View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5043-Insertion-1 (Length: 1180)
Name: NF5043-Insertion-1
Description: NF5043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5043-Insertion-1 |
 |  |
|
| [»] scaffold0188 (1 HSPs) |
 |  |  |
|
| [»] scaffold0118 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 391; Significance: 0; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 8 - 590
Target Start/End: Original strand, 39613839 - 39614420
Alignment:
| Q |
8 |
atacctacaaatactttgatactcaaatatgcacttaatcaagcccataaattaagtttcgaagtcgaaagagtggctattgtgannnnnnnncttattg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||| ||||||| |
|
|
| T |
39613839 |
atacctacaaatactttgatactcaaatatgcacttaatcaagcccataaattacgttttgaagtcgaaagagtagttattgtgattatttttcttattg |
39613938 |
T |
 |
| Q |
108 |
attaagtttagggataaatattcttcccgtgcttacaaagtttgtgataattcgtttaatcattatgctatattgaccagtgat-caaaagtgaggcgct |
206 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | | | ||||||||| ||||| |
|
|
| T |
39613939 |
attaagtttagggataaatattcttctggtgcttacaaaatttgtgataattcgtttaatcattatgctatattgaccgggggttcaaaagtgaagcgct |
39614038 |
T |
 |
| Q |
207 |
cnnnnnnnncatttaatttggtttatatgtgtgtgagttatctggcaagagtgaaatgacagggtttttaaccatacggagaaattgatgtctcaactgc |
306 |
Q |
| |
|
| |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
39614039 |
cttttttt-catttaatttggtttacatgtgtgtgagttatatggcaagagcgaaatgacagggtttttaatcatacggagaaattgatgtctcaactgc |
39614137 |
T |
 |
| Q |
307 |
ttgataaggttaaatatttgtttttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttgattgta |
406 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
39614138 |
ttgataaggttaaatatttatctttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgctggttggtggcagcgccccctttgattgtc |
39614237 |
T |
 |
| Q |
407 |
tgggtgttgtttaattgtattgttttgtttcttttttatccgtgctctaaatctttaatgtgtgctgattttttgttatgtgtatttgaattctttgctt |
506 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
39614238 |
tgggtgttgtttaattgtattgttttgtttcttttttatccgtgctctaaatctttaatgtgtattgggttttt-ttatgtgtatttgaattctttgctt |
39614336 |
T |
 |
| Q |
507 |
gaagcataagactggaaatgtttctcttgagtttgttggtcggtgacagcgcctctttaattgtcagattgttgattaattgta |
590 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| ||||||||| |||| |||||||||| |
|
|
| T |
39614337 |
gaagcataagactgcaaatgtttctcttgagtttgttggtcggtggcaacgcctctttgattgtcagagtgttaattaattgta |
39614420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 804 - 927
Target Start/End: Original strand, 39614742 - 39614868
Alignment:
| Q |
804 |
acttagcccctttgtgaaaaatcatataacttcactaccactccctcgatttc-ttttaactgtcgttttggta-tttaaagttacgatttgtcaattat |
901 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
39614742 |
acttagtccctttgtgaaaaatcatataacttcactaccactccctcgatttctttttaactgtcgttttggtattttaaagatacgatttgtcaattat |
39614841 |
T |
 |
| Q |
902 |
atcctttg-taattactcttatctttt |
927 |
Q |
| |
|
|||||||| |||||||||||||||||| |
|
|
| T |
39614842 |
atcctttgttaattactcttatctttt |
39614868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 655 - 722
Target Start/End: Original strand, 39614485 - 39614552
Alignment:
| Q |
655 |
aactctttactttttctcggtacaccttgtgctgagaatgtgacttttcgtggtgtttttgacttgtt |
722 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39614485 |
aactctttactttttctcggtacaccttgtgctgagaatgtgacttttcgtggtatttttgacttgtt |
39614552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 340 - 502
Target Start/End: Original strand, 39614336 - 39614492
Alignment:
| Q |
340 |
tgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttgattgtatgggtgttgtttaattgtattgttttgtttctt |
439 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||||| | || |||||||||| | ||||| ||||||||||||||||| || |
|
|
| T |
39614336 |
tgaagcataagactgcaaatgtttctcttgagtttgttggtcggtggcaacg-cctctttgattgtcagagtgttaattaattgtattgttttg----tt |
39614430 |
T |
 |
| Q |
440 |
ttttatccgtgctctaaatctttaatgtgtgctgattttttgttatgtgtatttgaattcttt |
502 |
Q |
| |
|
||||||| ||||||| |||| |||||| ||| || ||||||||| | |||||||||| ||||| |
|
|
| T |
39614431 |
ttttatcagtgctct-aatcattaatgggtgttggttttttgttttatgtatttgaactcttt |
39614492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 858 - 922
Target Start/End: Complemental strand, 36060313 - 36060247
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttat |
922 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
36060313 |
tttaactgtcgttttggtattttaagtgtacgatttgtcgattataccctttgtcaattactcttat |
36060247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 36437465 - 36437394
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||| ||||||||||||||| | ||||||||||||||||| |
|
|
| T |
36437465 |
tttaactgtctttttggtattttaagcgtacgatttttcaattatatcctttatcaattactcttatctttt |
36437394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 27984439 - 27984349
Alignment:
| Q |
304 |
tgcttgataaggttaaatatttgtttttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcc |
394 |
Q |
| |
|
|||| |||||||| |||||| ||| ||| | ||||||||||||||| | ||| ||| ||| ||||||||| |||||||||||||||||| |
|
|
| T |
27984439 |
tgctcgataaggtcaaatatgtgtctttctcgtggctgaagcataatgctgcatttgtatcttttgagtttgctggttggtggcagcatcc |
27984349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 19803624 - 19803694
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||||| ||||||| ||||||| ||||||||| |
|
|
| T |
19803624 |
tttaactgtc-ttttggtattttaagggtacgatttgtcaattataccctttgtcaattacttttatctttt |
19803694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 858 - 926
Target Start/End: Complemental strand, 42674211 - 42674141
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatcttt |
926 |
Q |
| |
|
|||||||||| |||||||| ||||| | ||| |||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
42674211 |
tttaactgtctttttggtattttaagggtacaatttgtcaatgataccctttgtcaattactcttatcttt |
42674141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 101; Significance: 2e-49; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 219 - 446
Target Start/End: Complemental strand, 4111173 - 4110946
Alignment:
| Q |
219 |
ttaatttggtttatatgtgtgtgagttatctggcaagagtgaaatgacaggg-tttttaaccatacggagaaattgatgtctcaactgcttgataaggtt |
317 |
Q |
| |
|
||||||||||||| |||||||| ||||| ||||||||||||||||| |||| ||||||| |||| |||||| || ||| ||| | ||| | |||||| |
|
|
| T |
4111173 |
ttaatttggtttacttgtgtgtgggttatttggcaagagtgaaatgataggggtttttaatcataaggagaagtttatgcatcagtttcttaacaaggtt |
4111074 |
T |
 |
| Q |
318 |
aaatatttgtttttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttgattgtatgggtgttgtt |
417 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| | | ||||||||||||||||||||||||||||||||| || ||| ||||||||| |||| | || | |
|
|
| T |
4111073 |
aaatatttgtctttgtggtgggtgaagcataatgctgaaaatgtttctcttgagtttgttggttggtggcaaca-cccttttgattgtttgggcggtggt |
4110975 |
T |
 |
| Q |
418 |
taattgtattgttttgtttcttttttatc |
446 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4110974 |
taattgtattgttttgtttcttttttatc |
4110946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 219 - 429
Target Start/End: Complemental strand, 9371909 - 9371700
Alignment:
| Q |
219 |
ttaatttggtttatatgtgtgtgagttatctggcaagagtgaaatgacagggtttttaaccatacggagaaattgatgtctcaactgcttgataaggtta |
318 |
Q |
| |
|
||||||||||||| | |||||| |||||||| ||||| ||||||| | |||||| |||| ||| ||| ||||| |||| ||||| |||| |||| |
|
|
| T |
9371909 |
ttaatttggtttacctatgtgtgggttatctgacaagaccaaaatgacctagcttttaatcataaggataaaatgatgcatcaattgcttaataaagtta |
9371810 |
T |
 |
| Q |
319 |
aatatttgtttttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttgattgtatgggtgttgttt |
418 |
Q |
| |
|
||||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||| || |||||||||||| ||||||||||||| || |||||| | |
|
|
| T |
9371809 |
aatatttgtctttgtggttgctgaagcataagaccgcaaatgtttctattgagtttgctgcttggtggcagca-cccctttgattgtctgtgtgttggat |
9371711 |
T |
 |
| Q |
419 |
aattgtattgt |
429 |
Q |
| |
|
|||||| |||| |
|
|
| T |
9371710 |
aattgtgttgt |
9371700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 3741575 - 3741645
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||||| | ||||| | |||||| |||||||| |
|
|
| T |
3741575 |
tttaactgtcgttttggtattttaaagtacgatttgtcaattataccatttgtcagttactcgtatctttt |
3741645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 14896594 - 14896665
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| |||||||| ||||| || | |||||||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
14896594 |
tttaactgtcattttggtattttaaggtgatgatttgtcaaatatatcatttgtcaattactcttatctttt |
14896665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 32233593 - 32233664
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| | ||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
