View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5034-Insertion-2 (Length: 930)
Name: NF5034-Insertion-2
Description: NF5034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5034-Insertion-2 |
 | |
|
| [»] chr7 (7 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 833; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 833; E-Value: 0
Query Start/End: Original strand, 8 - 930
Target Start/End: Original strand, 45273922 - 45274847
Alignment:
| Q |
8 |
aataccagtattcaaattcatcgtgtctgatccgtctgcggtaattgtgttgaattgccctttgccaggctttctgacaatgatcgtagagtgttggatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
45273922 |
aataccagtattcaaattcatcgtgtctgatccgtctgcggtaattgtgttgaattgccctttgccaggctttcttacaatgattgtagagtgttggatc |
45274021 |
T |
|
| Q |
108 |
aaggtagcagatgatccaaagatgaagtcaacggt-accagagacaagacaattgcggtagtactgtctgttgctttgaacatacaagctgtcttggtaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
45274022 |
aaggtagcagatgatccaaagatgaagtcaacggttaccagagacaagacaattgcggtagtactgcctgttgctttgaacatacaagctgtcttggtaa |
45274121 |
T |
|
| Q |
207 |
cccaggatatggcaacccaccaaagcagacatatctcctacgtttctaaatgccacggcttggtgaccatcaggaccggctgtgttctcaaatgtcattg |
306 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45274122 |
cccacgatatggcaacccaccaaagcagacatatctcctacgtttctaaatgccacagcttggtgaccatcaggaccggctgtgttctcaaatgtcattg |
45274221 |
T |
|
| Q |
307 |
cctttccaatgaaccctattgcggtgttggctgcacgcatggataatcaattaattagtaatttcaatcacactggctatatatgtcaatgttatatgta |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
45274222 |
cctttccaatgaaccctattgcggtgttggctgcacgcatggataatcaattaattagtaatttcgatcacactggctatatatgtcaatgttatatgta |
45274321 |
T |
|
| Q |
407 |
tatatttctcttttcaatgtgagttatgttttcttcaaaaataaattttgagagtgatgctactttttcttatatactctttcttcaatcataaggtaca |
506 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
45274322 |
tatatttctcttttcaatgcgagttatgttttcttcaaaaataaattttgagagtgatgctactttttcttatatactctttcttcaatcataaggtata |
45274421 |
T |
|
| Q |
507 |
caattaatcaaataaaatnnnnnnngctttgatagataataattgaattacgtaccgaaggtggcggtttgcatggtcttggtaccggcagcaaagttct |
606 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45274422 |
caattaatcaaataaaataaaaaaagctttgatagataataattgaattacgtaccgaaggtggcggtttgcatggtcttggtaccggcagcaaagttct |
45274521 |
T |
|
| Q |
607 |
ttctaccggtgacaatggtccttgcagggccatcaccatacataagaatgttaacagcatccttgggaacagtgatgtattcgtcatagacaccagcctt |
706 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
45274522 |
ttctaccggtgacaatggtccttgcagggccatcaccatacataagaatgttaacagcatccttgggtacagtgatgtattcgtcatagacaccagcctt |
45274621 |
T |
|
| Q |
707 |
aacgtagataaaatacctgcctttgtttcccttaggataagaggcaagagcagcctggattgttttaaattggccgctaccatcattggcaacaacagca |
806 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45274622 |
aacgtagataaaatacctgcctttgtttcccttaggataagaggcaagagcagcctggatggttttaaattggccgctaccatcattggcaacaacagca |
45274721 |
T |
|
| Q |
807 |
ttaggcctaatatttgctctccaattttttcgttgcattttagcc-aaagcttgcgatcagaagcagagatccatgaagggtgtccttgatcatc-acag |
904 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || |||| |
|
|
| T |
45274722 |
ttaggcctaatatttgctctccaattttttcgttgcattttagccaaaagcttgcgatcagaagcagagatccatgaagggtatccttgatcgtcaacag |
45274821 |
T |
|
| Q |
905 |
tcacctcagaattaagaagacgacgg |
930 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
45274822 |
tcacctcagaattaagaagacgacgg |
45274847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 695; E-Value: 0
Query Start/End: Original strand, 8 - 930
