View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5037_high_2 (Length: 381)
Name: NF5037_high_2
Description: NF5037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5037_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 20 - 363
Target Start/End: Complemental strand, 41604818 - 41604473
Alignment:
| Q |
20 |
aaaaaattatatattcaattaatgtgtcacgccatagtcnnnnnnnnaggcaagtgtcacgttatagtcgctacctaattctttacaattttaatgatgt |
119 |
Q |
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| T |
41604818 |
aaaaaattatatattcaattaatgtgtcacgccatagtcttttttt-aggcaagtgtcacgttatagtcgctacctaattctttacaattttaatgatgt |
41604720 |
T |
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| Q |
120 |
atttgccaattcataaagaatgccaaaatt---tttaattgatgtctacaattttaaagactaatttatctatgcactcttttagattttcactaattac |
216 |
Q |
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| T |
41604719 |
atttgtcaattcataaagaatgccaaaattacttttaattgatgtctacaattttaaagactaatttatctatgcactcttttagattttcactaattac |
41604620 |
T |
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| Q |
217 |
aaacttatgatgtgagtgcatctttttaactttgttactattattttaaacagggaagtggtggccagctatgcagaaaataccaaacatttgttcttga |
316 |
Q |
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| T |
41604619 |
aaacttatcatgtgagtgcatctttttaactttgttactattattttaaacagggaagtggtggccagctatgcagaaaaaaccaaacatttgttcttga |
41604520 |
T |
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| Q |
317 |
caataatggaagccatcctagaaagtttaggaattatggaagaggag |
363 |
Q |
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| T |
41604519 |
caataatggaagccatcctagaaagtttaggaattatggaagaggag |
41604473 |
T |
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