View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5029-Insertion-4 (Length: 666)
Name: NF5029-Insertion-4
Description: NF5029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5029-Insertion-4 |
 | |
|
| [»] chr7 (7 HSPs) |
| |
|
| [»] chr3 (2 HSPs) |
| |
|
| [»] scaffold0464 (1 HSPs) |
| | |
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| [»] chr2 (4 HSPs) |
| |
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| [»] chr6 (1 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 614; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 614; E-Value: 0
Query Start/End: Original strand, 8 - 666
Target Start/End: Original strand, 19721326 - 19721990
Alignment:
| Q |
8 |
cctcacacttatccctaactggtccaccatgcctgaccaggacttga------attgcagtatcgtaccatttcccgttaccggtttagtagaagacgag |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19721326 |
cctcacacttatccctaactggtccaccatgcctgaccaggacttgaatttgaattgcagtatcgtaccatttcccgttaccggtttagtagaagacgag |
19721425 |
T |
|
| Q |
102 |
gaaatcaccattgacgacgatccttactatctaatgagtgataaggattattgtcagatggttggttcatgtaatggcttgatatgttattcttctgttg |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19721426 |
gaaatcaccattgacgacgatccttactatctaatcagtgataaggattgttgtcagatggttggttcatgtaatggcttgatatgttattcttctgttg |
19721525 |
T |
|
| Q |
202 |
ccaaaaatagaaactggctccgtttttggaatccggccactcattcgttatctgaaaaactattcttgttgagccatggtcgacacaccaaattcacatt |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19721526 |
ccaaaaatagaaactggctccgtttttggaatccggccactcattcgttatctgaaaaactattcttgttgagccatggtcgacacaccaaattcacatt |
19721625 |
T |
|
| Q |
302 |
tggttatgacatttcaactaaaacttataaggtggtggcctactctgaatacaatgtgaaaattctcaccttgggtgataatgtatggaggaatatccaa |
401 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
19721626 |
tggttatgatatttcaactaaaacttataaggtggtggcctactctgaatacaatgtgaaaattctcaccttgggtgataatgtatggaggaatatacga |
19721725 |
T |
|
| Q |
402 |
agttttcctgttgttccttttgatgttgtgcctcctaatggcaattgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttgg |
501 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19721726 |
agttttcctgttgttccttttcatgttgtgcctcctaatggcaattgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttgg |
19721825 |
T |
|
| Q |
502 |
ctattcgaaacacgactgagtatcaatggactgatattttagtcgagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgtt |
601 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19721826 |
ctattcgaaacacgactgagtatcaatggactgatattttagtcgagcaatttgtaattgtctcgcttgatctggctacggagacatatcaacagctgtt |
19721925 |
T |
|
| Q |
602 |
gccacctgaggggtttgttgaagtaccaactgttgagccgtctgttactgtattgatggactgtc |
666 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19721926 |
gccacctgaggggtttgttgaagtaccaactgttgagccgtctgttactgtattgatggactgtc |
19721990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 466 - 666
Target Start/End: Complemental strand, 19351370 - 19351170
Alignment:
| Q |
466 |
atggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatattttagtcgagcaatttgtgattgtctc |
565 |
Q |
| |
|
||||||| |||||||| || ||||||||||||||||||||| ||| | ||| | ||| |||||| ||||||| | ||||||||||||||||| | || |
|
|
| T |
19351370 |
atggtgtgtatgtgagtggatctattaactggttggctattcaaaatattactaaatataaatggaatgatattagaatcgagcaatttgtgattatttc |
19351271 |
T |
|
| Q |
566 |
gcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtctgttactgtattgatggactgt |
665 |
Q |
| |
|
|||||||||| ||||||||||||||||||| | ||||||||| || ||||||||||||||| ||| |||||| || ||||||||||||||||| ||| |
|
|
| T |
19351270 |
acttgatctgggtacggagacatatcaacagtttttgccacctcgtggttttgttgaagtaccacctgctgagccatccgttactgtattgatggattgt |
19351171 |
T |
|
| Q |
666 |
c |
666 |
Q |
| |
|
| |
|
|
| T |
19351170 |
c |
19351170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 446 - 666
Target Start/End: Original strand, 19779351 - 19779571
Alignment:
| Q |
446 |
ttgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatattttagtc |
545 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||| | ||| || ||| | |||| |||||||| | | |
|
|
| T |
19779351 |
ttgtcatccatatgtgaataatggtgtttatgtgagtggcactattaactggttgactattcaaaataagaccgaatatgagtggaatgatatttcaatt |
19779450 |
T |
|
| Q |
546 |
gagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtctg |
645 |
Q |
| |
|
|| |||||| | || |||| ||||||||| |||| ||||| || ||||| || ||||||| |||| |||||||| |||||| ||||||| || ||| |
|
|
| T |
19779451 |
gatcaatttctcatcctctcacttgatctgactaccgagacgtaccaacatttgcggccacctcagggatttgttgatgtaccacctgttgatccagctg |
19779550 |
T |
|
| Q |
646 |
ttactgtattgatggactgtc |
666 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
19779551 |
ttactgtattgatggattgtc |
19779571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 446 - 666
Target Start/End: Complemental strand, 19888032 - 19887812
Alignment:
| Q |
446 |
ttgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatattttagtc |
545 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||| | ||| || ||| | |||| |||||||| | | |
|
|
| T |
19888032 |
ttgtcatccatatgtgaataatggtgtttatgtgagtggcactattaactggttgactattcaaaataagaccgaatatgagtggaatgatatttcaatt |
19887933 |
T |
|
| Q |
546 |
gagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtctg |
645 |
Q |
| |
|
|| |||||| | || |||| ||||||||| |||| ||||| || ||||| || ||||||| |||| |||||||| |||||| ||||||| || ||| |
|
|
| T |
19887932 |
gatcaatttctcatcctctcacttgatctgactaccgagacgtaccaacatttgcggccacctcagggatttgttgatgtaccacctgttgatccagctg |
19887833 |
T |
|
| Q |
646 |
ttactgtattgatggactgtc |
666 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
19887832 |
ttactgtattgatggattgtc |
19887812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 447 - 661
Target Start/End: Original strand, 19357657 - 19357874
Alignment:
| Q |
447 |
tgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactg---agtatcaatggactgatattttag |
543 |
Q |
| |
|
|||||||||||| ||||| ||| || |||||||| ||||||||||||||||||||||||||||| | ||||| | ||| ||||| ||||||| | |
|
|
| T |
19357657 |
tgtcatccatttttgaattgtggcgtgtatgtgagaggcactattaactggttggctattcgaaatatgactgatcaatatgaatggcgtgatattacaa |
19357756 |
T |
|
| Q |
544 |
tcgagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtc |
643 |
Q |
| |
|
| || ||||||||||| ||||| ||||||||||| |||||||||||| ||| || |||||||| || ||||||||||||||| || || |||| | |
|
|
| T |
19357757 |
ttgatcaatttgtgatcgtctcacttgatctggccacggagacatataggcagttgctgccacctagcggttttgttgaagtaccacctattcagccatt |
19357856 |
T |
|
| Q |
644 |
tgttactgtattgatgga |
661 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
19357857 |
tgtaactgtattgatgga |
19357874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 12820365 - 12820317
Alignment:
| Q |
294 |
ttcacatttggttatgacatttcaactaaaacttataaggtggtggcct |
342 |
Q |
| |
|
||||||||||||||||| | ||||||| | ||||| ||||||||||||| |
|
|
| T |
12820365 |
ttcacatttggttatgataattcaactgacacttacaaggtggtggcct |
12820317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 425
Target Start/End: Original strand, 19779208 - 19779336
Alignment:
| Q |
297 |
acatttggttatgacatttcaactaaaacttataaggtggtggcctactctgaatacaatgtgaaaattctcaccttgggtgataatgtatggaggaata |
396 |
Q |
| |
|
|||||||| ||||| ||||||| | | ||||||||||||||||||| |||| || | || |||||| ||| ||| |||||||| | ||||| ||| |
|
|
| T |
19779208 |
acatttggatatgatatttcaaatgacacttataaggtggtggccttttctgccgacgaggtcaaaattttcagtttgagtgataatatttggagagata |
19779307 |
T |
|
| Q |
397 |
tccaaagttttcctgttgttccttttgat |
425 |
Q |
| |
|
| | ||||||||| |||||||||||||| |
|
|
| T |
19779308 |
ttccaagttttcccattgttccttttgat |
19779336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 446 - 666
Target Start/End: Complemental strand, 32579186 - 32578966
Alignment:
| Q |
446 |
ttgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatattttagtc |
545 |
Q |
| |
|
||||||||||| ||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| | |||||| ||| || ||| |||||||| | || |
