View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5052-Insertion-8 (Length: 461)

Name: NF5052-Insertion-8
Description: NF5052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5052-Insertion-8
NF5052-Insertion-8
[»] chr7 (87 HSPs)
chr7 (334-461)||(28408465-28408592)
chr7 (339-461)||(7417736-7417858)
chr7 (332-461)||(32523426-32523556)
chr7 (336-461)||(8437301-8437427)
chr7 (343-461)||(32178078-32178197)
chr7 (339-461)||(49114085-49114209)
chr7 (338-461)||(19305738-19305865)
chr7 (339-456)||(31894484-31894601)
chr7 (338-461)||(32832457-32832581)
chr7 (340-456)||(1511190-1511306)
chr7 (335-435)||(1511437-1511537)
chr7 (343-461)||(2933289-2933412)
chr7 (338-398)||(10878623-10878683)
chr7 (339-454)||(24986719-24986833)
chr7 (338-398)||(49113860-49113920)
chr7 (339-398)||(8437593-8437652)
chr7 (334-461)||(32177849-32177976)
chr7 (339-397)||(44307610-44307668)
chr7 (339-461)||(45746723-45746846)
chr7 (342-398)||(28408244-28408300)
chr7 (342-398)||(37453354-37453410)
chr7 (334-397)||(2933557-2933620)
chr7 (338-461)||(19305968-19306091)
chr7 (340-398)||(7417511-7417569)
chr7 (339-397)||(31894257-31894315)
chr7 (351-461)||(32523212-32523322)
chr7 (335-461)||(45746949-45747074)
chr7 (340-456)||(44307845-44307964)
chr7 (339-457)||(37453080-37453196)
chr7 (329-456)||(30060393-30060520)
chr7 (335-455)||(29226491-29226611)
chr7 (334-398)||(45055316-45055380)
chr7 (339-398)||(7172930-7172989)
chr7 (332-398)||(10543667-10543733)
chr7 (336-398)||(38495170-38495232)
chr7 (342-398)||(8869584-8869640)
chr7 (334-398)||(23036641-23036705)
chr7 (338-398)||(43575306-43575366)
chr7 (338-398)||(45055578-45055638)
chr7 (339-398)||(8522323-8522382)
chr7 (335-398)||(8522568-8522631)
chr7 (338-397)||(10878921-10878980)
chr7 (335-398)||(31283409-31283472)
chr7 (340-387)||(32832234-32832281)
chr7 (339-398)||(41922281-41922340)
chr7 (340-398)||(12423845-12423903)
chr7 (340-398)||(21733068-21733126)
chr7 (340-398)||(34287773-34287831)
chr7 (340-398)||(42391296-42391354)
chr7 (340-398)||(44458040-44458098)
chr7 (329-398)||(21555880-21555949)
chr7 (336-397)||(29099431-29099492)
chr7 (365-398)||(37452478-37452511)
chr7 (340-393)||(43161650-43161703)
chr7 (334-390)||(8114574-8114630)
chr7 (338-398)||(8114972-8115032)
chr7 (342-398)||(8871487-8871543)
chr7 (338-398)||(24331377-24331437)
chr7 (342-398)||(45062318-45062374)
chr7 (343-398)||(7149294-7149349)
chr7 (335-398)||(8805739-8805802)
chr7 (343-398)||(8806000-8806055)
chr7 (335-398)||(10360400-10360463)
chr7 (421-456)||(10878855-10878890)
chr7 (343-398)||(12424102-12424157)
chr7 (339-398)||(21455810-21455869)
chr7 (339-398)||(38494913-38494972)
chr7 (343-398)||(43699925-43699980)
chr7 (339-398)||(45867444-45867503)
chr7 (335-398)||(47221951-47222014)
chr7 (339-398)||(49023576-49023635)
chr7 (340-398)||(20121206-20121264)
chr7 (340-398)||(31813730-31813788)
chr7 (340-398)||(32072202-32072260)
chr7 (340-398)||(34287516-34287574)
chr7 (340-398)||(41857396-41857454)
chr7 (340-398)||(42391552-42391610)
