View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5039_1D_low_65 (Length: 206)
Name: NF5039_1D_low_65
Description: NF5039_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5039_1D_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 10976173 - 10975974
Alignment:
| Q |
1 |
atccactgcagcacaaaccaagaaaaaccaagcaacgatgtaaactcaaatctaaaagcattctcagcagcactagcactctcatcaatcctcatctcat |
100 |
Q |
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| T |
10976173 |
atccactgcagcacaaaccaagaaaaaccaaccaacgatgtaaactcaaatctaaaagcattctcagcagcactagcactctcatcaatcctcatctcat |
10976074 |
T |
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| Q |
101 |
caccactccccgctgtcgccgacatctccggtctaacaccatgcagagaatcaaaacaattcgccaagcgtgagaaacaatcaatcaaaaagcttgaatc |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
10976073 |
caccactccccgctgtcgccgacatctccggcctaacaccatgcagagaatcaaaacaattcgccaaacgtgagaaacaatcaatcaaaaagcttgaatc |
10975974 |
T |
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