32233593 |
tttaactgtctttttggtattttaagggtgtgatttgtcaattataccctttgtcaattactcttatctttt |
32233664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 862 - 927
Target Start/End: Original strand, 34146152 - 34146219
Alignment:
| Q |
862 |
actgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
34146152 |
actgtctttttggtattttaagggtacgatttgtcaattatactctttgtcaattactcttatctttt |
34146219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 900
Target Start/End: Complemental strand, 43026810 - 43026767
Alignment:
| Q |
858 |
tttaactgtcgttttggtattt-aaagttacgatttgtcaatta |
900 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
43026810 |
tttaactgtcgttttagtattttaaagttacgatttgtcaatta |
43026767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 858 - 926
Target Start/End: Complemental strand, 29316016 - 29315946
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaag-ttacgatttgtcaattatatcctttgt-aattactcttatcttt |
926 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||| ||||||||| ||||||| |||||||| ||||||| |
|
|
| T |
29316016 |
tttaactgtcgttttagtattttaagagtacgatttttcaattataccctttgtcaattactcgtatcttt |
29315946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 29937350 - 29937384
Alignment:
| Q |
506 |
tgaagcataagactggaaatgtttctcttgagttt |
540 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29937350 |
tgaagcataagactgtaaatgtttctcttgagttt |
29937384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 506 - 551
Target Start/End: Complemental strand, 4111051 - 4111006
Alignment:
| Q |
506 |
tgaagcataagactggaaatgtttctcttgagtttgttggtcggtg |
551 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||| |||| |
|
|
| T |
4111051 |
tgaagcataatgctgaaaatgtttctcttgagtttgttggttggtg |
4111006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 79; Significance: 2e-36; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 236 - 390
Target Start/End: Complemental strand, 28453587 - 28453433
Alignment:
| Q |
236 |
tgtgtgagttatctggcaagagtgaaatgacagggtttttaaccatacggagaaattgatgtctcaactgcttgataaggttaaatatttgtttttgtgg |
335 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| ||||||||| ||| |||||| | |||| |||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
28453587 |
tgtgtgggttatctgacaagagtgaaatgacatggtttttaatcattaggagaagtcgatgcctcagttacttgataaggttaaatatttgtctttgtgg |
28453488 |
T |
 |
| Q |
336 |
tggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagc |
390 |
Q |
| |
|
|||||||||||||||| | ||||||||||||| |||||| |||| ||||||||| |
|
|
| T |
28453487 |
tggctgaagcataaggctggaaatgtttctcttaagtttgatggtcggtggcagc |
28453433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 222 - 425
Target Start/End: Original strand, 17401042 - 17401244
Alignment:
| Q |
222 |
atttggtttatatgtgtgtgagttatctggcaagagtgaaatgacagggtttttaaccatacggagaaattgatgtctcaactgcttgataaggttaaat |
321 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||| ||||| | | ||||| |||| ||||||||||||| || || || |||||||||||||| |
|
|
| T |
17401042 |
atttggtttaccggtgtgtgggttatctggcaagagtgaactgacaagttgtttaatcataaggagaaattgatgccttaattgtttgataaggttaaac |
17401141 |
T |
 |
| Q |
322 |
atttgtttttgtggtg-gctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttgattgtatgggtgttgtttaa |
420 |
Q |
| |
|
|||||| ||||||||| ||||||| ||| | |||||||||||||||||||||| | |||||||| ||| ||||||||||||| || |||||| |||| |
|
|
| T |
17401142 |
atttgtctttgtggtgacctgaagcgtaaaggtgcaaatgtttctcttgagtttgctagttggtgggagc--cccctttgattgtttgagtgttggttaa |
17401239 |
T |
 |
| Q |
421 |
ttgta |
425 |
Q |
| |
|
||||| |
|
|
| T |
17401240 |
ttgta |
17401244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 236 - 445
Target Start/End: Complemental strand, 35947458 - 35947250
Alignment:
| Q |
236 |
tgtgtgagttatctggcaagagtgaaatgacagggtttttaaccatacggagaaattgatgtctcaactgcttgataaggttaaatatttgtttttgtgg |
335 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||| ||| ||| |||| || |||||| || |||||| |||||||||||||| ||||||| |
|
|
| T |
35947458 |
tgtgtgagttatctgacaagagtgaaatgacaggttttttaattataaggaaaaatcgacgtctcagttgtttgatatggttaaatatttgtctttgtgg |
35947359 |
T |
 |
| Q |
336 |
tggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttgattgtatgggtgttgtttaattgtattgttttgtt |
435 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||| ||||||||||| ||| |||||| | ||||||||| ||||||||| ||||||||| |
|
|
| T |