chr7 (340-397)||(8871235-8871292)
chr7 (337-398)||(21733324-21733385)
chr7 (342-398)||(4030865-4030921)
chr7 (334-398)||(7173187-7173251)
chr7 (334-398)||(19124825-19124889)
chr7 (334-398)||(23552228-23552292)
chr7 (338-398)||(29706876-29706936)
chr7 (335-383)||(31115832-31115880)
chr7 (342-398)||(46426663-46426719)
chr7 (338-398)||(47221705-47221765)
[»] chr6 (46 HSPs)
chr6 (157-340)||(1091086-1091270)
chr6 (335-461)||(33595543-33595670)
chr6 (328-461)||(4243146-4243280)
chr6 (339-461)||(23068695-23068818)
chr6 (335-461)||(6755140-6755267)
chr6 (341-461)||(3218152-3218273)
chr6 (215-340)||(34247412-34247537)
chr6 (339-457)||(14763533-14763654)
chr6 (339-461)||(3922538-3922661)
chr6 (338-440)||(3218385-3218488)
chr6 (335-461)||(3922763-3922889)
chr6 (339-461)||(23068922-23069042)
chr6 (336-461)||(4242919-4243044)
chr6 (341-461)||(33595320-33595440)
chr6 (334-398)||(14763312-14763376)
chr6 (337-398)||(10810263-10810324)
chr6 (421-461)||(10810059-10810099)
chr6 (342-398)||(14655078-14655134)
chr6 (334-398)||(22569019-22569083)
chr6 (340-398)||(28852188-28852246)
chr6 (337-398)||(2316745-2316806)
chr6 (338-398)||(9899451-9899511)
chr6 (337-397)||(10027124-10027184)
chr6 (338-398)||(13178479-13178539)
chr6 (339-398)||(9899194-9899253)
chr6 (339-398)||(24896429-24896488)
chr6 (343-398)||(30121584-30121639)
chr6 (339-397)||(1925408-1925466)
chr6 (340-398)||(10026140-10026198)
chr6 (339-397)||(21926063-21926121)
chr6 (338-398)||(1925114-1925174)
chr6 (334-398)||(2863574-2863638)
chr6 (334-398)||(2882877-2882941)
chr6 (368-461)||(6754946-6755038)
chr6 (338-398)||(17853899-17853959)
chr6 (335-395)||(25121521-25121581)
chr6 (339-398)||(8129789-8129848)
chr6 (355-398)||(32557393-32557436)
chr6 (340-398)||(7920485-7920543)
chr6 (340-398)||(9546667-9546725)
chr6 (336-398)||(22568759-22568821)
chr6 (340-398)||(24325249-24325307)
chr6 (340-398)||(25121753-25121811)
chr6 (336-397)||(12346067-12346128)
chr6 (342-398)||(9220105-9220161)
chr6 (342-398)||(20491530-20491586)
[»] chr8 (68 HSPs)
chr8 (334-461)||(35482925-35483053)
chr8 (339-461)||(2968093-2968216)
chr8 (338-461)||(10682059-10682182)
chr8 (338-461)||(17875993-17876117)
chr8 (335-461)||(14577087-14577216)
chr8 (339-461)||(30904360-30904483)
chr8 (337-461)||(27912321-27912446)
chr8 (337-461)||(27958740-27958865)
chr8 (340-461)||(30904585-30904705)
chr8 (338-461)||(35482700-35482823)
chr8 (338-456)||(3691814-3691933)
chr8 (327-461)||(17875755-17875889)
chr8 (340-461)||(13327262-13327385)
chr8 (328-440)||(2967858-2967971)
chr8 (335-461)||(27912090-27912217)
chr8 (335-461)||(27958509-27958636)
chr8 (331-398)||(3691573-3691640)
chr8 (339-397)||(20178370-20178428)
chr8 (339-397)||(20223098-20223156)
chr8 (340-398)||(30928600-30928658)
chr8 (343-456)||(4128969-4129085)
chr8 (334-459)||(38464863-38464988)
chr8 (342-397)||(17844169-17844224)
chr8 (339-435)||(23792830-23792926)
chr8 (335-397)||(10682349-10682411)
chr8 (336-456)||(30928309-30928431)
