View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5035-Insertion-1 (Length: 956)

Name: NF5035-Insertion-1
Description: NF5035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5035-Insertion-1
NF5035-Insertion-1
[»] chr1 (47 HSPs)
chr1 (8-956)||(45935295-45936249)
chr1 (81-128)||(25715343-25715390)
chr1 (78-128)||(28090711-28090761)
chr1 (78-128)||(37462893-37462943)
chr1 (78-128)||(41560444-41560494)
chr1 (78-129)||(10200322-10200373)
chr1 (78-156)||(30202118-30202197)
chr1 (78-129)||(39140730-39140781)
chr1 (78-128)||(4590549-4590599)
chr1 (78-128)||(5338928-5338978)
chr1 (78-128)||(8796424-8796474)
chr1 (78-128)||(21769728-21769778)
chr1 (78-128)||(26113456-26113506)
chr1 (78-128)||(32404543-32404593)
chr1 (78-128)||(34444571-34444621)
chr1 (78-128)||(44751699-44751749)
chr1 (78-128)||(44941793-44941843)
chr1 (78-128)||(52561606-52561656)
chr1 (83-128)||(26299288-26299333)
chr1 (78-127)||(28511819-28511868)
chr1 (80-128)||(7124358-7124406)
chr1 (82-153)||(31274392-31274464)
chr1 (78-125)||(2429649-2429696)
chr1 (82-125)||(9599414-9599457)
chr1 (89-128)||(15784982-15785021)
chr1 (78-125)||(17269009-17269056)
chr1 (78-125)||(27704165-27704212)
chr1 (78-125)||(36339824-36339871)
chr1 (78-125)||(37294128-37294175)
chr1 (89-128)||(43481815-43481854)
chr1 (78-125)||(52532636-52532683)
chr1 (78-128)||(1210960-1211010)
chr1 (78-128)||(2914140-2914190)
chr1 (78-128)||(19908052-19908102)
chr1 (78-128)||(22175360-22175410)
chr1 (78-128)||(25979248-25979298)
chr1 (78-128)||(27847817-27847867)
chr1 (78-128)||(29577467-29577517)
chr1 (78-128)||(38807688-38807738)
chr1 (78-128)||(38877360-38877410)
chr1 (78-128)||(43240396-43240446)
chr1 (78-128)||(49347410-49347460)
chr1 (78-128)||(50257785-50257835)
chr1 (78-123)||(2544808-2544853)
chr1 (92-152)||(4029351-4029412)
chr1 (78-127)||(11941598-11941647)
chr1 (83-128)||(40568427-40568472)
[»] chr3 (35 HSPs)
chr3 (254-648)||(15817624-15818016)
chr3 (690-956)||(15818012-15818268)
chr3 (8-69)||(15817524-15817585)
chr3 (78-128)||(24778626-24778676)
chr3 (78-154)||(45374467-45374544)
chr3 (850-956)||(15831266-15831378)
chr3 (80-128)||(40672384-40672432)
chr3 (78-128)||(15296122-15296172)
chr3 (78-128)||(24541349-24541399)
chr3 (78-128)||(40116355-40116405)
chr3 (78-128)||(40991646-40991696)
chr3 (78-128)||(41529976-41530026)
chr3 (78-124)||(46148243-46148289)
chr3 (78-128)||(48508450-48508500)
chr3 (78-128)||(48734164-48734214)
chr3 (78-128)||(52927865-52927915)
chr3 (78-154)||(12096695-12096772)
chr3 (78-127)||(29601107-29601156)
chr3 (481-550)||(43953280-43953349)
chr3 (80-128)||(19676098-19676146)
chr3 (84-128)||(38060935-38060979)
chr3 (78-125)||(42510036-42510083)
chr3 (81-128)||(49503585-49503632)
chr3 (78-128)||(5169047-5169097)
chr3 (78-128)||(19737199-19737248)
chr3 (78-128)||(19758102-19758151)
chr3 (78-128)||(31566178-31566228)
chr3 (78-128)||(37083309-37083359)
chr3 (78-128)||(45486866-45486916)
chr3 (78-128)||(54128594-54128644)
chr3 (78-154)||(7895870-7895947)
chr3 (78-123)||(23534592-23534637)
chr3 (83-128)||(31146919-31146964)
chr3 (78-127)||(39208823-39208872)
chr3 (78-154)||(53262356-53262433)
[»] chr4 (45 HSPs)
chr4 (560-761)||(5164246-5164446)
chr4 (779-886)||(5191949-5192055)
chr4 (779-852)||(5164552-5164626)
chr4 (78-153)||(15661863-15661939)
chr4 (560-681)||(5191687-5191807)
chr4 (78-128)||(26024867-26024917)
chr4 (78-128)||(35690486-35690536)
chr4 (78-154)||(4441068-4441145)
chr4 (78-125)||(28467653-28467700)
chr4 (84-154)||(30634096-30634167)
chr4 (89-128)||(47265212-47265251)
chr4 (78-128)||(48174110-48174160)
chr4 (78-123)||(51176789-51176834)
chr4 (80-128)||(55007963-55008011)
chr4 (92-128)||(56375519-56375555)
chr4 (93-128)||(1380600-1380635)
chr4 (89-128)||(4879126-4879165)
chr4 (89-128)||(7947163-7947202)
chr4 (89-128)||(15665327-15665366)
chr4 (81-128)||(28236400-28236447)
chr4 (78-125)||(29399019-29399066)
chr4 (78-125)||(36255542-36255589)
chr4 (81-128)||(45209222-45209269)
chr4 (89-128)||(50862857-50862896)
chr4 (89-128)||(50967045-50967084)
chr4 (661-738)||(5186136-5186214)
chr4 (78-128)||(21359242-21359292)
chr4 (92-153)||(21528517-21528579)
chr4 (78-128)||(23906314-23906364)
chr4 (78-128)||(25575039-25575089)
chr4 (78-128)||(26037522-26037572)
chr4 (78-128)||(27450197-27450247)
chr4 (78-128)||(31959831-31959881)
chr4 (78-128)||(39100553-39100603)
chr4 (78-128)||(49939751-49939801)
chr4 (78-128)||(51421945-51421995)
chr4 (78-128)||(51438660-51438710)
chr4 (78-128)||(52569532-52569582)
chr4 (91-128)||(7544548-7544585)
chr4 (78-127)||(13805283-13805332)
chr4 (83-128)||(19969401-19969446)
chr4 (78-127)||(28486136-28486185)
chr4 (80-152)||(37488308-37488381)
chr4 (83-128)||(50238632-50238677)
chr4 (83-128)||(50238718-50238763)
[»] chr7 (34 HSPs)
chr7 (76-128)||(9210721-9210773)
chr7 (78-128)||(28708596-28708646)
chr7 (78-125)||(24376043-24376090)
chr7 (78-128)||(1011261-1011311)
chr7 (78-128)||(2885739-2885789)
chr7 (78-151)||(6375083-6375157)
chr7 (78-128)||(28627950-28628000)
chr7 (78-128)||(40979945-40979995)
chr7 (82-128)||(42187660-42187706)
chr7 (78-128)||(45601691-45601741)
chr7 (78-128)||(47852302-47852352)
chr7 (78-153)||(28208319-28208395)
chr7 (92-155)||(29650613-29650677)
chr7 (81-128)||(6263477-6263524)
chr7 (89-128)||(7273326-7273365)
chr7 (78-152)||(12841267-12841342)
chr7 (78-121)||(25891103-25891146)
chr7 (89-128)||(27649006-27649045)
chr7 (78-128)||(4604762-4604812)
chr7 (78-128)||(11594175-11594225)
chr7 (78-128)||(14057693-14057743)
chr7 (78-128)||(14367721-14367771)
chr7 (78-128)||(21078132-21078182)
chr7 (78-128)||(31682619-31682669)
chr7 (78-128)||(35906218-35906268)
chr7 (78-128)||(36101794-36101844)
chr7 (78-128)||(36652207-36652257)
chr7 (78-128)||(37618160-37618210)
chr7 (78-128)||(39906389-39906439)
chr7 (90-128)||(42969925-42969963)
chr7 (78-128)||(44855191-44855241)
chr7 (78-128)||(45836499-45836549)
chr7 (78-128)||(47652762-47652812)
chr7 (92-152)||(31005434-31005495)
[»] chr8 (20 HSPs)
chr8 (78-128)||(490550-490600)
chr8 (78-128)||(1928604-1928654)
chr8 (78-128)||(45419450-45419500)
chr8 (80-128)||(45041333-45041381)
chr8 (78-129)||(30689950-30690001)
chr8 (78-128)||(35914618-35914668)
chr8 (78-129)||(1313779-1313830)
chr8 (78-129)||(29520864-29520915)
chr8 (78-125)||(32931175-32931222)
chr8 (78-128)||(11523740-11523790)
chr8 (78-128)||(12491155-12491205)
chr8 (78-128)||(14742099-14742149)
chr8 (78-128)||(16035744-16035794)
chr8 (78-128)||(18741847-18741897)
chr8 (78-128)||(18746811-18746861)
chr8 (78-124)||(27556323-27556369)
chr8 (78-128)||(32276900-32276950)
chr8 (78-128)||(36565258-36565308)
chr8 (92-153)||(44047523-44047585)
chr8 (79-124)||(14903777-14903822)
[»] chr6 (16 HSPs)
chr6 (78-128)||(34522-34572)
chr6 (78-128)||(30031471-30031521)
chr6 (78-128)||(12890790-12890840)
chr6 (89-128)||(5897683-5897722)
chr6 (78-125)||(8364771-8364818)
chr6 (78-129)||(31819046-31819097)
chr6 (81-154)||(579636-579710)
chr6 (78-128)||(655411-655461)
chr6 (78-128)||(3206476-3206526)
chr6 (78-128)||(5096049-5096099)
chr6 (78-128)||(18130831-18130881)
chr6 (78-128)||(23888495-23888545)
chr6 (78-128)||(28085591-28085641)
chr6 (78-120)||(30642984-30643026)
chr6 (78-128)||(32068635-32068685)
chr6 (78-150)||(5258142-5258215)
[»] chr5 (28 HSPs)
chr5 (78-128)||(27386555-27386605)
chr5 (78-135)||(32442135-32442192)
chr5 (76-128)||(41894286-41894338)
chr5 (78-128)||(14667986-14668036)
chr5 (78-128)||(20456988-20457038)
chr5 (78-128)||(29922499-29922549)
chr5 (78-128)||(38132551-38132601)
chr5 (78-128)||(42272692-42272742)
chr5 (78-127)||(418052-418101)
chr5 (78-125)||(7359281-7359328)
chr5 (81-128)||(38105280-38105327)
chr5 (79-122)||(41108752-41108795)
chr5 (78-128)||(1275479-1275529)
chr5 (78-128)||(2915513-2915563)
chr5 (90-128)||(5558368-5558406)
chr5 (78-128)||(7678692-7678742)
chr5 (78-128)||(9235262-9235311)
chr5 (78-128)||(13561403-13561453)
chr5 (89-154)||(14665938-14666004)
chr5 (90-128)||(18855834-18855872)
chr5 (78-128)||(29816597-29816647)
chr5 (78-128)||(30213790-30213840)
chr5 (78-128)||(30639733-30639783)
chr5 (78-128)||(38685182-38685232)
chr5 (82-128)||(39322096-39322142)
chr5 (78-128)||(42576225-42576275)
chr5 (83-128)||(408511-408556)
chr5 (78-127)||(11069180-11069229)
[»] chr2 (28 HSPs)
chr2 (78-128)||(9531617-9531667)
chr2 (78-129)||(887081-887132)
chr2 (78-125)||(3720435-3720482)
chr2 (81-128)||(10516766-10516813)
chr2 (78-128)||(11412925-11412975)
chr2 (78-128)||(12520079-12520129)
chr2 (78-128)||(12882062-12882112)
chr2 (78-128)||(18959126-18959176)
chr2 (78-128)||(25384684-25384734)
chr2 (78-128)||(33504439-33504489)
chr2 (82-128)||(43573147-43573193)
chr2 (78-127)||(39709219-39709268)
chr2 (76-128)||(440929-440981)
chr2 (78-153)||(3635314-3635390)
chr2 (78-153)||(12734915-12734991)
chr2 (78-121)||(3481369-3481412)
chr2 (78-125)||(9496081-9496128)
chr2 (78-129)||(45543089-45543140)
chr2 (78-128)||(227404-227454)
chr2 (78-128)||(4807810-4807860)
chr2 (78-128)||(11992125-11992175)
chr2 (78-128)||(12474944-12474994)
chr2 (78-128)||(17670683-17670733)
chr2 (78-128)||(28508893-28508943)
chr2 (78-128)||(30306247-30306297)
chr2 (78-128)||(38435167-38435217)
chr2 (91-128)||(16521024-16521061)
chr2 (78-119)||(32364947-32364988)
[»] scaffold1318 (1 HSPs)
scaffold1318 (78-128)||(546-596)
[»] scaffold0491 (1 HSPs)
scaffold0491 (78-128)||(3652-3702)
[»] scaffold0392 (1 HSPs)
scaffold0392 (78-128)||(6789-6839)
[»] scaffold0168 (1 HSPs)
scaffold0168 (78-128)||(28906-28956)
[»] scaffold0050 (1 HSPs)
scaffold0050 (78-128)||(58243-58293)
[»] scaffold0199 (1 HSPs)
scaffold0199 (78-150)||(14798-14871)


Alignment Details
Target: chr1 (Bit Score: 839; Significance: 0; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 839; E-Value: 0
Query Start/End: Original strand, 8 - 956
Target Start/End: Original strand, 45935295 - 45936249
