View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5029_high_14 (Length: 322)
Name: NF5029_high_14
Description: NF5029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5029_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 62 - 307
Target Start/End: Complemental strand, 34021706 - 34021461
Alignment:
| Q |
62 |
atcaccaccatgcctgatgcaaaaggcaagaatatatatacttagatcatataagtgttgggaataaagatctaatgttannnnnnngttaataaaagtt |
161 |
Q |
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| T |
34021706 |
atcatcaccatgcctgatgcaaaaggcaagaatatatatacttagatcatataagtgttgggaataaagatataatgttatttttttgttaataaaagtt |
34021607 |
T |
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| Q |
162 |
tagggtatgggactcaaatcaataacttttcgaacattatactccactcgatcaacaaatttaaagatcatcatatattgctccttaattcttgttcatg |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
34021606 |
tagggtatgggactcaaatcaataacttttcgaacattagactccactcgatcaacaaatttaaagatcatcttatattgctccttaattcttgttcatg |
34021507 |
T |
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| Q |
262 |
gaatttaagaacataattggttacacaaaattcaacagttattaat |
307 |
Q |
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|||||||| |||||||||||||||| |||||||||||||||||||| |
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| T |
34021506 |
gaatttaaaaacataattggttacataaaattcaacagttattaat |
34021461 |
T |
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