View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5042_high_34 (Length: 244)
Name: NF5042_high_34
Description: NF5042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5042_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 9662150 - 9661932
Alignment:
| Q |
10 |
taaaattcaattcaatatattcttttcttttcccttttccttcacaaaacacgtttccaacaaaattcccctgtcccatacctccacaaacaaaactcca |
109 |
Q |
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| T |
9662150 |
taaaattcaattcaatatatacttttcttttcccttttccttcacaaaacacgtttccaacaaaattcccctgtcccatacctccacaaacaaaactcca |
9662051 |
T |
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| Q |
110 |
acctctctctgtattcatcttgtttgctacaaattccattccaaaccttcaacaatgtccaacaacagcaacaacaacgcatgtgggttgatatcatgcg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9662050 |
acctctctctgtattcatcttgtttgctacaaattccattccaaaccttcaacaatgtccaacaacagcaacaacaacgcatgtgggttgatatcatgcg |
9661951 |
T |
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| Q |
210 |
acaaacttgacagagttgc |
228 |
Q |
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| T |
9661950 |
acaaacttgacagagttgc |
9661932 |
T |
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