View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5030-Insertion-7 (Length: 221)

Name: NF5030-Insertion-7
Description: NF5030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5030-Insertion-7
NF5030-Insertion-7
[»] scaffold0294 (1 HSPs)
scaffold0294 (8-221)||(9796-10006)
[»] chr6 (19 HSPs)
chr6 (79-221)||(5382312-5382454)
chr6 (84-218)||(5094708-5094842)
chr6 (84-218)||(5158702-5158836)
chr6 (105-218)||(5104094-5104207)
chr6 (100-218)||(5369127-5369245)
chr6 (100-218)||(5424420-5424538)
chr6 (114-217)||(5432075-5432178)
chr6 (114-217)||(5175534-5175637)
chr6 (114-217)||(5277361-5277464)
chr6 (100-218)||(5349042-5349162)
chr6 (84-218)||(5068275-5068409)
chr6 (100-218)||(5342361-5342479)
chr6 (100-213)||(5355833-5355946)
chr6 (161-217)||(5075009-5075065)
chr6 (105-217)||(5133127-5133239)
chr6 (125-212)||(5183194-5183281)
chr6 (84-218)||(5395710-5395844)
chr6 (170-213)||(5691398-5691441)
chr6 (177-217)||(5261440-5261480)
[»] chr4 (7 HSPs)
chr4 (105-217)||(4334220-4334332)
chr4 (105-217)||(4351897-4352009)
chr4 (113-217)||(4125670-4125774)
chr4 (105-217)||(4322324-4322436)
chr4 (113-217)||(4359078-4359182)
chr4 (114-217)||(4135013-4135116)
chr4 (84-217)||(4343609-4343742)
[»] chr5 (1 HSPs)
chr5 (110-217)||(8876471-8876578)
[»] chr7 (1 HSPs)
chr7 (84-217)||(36215093-36215226)
[»] chr2 (1 HSPs)
chr2 (132-217)||(22585570-22585655)


