View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5029-Insertion-8 (Length: 444)

Name: NF5029-Insertion-8
Description: NF5029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5029-Insertion-8
NF5029-Insertion-8
[»] chr5 (50 HSPs)
chr5 (177-392)||(41313952-41314167)
chr5 (69-184)||(41312656-41312772)
chr5 (14-70)||(4047537-4047593)
chr5 (15-70)||(2795648-2795703)
chr5 (11-70)||(11636856-11636915)
chr5 (13-70)||(8103576-8103633)
chr5 (14-60)||(3398355-3398401)
chr5 (17-70)||(12641993-12642046)
chr5 (14-70)||(30839906-30839962)
chr5 (14-70)||(36597704-36597760)
chr5 (19-70)||(30893754-30893805)
chr5 (13-70)||(6863681-6863738)
chr5 (17-70)||(31365950-31366003)
chr5 (18-63)||(41350334-41350379)
chr5 (18-70)||(14466495-14466547)
chr5 (17-60)||(32019984-32020027)
chr5 (70-109)||(37073000-37073039)
chr5 (18-66)||(28630007-28630056)
chr5 (9-70)||(34578136-34578197)
chr5 (15-62)||(13515924-13515971)
chr5 (17-60)||(23995416-23995459)
chr5 (18-57)||(29855898-29855937)
chr5 (17-60)||(40980508-40980551)
chr5 (14-60)||(14695110-14695156)
chr5 (11-53)||(29766309-29766351)
chr5 (410-444)||(41314183-41314217)
chr5 (14-60)||(42239588-42239633)
chr5 (10-67)||(10658114-10658170)
chr5 (18-63)||(15191005-15191050)
chr5 (15-70)||(30328328-30328380)
chr5 (7-60)||(35151354-35151407)
chr5 (18-70)||(16174623-16174675)
chr5 (17-56)||(15240950-15240989)
chr5 (17-60)||(35469689-35469732)
chr5 (13-51)||(12332334-12332372)
chr5 (20-70)||(40513076-40513126)
chr5 (17-70)||(11376085-11376138)
chr5 (18-51)||(12332481-12332514)
chr5 (18-51)||(13761672-13761705)
chr5 (17-50)||(19743247-19743280)
chr5 (19-60)||(31567493-31567534)
chr5 (18-51)||(31613150-31613183)
chr5 (18-51)||(31613292-31613325)
chr5 (18-51)||(31704931-31704964)
chr5 (18-51)||(31705073-31705106)
chr5 (18-51)||(40454063-40454096)
chr5 (18-51)||(40454205-40454238)
chr5 (16-60)||(18841704-18841748)
chr5 (16-56)||(26376515-26376555)
chr5 (14-42)||(34333180-34333208)
[»] chr1 (67 HSPs)
chr1 (288-389)||(15785592-15785694)
chr1 (15-70)||(313874-313929)
chr1 (9-60)||(6180321-6180372)
chr1 (15-70)||(6569983-6570038)
chr1 (14-66)||(6307631-6307683)
chr1 (14-62)||(30172012-30172060)
chr1 (14-62)||(30187553-30187601)
chr1 (14-70)||(39150324-39150380)
chr1 (9-60)||(5875207-5875258)
chr1 (15-70)||(6754596-6754651)
chr1 (14-60)||(35512860-35512906)
chr1 (8-70)||(36490904-36490966)
chr1 (15-60)||(34802102-34802147)
chr1 (7-60)||(39310776-39310829)
chr1 (13-70)||(41624954-41625011)
chr1 (14-70)||(17919578-17919634)
chr1 (14-70)||(23576411-23576467)
chr1 (14-70)||(44918149-44918205)
chr1 (15-70)||(1502718-1502773)
chr1 (13-56)||(25465297-25465340)
chr1 (16-63)||(30288863-30288910)
chr1 (14-65)||(51382444-51382495)
chr1 (16-70)||(10896478-10896532)
chr1 (15-56)||(38812879-38812920)
chr1 (9-57)||(5879095-5879143)
chr1 (16-60)||(13322011-13322055)
chr1 (14-60)||(3168065-3168111)
chr1 (14-60)||(22167470-22167516)
chr1 (18-60)||(35438850-35438892)
chr1 (14-67)||(3096337-3096390)
chr1 (17-70)||(23591823-23591876)
chr1 (18-67)||(32201752-32201801)
chr1 (18-67)||(41676561-41676610)
chr1 (14-62)||(4249339-4249387)
chr1 (14-62)||(4249663-4249711)
chr1 (14-62)||(4249987-4250035)
chr1 (14-61)||(19066632-19066679)
chr1 (14-61)||(19114522-19114569)
chr1 (145-184)||(26518711-26518750)
chr1 (15-70)||(30362993-30363048)
chr1 (17-60)||(51920431-51920474)
chr1 (17-70)||(7519996-7520050)
chr1 (18-60)||(9516716-9516758)
chr1 (18-60)||(13241892-13241934)
chr1 (28-70)||(39930812-39930854)
chr1 (29-70)||(8062329-8062370)
chr1 (17-60)||(1366182-1366225)
chr1 (17-60)||(16966500-16966543)
chr1 (17-60)||(25532344-25532387)
chr1 (17-59)||(2222236-2222278)
chr1 (12-42)||(9872972-9873002)
chr1 (25-67)||(25186990-25187032)
chr1 (19-57)||(39781479-39781517)
chr1 (18-60)||(43317598-43317640)
chr1 (13-51)||(44012922-44012960)
chr1 (18-51)||(9661898-9661931)
chr1 (18-51)||(9662040-9662073)
chr1 (19-56)||(32543052-32543089)
chr1 (17-70)||(33673735-33673788)
chr1 (18-51)||(42589174-42589207)
chr1 (18-51)||(42589316-42589349)
chr1 (34-63)||(44007547-44007576)
chr1 (18-51)||(44013069-44013102)
chr1 (9-41)||(7126205-7126237)
chr1 (17-57)||(11013408-11013448)
chr1 (28-60)||(28016315-28016347)
chr1 (13-49)||(34569351-34569387)
[»] scaffold0111 (2 HSPs)
scaffold0111 (14-70)||(37111-37167)
scaffold0111 (17-67)||(41110-41160)
[»] chr2 (61 HSPs)
chr2 (14-70)||(16126556-16126612)
chr2 (13-61)||(6109523-6109571)
chr2 (14-70)||(27665041-27665097)
chr2 (19-70)||(19228550-19228601)
chr2 (14-60)||(8065258-8065304)
chr2 (14-63)||(12016798-12016847)
chr2 (14-70)||(4821401-4821457)
chr2 (14-70)||(24729574-24729630)
chr2 (9-56)||(43388473-43388520)
chr2 (12-70)||(15411617-15411675)
chr2 (17-63)||(20566017-20566063)
chr2 (14-60)||(38248417-38248463)
chr2 (17-58)||(5853463-5853504)
chr2 (13-70)||(7757782-7757839)
chr2 (18-63)||(8770887-8770932)
chr2 (14-63)||(9450389-9450438)
chr2 (15-60)||(9747452-9747497)
chr2 (17-62)||(15231964-15232009)
chr2 (17-58)||(16493532-16493573)
chr2 (19-60)||(26003348-26003389)
chr2 (14-70)||(5583555-5583611)
chr2 (69-109)||(8420423-8420463)
chr2 (14-70)||(14377549-14377605)
chr2 (14-70)||(29157826-29157882)
chr2 (17-56)||(11660894-11660933)
chr2 (18-60)||(16123413-16123455)
chr2 (13-59)||(34817881-34817927)
chr2 (13-63)||(35729249-35729299)
chr2 (17-70)||(16919154-16919207)
chr2 (13-70)||(17265529-17265586)
chr2 (17-58)||(22704674-22704715)
chr2 (14-59)||(29142210-29142255)
chr2 (21-70)||(41492137-41492186)
chr2 (17-70)||(45062323-45062376)
chr2 (8-60)||(36731315-36731367)
chr2 (19-70)||(2060044-2060095)
chr2 (17-60)||(23932700-23932743)
chr2 (13-56)||(25295849-25295892)
chr2 (14-60)||(4576323-4576369)
chr2 (18-60)||(6765135-6765177)
chr2 (17-59)||(7720251-7720293)
chr2 (17-67)||(9895140-9895190)
chr2 (32-70)||(13351226-13351264)
chr2 (18-60)||(34213950-34213992)
chr2 (15-60)||(43806495-43806540)
chr2 (69-109)||(6531390-6531430)
chr2 (12-51)||(3286491-3286530)
chr2 (28-63)||(22705586-22705621)
chr2 (15-49)||(14707010-14707044)
chr2 (19-57)||(15749202-15749240)
chr2 (18-60)||(19183489-19183531)
chr2 (16-70)||(37471740-37471793)
chr2 (18-51)||(3286639-3286672)
chr2 (18-51)||(3951252-3951285)
chr2 (18-51)||(3951394-3951427)
chr2 (18-51)||(8847931-8847964)
chr2 (17-50)||(9047893-9047926)
chr2 (18-51)||(43941855-43941888)
chr2 (18-51)||(43941997-43942030)
chr2 (19-51)||(8847790-8847822)
chr2 (18-70)||(12919351-12919403)
[»] scaffold0061 (1 HSPs)
scaffold0061 (15-70)||(52777-52832)
[»] scaffold0017 (1 HSPs)
scaffold0017 (15-70)||(145802-145857)
[»] chr7 (58 HSPs)
chr7 (15-70)||(3561876-3561931)
chr7 (11-60)||(4969908-4969957)
chr7 (13-70)||(24462951-24463008)
chr7 (14-70)||(7170127-7170183)
chr7 (14-70)||(9332086-9332142)
chr7 (14-70)||(19889465-19889521)
chr7 (19-70)||(18102232-18102283)
chr7 (15-70)||(39757108-39757163)
chr7 (15-60)||(820539-820584)
chr7 (14-63)||(7040249-7040298)
chr7 (17-70)||(25709399-25709452)
chr7 (14-62)||(32117947-32117995)
chr7 (14-70)||(46290135-46290191)
chr7 (10-70)||(47457454-47457514)
chr7 (15-70)||(5909280-5909335)
chr7 (15-70)||(23982753-23982808)
chr7 (15-70)||(33343113-33343168)
chr7 (15-70)||(34270386-34270441)
chr7 (16-70)||(8091311-8091365)
chr7 (16-70)||(36548459-36548513)
chr7 (17-70)||(384431-384483)
chr7 (17-70)||(22334021-22334074)
chr7 (18-70)||(5833480-5833532)
chr7 (17-60)||(8595032-8595075)
chr7 (17-60)||(29398134-29398177)
chr7 (17-60)||(29692540-29692583)
chr7 (15-70)||(33072106-33072161)
chr7 (19-70)||(41331458-41331509)
chr7 (12-63)||(42750415-42750466)
chr7 (17-60)||(45501594-45501637)
chr7 (14-60)||(12085928-12085974)
chr7 (18-60)||(26050462-26050504)
chr7 (18-60)||(26059821-26059863)
chr7 (17-70)||(24250623-24250676)
chr7 (19-60)||(26037228-26037269)
chr7 (16-56)||(22041725-22041765)
chr7 (18-60)||(7899487-7899529)
chr7 (18-60)||(44473513-44473555)
chr7 (16-57)||(6587924-6587965)
chr7 (17-70)||(26300696-26300749)
chr7 (18-67)||(27300557-27300606)
chr7 (10-51)||(42593537-42593578)
chr7 (14-70)||(8170646-8170701)
chr7 (16-59)||(44807035-44807078)
chr7 (69-99)||(2677486-2677516)
chr7 (14-60)||(8561589-8561634)
chr7 (24-66)||(36990972-36991014)
chr7 (19-60)||(2443906-2443947)
chr7 (17-62)||(12482573-12482618)
chr7 (17-62)||(12504003-12504048)
chr7 (18-51)||(28061466-28061499)
chr7 (15-60)||(36032541-36032586)
chr7 (18-51)||(38798071-38798104)
chr7 (18-51)||(38798351-38798384)
chr7 (18-51)||(42593395-42593428)
chr7 (18-51)||(45645511-45645544)
chr7 (18-50)||(28061324-28061356)
chr7 (19-67)||(28323263-28323311)
[»] chr4 (67 HSPs)
chr4 (15-70)||(35999945-36000000)
chr4 (7-62)||(54495627-54495682)
chr4 (13-62)||(27362524-27362573)
chr4 (7-70)||(23051372-23051435)
chr4 (14-60)||(18882264-18882310)
chr4 (16-70)||(29190815-29190869)
chr4 (17-62)||(47326892-47326937)
chr4 (17-62)||(47341688-47341733)
chr4 (12-60)||(3085805-3085853)
chr4 (18-70)||(23553695-23553747)
chr4 (15-70)||(4329719-4329774)
chr4 (15-70)||(49228779-49228834)
chr4 (18-60)||(16667385-16667427)
chr4 (14-60)||(19468329-19468375)
chr4 (17-58)||(4779436-4779477)
chr4 (15-60)||(17409959-17410004)
chr4 (15-60)||(19450898-19450943)
chr4 (14-70)||(7349813-7349869)
chr4 (20-60)||(24684972-24685012)
chr4 (14-70)||(39876955-39877011)
chr4 (14-70)||(41415554-41415610)
chr4 (18-70)||(48910803-48910855)
chr4 (15-70)||(9759140-9759195)
chr4 (17-60)||(23545611-23545654)
chr4 (17-60)||(53961457-53961500)
chr4 (12-70)||(23438280-23438338)
chr4 (14-60)||(27019395-27019441)
chr4 (14-60)||(40049693-40049739)
chr4 (14-60)||(50352437-50352483)
chr4 (18-60)||(52391433-52391475)
chr4 (14-60)||(53376405-53376451)
chr4 (15-60)||(33632201-33632246)
chr4 (15-60)||(34941413-34941458)
chr4 (14-59)||(42479889-42479934)
chr4 (15-56)||(49181211-49181252)
chr4 (14-62)||(8736808-8736856)
chr4 (14-70)||(10813491-10813547)
chr4 (16-56)||(13214415-13214455)
chr4 (17-60)||(46803934-46803977)
chr4 (15-70)||(51691466-51691521)
chr4 (75-109)||(25810033-25810067)
chr4 (16-70)||(25843419-25843473)
chr4 (14-60)||(44916640-44916686)
chr4 (13-46)||(20098619-20098652)
chr4 (17-70)||(40682557-40682609)
chr4 (18-63)||(49250336-49250381)
chr4 (18-67)||(55813992-55814041)
chr4 (9-57)||(16069199-16069247)
chr4 (18-57)||(9971661-9971700)
chr4 (17-60)||(32279206-32279249)
chr4 (13-51)||(32459474-32459512)
chr4 (14-63)||(8919822-8919871)
chr4 (14-60)||(9326862-9326910)
chr4 (14-60)||(9373584-9373632)
chr4 (14-60)||(9381896-9381944)
chr4 (17-70)||(10658417-10658470)
chr4 (17-70)||(10872562-10872615)
chr4 (19-60)||(22130687-22130728)
chr4 (15-60)||(26471321-26471366)
chr4 (18-51)||(32459333-32459366)
chr4 (17-70)||(36971399-36971452)
chr4 (18-51)||(41887570-41887603)
chr4 (18-51)||(41887712-41887745)
chr4 (24-56)||(12499371-12499403)
chr4 (18-46)||(20098610-20098638)
chr4 (16-60)||(24297507-24297551)
chr4 (19-47)||(35645014-35645042)
[»] chr3 (53 HSPs)
chr3 (15-70)||(3863454-3863509)
chr3 (14-70)||(11611101-11611157)
chr3 (14-70)||(16875022-16875078)
chr3 (14-62)||(23523079-23523127)
chr3 (14-62)||(38389580-38389628)
chr3 (15-70)||(29686445-29686500)
chr3 (14-60)||(50204538-50204584)
chr3 (17-70)||(20938182-20938235)
chr3 (14-70)||(2571393-2571449)
chr3 (18-70)||(40497172-40497224)
chr3 (13-57)||(51618185-51618229)
chr3 (15-70)||(32553491-32553546)
chr3 (17-60)||(40930186-40930229)
chr3 (18-60)||(8165781-8165823)
chr3 (14-60)||(10307901-10307947)
chr3 (21-70)||(11611039-11611088)
chr3 (17-58)||(33474473-33474514)
chr3 (11-63)||(41151765-41151817)
chr3 (12-60)||(51401575-51401623)
chr3 (13-60)||(42180187-42180234)
chr3 (17-63)||(13495426-13495472)
chr3 (16-62)||(36426408-36426454)
chr3 (14-60)||(45983641-45983687)
chr3 (18-59)||(31318777-31318818)
chr3 (17-70)||(35414809-35414862)
chr3 (17-70)||(46492343-46492396)
chr3 (14-70)||(12515471-12515527)
chr3 (20-60)||(23803049-23803089)
chr3 (7-63)||(49396512-49396567)
chr3 (13-56)||(25633137-25633180)
chr3 (13-60)||(37055362-37055409)
chr3 (17-63)||(24978778-24978824)
chr3 (18-56)||(46845144-46845182)
chr3 (18-60)||(54527707-54527749)
chr3 (17-58)||(15269160-15269201)
chr3 (17-70)||(36812383-36812435)
chr3 (18-51)||(51567821-51567854)
chr3 (18-70)||(1569191-1569243)
chr3 (15-47)||(38757852-38757884)
chr3 (17-60)||(15862902-15862945)
chr3 (20-66)||(9711073-9711119)
chr3 (18-60)||(23638050-23638092)
chr3 (14-60)||(25513889-25513935)
chr3 (12-50)||(36426556-36426594)
chr3 (16-49)||(2566628-2566661)
chr3 (14-51)||(13495291-13495328)
chr3 (18-63)||(27549676-27549721)
chr3 (18-51)||(29932353-29932386)
chr3 (18-51)||(29932495-29932528)
chr3 (18-51)||(29981507-29981540)
chr3 (18-51)||(29981649-29981682)
chr3 (19-60)||(38277468-38277509)
chr3 (18-50)||(54016169-54016201)
[»] chr8 (68 HSPs)
chr8 (8-70)||(18567407-18567469)
chr8 (14-63)||(10129235-10129284)
chr8 (14-70)||(9801793-9801849)
chr8 (14-70)||(26682193-26682249)
chr8 (11-70)||(35678269-35678328)
chr8 (15-70)||(39024855-39024910)
chr8 (13-63)||(1203733-1203783)
chr8 (14-60)||(27874678-27874724)
chr8 (14-60)||(28014855-28014901)
chr8 (16-70)||(39701802-39701856)
chr8 (14-63)||(7140456-7140505)
chr8 (17-70)||(22838350-22838403)
chr8 (14-70)||(3306052-3306108)
chr8 (18-70)||(13327942-13327994)
chr8 (15-70)||(2161512-2161567)
chr8 (15-66)||(5573415-5573466)
chr8 (13-60)||(8284564-8284611)
chr8 (9-60)||(12189580-12189631)
chr8 (9-60)||(12434008-12434059)
chr8 (17-60)||(13496709-13496752)
chr8 (15-70)||(14816124-14816179)
chr8 (15-70)||(14829561-14829616)
chr8 (17-60)||(38212944-38212987)
chr8 (14-60)||(6818152-6818198)
chr8 (14-60)||(14961660-14961706)
chr8 (14-60)||(31812248-31812294)
chr8 (15-70)||(34405060-34405119)
chr8 (17-58)||(40225987-40226028)
chr8 (18-70)||(4080395-4080447)
chr8 (18-70)||(4084544-4084596)
chr8 (18-70)||(4102851-4102903)
chr8 (11-63)||(19343830-19343882)
chr8 (14-70)||(26363987-26364043)
chr8 (13-60)||(45006104-45006151)
chr8 (14-60)||(9580106-9580152)
chr8 (14-60)||(38843839-38843885)
chr8 (14-63)||(12132115-12132164)
chr8 (15-70)||(297220-297280)
chr8 (12-60)||(7978013-7978061)
chr8 (12-60)||(16445731-16445779)
chr8 (24-60)||(36967077-36967113)
chr8 (15-50)||(15198898-15198933)
chr8 (17-60)||(31263034-31263077)
chr8 (15-70)||(31451449-31451504)
chr8 (14-53)||(43717549-43717588)
chr8 (19-70)||(44091443-44091494)
chr8 (19-70)||(45519564-45519615)
chr8 (18-60)||(14391578-14391620)
chr8 (14-60)||(26834696-26834742)
chr8 (14-60)||(32089463-32089509)
chr8 (15-60)||(12958635-12958680)
chr8 (18-66)||(28866932-28866980)
chr8 (14-70)||(45518077-45518133)
chr8 (18-53)||(11946921-11946956)
chr8 (13-51)||(16586865-16586903)
chr8 (14-60)||(20514768-20514814)
chr8 (18-60)||(32186321-32186363)
chr8 (18-60)||(34107171-34107213)
chr8 (18-51)||(42195-42228)
chr8 (18-51)||(10543630-10543663)
chr8 (18-51)||(10543772-10543805)
chr8 (18-51)||(16586723-16586756)
chr8 (15-60)||(29642738-29642783)
chr8 (18-51)||(42781476-42781509)
chr8 (18-51)||(42781618-42781651)
chr8 (19-67)||(7489730-7489778)
chr8 (35-67)||(8140695-8140727)
chr8 (20-60)||(23840392-23840432)
[»] scaffold0073 (1 HSPs)
scaffold0073 (14-66)||(16532-16584)
[»] chr6 (47 HSPs)
chr6 (15-70)||(2830679-2830734)
chr6 (15-70)||(3853068-3853123)
chr6 (16-70)||(31568234-31568288)
chr6 (17-62)||(10887162-10887207)
chr6 (7-60)||(17552577-17552630)
chr6 (13-70)||(28943765-28943822)
chr6 (15-60)||(34692489-34692534)
chr6 (15-67)||(18332686-18332738)
chr6 (16-60)||(29863301-29863345)
chr6 (15-70)||(14228124-14228179)
chr6 (15-70)||(17596466-17596521)
