View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5039_1D_low_51 (Length: 219)
Name: NF5039_1D_low_51
Description: NF5039_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5039_1D_low_51 |
 | |
|
| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0064 (1 HSPs) |
| | |
|
| [»] scaffold0051 (1 HSPs) |
| | |
|
| [»] scaffold0319 (1 HSPs) |
| | |
|
| [»] scaffold0304 (2 HSPs) |
| | |
|
| [»] scaffold0107 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 164; Significance: 8e-88; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 10787238 - 10787425
Alignment:
| Q |
20 |
atcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
10787238 |
atcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattc |
10787337 |
T |
|
| Q |
120 |
tgcaacaagccttggatggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10787338 |
tgcaacaagccttggacggtaggaatgcagggctcagggtctagcatgaactgggtacacctcagaatgcagaacatgtgatgtccat |
10787425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 14688555 - 14688368
Alignment:
| Q |
20 |
atcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
||||||||||||| |||||| |||| || ||| ||||| ||||||||||||||| || ||||| |||||||||||||||||||| |||||||| |||||| |
|
|
| T |
14688555 |
atcatgaaaaagtgtagcggtatcaggtgtgataccgtcaagcgccctcagcagcacgtcgaaatacagggcggtcacagagccagcatccatggcattc |
14688456 |
T |
|
| Q |
120 |
tgcaacaagccttggatggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
| |||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||| |
|
|
| T |
14688455 |
ttcaacaaaccttggatggtagggatgcagggctcagggtccagcatgaactgggtgcacctcaaaatgcagaacatgtgatgtccat |
14688368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 7360557 - 7360370
Alignment:
| Q |
20 |
atcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
||||||||||||| ||||| |||| || ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||| |
|
|
| T |
7360557 |
atcatgaaaaagtgcagcggcatcaggtgtgacaccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattc |
7360458 |
T |
|
| Q |
120 |
tgcaacaagccttggatggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
| ||| || |||||||||||||| | |||||||||||| ||||||||||| ||||||||||||| |||||| |||||||| ||||||| |
|
|
| T |
7360457 |
ttcaagaaaccttggatggtagggacgcagggctcaggatccagcatgaactgggtacacctcaaaatgcagaacatgtggtgtccat |
7360370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 207
Target Start/End: Complemental strand, 41375532 - 41375346
Alignment:
| Q |
21 |
tcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattct |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
41375532 |
tcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattct |
41375433 |
T |
|
| Q |
121 |
gcaacaagccttggatggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||| |
|
|
| T |
41375432 |
tcagcaagccttggacggtaggaatgcagggctcagggtccagcatgaactgggtacacctcaaaatgcagaacatatgatgtccat |
41375346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 22081094 - 22081242
Alignment:
| Q |
59 |
aagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggctcaggg |
158 |
Q |
| |
|
|||||||||||||||||| |||||||| || ||||||||||| || |||||||| || |||| | || |||| || |||||||||||| |||||| |
|
|
| T |
22081094 |
aagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagaaaacctttgacggtaggaatgcatggctcaata |
22081193 |
T |
|
| Q |
159 |
tccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
|||| ||| ||||||||||| |||| |||||||||||| |||||||||| |
|
|
| T |
22081194 |
tccaacataaattgggtacatctcaaaatgcaaaacatatgatgtccat |
22081242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 22799844 - 22799785
Alignment:
| Q |
59 |
aagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcatt |
118 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||| |||||||||| |||||||||||||| |
|
|
| T |
22799844 |
aagcgccctcagcatgacatcaaagtagagcgcgctcacagagccagcatccatagcatt |
22799785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 128; Significance: 2e-66; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 1730056 - 1730243
Alignment:
| Q |
20 |
atcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
1730056 |
atcatgaaaaagtctagcggaatcaagtctgacatcgttaagcaccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattc |
1730155 |
T |
|
| Q |
120 |
tgcaacaagccttggatggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
