View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5030-Insertion-9 (Length: 318)
Name: NF5030-Insertion-9
Description: NF5030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5030-Insertion-9 |
 | |
|
| [»] chr7 (18 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 8 - 318
Target Start/End: Complemental strand, 26302699 - 26302389
Alignment:
| Q |
8 |
cctctacactaattctattccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26302699 |
cctctacactaattctattccaaaactcgttctcttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctc |
26302600 |
T |
|
| Q |
108 |
agcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtga |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26302599 |
agcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtga |
26302500 |
T |
|
| Q |
208 |
tccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaaccttcttcatcat |
307 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
26302499 |
tccaatattagaagctgcggtgcccaattccatatgatatagccttttttgctttctttcatcctttcctcaaatacttgcaggaaaccttcttcatcct |
26302400 |
T |
|
| Q |
308 |
catctctatca |
318 |
Q |
| |
|
||| ||||||| |
|
|
| T |
26302399 |
catttctatca |
26302389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 27 - 317
Target Start/End: Complemental strand, 26204756 - 26204466
Alignment:
| Q |
27 |
ccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtg |
126 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||||||||||||||||||||| | |||||| |||| |||||| |||||||| || |||||||| |
|
|
| T |
26204756 |
ccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagcagcttctcattgtaaaattgttcagcaaatattggccatgtt |
26204657 |
T |
|
| Q |
127 |
atcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtg |
226 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26204656 |
atcattggcaaaccagaattcaagctttcaagaattgagttccaaccacagtgagtcacaattcctcctgttgcagggtgatccaatatcagaagctgtg |
26204557 |
T |
|
| Q |
227 |
gggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaaccttcttcatcatcatctctatc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||| |||||||| |||| |
|
|
| T |
26204556 |
gggcccaattccatatgatatagccctttttgctttctttcatccttttctcaaaatctatcagaaaaccttcttcaccatcatctttatc |
26204466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 27 - 317
Target Start/End: Complemental strand, 26224393 - 26224104
Alignment:
| Q |
27 |
ccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtg |
126 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||||||||||||||||||||| | |||||| |||| |||||| |||||||| || |||||||| |
|
|
| T |
26224393 |
ccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagcagcttctcattgtaaaattgttcagcaaatattggccatgtt |
26224294 |
T |
|
| Q |
127 |
atcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtg |
226 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26224293 |
atcattggcaaaccagaattcaagctttcaagaattgagttccaaccacagtgagtcacaattcctcctgttgcagggtgatccaatatcagaagctgtg |
26224194 |
T |
|
| Q |
227 |
gggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaaccttcttcatcatcatctctatc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||| |||||||| |||| |
|
|
| T |
26224193 |
gggcccaattccatatgatatagccctttttgctttctttcatccttttctcaaa-tctatcagaaaaccttcttcaccatcatctttatc |
26224104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 22 - 294
Target Start/End: Complemental strand, 26088658 - 26088386
Alignment:
| Q |
22 |
ctattccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggcc |
121 |
Q |
| |
|
|||||||| |||||||| ||||||| |||||| | || || |||||||||||||||||||| ||||| || |||| ||||||||||||||| || |||| |
|
|
| T |
26088658 |
ctattccagaactcgtttacttttgctccaactgggacccctatcttcaaaacatcaacaagcaacttttcattgtaaaattgctcagcaaatattggcc |
26088559 |
T |
|
| Q |
122 |
atgtgatcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaag |
221 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26088558 |
atgcgatcattggcaaaccagcattcaagctttcaagaatcgagttccaaccacagtgagtcacaatccctcctgttgcaggatgatccaatatcagaag |
26088459 |
T |
|
| Q |
222 |
ctgtggggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaa |
294 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
26088458 |
ttgtggtgcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaaatcttgaaggaaa |
26088386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 22 - 294
Target Start/End: Complemental strand, 26112446 - 26112174
Alignment:
| Q |
22 |
ctattccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggcc |
121 |
Q |
| |
|
|||||||| |||||||| ||||||| |||||| | || || |||||||||||||||||||| ||||| || |||| ||||||||||||||| || |||| |
|
|
| T |
26112446 |
