View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5052-Insertion-13 (Length: 387)
Name: NF5052-Insertion-13
Description: NF5052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5052-Insertion-13 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 118 - 387
Target Start/End: Original strand, 5439141 - 5439408
Alignment:
| Q |
118 |
taatattattatatgtctcacacaaccgataatatcaacattgttagatttgatatatgtaaggatagtnnnnnnntttgtagttacatacacgggatat |
217 |
Q |
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| T |
5439141 |
taatattattatatgtctcacacaacc-ataatatcaacattgttagatttgatatatgtaaggatagtaaaaaactt-gtagttacatacacgggatat |
5439238 |
T |
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| Q |
218 |
gtatcctaacatatattcatactccttacataatggatgtatgaatgtacatttaacgatagtatatatgaaattcgtacttattaataaattaactata |
317 |
Q |
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| T |
5439239 |
gtatcctaacatatattcgtgctccttatgtaatggatgtatgaatatagatttaacgatagtatatatgaaattcgtatttattaataaattaactata |
5439338 |
T |
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| Q |
318 |
ttacttaaatatctttaactaaatatacaagtttcattttaaattgaaaacctagatattgtttatgcta |
387 |
Q |
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| T |
5439339 |
ttgcttaaatatctttaactaaatatacaagtttcattttaaattgaaaacctagatattgtttatgcta |
5439408 |
T |
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