chr6 (16-63)||(32614943-32614990)
chr6 (14-60)||(13391810-13391856)
chr6 (11-60)||(3261213-3261262)
chr6 (13-62)||(6016989-6017038)
chr6 (18-70)||(31069583-31069635)
chr6 (21-60)||(20979107-20979146)
chr6 (17-60)||(24979149-24979192)
chr6 (17-60)||(27819627-27819670)
chr6 (15-70)||(31169761-31169816)
chr6 (12-70)||(33017849-33017907)
chr6 (14-58)||(8467790-8467834)
chr6 (16-60)||(29065424-29065468)
chr6 (16-60)||(29120277-29120321)
chr6 (17-57)||(30591163-30591203)
chr6 (17-60)||(4371974-4372017)
chr6 (11-46)||(28247136-28247171)
chr6 (16-51)||(28470001-28470036)
chr6 (17-60)||(29074438-29074481)
chr6 (17-60)||(29079202-29079245)
chr6 (17-60)||(29107011-29107054)
chr6 (18-63)||(31503874-31503919)
chr6 (17-53)||(22284749-22284785)
chr6 (19-59)||(23936378-23936418)
chr6 (27-70)||(1017788-1017831)
chr6 (12-51)||(28469853-28469892)
chr6 (12-51)||(34733844-34733883)
chr6 (69-99)||(6468036-6468066)
chr6 (18-56)||(8977467-8977505)
chr6 (18-60)||(31790917-31790959)
chr6 (18-51)||(31503744-31503777)
chr6 (15-60)||(32804751-32804795)
chr6 (18-51)||(34733702-34733735)
chr6 (12-60)||(12454200-12454248)
chr6 (19-59)||(17141411-17141451)
chr6 (14-70)||(28756542-28756598)
chr6 (14-70)||(28759012-28759067)
[»] scaffold0011 (1 HSPs)
scaffold0011 (16-70)||(13210-13264)
[»] scaffold0727 (1 HSPs)
scaffold0727 (18-70)||(5816-5868)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-63)||(182174-182223)
[»] scaffold0155 (1 HSPs)
scaffold0155 (15-63)||(3411-3459)
[»] scaffold0128 (1 HSPs)
scaffold0128 (16-70)||(44293-44347)
[»] scaffold0136 (1 HSPs)
scaffold0136 (19-60)||(1445-1486)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-70)||(94018-94071)
[»] scaffold0618 (1 HSPs)
scaffold0618 (19-70)||(8416-8467)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-46)||(47298-47333)
[»] scaffold0192 (1 HSPs)
scaffold0192 (18-60)||(13564-13606)
[»] scaffold0229 (1 HSPs)
scaffold0229 (17-60)||(24527-24570)
[»] scaffold0074 (1 HSPs)
scaffold0074 (17-60)||(45497-45540)
[»] scaffold0007 (1 HSPs)
scaffold0007 (17-60)||(2448-2491)
[»] scaffold0149 (1 HSPs)
scaffold0149 (18-60)||(22599-22641)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-60)||(191316-191358)
[»] scaffold0157 (1 HSPs)
scaffold0157 (24-56)||(21074-21106)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 2e-87; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 177 - 392
Target Start/End: Original strand, 41313952 - 41314167
Alignment:
Q  177 catatattagcacatgtagcctcgttagaaactagttgtcgagtgcttattgattaccttataattatataagtcaacacaaacttgtcgttgctaatta 276  Q
    |||||||||||||||||||||||||||||| ||||||||  ||| |||| |||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  41313952 catatattagcacatgtagcctcgttagaagctagttgttaagttcttactgattatcttataattatataagtcaacaaaaaattgttgttgctaatta 41314051  T
Q  277 aaaagcttatgtctctttcataatctaaacctccacaacctcttttcctaagtatgcaacgttgctaaacaaaagtcaaagttcaaacaatccaactcgt 376  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  41314052 aaaagcttatgtctctttcaaaatctaaacctcgacaacctcttttcctaagtatgcaacgtggctaaacaaaagtcaaagttcaaacaacccaactcgt 41314151  T
Q  377 gttatttctttctaca 392  Q
    ||||||||||||||||    
T  41314152 gttatttctttctaca 41314167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 41312656 - 41312772
Alignment:
Q  69 ttataattaatagtatgtctcatgtcaaatgtgattttagtnnnnnnnnn-tatacgtatgttttgtaacaattaatcatactcaattgtttgacaggta 167  Q
    ||||||||||||||||||| |||||||||||||||||||||          |||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  41312656 ttataattaatagtatgtcccatgtcaaatgtgattttagtaaaaaaaatatatatgtatgttttgtaacaattaatcatactcaattgtttgacagata 41312755  T
Q  168 cgaaacatacatatatt 184  Q
    ||||||||| |||||||    
T  41312756 cgaaacataaatatatt 41312772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 4047593 - 4047537
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4047593 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 4047537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 2795703 - 2795648
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2795703 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 2795648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 11636915 - 11636856
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11636915 attagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 11636856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 8103576 - 8103633
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  8103576 tagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 8103633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 3398401 - 3398355
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3398401 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3398355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 12641993 - 12642046
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  12641993 gtttttctataatgtgcaaatttgcacatgttaagaagtttaaattaataactt 12642046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 30839962 - 30839906
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  30839962 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 30839906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 36597760 - 36597704
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  36597760 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 36597704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 30893805 - 30893754
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactt 30893754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 6863738 - 6863681
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| || ||||||    
T  6863738 tagggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactt 6863681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 31365950 - 31366003
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  31365950 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagtaactt 31366003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 41350379 - 41350334
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagta 41350334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 14466495 - 14466547
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  14466495 tttttctatcatgtgcaaatttagacatgttaagaagtttaaagtagtaactt 14466547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 32019984 - 32020027
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  32019984 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 32020027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 37073000 - 37073039
Alignment:
Q  70 tataattaatagtatgtctcatgtcaaatgtgattttagt 109  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37073000 tataattaatagtatgtctcatgtcaaatgtgattttagt 37073039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 28630056 - 28630007
Alignment:
Q  18 tttttctatcat-gtgcaaatttgcacatgttaagaagtttaaagtaata 66  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  28630056 tttttctatcatcgtgcaaatttgcacatgataagaagtttaaagtaata 28630007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 34578197 - 34578136
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||| ||| ||||| ||||||||||||||||||||||||||| ||||||||| || ||||||    
T  34578197 taataaggatttttttatcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaactt 34578136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 13515924 - 13515971
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||    
T  13515924 gggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagt 13515971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 23995416 - 23995459
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
T  23995416 gtttttctattatgtgcaaatttgtacatgttaagaagtttaaa 23995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 29855898 - 29855937
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  29855898 tttttctatcatgtgtaaatttgcacatgttaagaagttt 29855937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 40980551 - 40980508
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  40980551 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaa 40980508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 14695110 - 14695156
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  14695110 agggtttttatatcatgtgaaaattcgcacatgttaagaagtttaaa 14695156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 29766351 - 29766309
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatgttaagaa 53  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  29766351 attaaggtttttctatcatgtgcaagtttgcacatgttaagaa 29766309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 41314183 - 41314217
Alignment:
Q  410 gtaaatcgaagaacaaaatcagaacaacaacaata 444  Q
    |||||||||||||||||||||||||||||||||||    
T  41314183 gtaaatcgaagaacaaaatcagaacaacaacaata 41314217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 42239633 - 42239588
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||    
T  42239633 agggtttttctatcatgtgcaaatttgcgcatgtt-agaagtttaaa 42239588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 10658114 - 10658170
Alignment:
Q  10 aattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||| || ||||||    
T  10658114 aattagggtttt-ctatcatgtgcaactttgcacatattaagaagttttaaataataa 10658170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 15191050 - 15191005
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||||    
T  15191050 tttttttatcatgtataaatttgcacatgttaagaagtttaaagta 15191005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 30328328 - 30328380
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||| |||||||   ||||||||||||||||||||||||||||| ||||||    
T  30328328 gggtttttccatcatgt---aatttgcacatgttaagaagtttaaagtagtaactt 30328380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 35151407 - 35151354
Alignment:
Q  7 aataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||| | |||||||| |||||||||||||||||| ||||||| |||||||||    
T  35151407 aataataatggtttttcaatcatgtgcaaatttgcatatgttaaaaagtttaaa 35151354  T

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Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 16174623 - 16174675
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||| |||||||||||||||  |||||| ||||||||| ||||||    
T  16174623 tttttctatcatttgcaaatttgcacatcataagaaatttaaagtagtaactt 16174675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 15240950 - 15240989
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  15240950 gtttttctatcatgtgcaaatttgtacatgttaaaaagtt 15240989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 35469732 - 35469689
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||| ||||||||||||||||| || ||||||    
T  35469732 gtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaa 35469689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 12332334 - 12332372
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  12332334 taggatttttctaacatgtgcaaatttgcacatgttaag 12332372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 40513126 - 40513076
Alignment:
Q  20 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||| |||||||||||||||||| || |||||| || ||||||    
T  40513126 tttctatcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactt 40513076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 11376138 - 11376085
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||| ||||||  ||||| ||| |||||||||||| ||||||    
T  11376138 gtttttctatcatgtgtaaatttatacatgataaaaagtttaaagtagtaactt 11376085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 12332514 - 12332481
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  12332514 tttttctaacatgtgcaaatttgcacatgttaag 12332481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 13761672 - 13761705
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  13761672 tttttctaacatgtgcaaatttgcacatgttaag 13761705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 19743247 - 19743280
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaa 50  Q
    |||||||||||||||||||||||| |||||||||    
T  19743247 gtttttctatcatgtgcaaatttgtacatgttaa 19743280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 31567493 - 31567534
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||| |||||||||||||||||||| || ||||||    
T  31567493 ttttctatcatatgcaaatttgcacatgttaaaaaatttaaa 31567534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 31613150 - 31613183
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  31613150 tttttctaacatgtgcaaatttgcacatgttaag 31613183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 31613325 - 31613292
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  31613325 tttttctaacatgtgcaaatttgcacatgttaag 31613292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 31704931 - 31704964
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  31704931 tttttctaacatgtgcaaatttgcacatgttaag 31704964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 31705106 - 31705073
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  31705106 tttttctaacatgtgcaaatttgcacatgttaag 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 40454063 - 40454096
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  40454063 tttttctaacatgtgcaaatttgcacatgttaag 40454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 40454238 - 40454205
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  40454238 tttttctaacatgtgcaaatttgcacatgttaag 40454205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 18841704 - 18841748
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||| |||| |||||||||||||| ||||||| |||||||||    
T  18841704 ggtttttttatcgtgtgcaaatttgcatatgttaaaaagtttaaa 18841748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 26376515 - 26376555
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||| ||||| ||||||||||||||||| |||||    
T  26376515 ggtttttctattatgtgtaaatttgcacatgttaataagtt 26376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 34333180 - 34333208
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgca 42  Q
    |||||||||||||||||||||||||||||    
T  34333180 agggtttttctatcatgtgcaaatttgca 34333208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 15785694 - 15785592
Alignment:
Q  288 tctctttcataatctaaacctccacaacctcttttcctaagtatgcaacgttgctaaacaaaag-tcaaagttcaaacaatccaactcgtgttatttctt 386  Q
    |||||||||| || |||| ||||| ||||||||||| |||||||||||||| ||||||||||||  |||||||||||||| |||||||||||||||||||    
T  15785694 tctctttcatcatttaaatctccataacctcttttcataagtatgcaacgtggctaaacaaaagcccaaagttcaaacaacccaactcgtgttatttctt 15785595  T
Q  387 tct 389  Q
    |||    
T  15785594 tct 15785592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 313929 - 313874
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  313929 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 313874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 6180372 - 6180321
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6180372 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6180321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 6569983 - 6570038
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6569983 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 6570038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 6307683 - 6307631
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 66  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6307683 agggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 6307631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 30172060 - 30172012
