View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5049-Insertion-1 (Length: 1062)

Name: NF5049-Insertion-1
Description: NF5049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5049-Insertion-1
NF5049-Insertion-1
[»] chr1 (6 HSPs)
chr1 (7-853)||(42623530-42624362)
chr1 (888-1042)||(42624360-42624522)
chr1 (483-641)||(31230278-31230436)
chr1 (678-721)||(31230197-31230240)
chr1 (484-569)||(11398288-11398374)
chr1 (482-563)||(52946191-52946273)
[»] chr5 (2 HSPs)
chr5 (484-720)||(10548172-10548410)
chr5 (483-722)||(30803600-30803853)
[»] chr4 (3 HSPs)
chr4 (626-717)||(34441548-34441639)
chr4 (634-722)||(8332637-8332725)
chr4 (488-552)||(41380458-41380522)
[»] chr6 (3 HSPs)
chr6 (484-641)||(27368781-27368940)
chr6 (484-641)||(27459128-27459287)
chr6 (483-552)||(31600119-31600188)
[»] chr3 (3 HSPs)
chr3 (484-568)||(25493495-25493580)
chr3 (482-552)||(6302520-6302590)
chr3 (483-563)||(2146118-2146198)
[»] scaffold0590 (3 HSPs)
scaffold0590 (629-720)||(4860-4951)
scaffold0590 (482-641)||(4960-5123)
scaffold0590 (653-720)||(7537-7604)
[»] chr8 (2 HSPs)
chr8 (484-557)||(13881215-13881288)
chr8 (483-549)||(33116833-33116899)
[»] chr7 (3 HSPs)
chr7 (482-563)||(21905936-21906022)
chr7 (484-569)||(47762053-47762139)
chr7 (484-559)||(20290704-20290779)
[»] scaffold0036 (1 HSPs)
scaffold0036 (515-558)||(43752-43795)


Alignment Details
Target: chr1 (Bit Score: 748; Significance: 0; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 748; E-Value: 0
Query Start/End: Original strand, 7 - 853
Target Start/End: Original strand, 42623530 - 42624362
Alignment:
Q  7 atggagattgcaagtacctatagctattccaccacaattgaatatattaacttgtacaagtacttgtggtaaatctttttcttcatttgagtgcatctta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42623530 atggagattgcaagtacctatagctattccaccacaattgaatatattaacttgtacaagtacttgtggtaaatctttttcttcatttgagtgcatctta 42623629  T
Q  107 ttaggctcacatggaagcaatttattaagaaactctagcttaggtggtgtgagaaattcaaccatggtttgatttaccttggcttccaagtaaatagcac 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42623630 ttaggctcacatggaagcaatttattaagaaactctagcttaggtggtgtgagaaattcaaccatggtttgatttaccttggcttccaagtaaatagcac 42623729  T
Q  207 cttcatcattgcgagtgataaaggtgtgatcatttcttctgcctgcaacagggtagaaaatggttaatgtttctgaaagtgaattttttaattgagcaat 306  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42623730 cttcatcattgcaagtgataaaggtgtgatcatttcttctgcctgcaacagggtagaaaatggttaatgtttctgaaagtgaattttttaattgagcaat 42623829  T
Q  307 gaaatgggagatttctgttaggccttgttttttgggataaaacataaccattggtaagtaggttgctaattgatgctgatcaaatagacagagtttgaag 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  42623830 gaaatgggagatttctgttaggccttgttttttgggataaaacataaccattggtaaataggttgctaattgaagctgatcaaatagacagagtttgaag 42623929  T
Q  407 aatttgtgttcatttggtgttggaaatgatggtttgattgtttctcttgatgtaattgtgatatccataataatcaatgtaatgagtcaaagagttgaaa 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42623930 aatttgtgttcatttggtgttggaaatgatggtttgattgtttctcttgatgtgattgtgatatccataataatcaatgtaatgagtcaaagagttgaaa 42624029  T
Q  507 ggggcattatagaaaatctgaatgtggactcttataaataagagaaagccaaggaaaaaaggaaagaagattgtgatgtcaacattcttctcctgacctc 606  Q
    || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||||    
T  42624030 ggagcattataggaaatgtgaatgtggactcttataaataagagaaagccaaggaaaaaaggcatgaaaattgtgatgtcaacattcttctcctaacctc 42624129  T
Q  607 tcctcttgttttactatccttattttgctgcaattgtactctctcgttgtgtgttcacagtgaaacattatcaattaattgaaattttcttatatcaatt 706  Q
    ||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  42624130 tcctcttg--------------ttttgctgcaattgtactctctcgttgtgtgttcacagtgaaacattatcaattaattgagatttccttatatcaatt 42624215  T
Q  707 ttagtaccattacaatcaactactttatgttaacatgtttgatacccctttaaattgattggttttataatgggtatttagtaaaactgttgaagggaca 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42624216 ttagtaccattacaatcaactactttatgttaacatgtttgatacccctttaaattgattggttttataatgggtatttagtaaaactgttgaagggaca 42624315  T
Q  807 agttactaattagaattgaattttactagtagaaacatatgatatat 853  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42624316 agttactaattagaattgaattttactagtagaaacatatgatatat 42624362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 888 - 1042
Target Start/End: Original strand, 42624360 - 42624522
Alignment:
Q  888 tattaattagtggaagtttttcattgtattaaattaattaatcaatgg-ttaggagaagtctatttc-caaggaagtgaaacttataatactgcat-ata 984  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||| |||    
T  42624360 tattaattagtggaagtttttcattgtattaaattaattaatcaatggtttaggagaagtctatttcaaaaggaagtgaaacttataatactgcataata 42624459  T
Q  985 t-aagagtaaattaaattgca-tttgaattc--taaacta-tataactcaaacggttttgaaa 1042  Q
    | |||||||||||||||| || |||| || |  ||||||| ||||||||||||||||||||||    
T  42624460 taaagagtaaattaaattacattttggatcccttaaactattataactcaaacggttttgaaa 42624522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 483 - 641
Target Start/End: Complemental strand, 31230436 - 31230278
Alignment:
Q  483 atgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaag-ccaaggaaaaaaggaaagaagattgtg 581  Q
    ||||||||||||  ||||||  ||||||| |||| | ||||  |||| ||||| |||||||||| ||||||  |||| | || ||| |  ||| ||||||    
T  31230436 atgtaatgagtcttagagttagaaggggcgttatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataagcatggaa-attgtg 31230338  T
Q  582 atgtcaacattcttctcctgacctctcctcttgttttactatccttattttgctgcaatt 641  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||||||||  ||||||||    
T  31230337 atgtcaacattctcctcctaacctcttctcttgttttactatccttatttccctgcaatt 31230278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 678 - 721
Target Start/End: Complemental strand, 31230240 - 31230197
Alignment:
Q  678 caattaattgaaattttcttatatcaattttagtaccattacaa 721  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||    
T  31230240 caattaattgagatttccttatatcaattttagtatcattacaa 31230197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 484 - 569
Target Start/End: Complemental strand, 11398374 - 11398288
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagag-aaagccaaggaaaaaagga 569  Q
    |||||||||||  ||||||  ||| |||||||| ||||||  |||| ||||| |||||||||| ||| ||||||||||||| |||||    
T  11398374 tgtaatgagtcttagagttagaagtggcattatggaaaataggaatatggacccttataaatatgagaaaagccaaggaaataagga 11398288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 482 - 563
Target Start/End: Original strand, 52946191 - 52946273
Alignment:
Q  482 aatgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagag-aaagccaaggaaa 563  Q
    |||||||||||||  ||||||  |||||||||||| | ||||  |||| ||||| |||||||||| ||| |||||||||||||    
T  52946191 aatgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggacccttataaatatgagaaaagccaaggaaa 52946273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 2e-55; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 484 - 720
Target Start/End: Original strand, 10548172 - 10548410
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaa-gccaaggaaaaaaggaaagaagat-tgtg 581  Q
    |||||||||||  ||||||  |||||||||||| ||||||  |||| |||||  ||||||||| |||||| |||||||||| ||| |  ||| || ||||    
T  10548172 tgtaatgagtcttagagttagaaggggcattatggaaaataggaatatggacctttataaatatgagaaaagccaaggaaataagtatggaatatgtgtg 10548271  T
Q  582 atgtcaacattcttctcctgacctctcctcttgttttactatccttattttgctgcaattgtactctctcgttgtgtgttcacagtgaaacattatcaat 681  Q
    |||||||||||||||| || |||||| ||||  |||||||||||||||||| |||||||| |||||| || |||||||||||||||||||||||||||||    
T  10548272 atgtcaacattcttcttctaacctcttctctcattttactatccttattttcctgcaattttactctgtcattgtgtgttcacagtgaaacattatcaat 10548371  T
Q  682 taattgaaattttcttatatcaattttagtaccattaca 720  Q
    ||||||| |||| |||||||| |||||||||||||||||    
T  10548372 taattgagatttccttatatccattttagtaccattaca 10548410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 483 - 722
Target Start/End: Complemental strand, 30803853 - 30803600
Alignment:
Q  483 atgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaagccaaggaaaaaaggaaagaagattgtga 582  Q
    ||||||||||||||| || | |||||| || ||||| |||| ||||| |  || |||||||||||||||| |||||||||| | |  | | | |||||||    
T  30803853 atgtaatgagtcaaatagcttaaaggg-caatataggaaatttgaatataaacccttataaataagagaatgccaaggaaagaggatatggaaattgtga 30803755  T
Q  583 tgtcaacattcttctcctgacctctcctcttgttttactatccttattttgctg---------------caattgtactctctcgttgtgtgttcacagt 667  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| |||               ||||| |||| |||| ||||||||||| |||    
T  30803754 tgtcaacattcttctcctaacctcttctcttgttttactatccttattttcctgcaattttatttcctacaattttactatctcattgtgtgttcaaagt 30803655  T
