View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5042-Insertion-14 (Length: 320)
Name: NF5042-Insertion-14
Description: NF5042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5042-Insertion-14 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 47456860 - 47456548
Alignment:
| Q |
8 |
aaaaagatgttattctgattgaacatatacacacaccttgatatttctaaacagaaactaattattaatcgtctatatttcgcgactcatatattacctt |
107 |
Q |
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| T |
47456860 |
aaaaagatgttattctgattgaacatatacacacaccttgatatttctaaacagaaactaattattaatcgtctatatttcgcgactcatatattacctt |
47456761 |
T |
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| Q |
108 |
gatttggagctgcagaaatttcacatattggattgcatcttcaagcattgtgcttatatcaacctgtatgaccatcccatatatgaaattatacatctct |
207 |
Q |
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| T |
47456760 |
gatttggagctgcagaaatttcacatattggattgcatcttcaagcattgtgcttatatcaacctgtatgaccatcccatatgtgaaattatacatctct |
47456661 |
T |
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| Q |
208 |
caaatagttacaagcccctttaaactgaaaaacattcatgcaaaaataagttacctttgttccatttggtacaagattctgcagagttctcagtctctcg |
307 |
Q |
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| T |
47456660 |
caaatagttacaagcccctttaaactgaaaaacattcatgcaaaaataagttacctttgttccatttggtacaagattctgcagagttctcagtctctcg |
47456561 |
T |
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| Q |
308 |
tttatcttctccc |
320 |
Q |
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||||||||||||| |
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| T |
47456560 |
tttatcttctccc |
47456548 |
T |
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