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30172060 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 30172012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 30187601 - 30187553
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30187601 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 30187553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 39150324 - 39150380
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  39150324 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 39150380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 5875207 - 5875258
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5875207 taattaggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 5875258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 6754651 - 6754596
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  6754651 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 6754596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 35512906 - 35512860
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35512906 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 35512860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 36490966 - 36490904
Alignment:
Q  8 ataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  36490966 ataatttgggtttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactt 36490904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 34802147 - 34802102
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34802147 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 34802102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 39310776 - 39310829
Alignment:
Q  7 aataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  39310776 aataaatagggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 39310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 41625011 - 41624954
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  41625011 tagggtttttctatcatgtgcaaatttgcatatgataagaagtttaaagtagtaactt 41624954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 17919634 - 17919578
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  17919634 agggtttttctatcatgtgcaaatttgcacataataagaagtttaaagtagtaactt 17919578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 23576411 - 23576467
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  23576411 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 23576467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 44918205 - 44918149
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  44918205 agggtttttctatcatgtgcaaatttacacatgttaagaaatttaaagtagtaactt 44918149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 1502718 - 1502773
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  1502718 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 1502773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 25465340 - 25465297
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25465340 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 25465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 30288863 - 30288910
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  30288863 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaagta 30288910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 51382495 - 51382444
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaat 65  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  51382495 agggtttttctatcatgtgcaactttgcacatgttaagaagtttaaaataat 51382444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 10896532 - 10896478
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  10896532 ggtttttctatcatgtgtaaaattgcacatgttaagaagtttaaagtagtaactt 10896478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 38812920 - 38812879
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38812920 gggtttttctatcatgtgcaaatttgcacatgttaagaagtt 38812879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 5879095 - 5879143
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  5879095 taattacggtttttctatcatgtgtaaatttgcacatgttaagaagttt 5879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 13322055 - 13322011
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  13322055 ggtttttctatcatgtgcaaatttgcatatgttaagaagtttaaa 13322011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 3168065 - 3168111
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||    
T  3168065 agggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaaa 3168111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 22167516 - 22167470
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||    
T  22167516 agggttttcctatcatgtgcaaatttgcacatgataagaagtttaaa 22167470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 35438892 - 35438850
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 35438850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 3096390 - 3096337
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    ||||||||||||| ||||||||||||||||||| ||| || |||||||||||||    
T  3096390 agggtttttctattatgtgcaaatttgcacatgataaaaaatttaaagtaataa 3096337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 23591876 - 23591823
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||| |||||    
T  23591876 gtttttctatcatgtgcaaatttgcacatgttaagaaattttaaataacaactt 23591823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 32201801 - 32201752
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  32201801 tttttctattatgtgcaaatttgcacatattaagaagtttaaaataataa 32201752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 41676561 - 41676610
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    |||||||||||||||||||||||||||||||||||| || ||| ||||||    
T  41676561 tttttctatcatgtgcaaatttgcacatgttaagaaattcaaaataataa 41676610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 4249387 - 4249339
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  4249387 agggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagt 4249339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 4249711 - 4249663
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  4249711 agggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagt 4249663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 4250035 - 4249987
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  4250035 agggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagt 4249987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 19066679 - 19066632
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaag 61  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  19066679 agggtttttctatcatgtataaatttgcacatgttaaaaagtttaaag 19066632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 19114569 - 19114522
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaag 61  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  19114569 agggtttttctatcatgtataaatttgcacatgttaaaaagtttaaag 19114522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 26518711 - 26518750
Alignment:
Q  145 catactcaattgtttgacaggtacgaaacatacatatatt 184  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26518711 catactcaattgtttgacagttacgaaacatacatatatt 26518750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 30362993 - 30363048
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||| ||| || |||||| || ||||||    
T  30362993 gggtttttctatcatgtgcaaatttgcacatgataacaaatttaaaatagtaactt 30363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 51920431 - 51920474
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  51920431 gtttttctatcatgtgcaaatttgcacatgttaataaatttaaa 51920474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 7519996 - 7520050
Alignment:
Q  17 gtttttctatcatgtgcaaa-tttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||    
T  7519996 gtttttctatcatgtgcaaaattttcacatgttaagaagtttaaaataacaactt 7520050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 9516758 - 9516716
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  9516758 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaa 9516716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 13241934 - 13241892
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  13241934 tttttctatcatgtgaaaatttgcacatgttaagaaatttaaa 13241892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 39930812 - 39930854
Alignment:
Q  28 atgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  39930812 atgtgcaaatttgcacatgataagaagtttaaagtagtaactt 39930854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 8062370 - 8062329
Alignment:
Q  29 tgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  8062370 tgtgcaaatttgcacatgttaaaaagtttaaagtagtaactt 8062329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 1366225 - 1366182
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||    
T  1366225 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaa 1366182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 16966543 - 16966500
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||    
T  16966543 gtttttctatcatgtgcatatttgaacatgttaagaaatttaaa 16966500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 25532387 - 25532344
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||    
T  25532387 gtttttctatcatatgcaaatttgcgcatgttaaaaagtttaaa 25532344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 2222236 - 2222278
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  2222236 gtttttctatcatgtgaaaatttacacatgttaagaaatttaa 2222278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 9873002 - 9872972
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgca 42  Q
    |||||||||||||||||||||||||||||||    
T  9873002 ttagggtttttctatcatgtgcaaatttgca 9872972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 25187032 - 25186990
Alignment:
Q  25 atcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    |||||||| |||||||||||| |||||||||||||| ||||||    
T  25187032 atcatgtgtaaatttgcacatattaagaagtttaaaataataa 25186990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 39781517 - 39781479
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  39781517 ttttctatcatgtgcatatttgcacatgttaaaaagttt 39781479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 43317640 - 43317598
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||    
T  43317640 tttttcaatcatgtacaaatttacacatgttaagaagtttaaa 43317598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 44012922 - 44012960
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  44012922 taggatttttctaacatgtgcaaatttgcacatgttaag 44012960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 9661898 - 9661931
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  9661898 tttttctaacatgtgcaaatttgcacatgttaag 9661931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 9662073 - 9662040
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  9662073 tttttctaacatgtgcaaatttgcacatgttaag 9662040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 32543052 - 32543089
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  32543052 ttttatatcatatgcaaatttgcacatgttaagaagtt 32543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 33673735 - 33673788
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||| |||| ||||    
T  33673735 gtttttctatcatgttcaaatttacacacgctaagaagtttaaaataattactt 33673788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42589174 - 42589207
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  42589174 tttttctaacatgtgcaaatttgcacatgttaag 42589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 42589349 - 42589316
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  42589349 tttttctaacatgtgcaaatttgcacatgttaag 42589316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 44007547 - 44007576
Alignment:
Q  34 aaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||||||||||||||||||||||||    
T  44007547 aaatttgcacatgttaagaagtttaaagta 44007576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 44013102 - 44013069
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  44013102 tttttctaacatgtgcaaatttgcacatgttaag 44013069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 7126205 - 7126237
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgc 41  Q
    |||||| ||||||||||||||||||||||||||    
T  7126205 taattacggtttttctatcatgtgcaaatttgc 7126237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 11013448 - 11013408
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  11013448 gtttttctatcgtatgtaaatttgcacatgttaagaagttt 11013408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 28016347 - 28016315
Alignment:
Q  28 atgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||| ||||||    
T  28016347 atgtgcaaatttgcacatgttaagaattttaaa 28016315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 34569387 - 34569351
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgtta 49  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  34569387 tagggtttttctatcatgtacaaatttgctcatgtta 34569351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 37111 - 37167
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37111 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgataactt 37167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 41160 - 41110
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    |||||||||||||||| ||||||| | ||||||||||||||||| ||||||    
T  41160 gtttttctatcatgtgtaaatttgtatatgttaagaagtttaaaataataa 41110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 16126556 - 16126612
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16126556 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 16126612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 6109571 - 6109523
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaag 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109571 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaag 6109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 27665041 - 27665097
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  27665041 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 27665097  T

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Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 19228601 - 19228550
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 19228550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 8065304 - 8065258
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8065304 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 8065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 12016847 - 12016798
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12016847 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagta 12016798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 4821457 - 4821401
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  4821457 agggtttttctattatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 4821401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 24729574 - 24729630
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  24729574 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 24729630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 43388473 - 43388520
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  43388473 taataagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 43388520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15411617 - 15411675
