View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5029-Insertion-10 (Length: 387)
Name: NF5029-Insertion-10
Description: NF5029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5029-Insertion-10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 7 - 387
Target Start/End: Original strand, 13356594 - 13356973
Alignment:
| Q |
7 |
acattcttcttaatcatatcataagttgagtctgaactatccaaatcatcttcaatatctatattgctttcaggtgcatcatacacaattaaactttcct |
106 |
Q |
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| T |
13356594 |
acattcttcttaatcatatcataagttgagtctgaactatccaaatcatcttcaatatctatattgctttcaggtgcatcatacacaattaaactttcct |
13356693 |
T |
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| Q |
107 |
catcaggcaaatttagaccggggatagaagttgaacaatcttctaagctagtatttgtccaacgagggatgaacaagatttcatcctcatcatcataagg |
206 |
Q |
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| T |
13356694 |
catcaggcaaatttagaccggggatagaagttgaacaatcttccaagctagtatctgtccaacgagggatgaacaagatttcatcctcctcatcataagg |
13356793 |
T |
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| Q |
207 |
tgatggtaggagctcaattttttcaaacaccctgttcaagaaacattgtacaaattaattagctgcataataatacatgaatctcttnnnnnnnnnncac |
306 |
Q |
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| T |
13356794 |
tgatggtaggagctcaattttttcaaacaccctgttcaagaaacattgtacaaattaattagctgcataat-atacatgaatctcttaaaaaaaacacac |
13356892 |
T |
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| Q |
307 |
caaagaagagaagtttttgttaccaaggcattggccaaagagagaagaaactttatagtgtatgaaattctttaacttctg |
387 |
Q |
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| T |
13356893 |
caaagaagagaggtttttgttaccaaggcattggccaaagagagaagaaactttatagtgtatgaaattctttaacttctg |
13356973 |
T |
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