Target Start/End: Original strand, 45282166 - 45283088
Alignment:
| Q |
8 |
aataccagtattcaaattcatcgtgtctgatccgtctgcggtaattgtgttgaattgccctttgccaggctttctgacaatgatcgtagagtgttggatc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
45282166 |
aataccagtattcaaattcatcgtgtctgatccgtctgcagtaattgtgttgaattgccctttgccaggctttcttacaatgattgtagagtgttggatc |
45282265 |
T |
|
| Q |
108 |
aaggtagcagatgatccaaagatgaagtcaacggtaccagagacaagacaattgcggtagtactgtctgttgctttgaacatacaagctgtcttggtaac |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45282266 |
aaggtagcagatgatccaaagatgaagtcaacggtacccgagacaagacaattgcggtagtactgtctgttgctttgaacatacaagctgtcttggtaac |
45282365 |
T |
|
| Q |
208 |
ccaggatatggcaacccaccaaagcagacatatctcctacgtttctaaatgccacggcttggtgaccatcaggaccggctgtgttctcaaatgtcattgc |
307 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45282366 |
ccacgatatggcaacccaccaaagcagacatatctccttggtttctaaatgccacagcttggtgaccatcaggaccggctgtgttctcaaatgtcattgc |
45282465 |
T |
|
| Q |
308 |
ctttccaatgaaccctattgcggtgttggctgcacgcatggataatcaattaattagtaatttcaatcacactggctatatatgtcaatgttatatgtat |
407 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| | |
|
|
| T |
45282466 |
ctttccaatgaaccccattgcggtgttggctgcattcatggataatcaattaattagtaatttcgatcacattggctatatatgtcaatgttatatgtgt |
45282565 |
T |
|
| Q |
408 |
atatttctcttttcaatgtgagttatgttttcttcaaaaataaattttgagagtgatgctactttttcttatatactctttcttcaatcataaggtacac |
507 |
Q |
| |
|
|| | | |||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||| ||| | |
|
|
| T |
45282566 |
atctatatcttttcaatgttagttatgttttcttcaaaaatgaattttgagagtgatgccactttttctcatatactctttcttcattcataa-gtaaat |
45282664 |
T |
|
| Q |
508 |
aattaatcaaataaaatnnnnnnngctttgatagataataattgaattacgtaccgaaggtggcggtttgcatggtcttggtaccggcagcaaagttctt |
607 |
Q |
| |
|
||||||| ||||||||| | |||||| ||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| |||| |
|
|
| T |
45282665 |
aattaattaaataaaat-aaaaaagttttgatcgatgataattgaattaagtaccgaaggtggcggtttgcatggtcttgacaccagcagcaaagctctt |
45282763 |
T |
|
| Q |
608 |
tctaccggtgacaatggtccttgcagggccatcaccatacataagaatgttaacagcatccttgggaacagtgatgtattcgtcatagacaccagcctta |
707 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
45282764 |
tctaccagtgacaatggtccttgcagggccatcaccatacataagaatgttaacagcatccttggggacagtgatgtattcgtcatagacaccggcctta |
45282863 |
T |
|
| Q |
708 |
acgtagataaaatacctgcctttgtttcccttaggataagaggcaagagcagcctggattgttttaaattggccgctaccatcattggcaacaacagcat |
807 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
45282864 |
acgtagataacatatctgcctttgtttcccttagggtaagaggcaagagcagcctggatggttttaaattggccgctaccatccttggcaacaacagcat |
45282963 |
T |
|
| Q |
808 |
taggcctaatatttgctctccaattttttcgttgcattttagcc-aaagcttgcgatcagaagcagagatccatgaagggtgtccttgatcatc-acagt |
905 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| || ||||| |
|
|
| T |
45282964 |
taggcataatatttgctctccaattttttcgttgcattttagccaaaagcttgcgatcagaagaagagatccatgaagggtatccttgatcgtcaacagt |
45283063 |
T |
|
| Q |
906 |
cacctcagaattaagaagacgacgg |
930 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
45283064 |
cacctcagaattaagaagacgacgg |
45283088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 78 - 930
Target Start/End: Original strand, 45270466 - 45271314
Alignment:
| Q |
78 |
tttctgacaatgatcgtagagtgttggatcaaggtagcagatgatccaaagatgaagtcaacggtaccagagacaagacaattgcggtagtactgtctgt |
177 |
Q |
| |
|
||||| || ||||| |||||| |||||||||||| ||||||| ||||||||||||||||| |||||| |||| || ||| ||||||||| | || |||| |