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||    
T  15411617 ttaggggttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactt 15411675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 20566017 - 20566063
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20566017 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaagta 20566063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 38248417 - 38248463
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  38248417 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 38248463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 5853463 - 5853504
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5853463 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 5853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 7757782 - 7757839
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||    
T  7757782 tagggtttttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactt 7757839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 8770887 - 8770932
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8770887 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagta 8770932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 9450438 - 9450389
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  9450438 agggtttttctatcatgtgcaaatctgcacatgttaagaaatttaaagta 9450389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 9747497 - 9747452
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9747497 gggtttttctatcatgtgcaaattttcacatgttaagaagtttaaa 9747452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 15232009 - 15231964
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  15232009 gtttttctattatgtgcaaatttgcacatgttaagaagtttaaagt 15231964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 16493532 - 16493573
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16493532 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 16493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 26003348 - 26003389
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26003348 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 26003389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 5583555 - 5583611
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| || ||||||    
T  5583555 agggtttttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactt 5583611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 8420423 - 8420463
Alignment:
Q  69 ttataattaatagtatgtctcatgtcaaatgtgattttagt 109  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8420423 ttataattaatagtatgtctcatgtcaaatgtgattttagt 8420463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 14377605 - 14377549
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  14377605 agggattttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactt 14377549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 29157826 - 29157882
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || || ||||||    
T  29157826 agggtttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactt 29157882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 11660894 - 11660933
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11660894 gtttttctatcatgtgcaaatttgcacatgttaagaagtt 11660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 16123455 - 16123413
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  16123455 tttttctatcatgtgcaaatttgcacatgataagaagtttaaa 16123413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 34817927 - 34817881
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    |||||||||||||||||||||||| || |||||||||||||||||||    
T  34817927 tagggtttttctatcatgtgcaaacttacacatgttaagaagtttaa 34817881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 35729299 - 35729249
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  35729299 tagggtttttctaacatgtacaaatttgcacatgttgagaagtttaaagta 35729249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 16919154 - 16919207
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  16919154 gtttatctatcatgtgcaaatttgcacatattaacaagtttaaagtagtaactt 16919207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17265586 - 17265529
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||| || ||||||    
T  17265586 tagggtttttctatcatgtccaaatttgcacttgttaagaaatttaaaatagtaactt 17265529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 22704715 - 22704674
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  22704715 gtttttctatcatgtgcaaatttgcacatcttaagaagttta 22704674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 29142255 - 29142210
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  29142255 agggtttttctatcatgtgcaaatttacacatgtttagaagtttaa 29142210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 41492137 - 41492186
Alignment:
Q  21 ttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  41492137 ttctatcatgtataaatttgcacatgataagaagtttaaagtaataactt 41492186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 45062376 - 45062323
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| || ||||||    
T  45062376 gtttttctatcatgtgcaaatttgcacatattaagaagttcaaaatagtaactt 45062323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 36731367 - 36731315
Alignment:
Q  8 ataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  36731367 ataataagggtttttctatcatgtgtaaatttacacatgttaagaaatttaaa 36731315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 2060044 - 2060095
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||| ||||||    
T  2060044 ttttctatgatgtgcaaatttacacatgttaagaaatttaaagtagtaactt 2060095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 23932743 - 23932700
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||| || ||||||||||||||    
T  23932743 gtttttctatcatgtgcaaatttgcatatattaagaagtttaaa 23932700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 25295849 - 25295892
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  25295849 tagggtttttctatcatttgcaaatttgcacatgttaggaagtt 25295892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 4576323 - 4576369
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  4576323 agggtttttctatcatgtgcaaattcgcatatgttaagaaatttaaa 4576369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 6765177 - 6765135
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  6765177 tttttctatcatgtgtagatttgcacatgttaagaagtttaaa 6765135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 7720293 - 7720251
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  7720293 gtttttctatcatgtgcaaatttgcacgtgttaaaaagtttaa 7720251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 9895190 - 9895140
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    ||||||||||||| ||||||||| || ||||||||||||||||| ||||||    
T  9895190 gtttttctatcatatgcaaattttcaaatgttaagaagtttaaaataataa 9895140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 13351226 - 13351264
Alignment:
Q  32 gcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactt 13351264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 34213950 - 34213992
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  34213950 tttttctatcgtgtgcaaatttgcacatgttaagaaatttaaa 34213992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 43806540 - 43806495
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||| |||| ||||||||||||||||| |||||||||    
T  43806540 gggtttttctatcgtgtgtaaatttgcacatgttaaaaagtttaaa 43806495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 6531390 - 6531430
Alignment:
Q  69 ttataattaatagtatgtctcatgtcaaatgtgattttagt 109  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  6531390 ttataattaatagaacgtctcatgtcaaatgtgattttagt 6531430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 3286491 - 3286530
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  3286491 ttaggatttttctaacatgtgcaaatttgcacatgttaag 3286530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 22705621 - 22705586
Alignment:
Q  28 atgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||||| |||||||||||||||||    
T  22705621 atgtgcaaatttgcacattttaagaagtttaaagta 22705586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 14707010 - 14707044
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgtta 49  Q
    ||||||||||||||||||||||||| |||||||||    
T  14707010 gggtttttctatcatgtgcaaatttacacatgtta 14707044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 15749202 - 15749240
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  15749202 ttttctattttgtgcaaatttgcacatgttaagaagttt 15749240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 19183531 - 19183489
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||| ||||||| || |||||||||||||||||    
T  19183531 tttttctatcatgtacaaatttacatatgttaagaagtttaaa 19183489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 37471740 - 37471793
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||| || ||||||    
T  37471740 ggtttttct-tcaagtgaaaatttgcacatgttaagaagtttaaaatagtaactt 37471793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 3286672 - 3286639
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  3286672 tttttctaacatgtgcaaatttgcacatgttaag 3286639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 3951252 - 3951285
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  3951252 tttttctaacatgtgcaaatttgcacatgttaag 3951285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 3951427 - 3951394
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  3951427 tttttctaacatgtgcaaatttgcacatgttaag 3951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 8847964 - 8847931
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  8847964 tttttctaacatgtgcaaatttgcacatgttaag 8847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 9047893 - 9047926
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaa 50  Q
    ||||||| ||||||||||||||||||||||||||    
T  9047893 gtttttccatcatgtgcaaatttgcacatgttaa 9047926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 43941855 - 43941888
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  43941855 tttttctaacatgtgcaaatttgcacatgttaag 43941888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 43942030 - 43941997
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  43942030 tttttctaacatgtgcaaatttgcacatgttaag 43941997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 8847790 - 8847822
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||||| |||||||||||||||||||||||||    
T  8847790 ttttctaacatgtgcaaatttgcacatgttaag 8847822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 12919351 - 12919403
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||| |||||||||||||||| |||||||||| || |||||| || ||||||    
T  12919351 tttttttatcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactt 12919403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 52777 - 52832
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52777 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 52832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 145857 - 145802
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  145857 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 145802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 3561876 - 3561931
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3561876 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 3561931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 4969957 - 4969908
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4969957 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 4969908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 24462951 - 24463008
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24462951 tagggtatttctatcatgtgcaaatttgcacatgttaagaagtttaaaataataactt 24463008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 7170183 - 7170127
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  7170183 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 7170127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 9332142 - 9332086
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  9332142 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactt 9332086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 19889521 - 19889465
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  19889521 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 19889465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 18102232 - 18102283
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18102232 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaattaataactt 18102283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 39757108 - 39757163
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  39757108 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactt 39757163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 820539 - 820584
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  820539 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 7040249 - 7040298
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7040249 agggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagta 7040298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 25709399 - 25709452
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  25709399 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactt 25709452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 32117995 - 32117947
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32117995 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagt 32117947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 46290191 - 46290135
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  46290191 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 46290135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 47457454 - 47457514
Alignment:
Q  10 aattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||| |||||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  47457454 aatttgggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactt 47457514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 5909280 - 5909335
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  5909280 gggtttttctatcatgtgtaaatttgcacatgataagaagtttaaagtagtaactt 5909335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 23982753 - 23982808
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  23982753 gggtttttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactt 23982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 33343168 - 33343113
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  33343168 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 33343113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 34270441 - 34270386
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  34270441 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 34270386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 8091311 - 8091365
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  8091311 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactt 8091365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 36548459 - 36548513
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  36548459 ggtttttttatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactt 36548513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 384431 - 384483