|
|
| T |
32579186 |
ttgtcatccatatgtgaataacggtgtgtatgtgagtggcactattaattggttggctattcgaaataagactgaatatgaaaggaatgatatttcaatc |
32579087 |
T |
|
| Q |
546 |
gagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtctg |
645 |
Q |
| |
|
||||||||| | ||| | || ||||||||| ||||||||||||| | ||| || ||||| | |||| ||||||||||||||| | |||||||| ||| |
|
|
| T |
32579086 |
gagcaatttctcattttatcacttgatctgactacggagacataccgacatttgctgccatcgcagggatttgttgaagtaccaccggttgagccagctg |
32578987 |
T |
|
| Q |
646 |
ttactgtattgatggactgtc |
666 |
Q |
| |
|
||||||| |||||||| |||| |
|
|
| T |
32578986 |
ttactgtgttgatggattgtc |
32578966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 445 - 661
Target Start/End: Complemental strand, 12735121 - 12734896
Alignment:
| Q |
445 |
attgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaacac---------gactgagtatcaatggactga |
535 |
Q |
| |
|
||||||||||||||| || | |||||| ||||| || |||||| |||||||||||||||||||||| | || ||| ||| |||||| ||| |
|
|
| T |
12735121 |
attgtcatccatttgcgagtcatggtgcgtatgtaagtggcactgttaactggttggctattcgaaatattaaaaatatgaatgaatatgaatggaatga |
12735022 |
T |
|
| Q |
536 |
tattttagtcgagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgtt |
635 |
Q |
| |
|
||||| |||| | ||||||||||| || || |||| ||||||||| ||||||| | ||| |||||||||| | || ||||||||| ||||| ||||| |
|
|
| T |
12735021 |
tatttcagtcaaccaatttgtgatcgtatcacttgttctggctacagagacatttaggcagttgttgccacccaacggttttgttgaaataccacctgtt |
12734922 |
T |
|
| Q |
636 |
gagccgtctgttactgtattgatgga |
661 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
12734921 |
gagccatctgttactgtattgatgga |
12734896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0464 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0464
Description:
Target: scaffold0464; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 443 - 659
Target Start/End: Original strand, 7807 - 8023
Alignment:
| Q |
443 |
caattgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatatttta |
542 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||| | || ||| ||| |||||| |||||||| | |
|
|
| T |
7807 |
caattgtcatccatttgtgagccgtggtgcgtatgtgagtggcactgttaactggttggctattcgaaatatgaatgaatatgaatggaatgatatttca |
7906 |
T |
|
| Q |
543 |
gtcgagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgt |
642 |
Q |
| |
|
|| | ||||||||||| || || |||| ||||||||| ||||||| | ||| || ||||||| | || ||||||||||||||| |||||||||| | |
|
|
| T |
7907 |
atcaaccaatttgtgatcgtatcacttgttctggctacagagacatttaggcagttgctgccacccaacggttttgttgaagtaccacctgttgagccat |
8006 |
T |
|
| Q |
643 |
ctgttactgtattgatg |
659 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
8007 |
ctgttactgtattgatg |
8023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 8e-29; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 445 - 666
Target Start/End: Complemental strand, 18909131 - 18908910
Alignment:
| Q |
445 |
attgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatattttagt |
544 |
Q |
| |
|
|||||| || ||| ||| |||| ||||| |||||||| || ||||||||||||||||||||||| | | |||||| ||| |||||| ||||||| | |
|
|
| T |
18909131 |
attgtcgtcgattggtggataacggtgtgtatgtgagtggttctattaactggttggctattcgagataagactgaatatgaatggaatgatattactat |
18909032 |
T |
|
| Q |
545 |
cgagcaatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtct |
644 |
Q |
| |
|
| | ||||||||||| |||||||||||| ||| ||| |||||||||| || || |||||||| || ||||||||||||||| ||||||| |||||| |
|
|
| T |
18909031 |
caaacaatttgtgatagtctcgcttgatttggatacagagacatatcggcaattgctgccacctagcggttttgttgaagtaccacctgttgaaccgtct |
18908932 |
T |
|
| Q |
645 |
gttactgtattgatggactgtc |
666 |
Q |
| |
|
|||| ||| |||||||| |||| |
|
|
| T |
18908931 |
gttagtgtgttgatggattgtc |
18908910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 463 - 666
Target Start/End: Complemental strand, 18913861 - 18913658
Alignment:
| Q |
463 |
ataatggtgtttatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatattttagtcgagcaatttgtgattgt |
562 |
Q |
| |
|
|||| ||||| |||||||| || || ||||||||||||||||||||| | | ||| | ||| |||||| ||||||| | || ||||||||||| || |
|
|
| T |
18913861 |
ataacggtgtgtatgtgagtggaacaattaactggttggctattcgagatatgaccaattataaatggaatgatattaccattgaacaatttgtgatagt |
18913762 |
T |
|
| Q |
563 |
ctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtctgttactgtattgatggac |
662 |
Q |
| |
|
|||||||||| ||||||| |||||||| |||||| ||||||||||| || |||||||||| |||| | ||||| |||||||||| ||| |||||||| |
|
|
| T |
18913761 |
ctcgcttgatttggctacagagacataccaacagttgttgccacctagcggttttgttgaagcaccacccgttgaaccgtctgttagtgtgttgatggat |
18913662 |
T |
|
| Q |
663 |
tgtc |
666 |
Q |
| |
|
|||| |
|
|
| T |
18913661 |
tgtc |
18913658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 549 - 661
Target Start/End: Complemental strand, 18920983 - 18920871
Alignment:
| Q |
549 |
caatttgtgattgtctcgcttgatctggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtctgtta |
648 |
Q |
| |
|
||||||||||| |||||||||||| ||| ||| |||||||||| || || |||||||| || ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
18920983 |
caatttgtgatagtctcgcttgatttggttacagagacatatcggcaattgctgccacctagcggttttgttgaagtaccacctgttgaaccgtctgtta |
18920884 |
T |
|
| Q |
649 |
ctgtattgatgga |
661 |
Q |
| |
|
||| |||||||| |
|
|
| T |
18920883 |
gtgtgttgatgga |
18920871 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 418
Target Start/End: Complemental strand, 18921200 - 18921079
Alignment:
| Q |
297 |
acatttggttatgacatttcaactaaaacttataaggtggtggcctactctgaatacaatgtgaaaattctcaccttgggtgataatgtatggaggaata |
396 |
Q |
| |
|
|||||||| ||||| ||||||| |||||||||||||||||| || ||||| ||| |||||| || ||| ||| |||||||||| |||||| ||| |
|
|
| T |
18921200 |
acatttggctatgatatttcaaacgaaacttataaggtggtggacttctctgctaacacggtgaaagttttcagtttgagtgataatgtttggagggata |
18921101 |
T |
|
| Q |
397 |
tccaaagttttcctgttgttcc |
418 |
Q |
| |
|
| |||||||||||| ||||||| |
|
|
| T |
18921100 |
ttcaaagttttcctattgttcc |
18921079 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 474 - 666
Target Start/End: Original strand, 14749174 - 14749366
Alignment:
| Q |
474 |
tatgtgagcggcactattaactggttggctattcgaaacacgactgagtatcaatggactgatattttagtcgagcaatttgtgattgtctcgcttgatc |
573 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| ||| | ||| || ||| | | || |||||||| | |||| |||||| | ||||| || ||||||| |
|
|
| T |
14749174 |
tatgtgagtggcagtattaactggttggctattcaaaataagaccgaatatgattagaatgatatttcaatcgaccaatttctcattgtttcacttgatc |
14749273 |
T |
|
| Q |
574 |
tggctacggagacatatcaacagctgttgccacctgaggggtttgttgaagtaccaactgttgagccgtctgttactgtattgatggactgtc |
666 |
Q |
| |
|
| ||||||||||||| | | | ||||||||| |||| ||||||||||||||| |||||||||| |||||||| | |||||||| |||| |
|
|
| T |
14749274 |
taactacggagacataccgtcgtttcttgccacctcagggatttgttgaagtaccatctgttgagccatctgttaccattttgatggattgtc |
14749366 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 28764367 - 28764324
Alignment:
| Q |
296 |
cacatttggttatgacatttcaactaaaacttataaggtggtgg |
339 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
28764367 |
cacatttggttatgacatttcaactggaagttataaggtggtgg |
28764324 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 512
Target Start/End: Complemental strand, 11338889 - 11338839
Alignment:
| Q |
462 |
aataatggtgtttatgtgagcggcactattaactggttggctattcgaaac |
512 |
Q |
| |
|
||||||||||| ||| |||| ||||||||| ||||||||||||||| |||| |
|
|
| T |
11338889 |
aataatggtgtatatttgagaggcactatttactggttggctattcaaaac |
11338839 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 506
Target Start/End: Complemental strand, 11345415 - 11345371
Alignment:
| Q |
462 |
aataatggtgtttatgtgagcggcactattaactggttggctatt |
506 |
Q |
| |
|
||||||||||| ||| |||| ||||||||| |||||||||||||| |
|
|
| T |
11345415 |
aataatggtgtgtatttgagaggcactatttactggttggctatt |
11345371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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