View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5052-Insertion-14 (Length: 277)
Name: NF5052-Insertion-14
Description: NF5052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5052-Insertion-14 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 7 - 277
Target Start/End: Original strand, 50200581 - 50200852
Alignment:
| Q |
7 |
atatataaatggttttagaatgttaacaaggtttacaaacttaatcttacacacatataatttgaaaaggttcatgcttgtttacacattgaattaagtc |
106 |
Q |
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| T |
50200581 |
atatataaatggttttagaatgttaacaaggtttacaaacttaatcttacacacatataatttgaaaaggttcatgcttgtttacacattgaattaagtc |
50200680 |
T |
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| Q |
107 |
ttataatacatgtagaaggtata-tcttaattatctactgctaatatactatcaacaattaccaattaaacagctagtaaattggaaatttcacgttcag |
205 |
Q |
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| T |
50200681 |
ttataatacatgtagaaggtataatcttaattatctactgctaatatactatcaacaattaccaattaaacagctagtaaattggaaatttcacgttcag |
50200780 |
T |
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| Q |
206 |
cttagtatgtagattaatttgaaatgaggaattaatgaataatcataacatttgatttcatgttttgaaaaa |
277 |
Q |
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| T |
50200781 |
cttagtatgtagattaatttgaaatgaggaattaatgaataatcataacatttgatttcatgttttgaaaaa |
50200852 |
T |
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