ctattccagaactcgtttacttttgctccaactgggacccctatcttcaaaacatcaacaagcaacttttcattgtaaaattgctcagcaaatattggcc |
26112347 |
T |
|
| Q |
122 |
atgtgatcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaag |
221 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26112346 |
atgcgatcattggcaaaccagcattcaagctttcaagaatcgagttccaaccacagtgagtcacaatccctcctgttgcaggatgatccaatatcagaag |
26112247 |
T |
|
| Q |
222 |
ctgtggggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaa |
294 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
26112246 |
ttgtggtgcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaaatcttgaaggaaa |
26112174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 27 - 281
Target Start/End: Complemental strand, 26260743 - 26260489
Alignment:
| Q |
27 |
ccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtg |
126 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||| || ||||||| |
|
|
| T |
26260743 |
ccaaaacttgttcacttttgatccaactgaaactccaatcttcaaaacatcaacaagcaacttctcattgtaaaattgctcagcaaacattggccatgca |
26260644 |
T |
|
| Q |
127 |
atcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtg |
226 |
Q |
| |
|
|||||||||||||| | ||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
26260643 |
atcattggcaaacccgagttcaagctttcaagaattgagttccatccacagtgagtcacaatccctcctgttgcagggtgatccaatataaggagctgtg |
26260544 |
T |
|
| Q |
227 |
gggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaa |
281 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26260543 |
gtgcccaattccatatgatatagccctttttgctttctttcatcctttgctcaaa |
26260489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 64 - 318
Target Start/End: Complemental strand, 26179917 - 26179663
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||| | |||| ||||| ||||||| |
|
|
| T |
26179917 |
atcttcaaaacatcaacaagcaacttctcgttgtaaaattgctcagcaaacaccggccacgtgatcattggcaaacccgagttcacactttcaagaattg |
26179818 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26179817 |
agttccaaccacagtgagtcacaatccctcctgttgcagggtgatctaatatcagaagttgtgatgcccaattccatatgatatagccctttttgctttc |
26179718 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttgcaggaaaccttcttcatcatcatctctatca |
318 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||| |
|
|
| T |
26179717 |
tttcaacctttcctcaaattcttgcaggaaaccttctccatcttcatctttatca |
26179663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 64 - 294
Target Start/End: Complemental strand, 26156022 - 26155792
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
|||||||||||||||||||| ||||| || |||| |||||| ||| |||| || |||||||| |||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
26156022 |
atcttcaaaacatcaacaagcaacttttcattgtaaaattgatcaccaaacattggccatgtaatcattggcaaaccagaattcaagctttcgagagttg |
26155923 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
26155922 |
agttccaaccacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggtgcccaattccatatgatatatccctttttgctttc |
26155823 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttgcaggaaa |
294 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| |
|
|
| T |
26155822 |
tttcatcctttcctcaaaatcttgaaggaaa |
26155792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 64 - 318
Target Start/End: Complemental strand, 26298282 - 26298028
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
||||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26298282 |
atctttaaaacatcaacaagcaacttctcattgtaaaattgctcagcaaaaataggccatgtgatcattggcaaaccagcattcaagctttcgagagttg |
26298183 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||| || || ||||| | |||||||||||||||||| ||||||| |
|
|
| T |
26298182 |
agttccaaccacaatgagtcacaattcctcctgttgcagggtggtccaatatcagaagttgcggtgcccagtcccatatgatatagcccttgctgctttc |
26298083 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttgcaggaaaccttcttcatcatcatctctatca |
318 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||||| |||| |||||| ||||| |
|
|
| T |
26298082 |
tttaatcctttcctcaaattcttgcagaaaaccttctccatcctcatctgtatca |
26298028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 64 - 295
Target Start/End: Complemental strand, 26192099 - 26191868
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||| ||||||||| ||||| || ||||| | |||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
26192099 |
atcttcaaaacatcaacaagcaacttctcattgtaaaattgctcggcaaacattggccacgcgatcattggcaaaccagcattcaagctttcaagaatcg |
26192000 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
||||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26191999 |
agttccaaccacagtgagtcacaattccacctgttgcagggtgatccaatatctgaagctgtggtgcccaattccatatgatatagccctttttgctttc |