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  384431 gtttttctatcat-tgcaaatttgcacatgttaagaagtttaaagtagtaactt 384483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 22334021 - 22334074
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||    
T  22334021 gtttttcaatcatgtgcaaatttgtacatgttaagaagtttaaagtagtaactt 22334074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 5833532 - 5833480
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  5833532 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaactt 5833480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 8595075 - 8595032
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  8595075 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaa 8595032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 29398134 - 29398177
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaagaagtttaaa 29398177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 29692540 - 29692583
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  29692540 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 29692583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 33072161 - 33072106
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| || ||||||    
T  33072161 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactt 33072106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 41331458 - 41331509
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  41331458 ttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactt 41331509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 42750466 - 42750415
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  42750466 ttaggggttttctatcatatgcaaatttgcatatgttaagaagtttaaagta 42750415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 45501637 - 45501594
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaagaagtttaaa 45501594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 12085928 - 12085974
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||    
T  12085928 agggtttttctatcatgtgcaaatttgcacataataagaagtttaaa 12085974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 26050462 - 26050504
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  26050462 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 26050504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 26059821 - 26059863
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  26059821 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 26059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 24250676 - 24250623
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  24250676 gtttttctatcatgtggaaatttgaacatgataagaagtttaaagtagtaactt 24250623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 26037269 - 26037228
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaa 26037228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 22041725 - 22041765
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  22041725 ggtttttctatcatgtgcaaatttgcacttgttaagaagtt 22041765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 7899487 - 7899529
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaa 7899529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 44473513 - 44473555
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  44473513 tttttttatcatgtgcaaatttgaacatgttaagaagtttaaa 44473555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 6587965 - 6587924
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  6587965 ggtttttctatcatgtgcaaatttgcacatattaaaaagttt 6587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 26300749 - 26300696
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||| || ||||||    
T  26300749 gtttttccatcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactt 26300696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 27300606 - 27300557
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||| |||||    
T  27300606 tttttttatcatgtacaaatttgcacatattaagaagtttaaagcaataa 27300557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 42593578 - 42593537
Alignment:
Q  10 aattagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  42593578 aattaggatttttctaacatgtgcaaatttgcacatgttaag 42593537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 8170701 - 8170646
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||| |||||||| ||||||| |||||||||| |||||||||||| ||||||    
T  8170701 agggttttt-tatcatgtacaaatttacacatgttaaaaagtttaaagtagtaactt 8170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 44807078 - 44807035
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    ||||||||||||||||||||||||||||||| ||| || |||||    
T  44807078 ggtttttctatcatgtgcaaatttgcacatgataataaatttaa 44807035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 99
Target Start/End: Complemental strand, 2677516 - 2677486
Alignment:
Q  69 ttataattaatagtatgtctcatgtcaaatg 99  Q
    |||||||||||||||||||||||||||||||    
T  2677516 ttataattaatagtatgtctcatgtcaaatg 2677486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 8561634 - 8561589
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  8561634 agggtttttttatcatgtgcaaatttg-acatgttaagacgtttaaa 8561589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 36990972 - 36991014
Alignment:
Q  24 tatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 66  Q
    |||||||| ||| |||||| |||||||||||||||||||||||    
T  36990972 tatcatgtacaagtttgcatatgttaagaagtttaaagtaata 36991014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 2443906 - 2443947
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||| | ||||||| ||||||||||||||||||||    
T  2443906 ttttctatcatattcaaatttacacatgttaagaagtttaaa 2443947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 12482573 - 12482618
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||||    
T  12482573 gtttttctatcatatgtgaatttgcacatgttaagaagttcaaagt 12482618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 12504003 - 12504048
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||||    
T  12504003 gtttttctatcatatgtgaatttgcacatgttaagaagttcaaagt 12504048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 28061499 - 28061466
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  28061499 tttttctaacatgtgcaaatttgcacatgttaag 28061466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 36032541 - 36032586
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||| ||||| |||||| ||||||||||||| ||||||    
T  36032541 gggtttttctattatgtgaaaattttcacatgttaagaaatttaaa 36032586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 38798071 - 38798104
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  38798071 tttttctaacatgtgcaaatttgcacatgttaag 38798104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 38798384 - 38798351
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  38798384 tttttctaacatgtgcaaatttgcacatgttaag 38798351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42593395 - 42593428
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  42593395 tttttctaacatgtgcaaatttgcacatgttaag 42593428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 45645544 - 45645511
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  45645544 tttttctaacatgtgcaaatttgcacatgttaag 45645511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 28061324 - 28061356
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaa 50  Q
    |||||||| ||||||||||||||||||||||||    
T  28061324 tttttctaacatgtgcaaatttgcacatgttaa 28061356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 28323311 - 28323263
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    |||||||||||||| |||||| |||||||||| || |||||| ||||||    
T  28323311 ttttctatcatgtgtaaatttacacatgttaaaaaatttaaaataataa 28323263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 35999945 - 36000000
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35999945 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 36000000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 54495627 - 54495682
Alignment:
Q  7 aataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54495627 aataataagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 54495682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 27362573 - 27362524
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27362573 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 27362524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 23051372 - 23051435
Alignment:
Q  7 aataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  23051372 aataataagggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactt 23051435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 18882264 - 18882310
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18882264 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18882310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 29190815 - 29190869
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  29190815 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactt 29190869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 47326892 - 47326937
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47326892 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 47326937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 47341688 - 47341733
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47341688 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 47341733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 3085853 - 3085805
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3085853 ttagggtttttctatcatgtgcaaatttgcacattttaagaagtttaaa 3085805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 23553747 - 23553695
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  23553747 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactt 23553695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 4329774 - 4329719
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  4329774 gggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactt 4329719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 49228834 - 49228779
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  49228834 gggtttttctatcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactt 49228779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 16667385 - 16667427
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 16667427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 19468375 - 19468329
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  19468375 agggtttttctattatgtgcaaatttgcacatgttaagaagtttaaa 19468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 4779436 - 4779477
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4779436 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 17410004 - 17409959
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  17410004 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaa 17409959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 19450898 - 19450943
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  19450898 gggtttttctattatgtgcaaatttgcacatgttaagaagtttaaa 19450943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 7349869 - 7349813
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||    
T  7349869 agggtttttctatcatgtgtaaatttgtacatgataagaagtttaaagtagtaactt 7349813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 24685012 - 24684972
Alignment:
Q  20 tttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaa 24684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 39877011 - 39876955
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||    
T  39877011 agggtttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactt 39876955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 41415554 - 41415610
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  41415554 agggtttttatatcatgtgcaaatttgcacatgataataagtttaaagtagtaactt 41415610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 48910803 - 48910855
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  48910803 tttttctatcatatgcaaatttgcatatgttaagaagtttaaagtagtaactt 48910855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 9759140 - 9759195
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| || ||||||    
T  9759140 gggtttttctatcatgtacaaatttgcacatgttaagaaatttaaaatagtaactt 9759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 23545654 - 23545611
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaataagtttaaa 23545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 53961500 - 53961457
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  53961500 gtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaa 53961457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23438338 - 23438280
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||| || ||||||    
T  23438338 ttagggtttttctattatgtgcaaatttgcacatgttgagaattttaaaatagtaactt 23438280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 27019441 - 27019395
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27019441 agggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaa 27019395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 40049739 - 40049693
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  40049739 agggtttttctattatgtgcaaatttgcacatgttaagaaatttaaa 40049693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 50352483 - 50352437
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  50352483 agggtttttctatcatatgcaaatttgcacatgttaagaaatttaaa 50352437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 52391475 - 52391433
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaa 52391433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 53376405 - 53376451
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  53376405 agggtttttttatcatgtgaaaatttgcacatgttaagaagtttaaa 53376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 33632201 - 33632246
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  33632201 gggtttttctatcatgtgcgaatttgcacatgttaaaaagtttaaa 33632246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 34941458 - 34941413
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||    
T  34941458 gggtttttctatcatgtgcgaatttgcacatgataagaagtttaaa 34941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 42479889 - 42479934
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  42479889 agggattttctatcatgtgcaaatttgcacatgttaagaaatttaa 42479934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 49181252 - 49181211
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  49181252 gggtttttctatcatgtgcaaatttgcacctgttaagaagtt 49181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 8736808 - 8736856
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  8736808 agggtttttctatcgtgtgtaaatttgcacatgttaagaaatttaaagt 8736856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 10813491 - 10813547
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||    
T  10813491 agggtttttctatcatgtgcagatttgcatatgataataagtttaaagtagtaactt 10813547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 13214415 - 13214455
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  13214415 ggtttttctattatgtgcaaatttgcacatgttaagaagtt 13214455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 46803977 - 46803934
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  46803977 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaa 46803934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 51691521 - 51691466