Alignment:
Q  8 ttcttgccttcatgccctctggatgggccattattctggtaagctaaaattcctgcatcatatagctaacaacattatggagtaatttgatccatgtagc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  45935295 ttcttgccttcatgccctctggatgggccattattctggtaagctaaaattcctgcatcatatagctaacaacattatggagtaatttgatccatgtaac 45935394  T
Q  108 ggacctcacttagtgggataatcttggtcgtcgtcgttgttgttgtacatagccaacaacaatttttgctcattttgctattgtatgatatgtattagga 207  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45935395 ggacctcacttagtgggataatcttggtcgttgttgttgttgttgtacatagccaacaacaattttttctcattttgctattgtatgatatgtattagga 45935494  T
Q  208 agattgaagaagattttatagaggcttagatatatttttaagtctttaaatatgcttcattttgttttggtctctgcaaaagaagttgtggtttaaatat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935495 agattgaagaagattttatagaggcttagatatatttttaagtctttaaatatgcttcattttgttttggtctctgcaaaagaagttgtggtttaaatat 45935594  T
Q  308 gattttaatccctgaaattataacannnnnnnctttctcttttgcaatcaagattgcacaaacatgcaggggactcttgaagtgggctaaactatgggct 407  Q
    ||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935595 gattttaattcctgaaattataacatttttttctttctcttttgcaatcaagattgcacaaacatgcaggggactcttgaagtgggctaaactatgggct 45935694  T
Q  408 tcagtgagagaactttcaagagcatatgaatatgtaatggggttgataattttcatgccagcagcagttttatcatggttcccatttgtgtcggagttcc 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935695 tcagtgagagaactttcaagagcatatgaatatgtaatggggttgataattttcatgccagcagcagttttatcatggttcccatttgtgtcggagttcc 45935794  T
Q  508 aaacccggttgctattcaatcaagcatgtagtagaggacttcagatttcaaggattcttgctggaaagaaagacactaataaaactgaatgatgttttat 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935795 aaacccggttgctattcaatcaagcatgtagtagaggacttcagatttcaaggattcttgctggaaagaaagacactaataaaactgaatgatgttttat 45935894  T
Q  608 tatatttttcaggtaacatcttgcatttcctatatgattttaatttatatgcgccgtcaatgtaaagattttttcactcgtaatttttatatcattaaaa 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935895 tatatttttcaggtaacatcttgcatttcctatatgattttaatttatatgcgccgtcaatgtaaagattttttcactcgtaatttttatatcattaaaa 45935994  T
Q  708 gcatgtaactttaacgataactacttctaaactcgtacatatgattgattgtgaatttttgatagtgtaaattttcctctattcactgattccatatttt 807  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  45935995 ccatttaactttaacgataactacttctaaactcgtacatatgattgattgtgaattgttgatagtgtaaattttcctctactcactgattccatatttt 45936094  T
Q  808 tccaatgtaggaaggaaccgaaagttttcagtttgaagagaacatgaaattttgcgaattcagattatttcctttccctg-tagctc-attttacagact 905  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  45936095 tccaatgtaggaaggaaccgaaagttttcggtttgaagagaacatgaaattttgcgaattctgattatttcctttccctgttagctcaattttacagact 45936194  T
Q  906 tggaacatagaacaggatag--aaattcaaatac-aaatctaggc-atggctaaa 956  Q
    |||||||||||||||||  |  |||||||||||| |||||||||| |||||||||    
T  45936195 tggaacatagaacaggaatggaaaattcaaatacaaaatctaggcaatggctaaa 45936249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 25715390 - 25715343
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  25715390 attatggcgtaatttgatccatgtagccgacctcacttagtgggataa 25715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 28090761 - 28090711
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  28090761 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 28090711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 37462943 - 37462893
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  37462943 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 37462893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 41560444 - 41560494
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  41560444 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 41560494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 10200373 - 10200322
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    ||||| |||| ||||||||||||||||||| ||||||||||| |||||||||    
T  10200373 aacatcatggtgtaatttgatccatgtagccgacctcacttaatgggataat 10200322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 30202197 - 30202118
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgtaca 156  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||  |||||| || || ||||||||||||||    
T  30202197 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgtaca 30202118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 39140730 - 39140781
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    |||||||||| |||||||||| |||||||| |||| ||||||||||||||||    
T  39140730 aacattatggcgtaatttgattcatgtagccgaccccacttagtgggataat 39140781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 4590599 - 4590549
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  4590599 aacaatatggtgtaatttgatccatgtagccgaccccacttagtgggataa 4590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 5338928 - 5338978
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||||||||  ||||||||||||| |||||    
T  5338928 aacattatggcgtaatttgatccatgtagccaacctcacttagtgagataa 5338978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 8796424 - 8796474
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||| ||||||||||| |||| |||||||||||||||    
T  8796424 aacattatggcgtaatttaatccatgtagccgaccccacttagtgggataa 8796474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 21769778 - 21769728
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||| |||||    
T  21769778 aacattatggcgtaatttgatccatgtagccgaccccacttagtgtgataa 21769728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 26113506 - 26113456
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||| || |||||||||||||||||    
T  26113506 aacattatggcttaatttgatccatgtagccgagctcacttagtgggataa 26113456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 32404593 - 32404543
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| |||| ||||||||||||||||||| |||| |||||||||||||||    
T  32404593 aacataatggcgtaatttgatccatgtagccgaccccacttagtgggataa 32404543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 34444571 - 34444621
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||| ||||||| |||| |||||||||||||||    
T  34444571 aacattatggtgtaatttgatctatgtagccgaccccacttagtgggataa 34444621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 44751699 - 44751749
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| ||||||||||||||||||||    
T  44751699 aacactatggcgtcatttgatccatgtagccgacctcacttagtgggataa 44751749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 44941843 - 44941793
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  44941843 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggataa 44941793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 52561656 - 52561606
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| | ||||||||||||||||| |||| |||||||||||||||    
T  52561656 aacattatggcgaaatttgatccatgtagccgaccccacttagtgggataa 52561606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 26299288 - 26299333
Alignment:
Q  83 tatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  26299288 tatggcgtaatttgatccatgtagccgaccccacttagtgggataa 26299333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 28511868 - 28511819
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||||||||| ||||||||||| ||||||| |||| ||||||||||||||    
T  28511868 aacattatggcgtaatttgatcaatgtagccgaccccacttagtgggata 28511819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 7124358 - 7124406
Alignment:
Q  80 cattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||| ||  ||||||||||||||| ||||||||||||||||||||    
T  7124358 cattatggtgtcgtttgatccatgtagctgacctcacttagtgggataa 7124406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 31274464 - 31274392
Alignment:
Q  82 ttatggagtaatttgatccatgtagcggacctcacttagtgggataat-cttggtcgtcgtcgttgttgttgt 153  Q
    |||||| |||||||||||  |||||| |||| |||||||||||||||| |||||| || || |||||||||||    
T  31274464 ttatggcgtaatttgatctgtgtagctgaccccacttagtgggataatgcttggttgttgttgttgttgttgt 31274392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 2429696 - 2429649
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||| ||||| |||| ||||||||||||    
T  2429696 aacattatggcgtaatttgatccacgtagccgaccccacttagtggga 2429649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 9599457 - 9599414
Alignment:
Q  82 ttatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||    
T  9599457 ttatggcgtaatttgatccatgtagctgaccttacttagtggga 9599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 15785021 - 15784982
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  15785021 gtaatttgatccatgtagccgacctcatttagtgggataa 15784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 17269056 - 17269009
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||||||||| |||| || |||||||||    
T  17269056 aacattatggcgtaatttgatccatgtagccgaccccatttagtggga 17269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 27704165 - 27704212
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||||||||| |||| | ||||||||||    
T  27704165 aacattatggcgtaatttgatccatgtagccgaccccgcttagtggga 27704212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 36339871 - 36339824
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    ||||||||| |||||||||||||||||||| |||  ||||||||||||    
T  36339871 aacattatgaagtaatttgatccatgtagctgactccacttagtggga 36339824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 37294175 - 37294128
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||||||||| |||| || |||||||||    
T  37294175 aacattatggcgtaatttgatccatgtagctgaccccatttagtggga 37294128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 43481854 - 43481815
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  43481854 gtaatttgatccatgtagccgaccccacttagtgggataa 43481815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 52532683 - 52532636
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  52532683 aacattatggcgtaatttgattcatgtagccgaccccacttagtggga 52532636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 1210960 - 1211010