26191900 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttgcaggaaac |
295 |
Q |
| |
|
|||||||||| ||||||| ||||| ||||||| |
|
|
| T |
26191899 |
tttcatccttccctcaaaatcttgtaggaaac |
26191868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 64 - 318
Target Start/End: Complemental strand, 26251682 - 26251428
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
||||||||||||||||| || |||||||| |||| ||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||| ||| |
|
|
| T |
26251682 |
atcttcaaaacatcaactagcaacttctcattgtaaaattgctcagcaaacactggccacgtgatcattggcaaaccagcatttaagctttcaagagttg |
26251583 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||| |
|
|
| T |
26251582 |
agttccaaccacaatgagtcacaattcctcctgttgcagggtgatccaatatcagaagttgtggtgcccaattccagatgatatagcccttgttgctttc |
26251483 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttgcaggaaaccttcttcatcatcatctctatca |
318 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||| |||| |||||| ||||| |
|
|
| T |
26251482 |
tttcatcctttcctcaaatttttgcaaaaaaccttctccatcctcatctttatca |
26251428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 64 - 287
Target Start/End: Original strand, 19102860 - 19103083
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
|||||||||||||| || || ||||| || |||| ||| |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
19102860 |
atcttcaaaacatcgacgagcaacttttcattgtaaaactgctcagcaaaaattggccatgtgatcattggcaaacccgaattcaagctttcgagaattg |
19102959 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
19102960 |
agttccaaccacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagttgcggtgcccaattccatatgatatatccctttttgctttc |
19103059 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttg |
287 |
Q |
| |
|
|||||||||| ||||||| ||||| |
|
|
| T |
19103060 |
tttcatccttgcctcaaaatcttg |
19103083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 64 - 294
Target Start/End: Complemental strand, 26187082 - 26186853
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||| ||||||||| || | || ||||||||||||||||||||||| | |||| |||||| ||||||| |
|
|
| T |
26187082 |
atcttcaaaacatcaacaagcaacttctcattgtaaaattgctcctcagacattggccatgtgatcattggcaaacccgagttcacgctttccagaattg |
26186983 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
26186982 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggtgcccaattccatatgatatatccctttttgctttc |
26186883 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttgcaggaaa |
294 |
Q |
| |
|
|||||| |||| |||||| ||||| |||||| |
|
|
| T |
26186882 |
tttcattcttt-ctcaaaatcttgtaggaaa |
26186853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 64 - 318
Target Start/End: Complemental strand, 26243234 - 26242980
Alignment:
| Q |
64 |
atcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattg |
163 |
Q |
| |
|
||||| |||||||||||||| |||||||| |||| ||||||||||| | | | ||||| || |||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
26243234 |
atctttaaaacatcaacaagcaacttctcattgtaaaattgctcagaagacactggccacgtaatcattggcaaaccagaattcaagctttcaagaattg |
26243135 |
T |
|
| Q |
164 |
agttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttc |
263 |
Q |
| |
|
||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||| || || ||||| | |||||||||||||||||| |||||||| |
|
|
| T |
26243134 |
agttccaaccacagtgagtcacaattcctcttgttgctgggtgatccaatatcagaagttgcggtgcccagtcccatatgatatagcccttgttgctttc |
26243035 |
T |
|
| Q |
264 |
tttcatcctttcctcaaattcttgcaggaaaccttcttcatcatcatctctatca |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| ||| || ||||| |
|
|
| T |
26243034 |
tttcatcctttcctcaaattcttgcaggaaaccttctccatcctcaactttatca |
26242980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 312
Target Start/End: Complemental strand, 26278586 - 26278282
Alignment:
| Q |
8 |
cctctacactaattctattccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctc |
107 |
Q |
| |
|
||||||||||||| || |||| |||| ||| ||||||| |||||| | || || |||||||||||||||||||| |||||||| |||| ||||| ||| |
|
|
| T |
26278586 |
cctctacactaatgttagtccataacttgtttacttttgctccaactgggacccctatcttcaaaacatcaacaagcaacttctcattgtaaaattcctc |
26278487 |
T |
|
| Q |
108 |
agcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtga |
207 |
Q |
| |
|
||||| | ||||| ||||||||||||||||||||||| | |||||| ||| |||||||||||| ||| ||||||||||||||||| ||||||||| |
|
|
| T |
26278486 |
ggcaaacactggccacgtgatcattggcaaaccagcatttacgctttcaagagttgagttccaaccacaatgagtcacaatccctccgattgcagggtat |
26278387 |
T |
|
| Q |
208 |
tccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaaccttcttcatcat |
307 |
Q |
| |
|
||||||||||| || ||||| ||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| | |
|
|
| T |
26278386 |
