View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5035_high_5 (Length: 309)
Name: NF5035_high_5
Description: NF5035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5035_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 34829493 - 34829783
Alignment:
| Q |
1 |
aataaataatactaacaaaccatcaacttctatgtagctatattgtcaccattatacattaataatctacgaagaagtttttcacatagctaatttctgc |
100 |
Q |
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| T |
34829493 |
aataaataatactaacaaaccatcaacttctatgtagctatattgtcaccattatacattaataatctacgaagaagtttttcacatagctaatttctgc |
34829592 |
T |
|
| Q |
101 |
tcaacccagctttgtttgcatccattgccaatcgaataaaggaagagccatcaccttgcataaccaagtttggaataaattgggattcagagcttcccaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34829593 |
tcaacccagctttgtttgcatccattgccaatcgaataaaggaagagccatcaccttgcataaccaagtttggaataaattgggattcagagcttcccaa |
34829692 |
T |
|
| Q |
201 |
attatgaccaacatggtcataatttatgaaaggattgtagtattccataggaggagcttcattatcatcatggacatttccttgatttatc |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34829693 |
attatgaccaacatggtcataatttatgaaaggattgtagtattccataggaggagcttcattatcatcatggacatttccttgatttatc |
34829783 |
T |
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