35947358 |
tggctgaagcataagactttaaatgtttcagttgagtttgccaattggtggcagc-ccccttttgatcatttgggtgttggttaattgtaatgttttgtt |
35947260 |
T |
 |
| Q |
436 |
tcttttttat |
445 |
Q |
| |
|
|||||||||| |
|
|
| T |
35947259 |
tcttttttat |
35947250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 36320092 - 36320022
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
36320092 |
tttaactgtctttttggtattttaaggtacgatttgtcaattataccatttgtcaattactcttatctttt |
36320022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 506 - 564
Target Start/End: Complemental strand, 28453483 - 28453425
Alignment:
| Q |
506 |
tgaagcataagactggaaatgtttctcttgagtttgttggtcggtgacagcgcctcttt |
564 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||| ||||||||| ||||||| |||| |
|
|
| T |
28453483 |
tgaagcataaggctggaaatgtttctcttaagtttgatggtcggtggcagcgccccttt |
28453425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 52414878 - 52414949
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
52414878 |
tttaactgtcgttttggtattttaagggtatgatttgtcaattataacctttgtcaattactcgtatctttt |
52414949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 23699578 - 23699507
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||| |||||||| |||||| ||| |||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
23699578 |
tttaacagtcgtttttgtattttaaggatacgatttgtcaattataccctttgtcaattactcgtatctttt |
23699507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 856 - 927
Target Start/End: Complemental strand, 1674894 - 1674822
Alignment:
| Q |
856 |
cttttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||||||||||||| ||| ||||| | |||||||||||||||||| ||||||| ||||| |||||| |||| |
|
|
| T |
1674894 |
cttttaactgtcgttttagtattttaagggtacgatttgtcaattata-cctttgtcaattattcttatatttt |
1674822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 48; Significance: 8e-18; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 330 - 401
Target Start/End: Complemental strand, 22601014 - 22600943
Alignment:
| Q |
330 |
ttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttga |
401 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
22601014 |
ttgtggtggctgaagcataaggttgcaaataattcttttgagtttgttggttggtggcagcgtcccttttga |
22600943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 5493516 - 5493587
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
5493516 |
tttaactgtctttttggtattttaagggtacgatttgtcaattataccctttgtcaattactcttatctttt |
5493587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 858 - 923
Target Start/End: Complemental strand, 25342500 - 25342433
Alignment:
| Q |
858 |
tttaactgtcgttttggtattt-aaagttacgatttgtcaattatatcctttgt-aattactcttatc |
923 |
Q |
| |
|
|||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
25342500 |
tttaaccgtcgttttggtattttaaaggtacgatttgtcaattatatcctttgtcaattacttttatc |
25342433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 45646563 - 45646634
Alignment:
| Q |
858 |
tttaactgtcgttttggtattt-aaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| |||| |||||||||||||||||| ||||||| ||||||| || |||||| |
|
|
| T |
45646563 |
tttaactgtctttttggtattttaaaggtacgatttgtcaattataccctttgtcaattacttttttctttt |
45646634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 862 - 909
Target Start/End: Complemental strand, 37031084 - 37031037
Alignment:
| Q |
862 |
actgtcgttttggtatttaaagttacgatttgtcaattatatcctttg |
909 |
Q |
| |
|
|||||| ||||||||||| || ||||||||||||||||||| |||||| |
|
|
| T |
37031084 |
actgtctttttggtattttaaattacgatttgtcaattataccctttg |
37031037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 858 - 929
Target Start/End: Complemental strand, 21959804 - 21959731
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatcttttca |
929 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||| ||||||||| ||||||| ||||| |||||| |||||| |
|
|
| T |
21959804 |
tttaactgtcgttttggtattttaagggtatgatttatcaattataccctttgtcaattattcttatattttca |
21959731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 858 - 910
Target Start/End: Original strand, 34668645 - 34668698
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt |
910 |
Q |
| |
|
|||||||||| |||| |||||| |||| |||||||||||||||||| ||||||| |
|
|
| T |
34668645 |
tttaactgtctttttagtattttaagtgtacgatttgtcaattataccctttgt |
34668698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 15507416 - 15507486