chr8 (341-456)||(42123703-42123818)
chr8 (340-398)||(44379522-44379580)
chr8 (339-456)||(7899992-7900109)
chr8 (340-456)||(20223333-20223452)
chr8 (335-398)||(30253882-30253945)
chr8 (340-398)||(21660983-21661041)
chr8 (340-448)||(44379763-44379875)
chr8 (334-398)||(148287-148351)
chr8 (340-461)||(38464641-38464761)
chr8 (339-398)||(30463913-30463972)
chr8 (343-398)||(34213388-34213443)
chr8 (335-398)||(42123992-42124055)
chr8 (339-398)||(13327550-13327611)
chr8 (339-397)||(27523243-27523301)
chr8 (340-398)||(28828472-28828530)
chr8 (337-398)||(21660723-21660784)
chr8 (342-398)||(13795516-13795572)
chr8 (338-398)||(27712762-27712822)
chr8 (334-398)||(27713020-27713084)
chr8 (342-398)||(37727201-37727257)
chr8 (351-398)||(4128752-4128799)
chr8 (342-397)||(26938441-26938496)
chr8 (339-398)||(33279194-33279253)
chr8 (339-398)||(34632224-34632283)
chr8 (335-398)||(42684782-42684845)
chr8 (340-398)||(10925358-10925416)
chr8 (343-458)||(17866275-17866390)
chr8 (340-398)||(34199091-34199149)
chr8 (336-398)||(36556791-36556853)
chr8 (424-461)||(27523040-27523077)
chr8 (341-398)||(29596403-29596460)
chr8 (339-396)||(39198614-39198671)
chr8 (337-398)||(39198872-39198933)
chr8 (343-461)||(17843883-17844005)
chr8 (338-398)||(18929700-18929760)
chr8 (334-398)||(28828210-28828274)
chr8 (337-383)||(26187142-26187188)
chr8 (336-398)||(34632481-34632543)
chr8 (337-398)||(2241468-2241529)
chr8 (337-398)||(14161494-14161555)
chr8 (342-398)||(30253628-30253684)
chr8 (334-398)||(40277485-40277549)
[»] chr4 (99 HSPs)
chr4 (335-461)||(13294826-13294953)
chr4 (339-461)||(49621661-49621784)
chr4 (340-461)||(23163281-23163403)
chr4 (339-461)||(33692486-33692608)
chr4 (337-461)||(42856801-42856925)
chr4 (338-461)||(52690094-52690217)
chr4 (341-461)||(46143273-46143394)
chr4 (343-459)||(50161118-50161237)
chr4 (338-461)||(33369735-33369859)
chr4 (339-461)||(20930974-20931097)
chr4 (339-461)||(55742831-55742954)
chr4 (342-461)||(28458523-28458644)
chr4 (335-461)||(9525800-9525930)
chr4 (335-456)||(30055437-30055554)
chr4 (338-461)||(3546712-3546838)
chr4 (338-461)||(23163504-23163627)
chr4 (335-461)||(26202517-26202643)
chr4 (335-461)||(33692257-33692383)
chr4 (339-461)||(49621438-49621560)
chr4 (334-398)||(41689383-41689447)
chr4 (342-461)||(50161341-50161460)
chr4 (342-461)||(21707605-21707724)
chr4 (335-461)||(28458746-28458872)
chr4 (339-461)||(37872986-37873109)
chr4 (335-397)||(46143559-46143621)
chr4 (338-395)||(33369507-33369564)
chr4 (335-461)||(55140193-55140318)
chr4 (339-398)||(21053583-21053642)
chr4 (339-398)||(25297679-25297738)
chr4 (341-456)||(30799548-30799668)
chr4 (335-398)||(37872762-37872825)
chr4 (340-435)||(42857051-42857147)
chr4 (335-398)||(52690385-52690448)
chr4 (350-461)||(5260204-5260314)
chr4 (339-461)||(9526033-9526155)
chr4 (343-461)||(41689615-41689734)
chr4 (339-461)||(48419441-48419563)
chr4 (340-461)||(5260416-5260538)
chr4 (343-456)||(25297909-25298023)
chr4 (335-461)||(3546483-3546610)
chr4 (334-398)||(30799286-30799350)
