View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5031_low_8 (Length: 282)
Name: NF5031_low_8
Description: NF5031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5031_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 3 - 263
Target Start/End: Complemental strand, 52804051 - 52803791
Alignment:
| Q |
3 |
agctggtttagaaaatccaacattaatgttaattctaaattactgttaaacaacatcatggtaattgctaagcatgctcaacactcaacaaaagcataca |
102 |
Q |
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| T |
52804051 |
agctggtttagaaaatccaacattaatgttaattctaaattactgttaaacaacatcatggtaattgctaagcatcctcaacactcaacaaaagcataca |
52803952 |
T |
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| Q |
103 |
tcacatcgtatcatatcatatctctggagtacagttaacatttaatgatcagttatgatttaaatcatacattacattacatgcgttttgatcgaagata |
202 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
52803951 |
tcacatcgtatcatatcatatctctggagtacggttaacatttaatgatcagttatgatttaaatcatacattacattacatgcattttgatcgaagata |
52803852 |
T |
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| Q |
203 |
tttaagatgatcatgtttatataaagatacatacaattaactgaaaacagaatgagattga |
263 |
Q |
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| T |
52803851 |
tttaagatgatcatgtttatataaagatacatacaattaactgaaaacagaatgagattga |
52803791 |
T |
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