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||||||| |||||||||||| | || ||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
15507416 |
tttaactgtcgatttggtatttaagggtatgatttgtcaattataccctttgtcaattactcttatctttt |
15507486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 16597474 - 16597552
Alignment:
| Q |
307 |
ttgataaggttaaatatttgtttttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtg |
385 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||||| |||||| | |||||||||||||||||||| ||||||||| |
|
|
| T |
16597474 |
ttgataaagttaaatatttgtctttgtggtgactgaaacataagattataaatgtttctcttgagtttgctggttggtg |
16597552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 11074080 - 11074009
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| ||| |||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
11074080 |
tttaactgtctttttggtattttaagggtacaatttgtcaattataccctttgtcaattactcttatctttt |
11074009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 4316661 - 4316733
Alignment:
| Q |
858 |
tttaactgtcgttttggtattt--aaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||||||||||||||| || | | ||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
4316661 |
tttaactgtcgttttggtatttttaaggatgtgatttgtcaattatatcttttgtcaattactcttatctttt |
4316733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 944
Target Start/End: Complemental strand, 150402 - 150313
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatcttttca--caaactaattaatgt |
944 |
Q |
| |
|
|||||||||| |||||||| ||||| | ||||||| |||||||||| ||||||| |||||||||||| |||||| |||||||||||||| |
|
|
| T |
150402 |
tttaactgtctttttggtattttaagggtacgattcgtcaattataccctttgtcaattactcttat-ttttcaataaaactaattaatgt |
150313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 25965998 - 25965927
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||| |||||||||||||| ||| ||||||||||||| |||| ||||||| |||||||||||| |||| |
|
|
| T |
25965998 |
tttaactatcgttttggtattttaagggtacgatttgtcaactataccctttgtcaattactcttatatttt |
25965927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 877 - 927
Target Start/End: Original strand, 44898095 - 44898146
Alignment:
| Q |
877 |
tttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||| |||||||| ||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
44898095 |
tttaaaggtacgatttttcaattataccctttgtcaattactcttatctttt |
44898146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 394
Target Start/End: Original strand, 6452418 - 6452592
Alignment:
| Q |
219 |
ttaatttggttta-tatgtgtgtgagttatctggcaagagtgaaatgacagggtttttaaccatacggagaaattgatgtctcaactgcttgataaggtt |
317 |
Q |
| |
|
||||||||||||| ||| |||||| ||||| |||||||| | ||||| || ||||||||||| | | |||||| ||| || || |||| ||||| || |
|
|
| T |
6452418 |
ttaatttggtttactat-tgtgtgggttatttggcaagaacgtaatgatagtgtttttaaccaaaggaagaaatcgatatcacat-tgctggataacgtc |
6452515 |
T |
 |
| Q |
318 |
aaatatttgtttttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcc |
394 |
Q |
| |
|
|||||| ||| ||| ||||||||||||||||| || ||| |||||| |||| |||| |||||||||||||||||| |
|
|
| T |
6452516 |
aaatatgtgtctttatggtggctgaagcataacgttgcattcgtttcttttgattttgatggttggtggcagcatcc |
6452592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 857 - 927
Target Start/End: Original strand, 37124136 - 37124208
Alignment:
| Q |
857 |
ttttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||| || ||||||||||| ||| ||| |||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
37124136 |
ttttaactttctttttggtattttaagggtacaatttgtcaattataccctttgtaaattactcttatctttt |
37124208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 3835788 - 3835717
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||||| ||| ||| ||| ||||||||||||| |
|
|
| T |
3835788 |
tttaactgtctttttggtattttaagggtacgatttgtcaattataccctctgtcaatcactcttatctttt |
3835717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 14771533 - 14771462
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||||||| ||||||| ||||| |||||| |||| |
|
|
| T |
14771533 |
tttaactgtcgttttggtattttaagggtatgatttgtcaattataccctttgtcaattattcttatatttt |
14771462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 15221985 - 15221914
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||||||| ||||||| ||||| |||||| |||| |
|
|
| T |
15221985 |
tttaactgtcgttttggtattttaagggtatgatttgtcaattataccctttgtcaattattcttatatttt |