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  1210960 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 1211010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 2914190 - 2914140
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||| |||||||||||||||  ||| |||||||||||||||    
T  2914190 aacattatggcgtactttgatccatgtagccaaccccacttagtgggataa 2914140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 19908102 - 19908052
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||| | ||||||| ||||||||||| |||| |||||||||||||||    
T  19908102 aacattattgcgtaattttatccatgtagccgaccccacttagtgggataa 19908052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 22175360 - 22175410
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||   ||||||||||||||||| |||| |||||||||||||||    
T  22175360 aacattatggtagaatttgatccatgtagccgaccccacttagtgggataa 22175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 25979298 - 25979248
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  25979298 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 25979248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 27847867 - 27847817
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  ||||||| ||||||||||| || |||||||||||||||||    
T  27847867 aacattatgccgtaattttatccatgtagccgatctcacttagtgggataa 27847817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 29577467 - 29577517
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  29577467 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 29577517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 38807738 - 38807688
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| |||||||| |||||||||| |||| |||||||||||||||    
T  38807738 aacactatggcgtaatttgttccatgtagccgaccccacttagtgggataa 38807688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 38877410 - 38877360
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| || |||||||||||||||| || | |||||||||||||||    
T  38877410 aacattatggcgtcatttgatccatgtagccgaacccacttagtgggataa 38877360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 43240446 - 43240396
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || ||||||| |||||||| ||||||||||||||||||||    
T  43240446 aacactatggcgtcatttgattcatgtagccgacctcacttagtgggataa 43240396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 49347460 - 49347410
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  49347460 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 49347410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 50257785 - 50257835
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||||||||  ||| ||||||||| |||||    
T  50257785 aacattatggtgtaatttgatccatgtagccaaccccacttagtgagataa 50257835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 2544808 - 2544853
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 123  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||    
T  2544808 aacattatggcataatttgatccatgtagccgaccccacttagtgg 2544853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 4029351 - 4029412
Alignment:
Q  92 atttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttg 152  Q
    |||||||||||||||| |||| |||||||||||||||  |||||| || || ||||||||||    
T  4029351 atttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgttgttg 4029412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 11941647 - 11941598
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||||||||| ||| ||||||||||||||  | |||||||||||||||||    
T  11941647 aacattatggcgtattttgatccatgtagtcggcctcacttagtgggata 11941598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 40568472 - 40568427
Alignment:
Q  83 tatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| |||||||||||||||||||  ||| |||||||||||||||    
T  40568472 tatggcgtaatttgatccatgtagccaaccccacttagtgggataa 40568427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 299; Significance: 1e-167; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 299; E-Value: 1e-167
Query Start/End: Original strand, 254 - 648
Target Start/End: Original strand, 15817624 - 15818016
Alignment:
Q  254 taaatatgcttcattttgttttggtctctgcaaaagaagttgtggtttaaatatgattttaatccctgaaattataacannnnnnnctttctcttttgca 353  Q
    |||||||||||| ||||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||       ||  ||||||||||    
T  15817624 taaatatgcttctttttgttttagtctctgcaaaaaaagtttcggtttaaatatgattttaatccctgaaattataacatttttttct--ctcttttgca 15817721  T
Q  354 atcaagattgcacaaacatgcaggggactcttgaagtgggctaaactatgggcttcagtgagagaactttcaagagcatatgaatatgtaatggggttga 453  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15817722 atcaagattgcacaaacatgtaggggactcttgaagtgggcgaaactatgggcttcagtgagagaactttcaagagcatatgaatatgtaatgggattga 15817821  T
Q  454 taattttcatgccagcagcagttttatcatggttcccatttgtgtcggagttccaaacccggttgctattcaatcaagcatgtagtagaggacttcagat 553  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  15817822 taattttcatgccaacagcagttttatcgtggttcccatttgtgtcggagttccaaacgcggttgctattcaatcaagcatttagtagaggacttcagat 15817921  T
Q  554 ttcaaggattcttgctggaaagaaagacactaataaaactgaatgatgttttattatatttttcaggtaacatcttgcatttcctatatgatttt 648  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15817922 ttcaatgattcttgctggaaagaaagacacttacaaaactgaatgatgttttatcatatttttcaggtaacatcttgcatttcctatatgatttt 15818016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 690 - 956
Target Start/End: Original strand, 15818012 - 15818268
Alignment:
Q  690 atttttatatcattaaaagcatgtaactttaacgataactacttctaaactcgtacatatgattgattgtgaatttttgatagtgtaaattttcctctat 789  Q
    |||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||                |||||||||||||     
T  15818012 atttttatatcattaaaaccatttaactttaacgataacgtcttctaaactcgtacatatgattgattgt----------------aaattttcctctac 15818095  T
Q  790 tcactgattccatatttttccaatgtaggaaggaaccgaaagttttcagtttgaagagaacatgaaattttgcgaattcagattatttcctttccctg-t 888  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||| |    
T  15818096 tcactgattccctatttttccaatgtaggaaggaaccggaagttttcggtttgaagagaacatgaaattttgggaattctgattacttcctttccctgtt 15818195  T
Q  889 agctc-attttacagacttggaacatagaacaggatag--aaattcaaatac-aaatctaggc-atggctaaa 956  Q
    ||||| ||||||| ||||| |||||||||||||||  |  |||||||||||| |||||||||| |||||||||    
T  15818196 agctcaattttactgacttagaacatagaacaggaatggaaaattcaaatacaaaatctaggcaatggctaaa 15818268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 15817524 - 15817585
Alignment:
Q  8 ttcttgccttcatgccctctggatgggccattattctggtaagctaaaattcctgcatcata 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15817524 ttcttgccttcatgccctctggatgggccattattctggtaagctaaatttcctgcatcata 15817585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 24778676 - 24778626
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  24778676 aacattatggtgtaatttgatccatgtagccgaccccacttagtgggataa 24778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 45374544 - 45374467
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgta 154  Q
    |||||||||| ||||||| ||||||||||| |||| |||||||||||||||  |||||| || || ||||||||||||    
T  45374544 aacattatggcgtaatttaatccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgttgttgta 45374467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 850 - 956
Target Start/End: Original strand, 15831266 - 15831378
Alignment:
Q  850 catgaaattttgcgaattcagattatttcctttccctg-tagctc-attttacagacttggaacatagaacagg-ataga-aattcaaatac-aaatcta 944  Q
    |||||| ||||| |||||| |||||||||||||||||| |||||| ||||||| ||||| |||| ||||||||| || || ||||||||||| |||||||    
T  15831266 catgaatttttgggaattctgattatttcctttccctgttagctcaattttactgacttagaacgtagaacaggaatggataattcaaatacaaaatcta 15831365  T
Q  945 ggc-atggctaaa 956  Q
    ||| |||||||||    
T  15831366 ggcaatggctaaa 15831378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 40672432 - 40672384
Alignment:
Q  80 cattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  40672432 cattatggcataatttgatccatgtagctgacctcacttagtgggataa 40672384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 15296122 - 15296172
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||||| || |||| |||||||||||||||    
T  15296122 aacattatggtgtaatttgatccatgtggccgaccccacttagtgggataa 15296172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 24541399 - 24541349
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||| | |||| |||||||||||||||    
T  24541399 aacattatggcgtaatttgatccatgtacccgaccccacttagtgggataa 24541349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 40116405 - 40116355
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||| ||||| |||||| |||||||||||||    
T  40116405 aacattatggcgtaatttgatccacgtagccgacctcgcttagtgggataa 40116355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 40991646 - 40991696
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||| |||||    
T  40991646 aacattatggtgtaatttgatccatgtagctgaccccacttagtgagataa 40991696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 41529976 - 41530026
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  41529976 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggataa 41530026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 46148243 - 46148289
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggg 124  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||    
T  46148243 aacattatggcgtaatttgatccatgtagccgaccccacttagtggg 46148289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 48508450 - 48508500
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  48508450 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggataa 48508500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 48734214 - 48734164
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||| |||||||||||||| |||| |||||||||||||||    