|
|
| T |
45270466 |
tttctcacgatgatggtagagctttggatcaaggtggcagatgttccaaagatgaagtcaatggtaccggagataacacagttgcggtagaattgcctgt |
45270565 |
T |
|
| Q |
178 |
tgctttgaacatacaagctgtcttggtaacccaggatatggcaacccaccaaagcagacatatctcctacgtttctaaatgccacggcttggtgaccatc |
277 |
Q |
| |
|
|| ||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| | |
|
|
| T |
45270566 |
tggtttgaacgtacaaagtgtcttggtaacctacgatatggcaacccaccaaagcagacatatctcctatgtttctaaatgccacagcttgcataccggc |
45270665 |
T |
|
| Q |
278 |
aggaccggctgtgttctcaaatgtcattgcctttccaatgaaccctattgcggtgttggctgcacgcatggataatcaattaattagtaatttcaatcac |
377 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| ||| || || |
|
|
| T |
45270666 |
aggaccggctgtgttctcaaatgtcattgcctttccaatgaaccccattgcggtgttggctgcatgcatggatgatcaattaattagtaacttctataac |
45270765 |
T |
|
| Q |
378 |
actggctatatatgtcaatgttatatgtatatatttctcttttcaatgtgagtta-tgttttcttcaaaaataaattttgagagtgatgctactttttct |
476 |
Q |
| |
|
|| |||||||||| | |||| | ||||||| | |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
45270766 |
accggctatatatatgtatgtg---tctatatatatatcttttcaatgtgagttaatgtttttttcaaaaatgaattttgagagtgatgctactatttca |
45270862 |
T |
|
| Q |
477 |
tatatactctttcttcaatcataaggtacacaattaatcaaataaaatnnnnnnngctttgatagataataattgaattacgtaccgaaggtggcggttt |
576 |
Q |
| |
|
|| |||||| |||||| |||||||||||||||||||| ||||||||| |||||||| |||| ||| |||||||||||| |||||||| || | |
|
|
| T |
45270863 |
catctactctctcttcattcataaggtacacaattaattaaataaaataaaa---gctttgatcgata-taactgaattacgtacaaaaggtggcagtgt |
45270958 |
T |
|
| Q |
577 |
gcatggtcttggtaccggcagcaaagttctttctaccggtgacaatggtccttgcagggccatcaccatacataagaatgttaacagcatccttgggaac |
676 |
Q |
| |
|
| || ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
45270959 |
tctgtgtgttggtaccggccatttggttctttctaccagtgacaatggtctttgcagggccatcaccatacataagaatgttaacagcctccttggggac |
45271058 |
T |
|
| Q |
677 |
agtgatgtattcgtcatagacaccagccttaacgtagataaaatacctgcctttgtttcccttaggataagaggcaagagcagcctggattgttttaaat |
776 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
45271059 |
agtgatgtattcgtcatagacaccggccttaacgtagataacatatctgtctttgtttcccttagggtaagaggcaagagcagcctggatggttttaaat |
45271158 |
T |
|
| Q |
777 |
tggccgctaccatcattggcaacaacagcattaggcctaatatttgctctccaattttttcgttgcattttagcc-aaagcttgcgatcagaagcagaga |
875 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||| ||||| |
|
|
| T |
45271159 |
tggccgctaccatcattggcaacaacagcattaggcctaatatttgctctccatccttttcgttgcattttagccaaaagcttgcgaccagaagaagaga |
45271258 |
T |
|
| Q |
876 |
tccatgaagggtgtccttgatcatc-acagtcacctcagaattaagaagacgacgg |
930 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
45271259 |
tccatgaagggtatccttgatcgtcaacagtcacctcagaattaagaagacgacgg |
45271314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 415 - 930
Target Start/End: Original strand, 45293958 - 45294476
Alignment:
| Q |
415 |
tcttttcaatgtgagttatgttttcttcaaaaataaattttgagagtgatgctactttttcttata--tactctttcttcaatcataaggtacacaatta |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||| ||||||||| ||||||||||||||||| |
|
|
| T |
45293958 |
tcttttcaatgtgagttatgttttcttcaaaaatgaattttgagagtgatgttactatttctcatcattaccctttcttcattcataaggtacacaattt |
45294057 |
T |
|
| Q |
513 |
atcaaataaaatnnnnnnngctttgatagataataattgaattacgtaccgaaggtggcggtttgcatggtcttggtaccggcagcaaagttctttctac |
612 |
Q |
| |
|
|| ||||||||| | | |||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||| | |
|
|
| T |
45294058 |