chr4 (341-457)||(55140425-55140541)
chr4 (340-394)||(55742621-55742675)
chr4 (340-397)||(30055208-30055265)
chr4 (335-391)||(2685980-2686036)
chr4 (339-461)||(20931201-20931324)
chr4 (340-461)||(13294602-13294724)
chr4 (340-398)||(21707890-21707948)
chr4 (354-457)||(23549473-23549577)
chr4 (339-398)||(32488583-32488642)
chr4 (338-398)||(23549788-23549848)
chr4 (335-395)||(23963107-23963167)
chr4 (335-398)||(10993620-10993683)
chr4 (406-461)||(21053365-21053420)
chr4 (332-398)||(9902645-9902711)
chr4 (423-461)||(23549582-23549620)
chr4 (338-398)||(32922323-32922383)
chr4 (338-398)||(52654188-52654248)
chr4 (409-456)||(2686207-2686254)
chr4 (339-398)||(20983913-20983972)
chr4 (339-398)||(20984170-20984229)
chr4 (335-398)||(21360452-21360515)
chr4 (335-398)||(45655948-45656011)
chr4 (336-398)||(39791913-39791975)
chr4 (336-398)||(49387438-49387500)
chr4 (340-398)||(52538135-52538193)
chr4 (340-398)||(52653931-52653989)
chr4 (337-398)||(16019954-16020015)
chr4 (337-398)||(16530315-16530376)
chr4 (337-397)||(2686273-2686333)
chr4 (338-398)||(22335434-22335493)
chr4 (338-398)||(41376582-41376642)
chr4 (342-398)||(44551171-44551227)
chr4 (421-461)||(48419298-48419338)
chr4 (341-397)||(53232388-53232444)
chr4 (338-397)||(15516562-15516621)
chr4 (339-398)||(21361440-21361499)
chr4 (340-383)||(37068685-37068728)
chr4 (343-398)||(52537882-52537937)
chr4 (342-397)||(53232099-53232154)
chr4 (340-398)||(9902912-9902970)
chr4 (339-397)||(25331814-25331872)
chr4 (427-457)||(26202754-26202784)
chr4 (336-398)||(26886866-26886928)
chr4 (340-398)||(32922067-32922125)
chr4 (340-398)||(35130791-35130849)
chr4 (343-397)||(43914443-43914497)
chr4 (336-398)||(46648065-46648127)
chr4 (420-457)||(563574-563611)
chr4 (355-396)||(9644767-9644808)
chr4 (229-258)||(18982759-18982788)
chr4 (341-398)||(23572602-23572659)
chr4 (341-398)||(35131052-35131109)
chr4 (340-397)||(44550909-44550966)
chr4 (334-398)||(563485-563549)
chr4 (342-398)||(7067498-7067554)
chr4 (334-398)||(17040166-17040230)
chr4 (335-383)||(41944168-41944216)
chr4 (342-398)||(54036866-54036922)
[»] chr2 (68 HSPs)
chr2 (334-461)||(2318714-2318841)
chr2 (335-461)||(27360345-27360472)
chr2 (334-461)||(17846231-17846359)
chr2 (342-461)||(9319804-9319924)
chr2 (339-461)||(18916848-18916971)
chr2 (340-461)||(20363970-20364092)
chr2 (336-461)||(601553-601682)
chr2 (338-461)||(4261376-4261503)
chr2 (327-398)||(10044732-10044803)
chr2 (338-461)||(18916623-18916746)
chr2 (339-461)||(9320027-9320149)
chr2 (341-461)||(10109038-10109160)
chr2 (327-398)||(10108800-10108871)
chr2 (334-461)||(44536409-44536536)
chr2 (339-461)||(17846007-17846129)
chr2 (340-461)||(2318493-2318613)
chr2 (334-398)||(4261147-4261211)
chr2 (336-461)||(44536175-44536306)
chr2 (340-397)||(20364259-20364316)
chr2 (338-397)||(27360117-27360176)
chr2 (343-397)||(5547339-5547393)
chr2 (340-461)||(10044969-10045092)
chr2 (334-397)||(18178377-18178440)
chr2 (340-398)||(30337424-30337482)
chr2 (337-461)||(30337648-30337777)