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||| |||||||||||||||||||| ||| || || ||||||    
T  51691521 gggtttttctatcatgtgtaaatttgcacatgttaagaaattttaaatagtaactt 51691466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 25810067 - 25810033
Alignment:
Q  75 ttaatagtatgtctcatgtcaaatgtgattttagt 109  Q
    |||||||||||||||||||||||||||||||||||    
T  25810067 ttaatagtatgtctcatgtcaaatgtgattttagt 25810033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 25843473 - 25843419
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||| ||||||||||| | ||||||| |||||||||||| ||||||    
T  25843473 ggtttttctatcacgtgcaaatttgtagatgttaaaaagtttaaagtagtaactt 25843419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 44916640 - 44916686
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||    
T  44916640 agggtttttctatcatgtgcaaatttgcacatattaaaaaatttaaa 44916686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 20098652 - 20098619
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatg 46  Q
    ||||||||||||||||||||||||||||||||||    
T  20098652 tagggtttttctatcatgtgcaaatttgcacatg 20098619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 40682609 - 40682557
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| || ||||||    
T  40682609 gtttttctatcatgtgcaa-tttgcacatgttaagaaatttaaaatagtaactt 40682557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 49250336 - 49250381
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||    
T  49250336 tttttctaacatgtgcaaatttgcatatgttaagaaatttaaagta 49250381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 55814041 - 55813992
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    ||||| |||||| |||||||||||||||||||| ||||||||| ||||||    
T  55814041 tttttgtatcatatgcaaatttgcacatgttaaaaagtttaaaataataa 55813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 16069199 - 16069247
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    |||||| ||||| ||| |||| |||||||||||||||||||||||||||    
T  16069199 taattaaggtttatctgtcatatgcaaatttgcacatgttaagaagttt 16069247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 9971661 - 9971700
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  9971661 tttttctatcatgtgcaaatttatacatgttaagaagttt 9971700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 32279249 - 32279206
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||    
T  32279249 gtttttttatcatgtgtaaatttgcacatgttaaaaagtttaaa 32279206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 32459512 - 32459474
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  32459512 taggatttttctaacatgtgcaaatttgcacatgttaag 32459474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 8919871 - 8919822
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||  | ||||||| |||||| ||||||||||||||||    
T  8919871 agggtttttctatcaaatacaaatttacacatgataagaagtttaaagta 8919822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 9326862 - 9326910
Alignment:
Q  14 agggtttttctatcatgtgcaaa--tttgcacatgttaagaagtttaaa 60  Q
    ||||||| |||||||||||||||  ||||||||||||||||| ||||||    
T  9326862 agggtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaa 9326910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 9373584 - 9373632
Alignment:
Q  14 agggtttttctatcatgtgcaaa--tttgcacatgttaagaagtttaaa 60  Q
    ||||||| |||||||||||||||  ||||||||||||||||| ||||||    
T  9373584 agggtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaa 9373632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 9381896 - 9381944
Alignment:
Q  14 agggtttttctatcatgtgcaaa--tttgcacatgttaagaagtttaaa 60  Q
    ||||||| |||||||||||||||  ||||||||||||||||| ||||||    
T  9381896 agggtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaa 9381944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 10658417 - 10658470
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||| |||||||||| |||||||||||||||| || |||||| || ||||||    
T  10658417 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactt 10658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 10872562 - 10872615
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||| |||||||||| |||||||||||||||| || |||||| || ||||||    
T  10872562 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactt 10872615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 22130728 - 22130687
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||| |||||||||||| |||||||||| |||||||||    
T  22130728 ttttctattatgtgcaaatttacacatgttaaaaagtttaaa 22130687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 26471366 - 26471321
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  26471366 gggtttttctaacatgtacaaatttacacatattaagaagtttaaa 26471321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 32459333 - 32459366
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  32459333 tttttctaacatgtgcaaatttgcacatgttaag 32459366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 36971452 - 36971399
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||| |||||||||| | ||||||||||| |||||| || ||||||    
T  36971452 gtttttctatcaagtgcaaatttacgcatgttaagaaatttaaaatagtaactt 36971399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 41887570 - 41887603
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  41887570 tttttctaacatgtgcaaatttgcacatgttaag 41887603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 41887745 - 41887712
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  41887745 tttttctaacatgtgcaaatttgcacatgttaag 41887712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 12499403 - 12499371
Alignment:
Q  24 tatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||| |||||||||||||||||||||||    
T  12499403 tatcatgtgtaaatttgcacatgttaagaagtt 12499371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 46
Target Start/End: Original strand, 20098610 - 20098638
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatg 46  Q
    |||||||||||||||||||||||||||||    
T  20098610 tttttctatcatgtgcaaatttgcacatg 20098638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 24297551 - 24297507
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||| ||| ||||| ||||||||||||||||||||| |||||    
T  24297551 ggtttttttatgatgtgtaaatttgcacatgttaagaagattaaa 24297507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 35645014 - 35645042
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgt 47  Q
    |||||||||||||||||||||||||||||    
T  35645014 ttttctatcatgtgcaaatttgcacatgt 35645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 3863509 - 3863454
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3863509 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 3863454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 11611157 - 11611101
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11611157 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 11611101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 16875022 - 16875078
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  16875022 agggtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 16875078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 23523127 - 23523079
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23523127 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 23523079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 38389628 - 38389580
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38389628 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 38389580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 29686500 - 29686445
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  29686500 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 29686445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 50204584 - 50204538
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  50204584 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 50204538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 20938235 - 20938182
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  20938235 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 20938182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 2571449 - 2571393
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  2571449 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 2571393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 40497224 - 40497172
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  40497224 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 40497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 51618229 - 51618185
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  51618229 tagggtttttctatcatgtgcaaatttgcacatgttaagaagttt 51618185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 32553546 - 32553491
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  32553546 gggtttttctatcatgtgtaaatttacacatgttaagaagtttaaattaataactt 32553491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 40930229 - 40930186
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40930229 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 40930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 8165823 - 8165781
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8165823 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 8165781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 10307947 - 10307901
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  10307947 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 10307901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 11611088 - 11611039
Alignment:
Q  21 ttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11611088 ttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 11611039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 33474473 - 33474514
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33474473 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 41151817 - 41151765
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||    
T  41151817 attaggatttttctatcatgtgcaaatttacacatgataagaagtttaaagta 41151765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 51401623 - 51401575
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  51401623 ttagggtttttctattatgtacaaatttgcacatgttaagaagtttaaa 51401575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 42180234 - 42180187
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  42180234 taggatttttctatcatgtgtaaatttgcacatgttaagaagtttaaa 42180187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 13495472 - 13495426
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  13495472 gtttttctatcatgtgaaaatttgcacatgataagaagtttaaagta 13495426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 36426408 - 36426454
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  36426408 ggtttttctatcatgtgtaaatttacacatgttaagaagtttaaagt 36426454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 45983687 - 45983641
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  45983687 agggtttttttatcatgtgcaaatttgcacaggttaagaagtttaaa 45983641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 31318818 - 31318777
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  31318818 tttttctatcatgtgaaaatttgcacatgttaagaagtttaa 31318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 35414809 - 35414862
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| || ||||||    
T  35414809 gtttttctatcatgtgcaaatttacacatgttaagaagttcaaaatagtaactt 35414862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 46492343 - 46492396
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||    
T  46492343 gtttttctatcatgtgcaaattttcacacgttaagaaatttaaagtagtaactt 46492396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 12515471 - 12515527
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||| || ||||||    
T  12515471 agggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactt 12515527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 23803049 - 23803089
Alignment:
Q  20 tttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  23803049 tttctatcatatgcaaatttgcacatgttaagaagtttaaa 23803089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 49396567 - 49396512
Alignment:
Q  7 aataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||||||||||||    
T  49396567 aataattagg-tttttctaccatgtgcaaatttgtacatattaagaagtttaaagta 49396512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 25633180 - 25633137
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  25633180 tagggtttttctatcatgtgcaaatttgaacttgttaagaagtt 25633137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 37055362 - 37055409
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  37055362 taggatttttctatcatgtgaaaatttgcacatattaagaagtttaaa 37055409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 24978824 - 24978778
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  24978824 gtttttctatcatgtacaagtttgcacatgttaacaagtttaaagta 24978778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 46845144 - 46845182
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  46845144 tttttctatcatgtgcaaatttgtacatgttaagaagtt 46845182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 54527707 - 54527749
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  54527707 tttttctattatgtgcaaatttgcacatgttaagaaatttaaa 54527749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 15269160 - 15269201
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  15269160 gtttttctatcatatgtaaatttgcacatgttaagaagttta 15269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 36812435 - 36812383
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||| | || |||||||||||||||||||||||||||||| ||||||    
T  36812435 gtttttctatcct-tgtaaatttgcacatgttaagaagtttaaagtagtaactt 36812383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 51567821 - 51567854
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||||||||||||||||||||||||||||||||    
T  51567821 tttttctatcatgtgcaaatttgcacatgttaag 51567854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 1569191 - 1569243
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||  ||||| | ||||||||||||||||||| |||||||||    
T  1569191 tttttctatcatgtataaattcgtacatgttaagaagtttaaaataataactt 1569243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 38757884 - 38757852
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgt 47  Q
    |||||||||||||||||||||||||||||||||    
T  38757884 gggtttttctatcatgtgcaaatttgcacatgt 38757852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 15862902 - 15862945
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  15862902 gtttttctatcatgtgtaaattcgcacatgttaaggagtttaaa 15862945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 9711119 - 9711073
Alignment:
Q  20 tttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 66  Q
    |||||| |||||||||||||||| ||||||||||||| ||| |||||    
T  9711119 tttctaacatgtgcaaatttgcatatgttaagaagttcaaaataata 9711073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 23638050 - 23638092
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||    
T  23638050 tttttatatcatgagcaaatttgcacatgttaagaaatttaaa 23638092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 25513889 - 25513935
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  25513889 agggtttttccaacatgtgcaaatctgcacatattaagaagtttaaa 25513935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 36426594 - 36426556