| || ||| ||||||| ||||||||| ||||||||||||| ||||||||| || |||||||||| |||||| ||||| |||||||||| |
|
|
| T |
1730156 |
ttcagcaaaccttggacggtaggaatacagggctcagggtacagcatgaactgagtacacctcaaaatgcagaacatatgatgtccat |
1730243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 22338640 - 22338584
Alignment:
| Q |
63 |
gccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
|||||||||| ||||| ||||| || ||| |||||||||| ||||||||||||||| |
|
|
| T |
22338640 |
gccctcagcatgacatcaaagtagagcgcgctcacagagccagcatccatagcattc |
22338584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 14329086 - 14328899
Alignment:
| Q |
20 |
atcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
||||||||||||| |||||| |||| || ||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||| |
|
|
| T |
14329086 |
atcatgaaaaagtgtagcggcatcaggtgtgataccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattc |
14328987 |
T |
|
| Q |
120 |
tgcaacaagccttggatggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
| || ||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
14328986 |
ttcagcaaaccttagatggtagggatgcagggctcagggtccagcatgaactgggtacacctcaaaatgcagaacatgtgatgtccat |
14328899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 18166688 - 18166544
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggc |
152 |
Q |
| |
|
||||| |||||| ||||||| |||||| ||||| || ||||||||||| || ||||||||||| ||| | ||| | | || |||||||||||| ||| |
|
|
| T |
18166688 |
accgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgcttgacggtaggaatgcatggc |
18166589 |
T |
|
| Q |
153 |
tcagggtccagcatgaattgggtacacctcagaatgcaaaacatg |
197 |
Q |
| |
|
||| |||||||||||||| || || |||| ||||||||||||| |
|
|
| T |
18166588 |
tcaacatccagcatgaattgagtgcatctcaaaatgcaaaacatg |
18166544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 112; Significance: 9e-57; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 24954790 - 24954977
Alignment:
| Q |
20 |
atcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
||||||||||||| |||||| |||| || ||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||| |
|
|
| T |
24954790 |
atcatgaaaaagtgtagcggcatcaggtgtgataccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattc |
24954889 |
T |
|
| Q |
120 |
tgcaacaagccttggatggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgatgtccat |
207 |
Q |
| |
|
| || |||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||| |||||| |||||||| ||||||| |
|
|
| T |
24954890 |
ttcagcaagccttggatggtagggatgcaaggctcagggtccaacatgaactgggtacacctcaaaatgcagaacatgtgttgtccat |
24954977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 23195911 - 23195767
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggc |
152 |
Q |
| |
|
||||| |||||| ||||||| |||||| ||||| || ||||||||||| || |||||||||| ||| | ||| | | || |||||||||||| ||| |
|
|
| T |
23195911 |
accgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagtgttcctaagcaaacacttgacggtaggaatgcatggc |
23195812 |
T |
|
| Q |
153 |
tcagggtccagcatgaattgggtacacctcagaatgcaaaacatg |
197 |
Q |
| |
|
||| ||||||||||||||| || || |||| ||||||||||||| |
|
|
| T |
23195811 |
tcaacgtccagcatgaattgagtgcatctcaaaatgcaaaacatg |
23195767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 23621515 - 23621371
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggc |
152 |
Q |
| |
|
||||| |||||| ||||||| |||||| ||||| || ||||||||||| || ||||||||||||||| | ||| | || | |||||||||||| ||| |
|
|
| T |
23621515 |
accgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcattcctaagcaaacgtttaacggtaggaatgcatggc |
23621416 |
T |
|
| Q |
153 |
tcagggtccagcatgaattgggtacacctcagaatgcaaaacatg |
197 |
Q |
| |
|
||| || ||||||||||| || || |||| ||| ||||||||| |
|
|
| T |
23621415 |
tcaatatctagcatgaattgagtgcatctcaaaatacaaaacatg |
23621371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 197
Target Start/End: Original strand, 39027 - 39171
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggc |
152 |
Q |
| |
|
||||| |||||| ||||||| |||||| ||||| || ||||||||||| || ||||||||||| ||| | ||| | || || |||||||||||| ||| |
|
|
| T |
39027 |
accgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgtttgacggtaggaatgcatggc |
39126 |
T |
|
| Q |
153 |
tcagggtccagcatgaattgggtacacctcagaatgcaaaacatg |
197 |
Q |
| |
|
|| |||| ||||||||| || || |||| ||||||||||||| |
|
|
| T |
39127 |
tcgacatccaacatgaattgagtgcatctcaaaatgcaaaacatg |
39171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 32711 - 32567