T  48734214 aacattatggcgtaagttgatccatgtagctgaccccacttagtgggataa 48734164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 52927915 - 52927865
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||| |||| |||||||||||||||    
T  52927915 aacattatggcataatttgatccatgtagccgaccccacttagtgggataa 52927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 12096772 - 12096695
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgta 154  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||  |||||| || || ||||||||||||    
T  12096772 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgta 12096695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 29601107 - 29601156
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||||||||  ||||||||||||||||||| |||| ||||||||||||||    
T  29601107 aacattatgatgtaatttgatccatgtagctgaccccacttagtgggata 29601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 550
Target Start/End: Complemental strand, 43953349 - 43953280
Alignment:
Q  481 catggttcccatttgtgtcggagttccaaacccggttgctattcaatcaagcatgtagtagaggacttca 550  Q
    |||||||||||||||| || || ||||||||| || |||||||||| |||||||  || |||||||||||    
T  43953349 catggttcccatttgtttcagaattccaaaccaggctgctattcaaccaagcattcagcagaggacttca 43953280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 19676146 - 19676098
Alignment:
Q  80 cattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||| || |||||||||||||||| |||| |||||||||||||||    
T  19676146 cattatggcgtgatttgatccatgtagctgaccccacttagtgggataa 19676098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 38060935 - 38060979
Alignment:
Q  84 atggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||    
T  38060935 atggcgtaatttgatccatgtagccgaccccacttagtgggataa 38060979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 42510083 - 42510036
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  42510083 aacattatggcgtaatttgatccatgtagccgaccccacttagaggga 42510036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 49503632 - 49503585
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||| ||||||||||||||||||| ||||  ||||||||||||||    
T  49503632 attatggcgtaatttgatccatgtagccgaccctacttagtgggataa 49503585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 5169047 - 5169097
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  5169047 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 5169097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 19737199 - 19737248
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||| |||| |||||||||||||||    
T  19737199 aacattatggtataatttgatccatgtagc-gaccccacttagtgggataa 19737248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 19758102 - 19758151
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||| |||| |||||||||||||||    
T  19758102 aacattatggtataatttgatccatgtagc-gaccccacttagtgggataa 19758151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 31566228 - 31566178
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  31566228 aacactatggtgtcatttgatccatgtagccgaccccacttagtgggataa 31566178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 37083359 - 37083309
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||| ||| |||||| |||| |||||||||||||||    
T  37083359 aacattatggcgtaatttggtccttgtagccgaccccacttagtgggataa 37083309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 45486916 - 45486866
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||| | || |||||||||||||||    
T  45486916 aacattatggcataatttgatccatgtagccggccccacttagtgggataa 45486866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 54128594 - 54128644
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||  |||| |||||||||||||||    
T  54128594 aacattatggcataatttgatccatgtaggcgaccccacttagtgggataa 54128644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 7895947 - 7895870
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgta 154  Q
    |||| ||||| || |||||||||||||||| |||| |||||| ||||||||  |||||| || || ||||||||||||    
T  7895947 aacactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgttgttgttgttgta 7895870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 23534637 - 23534592
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 123  Q
    |||||||||| ||||||||||||||||||  |||||||||| ||||    
T  23534637 aacattatggcgtaatttgatccatgtagtcgacctcactttgtgg 23534592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 31146919 - 31146964
Alignment:
Q  83 tatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| ||||||||||||||||||| |||  |||||||||||||||    
T  31146919 tatggtgtaatttgatccatgtagccgactccacttagtgggataa 31146964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 39208823 - 39208872
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||||||||  |||||||||||||||||| ||||| || |||||||||||    
T  39208823 aacattatgacgtaatttgatccatgtagaggaccccagttagtgggata 39208872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 53262356 - 53262433
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgta 154  Q
    |||| ||||| || |||||||| ||||||| |||| |||||||||||||||  |||||| || || ||||||||||||    
T  53262356 aacactatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgta 53262433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 4e-25; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 560 - 761
Target Start/End: Original strand, 5164246 - 5164446
Alignment:
Q  560 gattcttgctggaaagaaagacactaataaaactgaatgatgttttattatatttttcaggtaacatcttgcatttcctatatgattttaatttatatgc 659  Q
    ||||||||| ||||||||||||||| | |||||| |||||| | |||| ||| ||||| |||||||| || || ||||  ||| | ||||||||||||||    
T  5164246 gattcttgccggaaagaaagacacttacaaaactaaatgatatgttatcataattttccggtaacattttccacttcc--tattagtttaatttatatgc 5164343  T
Q  660 gccgtcaatgtaaagatttttt-cactcgtaatttttatatcattaaaagcatgtaactttaacgataactacttctaaactcgtacatatgattgattg 758  Q
     | | |||| |||||||||||| |||| | |||| | |||||||| ||| ||| |||||| || |||||||||||||||| | |||||||| ||| ||||    
T  5164344 acagccaatttaaagattttttacacttgcaattgtcatatcattgaaatcatttaacttcaatgataactacttctaaagttgtacatataattaattg 5164443  T
Q  759 tga 761  Q
    |||    
T  5164444 tga 5164446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 779 - 886
Target Start/End: Original strand, 5191949 - 5192055
Alignment:
Q  779 ttttcctctattcactgattccatatttt-tccaatgtaggaaggaaccgaaagttttcagtttgaagagaacatgaaattttgcgaattcagattattt 877  Q
    |||||||||  ||||||||||| |||||| ||| |||||||||||  ||||||||||||||||||||||||||| ||| ||||| || ||| |||  |||    
T  5191949 ttttcctctcctcactgattccttattttgtccgatgtaggaaggtcccgaaagttttcagtttgaagagaacaagaatttttgggagttctgat--ttt 5192046  T
Q  878 cctttccct 886  Q
    |||||||||    
T  5192047 cctttccct 5192055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 779 - 852
Target Start/End: Original strand, 5164552 - 5164626
Alignment:
Q  779 ttttcctctattcactgattccatat-ttttccaatgtaggaaggaaccgaaagttttcagtttgaagagaacat 852  Q
    |||||||||  ||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  5164552 ttttcctctcctcactgattccttatatttttcaatgtaggcaggaaccgaaagttttcagtttgatgagaacat 5164626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 15661939 - 15661863
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgt 153  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||   ||||| || ||||||||||||||    
T  15661939 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggtttggttgttgtcgttgttgttgt 15661863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 560 - 681
Target Start/End: Original strand, 5191687 - 5191807
Alignment:
Q  560 gattcttgctggaaagaaa-gacactaataaaactgaatgatgttttattatatttttcaggtaacatcttgcatttcctatatgattttaatttatatg 658  Q
    |||||||||| |||| ||| |||||| | ||||||||||||| | |||| ||||||||| |||||||||||||| ||  | || || |||||||||||||    
T  5191687 gattcttgcttgaaaaaaaagacacttacaaaactgaatgatatgttatcatatttttcgggtaacatcttgcaatt--tttacgagtttaatttatatg 5191784  T
Q  659 cgccgtcaatgtaaagatttttt 681  Q
     ||| ||||| |||||| |||||    
T  5191785 tgccatcaatttaaagacttttt 5191807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 26024917 - 26024867
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  26024917 aacattatggtgtaattttatccatgtagccgacctcacttagtgggataa 26024867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 35690486 - 35690536
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  35690486 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 35690536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 4441068 - 4441145
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgta 154  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||  ||| |||||||| ||||||||||||    
T  4441068 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttcgtcgtcgttgttgttgttgta 4441145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 28467653 - 28467700
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||    
T  28467653 aacattatggcgtaatttgatccatgtagcggaccccgcttagtggga 28467700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 30634167 - 30634096
Alignment:
Q  84 atggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgta 154  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||  |||||| || || ||||||||||||    
T  30634167 atggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgta 30634096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 47265251 - 47265212
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  47265251 gtaatttgatccatgtagccgacctcacttagtgggataa 47265212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 48174160 - 48174110
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| || |||||||||||||||| |||| |||||||||||||||    
T  48174160 aacattatggcgtcatttgatccatgtagcagaccccacttagtgggataa 48174110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 51176789 - 51176834
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 123  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||    