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaa 50  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  36426594 ttagggtttttctatcatgtgcaacattgcacatgttaa 36426556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 2566661 - 2566628
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgtta 49  Q
    |||||||||||||||||||||||| |||||||||    
T  2566661 ggtttttctatcatgtgcaaatttacacatgtta 2566628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 13495291 - 13495328
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  13495291 agggtttgtctaacatgtgcaaatttgcacatgttaag 13495328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 27549721 - 27549676
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||| ||||||||||||||||||||||| || |||| ||||    
T  27549721 tttttctattatgtgcaaatttgcacatgttaaaaaatttagagta 27549676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 29932353 - 29932386
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  29932353 tttttctaacatgtgcaaatttgcacatgttaag 29932386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 29932528 - 29932495
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  29932528 tttttctaacatgtgcaaatttgcacatgttaag 29932495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 29981507 - 29981540
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  29981507 tttttctaacatgtgcaaatttgcacatgttaag 29981540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 29981682 - 29981649
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  29981682 tttttctaacatgtgcaaatttgcacatgttaag 29981649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 38277509 - 38277468
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||  ||||| |||||||||||||||||||||||||||    
T  38277509 ttttctacgatgtgtaaatttgcacatgttaagaagtttaaa 38277468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 54016169 - 54016201
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaa 50  Q
    |||||||||||||||||||||||||||| ||||    
T  54016169 tttttctatcatgtgcaaatttgcacattttaa 54016201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 18567407 - 18567469
Alignment:
Q  8 ataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  18567407 ataaatagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactt 18567469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 10129284 - 10129235
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10129284 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 10129235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 9801849 - 9801793
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  9801849 agggtttttcaatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactt 9801793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 26682249 - 26682193
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  26682249 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactt 26682193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 35678269 - 35678328
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  35678269 attagggtttttttatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 35678328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 39024855 - 39024910
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  39024855 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactt 39024910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 1203783 - 1203733
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1203783 tagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagta 1203733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 27874678 - 27874724
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27874678 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 27874724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 28014855 - 28014901
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28014855 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 28014901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 39701802 - 39701856
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  39701802 ggtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactt 39701856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 7140456 - 7140505
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7140456 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagta 7140505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 22838403 - 22838350
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  22838403 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaataaaaactt 22838350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 3306052 - 3306108
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  3306052 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 3306108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 13327942 - 13327994
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactt 13327994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 2161567 - 2161512
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  2161567 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 2161512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 5573466 - 5573415
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 66  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  5573466 gggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaataata 5573415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 8284564 - 8284611
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  8284564 tagggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 8284611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 12189580 - 12189631
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  12189580 taattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaa 12189631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 12434008 - 12434059
Alignment:
Q  9 taattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  12434008 taattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaa 12434059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 13496709 - 13496752
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 13496752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 14816124 - 14816179
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  14816124 gggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactt 14816179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 14829616 - 14829561
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  14829616 gggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactt 14829561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 38212944 - 38212987
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 38212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 6818198 - 6818152
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  6818198 agggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 6818152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 14961660 - 14961706
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  14961660 agggtttttctatcatgtgcaaatttgcacatgctaagaagtttaaa 14961706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 31812294 - 31812248
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  31812294 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaa 31812248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 34405060 - 34405119
Alignment:
Q  15 gggtttttctatcatgtgcaaattt----gcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  34405060 gggtttttctatcatgtgcaaatttatttgcacatgttaagaagtttaaagtaataactt 34405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 40225987 - 40226028
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40225987 gtttttctatcatgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 4080395 - 4080447
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  4080395 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactt 4080447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 4084544 - 4084596
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  4084544 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactt 4084596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 4102851 - 4102903
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  4102851 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactt 4102903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 19343830 - 19343882
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  19343830 attagggtttttttatcatgtgcaaatttgcacatgttaacacgtttaaagta 19343882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 26363987 - 26364043
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| || ||||||    
T  26363987 agggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactt 26364043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 45006151 - 45006104
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  45006151 tagggtttttctatcataagcaaatttgcacatgttaagaagtttaaa 45006104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 9580106 - 9580152
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  9580106 agggtttttttatcatgtgcaaatttacacatgttaagaagtttaaa 9580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 38843885 - 38843839
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  38843885 agggtttttctatcatgtgtaaatttgcacatgctaagaagtttaaa 38843839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 12132164 - 12132115
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  12132164 agggtttttctatcatctgcaaacttgcacatgttaagaaatttaaagta 12132115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 297280 - 297220
Alignment:
Q  15 gggtttttctatcatgtgcaaa-----tttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||| |||||||||    
T  297280 gggtttttctatcatgtgcaaagcaaatttgcacatgttaagaagtttaaaataataactt 297220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 7978061 - 7978013
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  7978061 ttagggtttttctatcatatgcaaatttgcaaatgttaaaaagtttaaa 7978013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 16445731 - 16445779
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  16445731 ttagagtttttctattatgtgcaaatttgcacatattaagaagtttaaa 16445779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 36967077 - 36967113
Alignment:
Q  24 tatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||    
T  36967077 tatcatgtgcaaatttgcacatgttaagaagtttaaa 36967113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 15198898 - 15198933
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaa 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  15198898 gggtttttctatcatgtgcaaatttgcacatgttaa 15198933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 31263077 - 31263034
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  31263077 gtttttctatcatatgcaaatttgcacatgttaagtagtttaaa 31263034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 31451504 - 31451449
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||   |||||||||| ||||||||||||||||||| ||||||    
T  31451504 gggtttttctatcatggataaatttgcacgtgttaagaagtttaaagtagtaactt 31451449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 43717549 - 43717588
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaa 53  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  43717549 agggtttttctatcatgtgcaaatttacacatgttaagaa 43717588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 44091494 - 44091443
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||| ||||||    
T  44091494 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactt 44091443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 45519564 - 45519615
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||  |||||||||||||| |||||||||||||||| ||||||    
T  45519564 ttttctatcatgcacaaatttgcacatgataagaagtttaaagtagtaactt 45519615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 14391578 - 14391620
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  14391578 tttttctatgatgtccaaatttgcacatgttaagaagtttaaa 14391620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 26834742 - 26834696
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||    
T  26834742 agggtttttctatcatgtgcaaatttgcatatattaagaaatttaaa 26834696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 32089463 - 32089509
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||||    
T  32089463 agggtttttctattatatgcaaatttgcacatgttaagcagtttaaa 32089509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 12958680 - 12958635
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||    
T  12958680 gggtttttctatcatgtgcaaatttgtacatattaagaagcttaaa 12958635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 28866932 - 28866980
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 66  Q
    ||||||||||||||||||||||| | || |||||||||||||| |||||    
T  28866932 tttttctatcatgtgcaaatttgtatatattaagaagtttaaaataata 28866980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 45518133 - 45518077
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||| |||||||||||||||||||||| ||||  ||||||||||||| || ||||||    
T  45518133 aggggttttctatcatgtgcaaatttgtacataataagaagtttaaactagtaactt 45518077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 11946921 - 11946956
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaa 53  Q
    ||||||||||||||| ||||||||||||||||||||    
T  11946921 tttttctatcatgtgtaaatttgcacatgttaagaa 11946956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 16586903 - 16586865
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  16586903 taggatttttctaacatgtgcaaatttgcacatgttaag 16586865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 20514814 - 20514768
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||| |||||||||||||||| ||||||||| |||||||| ||||||    
T  20514814 aggggttttctatcatgtgcatatttgcacaggttaagaaatttaaa 20514768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 32186363 - 32186321
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||| |||||||||||||| ||||||| |||||||||    
T  32186363 tttttctatcgtgtgcaaatttgcatatgttaataagtttaaa 32186321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 34107171 - 34107213
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||| ||||||||| || |||||||||||||||||    
T  34107171 tttttctatcatatgcaaatttacatatgttaagaagtttaaa 34107213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42195 - 42228
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  42195 tttttctaacatgtgcaaatttgcacatgttaag 42228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 10543630 - 10543663
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  10543630 tttttctaacatgtgcaaatttgcacatgttaag 10543663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 10543805 - 10543772
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  10543805 tttttctaacatgtgcaaatttgcacatgttaag 10543772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 16586723 - 16586756
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  16586723 tttttctaacatgtgcaaatttgcacatgttaag 16586756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 29642783 - 29642738
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||||    
T  29642783 gggtttttctatcatgtgcaaatttgcatatgataaggaatttaaa 29642738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42781476 - 42781509