chr2 (338-440)||(8322429-8322530)
chr2 (340-398)||(601327-601386)
chr2 (334-398)||(40710310-40710374)
chr2 (343-459)||(8236693-8236809)
chr2 (338-457)||(8322242-8322362)
chr2 (340-398)||(10714008-10714066)
chr2 (338-440)||(13862491-13862593)
chr2 (341-398)||(33274653-33274710)
chr2 (334-398)||(9911903-9911967)
chr2 (338-398)||(11723703-11723763)
chr2 (337-397)||(26499419-26499479)
chr2 (338-398)||(30488336-30488396)
chr2 (335-398)||(341307-341370)
chr2 (338-381)||(981779-981822)
chr2 (339-398)||(1650759-1650818)
chr2 (421-456)||(5547162-5547197)
chr2 (335-398)||(29154059-29154122)
chr2 (338-397)||(31769780-31769839)
chr2 (341-383)||(5547103-5547145)
chr2 (336-398)||(20663914-20663976)
chr2 (340-398)||(26499667-26499725)
chr2 (336-398)||(28789123-28789185)
chr2 (340-398)||(35412133-35412191)
chr2 (338-398)||(341568-341628)
chr2 (339-395)||(10192083-10192139)
chr2 (338-394)||(18449354-18449410)
chr2 (339-398)||(9027281-9027340)
chr2 (339-398)||(10714264-10714323)
chr2 (339-398)||(13421333-13421392)
chr2 (342-397)||(21251784-21251839)
chr2 (421-456)||(43055831-43055866)
chr2 (339-398)||(44490560-44490619)
chr2 (340-398)||(23926391-23926449)
chr2 (340-398)||(44490304-44490362)
chr2 (361-398)||(2450109-2450146)
chr2 (328-397)||(3889128-3889197)
chr2 (341-398)||(15461511-15461568)
chr2 (341-398)||(29154319-29154376)
chr2 (340-398)||(1650506-1650561)
chr2 (339-383)||(9912184-9912228)
chr2 (334-398)||(12937640-12937704)
chr2 (339-383)||(21251025-21251069)
chr2 (335-398)||(31557004-31557068)
[»] chr5 (68 HSPs)
chr5 (340-461)||(35362984-35363106)
chr5 (339-461)||(32936205-32936328)
chr5 (335-461)||(40834159-40834286)
chr5 (340-461)||(18485659-18485781)
chr5 (338-461)||(13600442-13600568)
chr5 (339-461)||(2094574-2094697)
chr5 (340-461)||(7145762-7145884)
chr5 (342-461)||(20769935-20770056)
chr5 (340-461)||(30370511-30370632)
chr5 (340-461)||(30370736-30370856)
chr5 (334-398)||(35363277-35363341)
chr5 (339-461)||(40833935-40834057)
chr5 (340-461)||(32936430-32936551)
chr5 (343-461)||(3539600-3539720)
chr5 (335-398)||(7145528-7145591)
chr5 (335-461)||(20769707-20769833)
chr5 (338-456)||(25363244-25363363)
chr5 (337-398)||(20339153-20339214)
chr5 (334-398)||(2094860-2094924)
chr5 (338-398)||(15179077-15179137)
chr5 (338-398)||(32994442-32994502)
chr5 (336-435)||(13600695-13600795)
chr5 (334-461)||(3539821-3539947)
chr5 (340-398)||(19558160-19558218)
chr5 (338-391)||(37093738-37093791)
chr5 (338-398)||(18485947-18486007)
chr5 (343-456)||(35361922-35362035)
chr5 (339-398)||(35362205-35362264)
chr5 (343-456)||(132048-132165)
chr5 (334-456)||(15178783-15178906)
chr5 (340-435)||(25363016-25363111)
chr5 (340-398)||(27843023-27843081)
chr5 (339-397)||(32458075-32458133)
chr5 (342-456)||(32994164-32994276)
chr5 (336-398)||(132336-132396)
chr5 (336-398)||(1643535-1643597)
chr5 (338-398)||(40952065-40952125)
chr5 (339-398)||(2467058-2467117)
chr5 (339-398)||(16736800-16736859)
chr5 (335-398)||(19130865-19130928)