15221914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 15643298 - 15643369
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||||||||||||||| ||||| | |||||||| ||||||||| ||||| | |||||||||||| |||| |
|
|
| T |
15643298 |
tttaactgtcgttttggtattttaagggtacgatttctcaattataccctttatcaattactcttatttttt |
15643369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 35793234 - 35793163
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| | ||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
35793234 |
tttaactgtctttttggtattttaagggtgtgatttgtcaattataccctttgtcaattactcttatctttt |
35793163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 859 - 927
Target Start/End: Original strand, 4567280 - 4567350
Alignment:
| Q |
859 |
ttaactgtcgttttggtatttaaag-ttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
||||||||| ||||||||||| ||| |||||||||||| |||||| ||||||| || |||| ||||||||| |
|
|
| T |
4567280 |
ttaactgtctttttggtattttaaggttacgatttgtcgattataccctttgtcaactacttttatctttt |
4567350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 889 - 927
Target Start/End: Original strand, 16196781 - 16196819
Alignment:
| Q |
889 |
atttgtcaattatatcctttgtaattactcttatctttt |
927 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
16196781 |
atttgtcaattataccctttgtcattactcttatctttt |
16196819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 3374669 - 3374786
Alignment:
| Q |
319 |
aatatttgtttttgtggtggctgaagcataaggtcgcaaatgtttctcttgagtttgttggttggtggcagcatcccctttgattgtatgggtgttgttt |
418 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||| | ||| | |||||||||| ||||||||| || |
|
|
| T |
3374669 |
aatatttgtttttgtggtggctgaggcataagggtgcagatgtttctcttga--------gttggtcggagcgt--tctttgattgtttgggtgttgctt |
3374758 |
T |
 |
| Q |
419 |
aattgtattgttttgtttcttttttatc |
446 |
Q |
| |
|
|||||||||||| | ||||||||||||| |
|
|
| T |
3374759 |
aattgtattgttctatttcttttttatc |
3374786 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 26252742 - 26252671
Alignment:
| Q |
858 |
tttaactgtcgttttggtattt-aaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||||||||| | ||||| |||||||| |||||||| |
|
|
| T |
26252742 |
tttaactgtcgttttgatattttaaaggtacgatttgtcaattataccatttgtcaattactcgtatctttt |
26252671 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 45666264 - 45666335
Alignment:
| Q |
858 |
tttaactgtcgttttggtattt-aaagttacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| |||| |||||||||||||||||| ||||||| ||||||| ||||||||| |
|
|
| T |
45666264 |
tttaactgtctttttggtattttaaaggtacgatttgtcaattataccctttgtcaattacttttatctttt |
45666335 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 858 - 927
Target Start/End: Original strand, 6949056 - 6949127
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
6949056 |
tttaactgtctttttggtattttaagtgcacgatttgtcaattataccatttgtcaattactcttatctttt |
6949127 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 858 - 927
Target Start/End: Complemental strand, 19443693 - 19443622
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt-aattactcttatctttt |
927 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||||| ||||||| ||||||| ||||||||| |
|
|
| T |
19443693 |
tttaactgtctttttggtattttaaggatacgatttgtcaattataccctttgtcaattacttttatctttt |
19443622 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0188 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 858 - 910
Target Start/End: Complemental strand, 6514 - 6461
Alignment:
| Q |
858 |
tttaactgtcgttttggtatttaaagt-tacgatttgtcaattatatcctttgt |
910 |
Q |
| |
|
|||||||||||||||||||||| |||| || ||||| ||||||||||||||||| |
|
|
| T |
6514 |
tttaactgtcgttttggtattttaagtgtatgatttatcaattatatcctttgt |
6461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 858 - 957
Target Start/End: Original strand, 14884 - 14988
Alignment:
| Q |
858 |
tttaactgtcgttttggta-tttaaagttacgatttgtcaattatatcctttgt-aattactcttatcttttca--caaactaattaatg-tatacattt |
952 |
Q |
| |
|
||||||||||||||||||| ||||| | || ||||||||||||||| | ||||| |||||| || ||||||||| ||||||||||||| |||| |||| |
|
|
| T |
14884 |
tttaactgtcgttttggtattttaagggtatgatttgtcaattataccttttgtcaattaccctcatcttttcaataaaactaattaatgttatatattt |
14983 |
T |
 |
| Q |
953 |
ggaaa |
957 |
Q |
| |
|
||||| |
|
|
| T |
14984 |
ggaaa |
14988 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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