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  42781476 tttttctaacatgtgcaaatttgcacatgttaag 42781509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 42781651 - 42781618
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  42781651 tttttctaacatgtgcaaatttgcacatgttaag 42781618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 7489778 - 7489730
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    ||||||||||||||||||||||  |||||| |||| |||||| ||||||    
T  7489778 ttttctatcatgtgcaaatttgtgcatgtttagaattttaaaataataa 7489730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 8140727 - 8140695
Alignment:
Q  35 aatttgcacatgttaagaagtttaaagtaataa 67  Q
    |||||||||||||||||||| ||||||||||||    
T  8140727 aatttgcacatgttaagaagattaaagtaataa 8140695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23840432 - 23840392
Alignment:
Q  20 tttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||| ||||| ||||||||||||||| ||||||||||||||    
T  23840432 tttccatcatatgcaaatttgcacatattaagaagtttaaa 23840392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 16532 - 16584
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 66  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16532 agggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagtaata 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 2830679 - 2830734
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  2830679 gggtttttctatcatgtacaaatttgcacatgttaagaagtttaaaataataactt 2830734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 3853123 - 3853068
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  3853123 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactt 3853068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 31568288 - 31568234
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  31568288 ggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactt 31568234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 10887207 - 10887162
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 10887162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 17552577 - 17552630
Alignment:
Q  7 aataattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17552577 aataataagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 17552630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 28943765 - 28943822
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  28943765 tagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 28943822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 34692534 - 34692489
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34692534 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 34692489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 18332686 - 18332738
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataa 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  18332686 gggtttttctatcatgtgcaaattttcacatgttaagaagtttaaagtgataa 18332738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 29863301 - 29863345
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29863301 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 29863345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 14228124 - 14228179
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  14228124 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactt 14228179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 17596521 - 17596466
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  17596521 gggtttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactt 17596466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 32614943 - 32614990
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  32614943 ggtttttctatcatgtacaaatttgcacatgttaagaagtttaaagta 32614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 13391856 - 13391810
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  13391856 agggtttttctatcatgtgcaaatttgcgcatgttaagaagtttaaa 13391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 3261262 - 3261213
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  3261262 attagggtttttctatcatgtgcaaatttacacatgttaaaaagtttaaa 3261213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 6017038 - 6016989
Alignment:
Q  13 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 62  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  6017038 taggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagt 6016989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 31069583 - 31069635
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  31069583 tttttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactt 31069635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 20979146 - 20979107
Alignment:
Q  21 ttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20979146 ttctatcatgtgcaaatttgcacatgttaagaagtttaaa 20979107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 24979149 - 24979192
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  24979149 gtttttctatcatgtgcaaatttgcacatgttaagatgtttaaa 24979192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 27819627 - 27819670
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27819627 gtttttctatcatgtacaaatttgcacatgttaagaagtttaaa 27819670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 31169761 - 31169816
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||| ||||||    
T  31169761 gggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactt 31169816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 33017907 - 33017849
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||| ||||||||||||||||||||||| || |||||| || ||||||    
T  33017907 ttagggtttttctattatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactt 33017849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 8467834 - 8467790
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagttta 58  Q
    |||||||||||||||| |||||||||| |||||||||||||||||    
T  8467834 agggtttttctatcatatgcaaatttgtacatgttaagaagttta 8467790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 29065424 - 29065468
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  29065424 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29065468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 29120277 - 29120321
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  29120277 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29120321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 30591163 - 30591203
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagttt 57  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  30591163 gtttttctatcatgtgcaaatttacacatgttaagaagttt 30591203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 4372017 - 4371974
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||| |||||||| ||||||||||||||||||||    
T  4372017 gtttttctatcatgcgcaaatttacacatgttaagaagtttaaa 4371974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 28247136 - 28247171
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatg 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  28247136 attagggtttttctatcatgtgcaaatttgcacatg 28247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 28470036 - 28470001
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  28470036 ggtttttctatcatgtgcaaatttgcacatgttaag 28470001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 29074438 - 29074481
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  29074438 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 29079202 - 29079245
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  29079202 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29079245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 29107011 - 29107054
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  29107011 gtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29107054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 31503919 - 31503874
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||    
T  31503919 tttttctaatatgtgcaaatttgcacatgttaagaaatttaaagta 31503874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 22284785 - 22284749
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaa 53  Q
    ||||||||||||||||||||||||||||||| |||||    
T  22284785 gtttttctatcatgtgcaaatttgcacatgtcaagaa 22284749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 23936378 - 23936418
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  23936378 ttttttatcatgtgcaaatttgcacatgttaacaagtttaa 23936418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 1017788 - 1017831
Alignment:
Q  27 catgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||| |||||| ||||||||||||||||||||||| ||||||    
T  1017788 catgtgtaaatttacacatgttaagaagtttaaagtagtaactt 1017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 28469853 - 28469892
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  28469853 ttaggatttttctaacatgtgcaaatttgcacatgttaag 28469892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 34733883 - 34733844
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaag 51  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  34733883 ttaggatttttctaacatgtgcaaatttgcacatgttaag 34733844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 99
Target Start/End: Original strand, 6468036 - 6468066
Alignment:
Q  69 ttataattaatagtatgtctcatgtcaaatg 99  Q
    |||||||||||||||||||||||||||||||    
T  6468036 ttataattaatagtatgtctcatgtcaaatg 6468066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 8977467 - 8977505
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  8977467 tttttctatcatgtgtaaatttgcacttgttaagaagtt 8977505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 31790917 - 31790959
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||    
T  31790917 tttttctatcatatgcaaatttgcacatattaagaaatttaaa 31790959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 31503744 - 31503777
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  31503744 tttttctaacatgtgcaaatttgcacatgttaag 31503777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 32804795 - 32804751
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||    
T  32804795 gggtttttctatcatgt-caaatttgaacatgttaagatgtttaaa 32804751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 34733702 - 34733735
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaag 51  Q
    |||||||| |||||||||||||||||||||||||    
T  34733702 tttttctaacatgtgcaaatttgcacatgttaag 34733735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 12454248 - 12454200
Alignment:
Q  12 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||| || |||||||||||| |||| || ||||||    
T  12454248 ttagggtttttctatcatatgtaaatttgcacattttaaaaaatttaaa 12454200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 17141451 - 17141411
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaa 59  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  17141451 ttttttatcatgtgcaaatttgcatatgttaagatgtttaa 17141411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 28756542 - 28756598
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||| ||||||||  |||||||||||||| ||||||||||| || || ||||||    
T  28756542 agggtttatctatcataagcaaatttgcacattttaagaagttttaaatagtaactt 28756598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 28759012 - 28759067
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||| |||| | |||||||||||||||||||||||||||  | |||||||||    
T  28759012 agggttttt-tatcttatgcaaatttgcacatgttaagaagttttgaataataactt 28759067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 13264 - 13210
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  13264 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactt 13210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 5868 - 5816
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  5868 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactt 5816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 182223 - 182174
Alignment:
Q  14 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  182223 agggtttttctatcatgtgtaaatttgtacatgttaagaagtttaaagta 182174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3411 - 3459
Alignment:
Q  15 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagta 63  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  3411 gggtttttctatcatgtgtaaatttgcacatattaagaagtttaaagta 3459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 44293 - 44347
Alignment:
Q  16 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||| |||||    
T  44293 ggtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaataacaactt 44347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 1445 - 1486
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  1445 ttttttatcatgtgcaaatttgcacatgttaagaagtttaaa 1486  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 94018 - 94071
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||||||||||||||| |||||||||||||| || || ||||||    
T  94018 gtttttctatcatgtgcaaatttgcatatgttaagaagttttaaatactaactt 94071  T

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Target: scaffold0618 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 8416 - 8467
Alignment:
Q  19 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtaataactt 70  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||| ||||||    
T  8416 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactt 8467  T

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Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 47298 - 47333
Alignment:
Q  11 attagggtttttctatcatgtgcaaatttgcacatg 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  47298 attagggtttttctatcatgtgcaaatttgcacatg 47333  T

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Target: scaffold0192 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 13564 - 13606
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  13564 tttttctaatatgtgcaaatttgcacatgttaagaagtttaaa 13606  T

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Target: scaffold0229 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 24527 - 24570
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||    
T  24527 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaa 24570  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 45497 - 45540
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||||||||||||||||| || |||| ||||||||||||    
T  45497 gtttttctatcatgtgcaaatttacatatgtaaagaagtttaaa 45540  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 2448 - 2491
Alignment:
Q  17 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    |||||||||||||||||||||||||| |||| ||||| ||||||    
T  2448 gtttttctatcatgtgcaaatttgcatatgtcaagaattttaaa 2491  T

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Target: scaffold0149 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 22641 - 22599
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||    
T  22641 tttttctattatgtacaaatttgcacatgttaagaaatttaaa 22599  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 191316 - 191358
Alignment:
Q  18 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 60  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||    
T  191316 tttttttattatgtgcaaatttgcacatgttaagaaatttaaa 191358  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 21074 - 21106
Alignment:
Q  24 tatcatgtgcaaatttgcacatgttaagaagtt 56  Q
    ||||||||| |||||||||||||||||||||||    
T  21074 tatcatgtgtaaatttgcacatgttaagaagtt 21106  T

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