Alignment Details
Target: scaffold0294 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 221
Target Start/End: Original strand, 9796 - 10006
Alignment:
Q  8 gtaacatctaactcataaatctttttagcttacaatgtgttataaaatttaaatcttgaaataggtatattaggtgcttacagttttttcaaataaaaca 107  Q
    |||||| ||||||||||||| |||||  |||||   |||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  9796 gtaacaactaactcataaatgtttttcacttac---gtgttataaattttaaatcatgaaataggtatatgaggtgcttacagttttttcaaataaaaca 9892  T
Q  108 ttaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcat 207  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||| | |||||||||||| |||||||||||| ||||||||||| ||||| |||||||    
T  9893 ttaagcacatcctcttgaaaccataacctactacggtcctcaggatcccttggtgatttttcacgaatgatttcccttcccatatctcgtaataaatcat 9992  T
Q  208 gcattccaagtgta 221  Q
    ||||||||||||||    
T  9993 gcattccaagtgta 10006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 5382454 - 5382312
Alignment:
Q  79 aggtgcttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgat 178  Q
    ||||||||||| ||| || ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  5382454 aggtgcttacaatttgttgaaataaaacaccaaggacatcctcatgaaaccataacctgctacgctcctcaggatcctttggtgatttttcacgaatgat 5382355  T
Q  179 ttctcttcccatatcccgtaacaaatcatgcattccaagtgta 221  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  5382354 ttctcttcccatatcccttaacaaatcatgcattccaagtgta 5382312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 5094842 - 5094708
Alignment:
Q  84 cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc 183  Q
    |||||||||| |||  |||| |||| ||||||||| ||||||||||| |||||||||||||||||  | | || ||||||||| | ||||||||||||||    
T  5094842 cttacagtttgttctgataatacatgaagcacatcatcatgaaaccacaacctgcaacgctcctcgagctcctctggtgatttctcacgaatgatttctc 5094743  T
Q  184 ttcccatatcccgtaacaaatcatgcattccaagt 218  Q
    |||||||||| || |||||||||||||||||||||    
T  5094742 ttcccatatctcgcaacaaatcatgcattccaagt 5094708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 5158702 - 5158836
Alignment:
Q  84 cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc 183  Q
    |||||||||| |||  |||| |||| ||||||||| ||||||||||| |||||||||||||||||    | || ||||||||| | ||||||||||||||    
T  5158702 cttacagtttgttctgataatacatgaagcacatcgtcatgaaaccacaacctgcaacgctcctcgatctcctctggtgatttctcacgaatgatttctc 5158801  T
Q  184 ttcccatatcccgtaacaaatcatgcattccaagt 218  Q
    |||||||||| || |||||||||||||||||||||    
T  5158802 ttcccatatctcgcaacaaatcatgcattccaagt 5158836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 5104094 - 5104207
Alignment:
Q  105 acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat 204  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||  | | || ||||||||| | |||||||||||||||||||||||| || |||||||    
T  5104094 acatgaagcacatcgtcatgaaaccacaacctgcaacgctcctcgagctcctctggtgatttctcacgaatgatttctcttcccatatctcgcaacaaat 5104193  T
Q  205 catgcattccaagt 218  Q
    ||||||||||||||    
T  5104194 catgcattccaagt 5104207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 5369245 - 5369127
Alignment:
Q  100 ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa 199  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||||  | |  | |||||||||   |||||||||||||||||||||||| || ||    
T  5369245 ataatacatgaagcacatcctcatgaaaccacaacctgcaacgctcctcgagctcttctggtgatttcccacgaatgatttctcttcccatatctcgcaa 5369146  T
Q  200 caaatcatgcattccaagt 218  Q
    |||||||||||||||||||    
T  5369145 caaatcatgcattccaagt 5369127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 5424538 - 5424420
Alignment:
Q  100 ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa 199  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||||  | |  | |||||||||   |||||||||||||||||||||||| || ||    
T  5424538 ataatacatgaagcacatcctcatgaaaccacaacctgcaacgctcctcgagctcttctggtgatttcccacgaatgatttctcttcccatatctcgcaa 5424439  T
Q  200 caaatcatgcattccaagt 218  Q
    |||||||||||||||||||    
T  5424438 caaatcatgcattccaagt 5424420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 5432178 - 5432075
Alignment:
Q  114 acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc 213  Q
    ||||||||| ||| ||| ||||||| | |||||||||||| ||||||||  || |||| |||||||||||||||||||||||| ||||||||||||||||    
T  5432178 acatcctcaggaagccacaacctgctatgctcctcaggatcctttggtggattattacaaatgatttctcttcccatatcccgcaacaaatcatgcattc 5432079  T
Q  214 caag 217  Q
    ||||    
T  5432078 caag 5432075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 5175637 - 5175534
Alignment:
Q  114 acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc 213  Q
    ||||||||| ||||||| ||||||| |||||||||||| | | || ||| ||| |||| |||||||||||||||||||||||| ||||||| ||||||||    
T  5175637 acatcctcaagaaaccacaacctgctacgctcctcaggctccattcgtggtttattacaaatgatttctcttcccatatcccgcaacaaattatgcattc 5175538  T
Q  214 caag 217  Q
    ||||    
T  5175537 caag 5175534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 5277464 - 5277361
Alignment:
Q  114 acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc 213  Q
    ||||||||| ||||||| ||||||| |||||||||||| | | || ||| ||| |||| |||||||||||||||||||||||| ||||||| ||||||||    
T  5277464 acatcctcaagaaaccacaacctgctacgctcctcaggctccattcgtggtttattacaaatgatttctcttcccatatcccgcaacaaattatgcattc 5277365  T
Q  214 caag 217  Q
    ||||    
T  5277364 caag 5277361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 5349162 - 5349042
Alignment:
Q  100 ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa 199  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||||  | |  | |||||||||   |||||||||||||||||||||||| || ||    
T  5349162 ataaaacatgaagcacatcctcctgaaaccagaacctgcaacgctcctcgagctcttctggtgatttcccacgaatgatttctcttcccatatctcgcaa 5349063  T
Q  200 caaatc--atgcattccaagt 218  Q
    ||||||  |||||||||||||    
T  5349062 caaatcatatgcattccaagt 5349042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 5068275 - 5068409
Alignment:
Q  84 cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc 183  Q