attaaataaaataaaaaa-gttgtgatcgatgataattgaattacttaccgaaggtggcggtttgcatggtcttgacaccagcagcaccgttctttcttc |
45294156 |
T |
|
| Q |
613 |
cggtgacaatggtccttgcagggccatcaccatacataagaatgttaacagcatccttgggaacagtgatgtattcgtcatagacaccagccttaacgta |
712 |
Q |
| |
|
|||| ||||||||| || | |||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
45294157 |
cggtaacaatggtctttccggggccatcaccatacataagaatgttaacagcgtctttgggaatagtgatgtattcatcatagacgccagccttaacgta |
45294256 |
T |
|
| Q |
713 |
gataaaatacctgcctttgtttcccttaggataagaggcaagagcagcctggattgttttaaattggccgctaccatcattggcaacaacagcattaggc |
812 |
Q |
| |
|
|||| ||| ||||||||||| |||||||| |||| ||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| | |
|
|
| T |
45294257 |
gatagtatatctgcctttgttccccttagggtaagcggcaatagcagcctggatggttttaaattgaccgctaccatccttggcaacaacagcattagcc |
45294356 |
T |
|
| Q |
813 |
ctaatatttgctctccaattttttcgttgcattttagcc-aaagcttgcgatcagaagcagagatccatgaagggtgtccttgatcatc-acagtcacct |
910 |
Q |
| |
|
| || |||||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
45294357 |
ccaacatttgctctccatccgtttcctttcattttagccaaaagcttgcgatcagaagcagagatccatgaagggtatccttgatcatcaacagtcacct |
45294456 |
T |
|
| Q |
911 |
cagaattaagaagacgacgg |
930 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
45294457 |
cagaattaagaagacgacgg |
45294476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 415 - 930
Target Start/End: Original strand, 45302918 - 45303436
Alignment:
| Q |
415 |
tcttttcaatgtgagttatgttttcttcaaaaataaattttgagagtgatgctactttttcttata--tactctttcttcaatcataaggtacacaatta |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| || ||| ||||||||| ||||||||||||||||| |
|
|
| T |
45302918 |
tcttttcaatgtgagttatgttttcttcaaaaatgaattttgagagtgatgttactatttctcatcattaccctttcttcattcataaggtacacaattt |
45303017 |
T |
|
| Q |
513 |
atcaaataaaatnnnnnnngctttgatagataataattgaattacgtaccgaaggtggcggtttgcatggtcttggtaccggcagcaaagttctttctac |
612 |
Q |
| |
|
|| ||||||||| | | |||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||| | |
|
|
| T |
45303018 |
attaaataaaataaaaaa-gttgtgatcgatgataattgaattacttaccgaaggtggcggtttgcatggtcttgacaccagcagcaccgttctttcttc |
45303116 |
T |
|
| Q |
613 |
cggtgacaatggtccttgcagggccatcaccatacataagaatgttaacagcatccttgggaacagtgatgtattcgtcatagacaccagccttaacgta |
712 |
Q |
| |
|
|||| ||||||||| || | |||||||||||||||||||||||||||||||| || ||||||| |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
45303117 |
cggtaacaatggtctttccggggccatcaccatacataagaatgttaacagcgtctttgggaatagtgatgtattcatcatagacgccagccttaacgta |
45303216 |
T |
|
| Q |
713 |
gataaaatacctgcctttgtttcccttaggataagaggcaagagcagcctggattgttttaaattggccgctaccatcattggcaacaacagcattaggc |
812 |
Q |
| |
|
|||| ||| ||||||||||| |||||||| |||| ||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| | |
|
|
| T |
45303217 |
gatagtatatctgcctttgttccccttagggtaagcggcaatagcagcctggatggttttaaattgaccgctaccatccttggcaacaacagcattagcc |
45303316 |
T |
|
| Q |
813 |
ctaatatttgctctccaattttttcgttgcattttagcc-aaagcttgcgatcagaagcagagatccatgaagggtgtccttgatcatc-acagtcacct |
910 |
Q |
| |
|
| || |||||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
45303317 |
ccaacatttgctctccatccgtttcctttcattttagccaaaagcttgcgatcagaagcagagatccatgaagggtatccttgatcatcaacagtcacct |
45303416 |
T |
|
| Q |
911 |
cagaattaagaagacgacgg |
930 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
45303417 |
cagaattaagaagacgacgg |
45303436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 403
Target Start/End: Original strand, 45293506 - 45293904
Alignment:
| Q |
8 |