tccaatatcagcagttgtggtgcccaatcccatatgatgtagcccttgttgctttctttcatccttttctcaaattcttgcaggaaaccttctccatcct |
26278287 |
T |
|
| Q |
308 |
catct |
312 |
Q |
| |
|
||||| |
|
|
| T |
26278286 |
catct |
26278282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 41 - 294
Target Start/End: Complemental strand, 26129424 - 26129171
Alignment:
| Q |
41 |
cttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaacc |
140 |
Q |
| |
|
|||||| ||| || ||||| || ||||||||||||||||| || ||||| || |||| |||||| || |||| | |||||||| |||||||||||||| |
|
|
| T |
26129424 |
cttttgctcctactgaaacccctatcttcaaaacatcaacgagcaacttttcattgtaaaattgatcgccaaaccttggccatgtaatcattggcaaacc |
26129325 |
T |
|
| Q |
141 |
agcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaattccat |
240 |
Q |
| |
|
|||||| |||||||||||| |||||||||||| ||| ||||||||||| |||||| | ||||||||||||||||| || |||||||| |||||||||||| |
|
|
| T |
26129324 |
agcatttaagctttcgagagttgagttccaaccacaatgagtcacaattcctcctatggcagggtgatccaatataaggagctgtggtgcccaattccat |
26129225 |
T |
|
| Q |
241 |
atgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaa |
294 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
26129224 |
atgatatagcccttttttctttctttcatcctttcctcaaaatcttgaaggaaa |
26129171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 27 - 303
Target Start/End: Complemental strand, 26208282 - 26208006
Alignment:
| Q |
27 |
ccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtg |
126 |
Q |
| |
|
|||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||| ||||||||||||||| || ||||||| |
|
|
| T |
26208282 |
ccaaaatttgttcacttttgatccaactgaaactccaatcttcaaaacatcaacaagcaatttctcattgtaaaattgctcagcaaacattggccatgca |
26208183 |
T |
|
| Q |
127 |
atcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtg |
226 |
Q |
| |
|
||||| || |||||| || | | |||||| |||||||| ||||||| ||| |||||||| |||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
26208182 |
atcatgggtaaaccaacactaaggctttcaagaattgaattccaaccacaatgagtcactatccctcctgttgcagggtggcctaatatgagaagctgtg |
26208083 |
T |
|
| Q |
227 |
gggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaaccttcttca |
303 |
Q |
| |
|
| |||||||||||||||||||| ||||||||| ||||||||||||||| || ||| |||| || ||||| |||||| |
|
|
| T |
26208082 |
gtgcccaattccatatgatatatccctttttgttttctttcatcctttgcttaaaatcttcaagaaaaccatcttca |
26208006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 36 - 274
Target Start/End: Complemental strand, 26227834 - 26227596
Alignment:
| Q |
36 |
gttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggc |
135 |
Q |
| |
|
|||||||||||||||||| |||||| | |||||||||||| |||||||| |||||| |||| ||| ||||| ||||| || |||||||| || |||||| |
|
|
| T |
26227834 |
gttcacttttgatccaaccgaaactactatcttcaaaacaaaaacaagaagcttctcattgtaaaactgctccgcaaacattggccatgtaataattggc |
26227735 |
T |
|
| Q |
136 |
aaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtgatccaatatcagaagctgtggggcccaat |
235 |
Q |
| |
|
|||| | || |||||||||| |||||||||||||||| ||| |||||||| | |||| |||||||||||||| | ||||| ||||| ||||| ||||||| |
|
|
| T |
26227734 |
aaactaacactcaagctttcaagaattgagttccaaccacaatgagtcactacccctgctgttgcagggtgacctaatatgagaagttgtggtgcccaat |
26227635 |
T |
|
| Q |
236 |
tccatatgatatagccctttttgctttctttcatccttt |
274 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
26227634 |
tccatatgatatatccctttttgttttctttcatccttt |
26227596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 8 - 299
Target Start/End: Complemental strand, 44904143 - 44903852
Alignment:
| Q |
8 |
cctctacactaattctattccaaaactcgttcacttttgatccaacagaaactccaatcttcaaaacatcaacaagaaacttctcgttgttaaattgctc |
107 |
Q |
| |
|
|||||||| ||| |||||||| |||| ||| |||||| |||||| | || || |||||||||||||||||||| ||| |||| |||| |||||| || |
|
|
| T |
44904143 |
cctctacagtaaagctattccataacttgttttcttttgctccaactgggacccctatcttcaaaacatcaacaagcaacctctcattgtaaaattgttc |
44904044 |
T |
|
| Q |
108 |
agcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttcgagaattgagttccaacaacagtgagtcacaatccctcctgttgcagggtga |
207 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| || | | |||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
44904043 |
agcaaacattggccatgtgatcattggcaaaccaacactaatgctttcaagagttgagttccaaccacagtgagtcacaattcctcctgttgcagggtga |
44903944 |
T |
|
| Q |
208 |
tccaatatcagaagctgtggggcccaattccatatgatatagccctttttgctttctttcatcctttcctcaaattcttgcaggaaaccttc |
299 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
44903943 |
tccaatatgagaagctgcggtgcccaattccatatgatatagcccttgttgctttctttcaccctttcctcaaaatcttgcaggaaaccttc |
44903852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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