T

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Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5938725 - 5938770
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  5938725 tatgagtcgtacctcatagtctacattatctcttcgttgtagcaaa 5938770  T

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Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 5938792 - 5938837
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  5938792 tatgagtcgtacctcataggctatattatctcttcgttgtagcaaa 5938837  T

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Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 19384094 - 19384139
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  19384094 tatgagtcgtacctcataggctacattatctcttcgtcgtagcaaa 19384139  T

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Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 19384208 - 19384253
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||    
T  19384208 tatgagccgtacctcataggttacattatctcttcgtcgtagcaaa 19384253  T

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Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 19480038 - 19479993
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  19480038 tatgagtcgtacctcataggctatattatctcttcgttgtagcaaa 19479993  T

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Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 28034739 - 28034776
Alignment:
Q  44 gtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28034739 gtacctcataggctacattatctcttcgttgtagcaaa 28034776  T

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Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 45227339 - 45227301
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  45227339 cgtaccacataggctacattatctcttcgttgtagcaaa 45227301  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 19441057 - 19441102
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||    
T  19441057 tatgagtcgtacctcatagactacattatctcttcgtcgtagcaaa 19441102  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 19384148 - 19384187
Alignment:
Q  42 ccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  19384148 ccgtacctcataggttacattatctcttcgtcgtagcaaa 19384187  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 19480098 - 19480064
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtag 77  Q
    |||||||||||||||||||||||||||| ||||||    
T  19480098 cgtacctcataggctacattatctcttcattgtag 19480064  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 45227272 - 45227234
Alignment:
Q  43 cgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  45227272 cgtacctcatgggctacattatctcttcattgtagcaaa 45227234  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 19384282 - 19384315
Alignment:
Q  48 ctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||| ||||||||    
T  19384282 ctcataggctacattatctcttcgtcgtagcaaa 19384315  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 19480164 - 19480127
Alignment:
Q  44 gtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||||| || ||||||||||||||||||||||||||    
T  19480164 gtacctcaaagactacattatctcttcgttgtagcaaa 19480127  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 29897171 - 29897216
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||| ||||||||||||  ||| ||||||||||||||||||||||    
T  29897171 tatgaaccgtacctcataaactatattatctcttcgttgtagcaaa 29897216  T

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Target: scaffold0927 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 3631 - 3676
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  3631 tatgacccgtacctcataggctacattatctcttcgttgtagcaaa 3676  T

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Target: scaffold0927; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 3698 - 3737
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgt 75  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3698 tatgagccgtacctcataggctacattatctcttcgttgt 3737  T

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Target: scaffold0927; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 3564 - 3604
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgta 76  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  3564 tatgagccttacctcataggctacattatctcttcgttgta 3604  T

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Target: scaffold0060 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 40048 - 40003
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  40048 tatgagtcgtacctcataggctacattatctcttcgttgtagcaaa 40003  T

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Target: scaffold0060; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 39981 - 39936
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  39981 tatgagtcatacctcataggctacattatctcttcgttgtagcaaa 39936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 69750 - 69705
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  69750 tatgagccgtacctcataggctacattatctcttcattgtagcaaa 69705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 69809 - 69772
Alignment:
Q  44 gtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  69809 gtacctcataggctacattatctcttcgttgtagcaaa 69772  T

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Target: scaffold0043; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 69884 - 69839
Alignment:
Q  36 tatgagccgtacctcataggctacattatctcttcgttgtagcaaa 81  Q
    |||||| ||| | |||||||||| ||||||||||||||||||||||    
T  69884 tatgagtcgtgcatcataggctatattatctcttcgttgtagcaaa 69839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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