View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5042_low_32 (Length: 249)
Name: NF5042_low_32
Description: NF5042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5042_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26518323 - 26518091
Alignment:
| Q |
1 |
aaaaagggttttgctaaatatttgccagggacgataattgtaaggcactaatctaagttcatttaactatgtgataaatcaaattgctttcagaaattca |
100 |
Q |
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| T |
26518323 |
aaaaagggtgttgctaaatatttgccagggacgataattgtaaggcactaatctaagttcatttaactatgtgacaaatcaaattgctttcagaaattca |
26518224 |
T |
|
| Q |
101 |
atcattccaaaatcaaaaccgacatagaaaattggtaaaatggtaaattgaatacttatttgactttatgtacaaccatgacaaatatttcttggtcaca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26518223 |
atcattccaaaatcaaaaccgacatagaaaattggtaaaatggtaaattaaatacttatttgactttatgtacaaccatgacaaatatttcttggtcaca |
26518124 |
T |
|
| Q |
201 |
ccattcagttcgatatctaaacatgaacaaaag |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
26518123 |
ccattcagttcgatatctaaacatgaacaaaag |
26518091 |
T |
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