T  51176789 aacattatggcataatttgatccatgtagcggaccacacttagtgg 51176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 55007963 - 55008011
Alignment:
Q  80 cattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||  ||||||||||||||||||| |||| |||||||||||||||    
T  55007963 cattatgacgtaatttgatccatgtagccgaccccacttagtgggataa 55008011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 56375519 - 56375555
Alignment:
Q  92 atttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||||||| ||||||||||||||||||||    
T  56375519 atttgatccatgtagccgacctcacttagtgggataa 56375555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 1380600 - 1380635
Alignment:
Q  93 tttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||| ||||||||||||||||||||    
T  1380600 tttgatccatgtagccgacctcacttagtgggataa 1380635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 4879165 - 4879126
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  4879165 gtaatttgatccatgtagccgacctcacttactgggataa 4879126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 7947163 - 7947202
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  7947163 gtaatttgatccatgtagccgaccccacttagtgggataa 7947202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 15665327 - 15665366
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  15665327 gtaatttgatccatgtagctgaccccacttagtgggataa 15665366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 28236400 - 28236447
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||| ||||||||||| ||||||| |||| |||||||||||||||    
T  28236400 attatggtgtaatttgatctatgtagccgaccccacttagtgggataa 28236447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 29399019 - 29399066
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  29399019 aacattatggcgtaatttgattcatgtagctgaccccacttagtggga 29399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 36255589 - 36255542
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| |||||||||||||||| || |||| ||||||||||||    
T  36255589 aacattatggtgtaatttgatccatgtggccgaccccacttagtggga 36255542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 45209269 - 45209222
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||| ||| ||||||||||||||| |||| |||||||||||||||    
T  45209269 attatggcgtagtttgatccatgtagccgaccccacttagtgggataa 45209222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 50862857 - 50862896
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  50862857 gtaatttgatccatgtagccgaccccacttagtgggataa 50862896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 50967084 - 50967045
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  50967084 gtaatttgatccatgtagccgacctcacttagtggaataa 50967045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 661 - 738
Target Start/End: Original strand, 5186136 - 5186214
Alignment:
Q  661 ccgtcaatgtaaagatttttt-cactcgtaatttttatatcattaaaagcatgtaactttaacgataactacttctaaa 738  Q
    |||||||| || ||||||||| |||||| |||| | |||||||||||| ||| |||||| |  ||||||||||||||||    
T  5186136 ccgtcaatttacagattttttacactcgcaattgtcatatcattaaaaccatttaacttcattgataactacttctaaa 5186214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 21359292 - 21359242
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||| |||| ||| |||| |||||||||||||||    
T  21359292 aacattatggcgtaatttgattcatgcagccgaccccacttagtgggataa 21359242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 21528517 - 21528579
Alignment:
Q  92 atttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgt 153  Q
    |||||||||||||||| |||| |||||||||||||||  |||||| || || |||||||||||    
T  21528517 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 21528579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 23906364 - 23906314
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  23906364 aacactatggcgtcatttgatccatgtagctgaccccacttagtgggataa 23906314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 25575039 - 25575089
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||| ||| ||||||||||||||||||| |||| || ||||||||||||    
T  25575039 aacattgtggtgtaatttgatccatgtagcagaccccatttagtgggataa 25575089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 26037572 - 26037522
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| |||||| |||||||||||| |||| |||||||||||||||    
T  26037572 aacactatggcgtaattggatccatgtagccgaccccacttagtgggataa 26037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 27450247 - 27450197
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  27450247 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 27450197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 31959881 - 31959831
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  31959881 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 31959831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 39100603 - 39100553
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||| | ||||||||||| |||| |||||||||||||||    
T  39100603 aacattatggcgtaatataatccatgtagccgaccccacttagtgggataa 39100553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 49939801 - 49939751
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  49939801 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 49939751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 51421945 - 51421995
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  |||||||||||||||||||  | |||||||||||||||||    
T  51421945 aacattatgacgtaatttgatccatgtagccaatctcacttagtgggataa 51421995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 51438660 - 51438710
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| ||||  |||| |||||||||    
T  51438660 aacattatggcgtaatttgatccatgtagctgacccaactttgtgggataa 51438710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 52569582 - 52569532
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  52569582 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 52569532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 7544585 - 7544548
Alignment:
Q  91 aatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  7544585 aatttgatccatgtagccgaccccacttagtgggataa 7544548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 13805332 - 13805283
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    ||||||||||  ||||||||||||||||||  ||| ||||||||||||||    
T  13805332 aacattatgggataatttgatccatgtagccaaccccacttagtgggata 13805283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 19969401 - 19969446
Alignment:
Q  83 tatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| || |||||||||||||||| |||| |||||||||||||||    
T  19969401 tatggcgtcatttgatccatgtagccgaccccacttagtgggataa 19969446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 28486136 - 28486185
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||| ||||| ||||||||||||||||||| ||||||  |||||||||||    
T  28486136 aacaatatggcgtaatttgatccatgtagctgacctcggttagtgggata 28486185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 37488308 - 37488381
Alignment:
Q  80 cattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttg 152  Q
    |||||||| |||||||||||||||||||   || |||||||||||||||  |||||| || || ||||||||||    
T  37488308 cattatggcgtaatttgatccatgtagccagccccacttagtgggataaggcttggttgttgttgttgttgttg 37488381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 50238677 - 50238632
Alignment:
Q  83 tatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| || |||||||||||||||| |||| |||||||||||||||    
T  50238677 tatggcgtcatttgatccatgtagccgaccccacttagtgggataa 50238632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 50238763 - 50238718
Alignment:
Q  83 tatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| || |||||||||||||||| |||| |||||||||||||||    
T  50238763 tatggcgtcatttgatccatgtagccgaccccacttagtgggataa 50238718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 9210773 - 9210721
Alignment:
Q  76 acaacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  9210773 acaacattatggcgtaatttgatccatgtagctgaccccacttagtgggataa 9210721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 28708596 - 28708646
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  28708596 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 28708646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 24376090 - 24376043
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  24376090 aacattatggcgtaatttgatccatgtagccgacctcgcttagtggga 24376043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 1011261 - 1011311
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||| ||||||| |||| |||||||||||||||    
T  1011261 aacattatggtgtaatttgatctatgtagccgaccccacttagtgggataa 1011311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 2885789 - 2885739
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  2885789 aacactatggtgtaatttgatccatgtagccgaccccacttagtgggataa 2885739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 6375083 - 6375157
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgtt 151  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||  |||||| || ||||||||||||    
T  6375083 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtcgttgttgtt 6375157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 28628000 - 28627950
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||  |||||||||||||||    
T  28628000 aacattatggcgtaatttgatccatgtagccgactccacttagtgggataa 28627950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 40979995 - 40979945
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  40979995 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggataa 40979945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 42187660 - 42187706
Alignment:
Q  82 ttatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||    
