View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5042-Insertion-13 (Length: 308)
Name: NF5042-Insertion-13
Description: NF5042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5042-Insertion-13 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 7 - 292
Target Start/End: Complemental strand, 9661937 - 9661651
Alignment:
| Q |
7 |
agttgccaactgggtcggcaccaacgtggcttctgctttctttgcttccttggaacgttgttcttgcatcaaccttaccaccactgacattgaagatgat |
106 |
Q |
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| T |
9661937 |
agttgccaactgggtcggcaccaacgtggcttctgctttctttgcttccttggaacgttgttcttgcatcaaccttaccaccactgacattgaagatgat |
9661838 |
T |
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| Q |
107 |
aacaacaacgatgatcttcctctcatggttactaagcctgtttctcatcttccttttgagggtcccaccacttctcttccttcaaaatccaaccttcgtt |
206 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9661837 |
aacaacaacgatgatcttcctctcatggttactacccctgtttctcatcttccttttgagggtcccaccacttctcttccttcaaaatccaaccttcgtt |
9661738 |
T |
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| Q |
207 |
cttgatctcttttt-ggtttgtaatattaactctttgtgttattgggttctttagttattcatcttgtcatcatcaaaatttagtct |
292 |
Q |
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|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9661737 |
cttgatctctttttcggtttgtaatattaactctttgtgttcttgggttctttagttattcatcttgtcatcatcaaaatttagtct |
9661651 |
T |
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