View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5039-Insertion-19 (Length: 280)
Name: NF5039-Insertion-19
Description: NF5039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5039-Insertion-19 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 8 - 280
Target Start/End: Original strand, 37661929 - 37662201
Alignment:
| Q |
8 |
atgttggtgttggtttccaatctacttcatagcatctgtagcacttggtgtcatagcaatcacttcagcaatacactcaaattccaaatcctcccctcaa |
107 |
Q |
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| T |
37661929 |
atgttggtgttggtttccaatctacttcatagcatctgtagcacttggtgtcatagctatcacctcagcaatacactcaaattccaaatcctcgcctgaa |
37662028 |
T |
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| Q |
108 |
gaaatccctccacaaactcacacactctcaacaaacgcaacagaagcactcaaaaaacaaggttttgttcttatggctgatcttcttcatcgttcaccac |
207 |
Q |
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| T |
37662029 |
gtaatcccatcacaaactcacacactctcaacaaacgcaacagaagcactcaaaaaacaaggttttgttcttatggctgatcttcttcatcgttcaccac |
37662128 |
T |
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| Q |
208 |
cattctttcttccacctaaaaactcaactttctttgccatcaaagattctgctatcaaaaacacctcactccc |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37662129 |
cattctttcttccacctaaaaactcaactttctttgccatcaaagattctgctatcaaaaacacctcactccc |
37662201 |
T |
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