T  42187660 ttatggcgtaatttgatccatgtagccgaccccacttagtgggataa 42187706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 45601691 - 45601741
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| || |||||||||||||||||    
T  45601691 aacactatggtgtaatttgatccatgtagctgaactcacttagtgggataa 45601741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 47852302 - 47852352
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| ||||||| |||||||    
T  47852302 aacattatggcgtaatttgatccatgtagccgaccccacttagggggataa 47852352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 28208395 - 28208319
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgt 153  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||  |||||| || || |||||||||||    
T  28208395 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 28208319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 29650613 - 29650677
Alignment:
Q  92 atttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgtac 155  Q
    |||||||||||||||| |||| |||||||||||||||  |||||| || || |||||||||||||    
T  29650613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgtac 29650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 6263477 - 6263524
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||  |||||||||||||||||| |||| |||||||||||||||    
T  6263477 attatggcataatttgatccatgtagccgaccccacttagtgggataa 6263524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 7273326 - 7273365
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  7273326 gtaatttgatccatgtagccgaccccacttagtgggataa 7273365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 12841342 - 12841267
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttg 152  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||  |||||| || || ||||||||||    
T  12841342 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttg 12841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 25891103 - 25891146
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagt 121  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||    
T  25891103 aacattatggtgtaatttgatccatgtagccgaccccacttagt 25891146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 27649006 - 27649045
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  27649006 gtaatttgatccatgtagccgaccccacttagtgggataa 27649045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 4604762 - 4604812
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||| |||||||||||||||  ||| |||||||||||||||    
T  4604762 aacattatggcgtactttgatccatgtagccaaccccacttagtgggataa 4604812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 11594175 - 11594225
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  11594175 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 11594225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 14057693 - 14057743
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||||||||  ||| |||||||| ||||||    
T  14057693 aacattatggggtaatttgatccatgtagccaaccccacttagtaggataa 14057743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 14367721 - 14367771
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||||||||  ||| |||||||| ||||||    
T  14367721 aacattatggggtaatttgatccatgtagccaaccccacttagtaggataa 14367771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 21078132 - 21078182
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| || |||||||||||||||| ||| ||| ||||||||||||    
T  21078132 aacattatggcgtcatttgatccatgtagccgacttcatttagtgggataa 21078182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 31682669 - 31682619
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  31682669 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 31682619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 35906268 - 35906218
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  35906268 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 35906218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 36101844 - 36101794
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  ||||||||||||||||||  |||| |||||||||||||||    
T  36101844 aacattatgacgtaatttgatccatgtagttgaccccacttagtgggataa 36101794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 36652207 - 36652257
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  36652207 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 36652257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 37618160 - 37618210
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  37618160 aacactatggtgtcatttgatccatgtagccgaccccacttagtgggataa 37618210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 39906439 - 39906389
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  39906439 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 39906389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 42969925 - 42969963
Alignment:
Q  90 taatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  42969925 taatttgatccatgtagccgaccccacttagtgggataa 42969963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 44855241 - 44855191
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| |||||||| |||||||||| |||| |||||||||||||||    
T  44855241 aacactatggcgtaatttggtccatgtagccgaccccacttagtgggataa 44855191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 45836549 - 45836499
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  45836549 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 45836499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 47652762 - 47652812
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||| ||||||| |||||| |||| |||||||||||||||    
T  47652762 aacattatggcgtaacttgatccctgtagccgaccccacttagtgggataa 47652812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 31005434 - 31005495
Alignment:
Q  92 atttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttg 152  Q
    |||||||||||||||| |||| |||||||||||||||  |||||| || || ||||||||||    
T  31005434 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttg 31005495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 490550 - 490600
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  490550 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 490600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 1928654 - 1928604
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  1928654 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 1928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 45419450 - 45419500
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  45419450 aacattatggtgtaatttgatccatgtagccgaccccacttagtgggataa 45419500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 45041381 - 45041333
Alignment:
Q  80 cattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  45041381 cattatggcgtaatttgatccatgtagctgaccccacttagtgggataa 45041333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 30689950 - 30690001
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    |||||||||  ||||||||||||||||||| |||| ||||||||||||||||    
T  30689950 aacattatgacgtaatttgatccatgtagccgaccccacttagtgggataat 30690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 35914668 - 35914618
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||| |||||    
T  35914668 aacattatggcgtaatttgatccatgtagctgaccccacttagtgagataa 35914618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 1313779 - 1313830
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    |||||||||| ||||||| ||||||||||  |||| ||||||||||||||||    
T  1313779 aacattatggcgtaattttatccatgtagttgaccccacttagtgggataat 1313830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 29520864 - 29520915
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    |||||||||| |||||||||||||||||||  ||| || |||||||||||||    
T  29520864 aacattatggcgtaatttgatccatgtagcccaccccatttagtgggataat 29520915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 32931175 - 32931222
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  32931175 aacattatggcataatttgatccatgtagccgaccccacttagtggga 32931222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 11523790 - 11523740
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  11523790 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 11523740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 12491205 - 12491155
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  12491205 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 12491155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 14742149 - 14742099
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  14742149 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 14742099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 16035794 - 16035744
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  |||||||||| |||||||| |||| |||||||||||||||    
T  16035794 aacattatgacgtaatttgattcatgtagctgaccccacttagtgggataa 16035744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 18741847 - 18741897
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  ||||||||||||| ||||| |||| |||||||||||||||    
T  18741847 aacattatgacgtaatttgatccaagtagccgaccccacttagtgggataa 18741897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 18746811 - 18746861
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  ||||||||||||| ||||| |||| |||||||||||||||    
T  18746811 aacattatgacgtaatttgatccaagtagccgaccccacttagtgggataa 18746861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 27556369 - 27556323
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggg 124  Q
    ||||||||||  |||||||||||||||||| |||| |||||||||||    
T  27556369 aacattatggcataatttgatccatgtagccgaccccacttagtggg 27556323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 32276900 - 32276950
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||  || | |||||||||||||||    
T  32276900 aacattatggcgtaatttgatccatgtagacgaacccacttagtgggataa 32276950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 36565308 - 36565258