    |||||||||| |||  |||| || | |||| ||||||| |||||||| |||||||||||||||||  | |  | |||||||||   ||||| ||||||||    
T  5068275 cttacagtttgttctgataatacttgaagcgcatcctcctgaaaccacaacctgcaacgctcctcgagctcttctggtgatttcccacgaacgatttctc 5068374  T
Q  184 ttcccatatcccgtaacaaatcatgcattccaagt 218  Q
    |||||||||| || |||||||||||||||||||||    
T  5068375 ttcccatatctcgcaacaaatcatgcattccaagt 5068409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 218
Target Start/End: Complemental strand, 5342479 - 5342361
Alignment:
Q  100 ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa 199  Q
    |||| |||| |||||||||||| | ||| || ||||||| ||||||| || | | |||||||||||| | ||||| |||||||||||||||||| || |     
T  5342479 ataatacatcaagcacatcctccttaaagcacaacctgctacgctccccaagctcctttggtgatttctcacgaacgatttctcttcccatatctcgcag 5342380  T
Q  200 caaatcatgcattccaagt 218  Q
    |||||| ||||||||||||    
T  5342379 caaatcgtgcattccaagt 5342361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 5355833 - 5355946
Alignment:
Q  100 ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa 199  Q
    ||||||||| ||||||||| ||||||| ||| || |||| |||  ||||||| | ||  |||||||| | ||||| || ||||||||||||||| ||||     
T  5355833 ataaaacatcaagcacatcatcatgaagccacaatctgctacgtgcctcagggtcctccggtgatttctcacgaacgacttctcttcccatatctcgtag 5355932  T
Q  200 caaatcatgcattc 213  Q
    ||||||||||||||    
T  5355933 caaatcatgcattc 5355946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 5075009 - 5075065
Alignment:
Q  161 tgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattccaag 217  Q
    |||||||| |||||||||||||||||||||||| || | ||||||||||||||||||    
T  5075009 tgatttttcacgaatgatttctcttcccatatcacgcagcaaatcatgcattccaag 5075065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 5133127 - 5133239
Alignment:
Q  105 acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat 204  Q
    |||| |||||||||||| |||||||| |  |||||||||||||||     ||  ||||||| || |||||| ||||||||||||||||| |  |||||||    
T  5133127 acatcaagcacatcctcgtgaaaccacagtctgcaacgctcctcaaacacctccggtgattcttcacgaataatttctcttcccatatctctcaacaaat 5133226  T
Q  205 catgcattccaag 217  Q
    |||||||||||||    
T  5133227 catgcattccaag 5133239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 5183194 - 5183281
Alignment:
Q  125 aaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcatt 212  Q
    |||||| ||||||| |||||||||||| |  |||||||| || | ||||| |||||||||||||||||| | || |||||||||||||    
T  5183194 aaaccacaacctgctacgctcctcaggctcttttggtgacttctcacgaacgatttctcttcccatatctcttagcaaatcatgcatt 5183281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 5395844 - 5395710
Alignment:
Q  84 cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc 183  Q
    |||||||||| |||  |||| ||||  ||||| || | || |||||| ||||||| ||||||||| || |  |||||||| || | ||||| ||||||||    
T  5395844 cttacagtttgttctgataatacatccagcacgtcattattaaaccacaacctgctacgctcctcgggctcttttggtgacttctcacgaacgatttctc 5395745  T
Q  184 ttcccatatcccgtaacaaatcatgcattccaagt 218  Q
    |||||||||| | || ||||||||||||| |||||    
T  5395744 ttcccatatctcttagcaaatcatgcattgcaagt 5395710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 5691398 - 5691441
Alignment:
Q  170 acgaatgatttctcttcccatatcccgtaacaaatcatgcattc 213  Q
    ||||| |||||||||||||||||| || ||||||||||||||||    
T  5691398 acgaacgatttctcttcccatatctcgcaacaaatcatgcattc 5691441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 5261440 - 5261480
Alignment:
Q  177 atttctcttcccatatcccgtaacaaatcatgcattccaag 217  Q
    ||||||||||||||||| || |||||| |||||||||||||    
T  5261440 atttctcttcccatatctcgcaacaaaccatgcattccaag 5261480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 4334332 - 4334220
Alignment:
Q  105 acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat 204  Q
    |||| ||||||||||||||||||||| ||||| | ||| |||||||| | | |||||||||| | |||||||||||||||||||||||| || | |||||    
T  4334332 acatcaagcacatcctcatgaaaccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttctcttcccatatctcgaagcaaat 4334233  T
Q  205 catgcattccaag 217  Q
    ||||||| |||||    
T  4334232 catgcatgccaag 4334220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 4352009 - 4351897
Alignment:
Q  105 acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat 204  Q
    |||| |||||||||| | |||||||| ||||| | ||| |||||||| | |||||||||||| | |||||||||||||||||||||||| || | |||||    
T  4352009 acatcaagcacatccccgtgaaaccacaacctactacgttcctcaggctcctttggtgatttctcacgaatgatttctcttcccatatctcgcagcaaat 4351910  T
Q  205 catgcattccaag 217  Q
    ||||||| |||||    
T  4351909 catgcatgccaag 4351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 4125670 - 4125774
Alignment:
Q  113 cacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcatt 212  Q
    ||||||||||||| |||| ||||| | ||| |||||||| | | |||||||||| | |||||||||||||||||||||||| || | ||||||||||||     
T  4125670 cacatcctcatgataccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatg 4125769  T
Q  213 ccaag 217  Q
    |||||    
T  4125770 ccaag 4125774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 4322324 - 4322436
Alignment:
Q  105 acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat 204  Q
    |||| ||||||||| ||||||||||| ||||| | ||| |||||||| | | |||||||||| | |||||||||||| ||||||||||| || | |||||    
T  4322324 acatcaagcacatcatcatgaaaccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttcccttcccatatctcgcagcaaat 4322423  T
Q  205 catgcattccaag 217  Q
    ||||||| |||||    
T  4322424 catgcatgccaag 4322436  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 4359182 - 4359078
Alignment:
Q  113 cacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcatt 212  Q
    |||||||||||||||||| | ||| | | | |||||||| | |||||||||||| | |||||||||||||||||||||||| || | ||||||||||||     
T  4359182 cacatcctcatgaaaccacagcctactatgttcctcaggctcctttggtgatttctcacgaatgatttctcttcccatatctcggagcaaatcatgcatg 4359083  T
Q  213 ccaag 217  Q
    |||||    
T  4359082 ccaag 4359078  T

