View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5029_high_25 (Length: 250)
Name: NF5029_high_25
Description: NF5029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5029_high_25 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 10677672 - 10677913
Alignment:
| Q |
1 |
taaaaagtattagttagcagtcaaaagatttgggcatcttcatatgcctttcacatgcagatttttaaagtatgagtgttcacgagtctgagtctggtta |
100 |
Q |
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| T |
10677672 |
taaaaagtattagttagcagtcaaaagatttgggcatcttcatatgcctttcacatgcagatttttaaagtatgagtgttcacgagtctgagtctggtta |
10677771 |
T |
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| Q |
101 |
gatagagtttgctctaacttgttatcgaacttgatcaatttaatttgatttggagtggatctattcgtatttgtgaatactcctaacttaatttcgagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10677772 |
gatagagtttgctctaacttgttatcgaacttgatcaatttagtttgatttggagtgaatctattcgtatttgtgaatactcctaacttaatttcaagaa |
10677871 |
T |
|
| Q |
201 |
atataatttggttttaagaaaaataaaaataacttttcatct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
10677872 |
atataatttggttttaagaaaaataaaaataacttttcatct |
10677913 |
T |
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