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  36565308 aacactatggcgttatttgatccatgtagccgaccccacttagtgggataa 36565258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 44047585 - 44047523
Alignment:
Q  92 atttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgt 153  Q
    |||||||||||||||| |||| |||||||||||||||  |||||| || || |||||||||||    
T  44047585 atttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 44047523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 14903777 - 14903822
Alignment:
Q  79 acattatggagtaatttgatccatgtagcggacctcacttagtggg 124  Q
    ||||||||| |||||||||||||||||||  ||| |||||||||||    
T  14903777 acattatggcgtaatttgatccatgtagcttaccccacttagtggg 14903822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 34572 - 34522
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  34572 aacattatggcgtaatttgatccatgtagctgaccccacttagtgggataa 34522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 30031471 - 30031521
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  30031471 aacactatggcgtaatttgatccatgtagccgacctcacttagtgggataa 30031521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 12890790 - 12890840
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  12890790 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggataa 12890840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 5897683 - 5897722
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  5897683 gtaatttgatccatgtagcggatcccacttagtgggataa 5897722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 8364771 - 8364818
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||||||||| |||| | ||||||||||    
T  8364771 aacattatggcgtaatttgatccatgtagccgaccccgcttagtggga 8364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 31819046 - 31819097
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    |||| ||||| || |||||||||||||||| |||| ||||||||||||||||    
T  31819046 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataat 31819097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 579636 - 579710
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggat-aatcttggtcgtcgtcgttgttgttgta 154  Q
    ||||||| ||||||||||| ||||||| || | ||||||||||||| || |||||| || || ||||||||||||    
T  579636 attatggcgtaatttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttgttgttgttgta 579710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 655461 - 655411
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||| ||| | ||||||||||||||||  ||||||||||||||||||||    
T  655461 aacattgtggtgcaatttgatccatgtaggtgacctcacttagtgggataa 655411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 3206526 - 3206476
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  3206526 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 3206476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 5096049 - 5096099
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||| ||||||| || | |||||||||||||||    
T  5096049 aacattatggcgtaatttgatctatgtagccgatcccacttagtgggataa 5096099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 18130881 - 18130831
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| ||| || ||||||||    
T  18130881 aacattatggtgtaatttgatccatgtagccgaccccacctaatgggataa 18130831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 23888545 - 23888495
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| ||| || ||||||||    
T  23888545 aacattatggtgtaatttgatccatgtagcagaccccacctaatgggataa 23888495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 28085591 - 28085641
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  28085591 aacactatggtgtcatttgatccatgtagccgaccccacttagtgggataa 28085641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 30642984 - 30643026
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttag 120  Q
    |||||||||||||||||||||| ||||||| |||| |||||||    
T  30642984 aacattatggagtaatttgatctatgtagccgaccccacttag 30643026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 32068635 - 32068685
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||| |||||||| || | |||||||||||||||    
T  32068635 aacattatggcgtaatttgatacatgtagccgatcccacttagtgggataa 32068685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 5258215 - 5258142
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgt 150  Q
    |||| ||||| || |||||||||| ||||| |||| ||||||||||||||| ||||||| || || ||||||||    
T  5258215 aacactatggcgtcatttgatccacgtagccgaccccacttagtgggataagtcttggttgttgttgttgttgt 5258142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 27386555 - 27386605
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  27386555 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 27386605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 32442192 - 32442135
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataatcttggt 135  Q
    |||||||||| ||||||||||||||||||| |||  ||||||||||||||| ||||||    
T  32442192 aacattatggcgtaatttgatccatgtagccgactccacttagtgggataagcttggt 32442135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 41894286 - 41894338
Alignment:
Q  76 acaacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  41894286 acaacattatggtgtaatttgatccatgtagccaaccccacttagtgggataa 41894338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 14667986 - 14668036
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||| | |||| |||||||||||||||    
T  14667986 aacattatggtgtaatttgatccatgtaaccgaccccacttagtgggataa 14668036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 20456988 - 20457038
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| || |||||||||||||||| |||| |||||||||||||||    
T  20456988 aacattatggcgtcatttgatccatgtagccgaccccacttagtgggataa 20457038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 29922499 - 29922549
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||||||||  ||||||||| |||||||||    
T  29922499 aacattatggcgtaatttgatccatgtagccaacctcacttggtgggataa 29922549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 38132551 - 38132601
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||||| || |||| |||||||||||||||    
T  38132551 aacattatggcgtaatttgatccatgtggccgaccccacttagtgggataa 38132601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 42272692 - 42272742
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| || |||||||||||||||| |||| |||||||||||||||    
T  42272692 aacattatggcgtcatttgatccatgtagctgaccccacttagtgggataa 42272742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 418101 - 418052
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||||||||| ||||||||||||||||||| |||| ||||| ||||||||    
T  418101 aacattatggcgtaatttgatccatgtagccgaccccacttggtgggata 418052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 7359328 - 7359281
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||  ||||||||||||||||||| |||| ||||||||||||    
T  7359328 aacattatgacgtaatttgatccatgtagctgaccccacttagtggga 7359281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 38105327 - 38105280
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||| |||||||||||||||||| | |||||||| ||||||||||    
T  38105327 attatggcgtaatttgatccatgtagtgtacctcactaagtgggataa 38105280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 41108795 - 41108752
Alignment:
Q  79 acattatggagtaatttgatccatgtagcggacctcacttagtg 122  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||    
T  41108795 acattatggcgtaatttgatccatgtagctgaccccacttagtg 41108752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 1275479 - 1275529
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  || |||||||||||||||| |||| |||||||||||||||    
T  1275479 aacattatgacgtcatttgatccatgtagccgaccccacttagtgggataa 1275529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 2915563 - 2915513
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  2915563 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 2915513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 5558368 - 5558406
Alignment:
Q  90 taatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  5558368 taatttgatccatgtagccgaccccacttagtgggataa 5558406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 7678692 - 7678742
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  ||| ||||||||||||||| |||| |||||||||||||||    
T  7678692 aacattatgaggtagtttgatccatgtagccgaccccacttagtgggataa 7678742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 9235262 - 9235311
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||| |||| |||||||||||||||    
T  9235262 aacattatggcataatttgatccatgtagccgacc-cacttagtgggataa 9235311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 13561453 - 13561403
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  13561453 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 13561403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 14665938 - 14666004
Alignment:
Q  89 gtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgta 154  Q
    ||||||||||| ||||||| |||| |||||||||||||||  |||||| || || ||||||||||||    
T  14665938 gtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgta 14666004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 18855834 - 18855872
Alignment:
Q  90 taatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  18855834 taatttgatccatgtagccgaccccacttagtgggataa 18855872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 29816597 - 29816647
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  29816597 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 29816647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 30213790 - 30213840
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  30213790 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 30213840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 30639783 - 30639733