Q  668 gaaacattatcaattaattgaaattttcttatatcaattttagtaccattacaat 722  Q
    ||||||||||||||||||| | |||  |||||||||||||||||||| |||||||    
T  30803654 gaaacattatcaattaatttagattcccttatatcaattttagtaccgttacaat 30803600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 3e-32; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 626 - 717
Target Start/End: Complemental strand, 34441639 - 34441548
Alignment:
Q  626 ttattttgctgcaattgtactctctcgttgtgtgttcacagtgaaacattatcaattaattgaaattttcttatatcaattttagtaccatt 717  Q
    ||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  34441639 ttattttcctgcaattgtactctgtcattgtgtgttcacagtgaaacattatcaattaattgagatttccttatatcaattttagtaccatt 34441548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 634 - 722
Target Start/End: Original strand, 8332637 - 8332725
Alignment:
Q  634 ctgcaattgtactctctcgttgtgtgttcacagtgaaacattatcaattaattgaaattttcttatatcaattttagtaccattacaat 722  Q
    |||||||| |||||| |  |||||| |||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  8332637 ctgcaattatactctgtgattgtgtattcacagcaaaacattatcaattaattgagatttccttatatcaattttagtaccattacaat 8332725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 41380458 - 41380522
Alignment:
Q  488 atgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaa 552  Q
    |||||| |||||||||| ||||| | |||||||||| |||||||||||| | |||||||||||||    
T  41380458 atgagttaaagagttgataggggtaatatagaaaatgtgaatgtggactttaataaataagagaa 41380522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 8e-30; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 484 - 641
Target Start/End: Original strand, 27368781 - 27368940
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaagccaag-gaaaaaaggaaagaagat-tgtg 581  Q
    |||||||||||||||||||||||| || |||| || |||| |||||||||||||||||||||| |||||||||||| |||||| | |  ||| || ||||    
T  27368781 tgtaatgagtcaaagagttgaaagaggtattacaggaaatatgaatgtggactcttataaatacgagaaagccaagagaaaaaggcatggaatatgtgtg 27368880  T
Q  582 atgtcaacattcttctcctgacctctcctcttgttttactatccttattttgctgcaatt 641  Q
    |||||||||||||||| || ||| || ||||  ||||||||||||||||||  |||||||    
T  27368881 atgtcaacattcttcttctaaccacttctctcattttactatccttattttcttgcaatt 27368940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 484 - 641
Target Start/End: Original strand, 27459128 - 27459287
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaagccaag-gaaaaaaggaaagaagat-tgtg 581  Q
    |||||||||||||||||||||||| || |||| || |||| |||||||||||||||||||||| |||||||||||| |||||| | |  ||| || ||||    
T  27459128 tgtaatgagtcaaagagttgaaagaggtattacaggaaatatgaatgtggactcttataaatacgagaaagccaagagaaaaaggcatggaatatgtgtg 27459227  T
Q  582 atgtcaacattcttctcctgacctctcctcttgttttactatccttattttgctgcaatt 641  Q
    |||||||||||||||| || ||| || ||||  ||||||||||||||||||  |||||||    
T  27459228 atgtcaacattcttcttctaaccacttctctcattttactatccttattttcttgcaatt 27459287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 483 - 552
Target Start/End: Complemental strand, 31600188 - 31600119
Alignment:
Q  483 atgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaa 552  Q
    ||||||||||||||||| |||||| ||||| ||||||||||  ||||||||||  |||| ||||||||||    
T  31600188 atgtaatgagtcaaagaattgaaaagggcaatatagaaaataggaatgtggacctttatgaataagagaa 31600119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 7e-24; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 484 - 568
Target Start/End: Original strand, 25493495 - 25493580
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgt-ggactcttataaataagagaaagccaaggaaaaaagg 568  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| || | ||||||||||||||||||||||||||| |||||||    
T  25493495 tgtaatgagtcaaagagttgaaaggggcaatatagaaaatgtgaacgtcgaactcttataaataagagaaagccaagggaaaaagg 25493580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 482 - 552
Target Start/End: Original strand, 6302520 - 6302590
Alignment:
Q  482 aatgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaa 552  Q
    ||||||||||||||||||| | ||| ||||| |||||||||| |||||||| |||||||||||||||||||    
T  6302520 aatgtaatgagtcaaagagcttaaaagggcaatatagaaaatatgaatgtgaactcttataaataagagaa 6302590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 483 - 563
Target Start/End: Original strand, 2146118 - 2146198
Alignment:
Q  483 atgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaagccaaggaaa 563  Q
    |||||||||||||||||||| ||||| ||| |||   |||| |||||||| || ||||||||||||| || || |||||||    
T  2146118 atgtaatgagtcaaagagtttaaaggagcaatatttgaaatatgaatgtgaacgcttataaataagataaggcaaaggaaa 2146198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 52; Significance: 3e-20; HSPs: 3)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 629 - 720
Target Start/End: Complemental strand, 4951 - 4860
Alignment:
Q  629 ttttgctgcaattgtactctctcgttgtgtgttcacagtgaaacattatcaattaattgaaattttcttatatcaattttagtaccattaca 720  Q
    |||| ||||| ||||||||  || |||| ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  4951 ttttcctgcagttgtactcaatcattgtatgttcacagggaaacattatcaattaattgagatttccttatatcaattttagtaccgttaca 4860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 482 - 641
Target Start/End: Complemental strand, 5123 - 4960
Alignment:
Q  482 aatgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttata--aataagagaaa-gccaaggaaaaaaggaaagaagat- 577  Q
    |||||||||||||  ||||||  |||||||||||| | ||||  |||| ||||| ||||||  |||| |||||| |||||||||| ||| |   || ||     
T  5123 aatgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggacccttatataaatatgagaaaagccaaggaaataagcatgaaatatg 5024  T
Q  578 tgtgatgtcaacattcttctcctgacctctcctcttgttttactatccttattttgctgcaatt 641  Q
    |||||||||||||||||||| || |||||| ||||  |||||||||||||||||| ||||||||    
T  5023 tgtgatgtcaacattcttcttctaacctcttctctcattttactatccttattttcctgcaatt 4960  T

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Target: scaffold0590; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 653 - 720
Target Start/End: Complemental strand, 7604 - 7537
Alignment:
Q  653 ttgtgtgttcacagtgaaacattatcaattaattgaaattttcttatatcaattttagtaccattaca 720  Q
    |||| |||||| |||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  7604 ttgtatgttcatagtgaaacattatcaattaattgagatttccttttatcaattttagtaccgttaca 7537  T

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Target: chr8 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 13881215 - 13881288
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaagcca 557  Q
    ||||||||||||| ||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  13881215 tgtaatgagtcaaggagttaaaaggagcaatatagaaaatgtgaatgtggactcttataaataagagaaggcca 13881288  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 33116833 - 33116899
Alignment:
Q  483 atgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataaga 549  Q
    |||||| ||||||||||||||||| || || ||||| |||| |||||||| ||||||||||| ||||    
T  33116833 atgtaacgagtcaaagagttgaaaaggacaatataggaaatatgaatgtgaactcttataaacaaga 33116899  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 563
Target Start/End: Original strand, 21905936 - 21906022
Alignment:
Q  482 aatgtaatgagtcaaagagttgaaaggggcattata-----gaaaatctgaatgtggactcttataaataagagaaagccaaggaaa 563  Q
    ||||||||||||||||||| ||||| ||||| ||||     | |||| |||| |||||| |||||||||||||||| ||||||||||    
T  21905936 aatgtaatgagtcaaagagatgaaaagggcaatataatataggaaatatgaaagtggacacttataaataagagaaggccaaggaaa 21906022  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 484 - 569
Target Start/End: Original strand, 47762053 - 47762139
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagag-aaagccaaggaaaaaagga 569  Q
    |||||||||||  ||||||  |||||||||||| ||||||  |||| ||||| |||||||||| ||| ||||||||||||| |||||    
T  47762053 tgtaatgagtcttagagttagaaggggcattatggaaaataggaatatggacccttataaatatgagaaaagccaaggaaataagga 47762139  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 559
Target Start/End: Complemental strand, 20290779 - 20290704
Alignment:
Q  484 tgtaatgagtcaaagagttgaaaggggcattatagaaaatctgaatgtggactcttataaataagagaaagccaag 559  Q
    ||||||||||||||| | ||||| ||  | ||| | |||| ||||| ||||| |||||||||||||||||||||||    
T  20290779 tgtaatgagtcaaagggctgaaaaggataatatggtaaatatgaatatggacccttataaataagagaaagccaag 20290704  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 558
Target Start/End: Complemental strand, 43795 - 43752
Alignment:
Q  515 atagaaaatctgaatgtggactcttataaataagagaaagccaa 558  Q
    |||| |||| |||||||||||||||||||||||||||| |||||    
T  43795 ataggaaatttgaatgtggactcttataaataagagaaggccaa 43752  T

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