aataccagtattcaaattcatcgtgtctgatccgtctgcggtaattgtgttgaattgccctttgccaggctttctgacaatgatcgtagagtgttggatc |
107 |
Q |
| |
|
||||||||||||||| || || || ||| |||||||||||||||||||||||||| | | |||| |||| || ||||||||||||| ||||||| |
|
|
| T |
45293506 |
aataccagtattcaatttattcacgtatgacccgtctgcggtaattgtgttgaattgatttggggaaggcattcttacgatgatcgtagagtcttggatc |
45293605 |
T |
|
| Q |
108 |
aaggtagcagatgatccaaagatgaagtcaacggtaccagagacaagacaattgcggtagtactgtctgttgctttgaacatacaagctgtcttggtaac |
207 |
Q |
| |
|
||||| ||||||| |||||||||||| |||||||||||||||| || ||||||||||||| | || |||||| ||||||| ||||| |||||||||||| |
|
|
| T |
45293606 |
aaggtggcagatgttccaaagatgaaatcaacggtaccagagataacacaattgcggtagaattgcctgttggtttgaacgtacaaagtgtcttggtaac |
45293705 |
T |
|
| Q |
208 |
ccaggatatggcaacccaccaaagcagacatatctcctacgtttctaaatgccacggcttggtgaccatcaggaccggctgtgttctcaaatgtcattgc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
45293706 |
ccaggatatggcaacccaccaaagcagacatatctccttggtttctaaatgccacagcttggtgaccagcaggaccggctgtgttctcaaatgtcattgc |
45293805 |
T |
|
| Q |
308 |
ctttccaatgaaccctattgcggtgttggctgcacgcatggataatcaattaattagtaatttcaatcacactggc---tatatatgtcaatgttatat |
403 |
Q |
| |
|
||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||||| ||| ||||||| ||| ||||| |||||||||||||| |
|
|
| T |
45293806 |
ctttccaatgaaccccaatgcggtgttggctgcatgcatggatgatcaattaattagtaacttcgatcacaccggctattatatgtgtcaatgttatat |
45293904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 403
Target Start/End: Original strand, 45302466 - 45302864
Alignment:
| Q |
8 |
aataccagtattcaaattcatcgtgtctgatccgtctgcggtaattgtgttgaattgccctttgccaggctttctgacaatgatcgtagagtgttggatc |
107 |
Q |
| |
|
||||||||||||||| || || || ||| |||||||||||||||||||||||||| | | |||| |||| || ||||||||||||| ||||||| |
|
|
| T |
45302466 |
aataccagtattcaatttattcacgtatgacccgtctgcggtaattgtgttgaattgatttggggaaggcattcttacgatgatcgtagagtcttggatc |
45302565 |
T |
|
| Q |
108 |
aaggtagcagatgatccaaagatgaagtcaacggtaccagagacaagacaattgcggtagtactgtctgttgctttgaacatacaagctgtcttggtaac |
207 |
Q |
| |
|
||||| ||||||| |||||||||||| |||||||||||||||| || ||||||||||||| | || |||||| ||||||| ||||| |||||||||||| |
|
|
| T |
45302566 |
aaggtggcagatgttccaaagatgaaatcaacggtaccagagataacacaattgcggtagaattgcctgttggtttgaacgtacaaagtgtcttggtaac |
45302665 |
T |
|
| Q |
208 |
ccaggatatggcaacccaccaaagcagacatatctcctacgtttctaaatgccacggcttggtgaccatcaggaccggctgtgttctcaaatgtcattgc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
45302666 |
ccaggatatggcaacccaccaaagcagacatatctccttggtttctaaatgccacagcttggtgaccagcaggaccggctgtgttctcaaatgtcattgc |
45302765 |
T |
|
| Q |
308 |
ctttccaatgaaccctattgcggtgttggctgcacgcatggataatcaattaattagtaatttcaatcacactggc---tatatatgtcaatgttatat |
403 |
Q |
| |
|
||||||||||||||| | |||||||||||||||| |||||||| |||||||||||||||| ||| ||||||| ||| ||||| |||||||||||||| |
|
|
| T |
45302766 |
ctttccaatgaaccccaatgcggtgttggctgcatgcatggatgatcaattaattagtaacttcgatcacaccggctattatatgtgtcaatgttatat |
45302864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 749
Target Start/End: Original strand, 38588222 - 38588302
Alignment:
| Q |
669 |
ttgggaacagtgatgtattcgtcatagacaccagccttaacgtagataaaatacctgcctttgtttcccttaggataagag |
749 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||||| || ||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
38588222 |
ttgggaatggtgatgtactcgtcatagaccccagccttgacatagataatgtatctgcctttgaatcccttaggataagag |
38588302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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