View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5038_low_10 (Length: 250)
Name: NF5038_low_10
Description: NF5038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5038_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 34976991 - 34977229
Alignment:
| Q |
1 |
atcacatttgtgtaaataaaagatctattttaatatgatactatcattgtatagttcatttcctcctcatacacagcaacatgattaaaaacattgaata |
100 |
Q |
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| T |
34976991 |
atcacatttgtgtaaataaaagatctattttaatatgatactatcattgtatagttcatttcctcctcatacacagcaacatgattaaaaacattgaata |
34977090 |
T |
|
| Q |
101 |
ttcatcattttatacctcgacaaaatttacaagaggaaaacagaaagttaaatattaccttgaccaagcttaaatttgaaagtggtacccctatcacggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
34977091 |
ttcatcattttatacctcgacaaaatttacaagaggaaaacagaaagttaaatattaccttgaccaagcttaaacttgaaagtggtacccctatcacggc |
34977190 |
T |
|
| Q |
201 |
tcgagtcaaatttggttccatcaagcaaaattccagtat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
34977191 |
tcgagtcaaatttggttccatcaagcaaaattccagtat |
34977229 |
T |
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