chr5 (335-398)||(24858398-24858461)
chr5 (335-398)||(33429789-33429852)
chr5 (340-398)||(2426229-2426287)
chr5 (340-398)||(14871734-14871792)
chr5 (340-398)||(19131126-19131184)
chr5 (340-398)||(39589615-39589673)
chr5 (341-397)||(3294584-3294640)
chr5 (342-398)||(14729450-14729506)
chr5 (338-397)||(1098890-1098949)
chr5 (339-398)||(3279444-3279503)
chr5 (339-398)||(6541465-6541524)
chr5 (334-397)||(7610519-7610582)
chr5 (338-397)||(12875662-12875720)
chr5 (339-394)||(29171556-29171611)
chr5 (339-398)||(31485956-31486015)
chr5 (339-398)||(32771990-32772049)
chr5 (340-398)||(7601849-7601907)
chr5 (336-398)||(7610259-7610321)
chr5 (419-461)||(7846485-7846527)
chr5 (348-398)||(21258336-21258386)
chr5 (340-398)||(22621303-22621361)
chr5 (340-398)||(30129731-30129789)
chr5 (344-398)||(37092183-37092237)
chr5 (340-397)||(13455931-13455988)
chr5 (338-398)||(6539991-6540050)
chr5 (334-398)||(7601587-7601651)
chr5 (242-334)||(16749618-16749709)
chr5 (338-398)||(17244706-17244766)
[»] chr1 (76 HSPs)
chr1 (336-461)||(17611421-17611547)
chr1 (334-456)||(40902321-40902444)
chr1 (335-461)||(2026943-2027070)
chr1 (340-461)||(12139247-12139370)
chr1 (343-461)||(17985290-17985409)
chr1 (343-461)||(30002214-30002333)
chr1 (338-461)||(30563006-30563131)
chr1 (338-461)||(7113863-7113987)
chr1 (337-456)||(12115180-12115300)
chr1 (342-461)||(25779887-25780011)
chr1 (334-461)||(30562778-30562904)
chr1 (335-461)||(1549322-1549448)
chr1 (339-461)||(2026720-2026842)
chr1 (334-435)||(17611674-17611776)
chr1 (335-456)||(19897171-19897293)
chr1 (334-397)||(25780177-25780240)
chr1 (342-461)||(30002434-30002552)
chr1 (339-456)||(4969593-4969711)
chr1 (334-456)||(40290008-40290133)
chr1 (340-461)||(7114088-7114208)
chr1 (335-398)||(17985575-17985638)
chr1 (350-398)||(40902615-40902663)
chr1 (334-397)||(12139018-12139081)
chr1 (339-398)||(19897466-19897525)
chr1 (342-398)||(12114954-12115010)
chr1 (338-398)||(35521463-35521523)
chr1 (339-398)||(5586486-5586545)
chr1 (343-398)||(26874483-26874538)
chr1 (335-398)||(34480440-34480503)
chr1 (340-398)||(4969364-4969422)
chr1 (340-398)||(49564185-49564243)
chr1 (336-397)||(25267441-25267502)
chr1 (338-398)||(5618069-5618129)
chr1 (338-398)||(6489128-6489188)
chr1 (337-397)||(8853352-8853412)
chr1 (334-398)||(12649916-12649980)
chr1 (338-398)||(34480182-34480242)
chr1 (340-395)||(49564599-49564655)
chr1 (335-398)||(7349765-7349828)
chr1 (339-398)||(29233686-29233745)
chr1 (335-398)||(39672831-39672894)
chr1 (355-398)||(45315512-45315555)
chr1 (336-398)||(730795-730857)
chr1 (340-398)||(4695192-4695250)
chr1 (340-398)||(25267181-25267239)
chr1 (336-398)||(26095484-26095546)
chr1 (340-398)||(28554190-28554248)
chr1 (340-398)||(31289254-31289312)
chr1 (337-398)||(6488868-6488929)
chr1 (337-398)||(29716410-29716471)
chr1 (334-398)||(5618327-5618391)
chr1 (342-398)||(9172846-9172902)
chr1 (342-398)||(9180828-9180884)
chr1 (338-398)||(17504299-17504359)
chr1 (339-395)||(27067190-27067246)