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Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 4135013 - 4135116
Alignment:
Q  114 acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc 213  Q
    ||||||||||||||||||||||| | ||||| |||  | | |||||||||||| |  || ||||| |||||||||||||| |||| ||||||||||||||    
T  4135013 acatcctcatgaaaccataacctactacgcttctcgagtttctttggtgatttctgtcggatgatctctcttcccatatctcgtagcaaatcatgcattc 4135112  T
Q  214 caag 217  Q
    ||||    
T  4135113 caag 4135116  T

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Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 4343742 - 4343609
Alignment:
Q  84 cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc 183  Q
    |||||||| | ||| || || |||| |||||| || ||||||||||| ||||| | | | |||||||| | |||||| ||||| | ||||||||||||||    
T  4343742 cttacagtatgttctaacaagacatcaagcacgtcttcatgaaaccacaacctactatgttcctcaggctcctttggcgatttctcacgaatgatttctc 4343643  T
Q  184 ttcccatatcccgtaacaaatcatgcattccaag 217  Q
    |||||||||| || | |||||||||||| |||||    
T  4343642 ttcccatatctcgcagcaaatcatgcatgccaag 4343609  T

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Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 8876578 - 8876471
Alignment:
Q  110 aagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgc 209  Q
    |||||||||||  | | |||| ||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||    ||||||||||||    
T  8876578 aagcacatccttgttataccacaacctgctacgctcctcaggatcctttggtgatttctcacgaatgatttctcttcccatatctgtcaacaaatcatgc 8876479  T
Q  210 attccaag 217  Q
    ||||||||    
T  8876478 attccaag 8876471  T

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Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 36215093 - 36215226
Alignment:
Q  84 cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc 183  Q
    |||||||||| |||  |||| |||| |  ||| |||| || |||||| ||||||| |||||||||| | | |||||||||||| | ||||||||| ||||    
T  36215093 cttacagtttgttctgataatacatcagccacgtccttattaaaccacaacctgctacgctcctcaagctcctttggtgatttctcacgaatgatctctc 36215192  T
Q  184 ttcccatatcccgtaacaaatcatgcattccaag 217  Q
    |||||||||| || | ||||||||||||||||||    
T  36215193 ttcccatatctcgcagcaaatcatgcattccaag 36215226  T

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Target: chr2 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 22585570 - 22585655
Alignment:
Q  132 aacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattccaag 217  Q
    ||||||| ||||| |||||||  |||||||||||  | | |||  ||| ||||||||||||| || | ||||||||||||||||||    
T  22585570 aacctgctacgcttctcaggactctttggtgattcctcaagaacaattcctcttcccatatctcgcagcaaatcatgcattccaag 22585655  T

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