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||| ||| ||||||||||||||||||| |||| || ||||||||||||    
T  30639783 aacattgtggtgtaatttgatccatgtagccgaccccatttagtgggataa 30639733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 38685182 - 38685232
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  38685182 aacaatatggcgtcatttgatccatgtagccgaccccacttagtgggataa 38685232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 39322142 - 39322096
Alignment:
Q  82 ttatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||| ||||||||||||||||||| || | |||||||||||||||    
T  39322142 ttatggcgtaatttgatccatgtagccgatcccacttagtgggataa 39322096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 42576225 - 42576275
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| |||| ||||||||||||||||||| ||||  ||||||||||||||    
T  42576225 aacataatggcgtaatttgatccatgtagccgacccgacttagtgggataa 42576275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 408556 - 408511
Alignment:
Q  83 tatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||| || |||||||||||||||| |||| |||||||||||||||    
T  408556 tatggcgtcatttgatccatgtagccgaccccacttagtgggataa 408511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 11069229 - 11069180
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||||||||| |||||||||||||| |||| |||| ||| ||||||||||    
T  11069229 aacattatggcgtaatttgatccatatagctgaccccacatagtgggata 11069180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 9531667 - 9531617
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  9531667 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataa 9531617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 887132 - 887081
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    |||||||||| ||||||||||||||||||| |||| ||||| ||||||||||    
T  887132 aacattatggcgtaatttgatccatgtagctgaccccacttggtgggataat 887081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 3720482 - 3720435
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  3720482 aacattatggtgtaatttgatccatgtagccgaccccacttagtggga 3720435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 10516813 - 10516766
Alignment:
Q  81 attatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||    
T  10516813 attatggcgtaatttgatccatgtagctgatctcacttagtgggataa 10516766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 11412925 - 11412975
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| || |||||||||| ||||||    
T  11412925 aacattatggtgtaatttgatccatgtagccgaactcacttagtaggataa 11412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 12520129 - 12520079
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  12520129 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggataa 12520079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 12882112 - 12882062
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||| ||| |||||||||||||||||||  |||||||||||||||||||    
T  12882112 aacattttggcgtaatttgatccatgtagcctacctcacttagtgggataa 12882062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 18959126 - 18959176
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  |||||||||||||||||| |||| |||||||||||||||    
T  18959126 aacattatggcataatttgatccatgtagctgaccccacttagtgggataa 18959176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 25384684 - 25384734
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| |||||||||||||||||||  |||||||||||||||||||    
T  25384684 aacactatggcgtaatttgatccatgtagccaacctcacttagtgggataa 25384734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 33504439 - 33504489
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| |||||||||||||| |||| |||| |||||||||||||||    
T  33504439 aacattatggcgtaatttgatccatctagccgaccccacttagtgggataa 33504489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 43573193 - 43573147
Alignment:
Q  82 ttatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||    
T  43573193 ttatggcgtaatttgatccatgtagccgaccccacttagtgggataa 43573147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 39709268 - 39709219
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggata 127  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  39709268 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggata 39709219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 440929 - 440981
Alignment:
Q  76 acaacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||||| ||||||||||||||||||| |||  ||||||| |||||||    
T  440929 acaacattatggcgtaatttgatccatgtagctgactccacttagagggataa 440981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 3635390 - 3635314
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgt 153  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||  |||||| || || |||||||||||    
T  3635390 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 3635314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 12734915 - 12734991
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa-tcttggtcgtcgtcgttgttgttgt 153  Q
    |||| ||||| ||||||||||||||||||  |||| |||||||||||||||  |||||| || || |||||||||||    
T  12734915 aacactatggtgtaatttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 12734991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 3481369 - 3481412
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagt 121  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||    
T  3481369 aacattatggcgtaatttgatccatgtagctgaccccacttagt 3481412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 9496081 - 9496128
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 125  Q
    |||||||||| |||||||||||||||||||  ||| ||||||||||||    
T  9496081 aacattatggcgtaatttgatccatgtagccaaccccacttagtggga 9496128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 45543140 - 45543089
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataat 129  Q
    |||||||||| ||| ||||||| ||||||| |||| ||||||||||||||||    
T  45543140 aacattatggcgtactttgatctatgtagccgaccccacttagtgggataat 45543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 227404 - 227454
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  227404 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 227454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 4807810 - 4807860
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  4807810 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 4807860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 11992175 - 11992125
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| || |||||||||||||||| |||| |||||||||| ||||    
T  11992175 aacattatggcgttatttgatccatgtagctgaccccacttagtggaataa 11992125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 12474994 - 12474944
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  12474994 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 12474944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 17670683 - 17670733
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  17670683 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 17670733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 28508893 - 28508943
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  28508893 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 28508943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 30306247 - 30306297
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  30306247 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 30306297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 38435167 - 38435217
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||| ||||||||||||||||||| || | |||||||||| ||||    
T  38435167 aacattatggcgtaatttgatccatgtagccgatcccacttagtggcataa 38435217  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 16521061 - 16521024
Alignment:
Q  91 aatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  16521061 aatttgatccatgtagccgaccccacttagtgggataa 16521024  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 32364988 - 32364947
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcactta 119  Q
    |||||||||| ||||||||||| ||||||| |||||||||||    
T  32364988 aacattatggtgtaatttgatcaatgtagctgacctcactta 32364947  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 546 - 596
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  546 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 596  T

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Target: scaffold0491 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 3652 - 3702
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  ||||||||||||| ||||| |||| |||||||||||||||    
T  3652 aacattatgacgtaatttgatccaagtagccgaccccacttagtgggataa 3702  T

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Target: scaffold0392 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 6839 - 6789
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    ||||||||||  ||||||||||||||||||  ||| |||||||||||||||    
T  6839 aacattatggcataatttgatccatgtagccaaccccacttagtgggataa 6789  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 28956 - 28906
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||| ||||| || |||||||||||||||| |||| |||||||||||||||    
T  28956 aacactatggcgtcatttgatccatgtagccgaccccacttagtgggataa 28906  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 58293 - 58243
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggataa 128  Q
    |||||||||  ||||||||||||||||||| ||||  ||||||||||||||    
T  58293 aacattatgtcgtaatttgatccatgtagccgacccaacttagtgggataa 58243  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 14798 - 14871
Alignment:
Q  78 aacattatggagtaatttgatccatgtagcggacctcacttagtgggat-aatcttggtcgtcgtcgttgttgt 150  Q
    |||| ||||| |||||||||||||||||||  ||| ||| ||||||||| ||||||||| || || ||||||||    
T  14798 aacactatggcgtaatttgatccatgtagccaaccccacgtagtgggataaatcttggttgttgttgttgttgt 14871  T

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