View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5031-Insertion-9 (Length: 240)
Name: NF5031-Insertion-9
Description: NF5031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5031-Insertion-9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 35981861 - 35982094
Alignment:
| Q |
8 |
catagtcatacctatagtgaattagttagtaatccattcatttcatttatctgcggtgacagagaagtttcttnnnnnnn-ttattataacagctagaaa |
106 |
Q |
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| T |
35981861 |
catagtcatacctatagtgaattagttagtaatccattcatttcatttatctgcggtgacacagaagtttcttaaaaaaaattattataacagctagaaa |
35981960 |
T |
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| Q |
107 |
aacttcatttgattgttacaataatgctgcgaatttaaaccagcttgtaagtcgaggattgacgaaagtttataagctatattcagaaaatatctccaag |
206 |
Q |
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| T |
35981961 |
attttcatttgattgttacaataatgctgcgaatttaaaccagcttgtaagtcgaggattgacgaaagtttataagctatatttagaaaatatctccaag |
35982060 |
T |
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| Q |
207 |
actctaaccaatattatgcaaaaactgcacacag |
240 |
Q |
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| T |
35982061 |
actctaaccaatattatgcaaaaactgcacacag |
35982094 |
T |
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