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggc |
152 |
Q |
| |
|
||||| |||||| ||||||| |||||| ||||| || ||||||||||| || ||||||||||| ||| | ||| | || || |||||||||||| ||| |
|
|
| T |
32711 |
accgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgtttgacggtaggaatgcatggc |
32612 |
T |
|
| Q |
153 |
tcagggtccagcatgaattgggtacacctcagaatgcaaaacatg |
197 |
Q |
| |
|
|| |||| ||||||||| || || |||| ||||||||||||| |
|
|
| T |
32611 |
tcgacatccaacatgaattgagtgcatctcaaaatgcaaaacatg |
32567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 74533 - 74699
Alignment:
| Q |
35 |
agcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttgg |
134 |
Q |
| |
|
||||| |||| || ||| ||||| ||| || |||| || |||||| ||||| || ||||||||||| || ||||||||||| |||| | ||| | | |
|
|
| T |
74533 |
agcggtatcaggtgtgataccgtcaagtgctctcaccattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcttaagcaaatgcttg |
74632 |
T |
|
| Q |
135 |
atggtaggaatgcagggctcagggtccagcatgaattgggtacacctcagaatgcaaaacatgtgat |
201 |
Q |
| |
|
| |||||||||||| |||||| || |||||||||||||| || |||| |||||||||||| |||| |
|
|
| T |
74633 |
acggtaggaatgcatggctcaacatctagcatgaattgggtgcatctcaaaatgcaaaacatatgat |
74699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 14562292 - 14562148
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggc |
152 |
Q |
| |
|
||||| || ||||||||||| |||||| ||||| || ||| |||||||||| || |||||||||||| | ||| | | || |||||||||||| ||| |
|
|
| T |
14562292 |
accgtcaatcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcattcctaagcaaacgcttgacggtaggaatgcatggc |
14562193 |
T |
|
| Q |
153 |
tcagggtccagcatgaattgggtacacctcagaatgcaaaacatg |
197 |
Q |
| |
|
||| ||||||||| ||| ||||| |||| ||| ||||||||| |
|
|
| T |
14562192 |
tcaacatccagcatgtgttgagtacatctcaaaatacaaaacatg |
14562148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 13284434 - 13284372
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagc |
115 |
Q |
| |
|
||||| |||||||||||||| |||||| ||||| || ||| |||||||||| || |||||||| |
|
|
| T |
13284434 |
accgtcaagcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagc |
13284372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 14742016 - 14741960
Alignment:
| Q |
59 |
aagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagc |
115 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||| |||||||||| ||||||||||| |
|
|
| T |
14742016 |
aagcgccctcagcatgacatcaaagtagagcgcgctcacagagccagcatccatagc |
14741960 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 13680 - 13823
Alignment:
| Q |
53 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattctgcaacaagccttggatggtaggaatgcagggc |
152 |
Q |
| |
|
||||| || ||||||||||| |||||| ||||| || ||| |||||||||| || |||||||||||| | ||| | | || |||||||||||| ||| |
|
|
| T |
13680 |
accgtcaatcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcattcctaagcaaacgcttgacggtaggaatgcatggc |
13779 |
T |
|
| Q |
153 |
tcagggtccagcatgaattgggtacacctcagaatgcaaaacat |
196 |
Q |
| |
|
||| ||||||||| ||| ||||| |||| ||| |||||||| |
|
|
| T |
13780 |
tcaacatccagcatgtgttgagtacatctcaaaatacaaaacat |
13823 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 12336 - 12276
Alignment:
| Q |
59 |
aagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||| |||||||||| || |||||||||||| |
|
|
| T |
12336 |
aagcgccctcagcattacatgaaagtaaagagcgctcacagagccagcgtccatagcattc |
12276 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 18087 - 18027
Alignment:
| Q |
59 |
aagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||| |||||||||| || |||||||||||| |
|
|
| T |
18087 |
aagcgccctcagcattacatgaaagtaaagagcgctcacagagccagcgtccatagcattc |
18027 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 9280 - 9340
Alignment:
| Q |
59 |
aagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
|||||||||||||| | ||| ||||| || ||| |||| ||||||||||||||||||||| |
|
|
| T |
9280 |
aagcgccctcagcatgatatcaaagtagagtgcgctcacggagccggcatccatagcattc |
9340 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 384862 - 384922
Alignment:
| Q |
59 |
aagcgccctcagcagtacatcgaagtacagggcggtcacagagccggcatccatagcattc |
119 |
Q |
| |
|
||||||||||| || ||||| ||||| || || |||||||||||||||||||||||||| |
|
|
| T |
384862 |
aagcgccctcaacatgacatcaaagtagagctcgctcacagagccggcatccatagcattc |
384922 |
T |
|
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