chr1 (342-398)||(39673092-39673148)
chr1 (334-398)||(40934674-40934738)
chr1 (338-398)||(45286230-45286290)
chr1 (335-395)||(47193721-47193781)
chr1 (327-398)||(731055-731126)
chr1 (339-398)||(5586743-5586802)
chr1 (339-398)||(17191197-17191256)
chr1 (339-398)||(25012646-25012705)
chr1 (343-398)||(40770396-40770451)
chr1 (339-398)||(44344022-44344081)
chr1 (339-398)||(44344280-44344339)
chr1 (410-456)||(9172152-9172198)
chr1 (410-456)||(9180134-9180180)
chr1 (340-398)||(40934416-40934474)
chr1 (337-398)||(27065142-27065203)
chr1 (423-460)||(47420314-47420351)
chr1 (338-398)||(8828574-8828634)
chr1 (335-383)||(8853091-8853139)
chr1 (342-398)||(12650178-12650234)
chr1 (331-383)||(26095761-26095813)
chr1 (337-397)||(33128410-33128470)
[»] scaffold0029 (3 HSPs)
scaffold0029 (337-461)||(136913-137038)
scaffold0029 (337-440)||(137158-137262)
scaffold0029 (340-398)||(73629-73687)
[»] scaffold0002 (2 HSPs)
scaffold0002 (337-461)||(330194-330319)
scaffold0002 (337-440)||(330439-330543)
[»] chr3 (76 HSPs)
chr3 (337-461)||(8851801-8851926)
chr3 (340-461)||(37513314-37513436)
chr3 (333-461)||(25847668-25847797)
chr3 (335-461)||(28829975-28830103)
chr3 (337-461)||(11121505-11121631)
chr3 (335-461)||(22316943-22317070)
chr3 (335-461)||(49621202-49621329)
chr3 (339-461)||(9296382-9296504)
chr3 (328-461)||(49711389-49711522)
chr3 (334-461)||(22975568-22975696)
chr3 (343-461)||(36229986-36230106)
chr3 (343-461)||(48433801-48433922)
chr3 (338-461)||(22316718-22316841)
chr3 (336-456)||(3612591-3612713)
chr3 (342-461)||(55009321-55009442)
chr3 (340-461)||(28829753-28829873)
chr3 (335-461)||(23043178-23043309)
chr3 (343-461)||(36229766-36229884)
chr3 (335-461)||(8852029-8852156)
chr3 (341-397)||(48434091-48434147)
chr3 (338-461)||(37513089-37513212)
chr3 (340-398)||(33491692-33491750)
chr3 (339-440)||(55009098-55009198)
chr3 (335-397)||(11121278-11121340)
chr3 (338-440)||(22975343-22975446)
chr3 (339-461)||(25847444-25847566)
chr3 (335-456)||(44506274-44506394)
chr3 (339-461)||(17574372-17574493)
chr3 (340-397)||(23043478-23043535)
chr3 (336-397)||(49711687-49711748)
chr3 (339-398)||(33491601-33491660)
chr3 (343-398)||(44506049-44506104)
chr3 (337-440)||(49620975-49621079)
chr3 (334-398)||(41944132-41944196)
chr3 (343-461)||(49984714-49984833)
chr3 (337-398)||(10687880-10687941)
chr3 (339-398)||(2862700-2862759)
chr3 (335-398)||(31574509-31574572)
chr3 (358-461)||(49984935-49985038)
chr3 (340-398)||(39930633-39930691)
chr3 (336-398)||(50711251-50711313)
chr3 (329-398)||(3612883-3612952)
chr3 (422-458)||(17574596-17574632)
chr3 (334-398)||(25061295-25061359)
chr3 (343-398)||(1342180-1342235)
chr3 (335-398)||(20209145-20209208)
chr3 (335-398)||(44664877-44664940)
chr3 (340-398)||(11220992-11221050)
chr3 (340-398)||(14463379-14463437)
chr3 (340-398)||(44664621-44664679)
chr3 (336-398)||(46292578-46292640)
chr3 (342-398)||(11989517-11989573)
chr3 (334-398)||(15543255-15543319)
chr3 (335-383)||(39778550-39778598)
chr3 (342-398)||(45567410-45567466)
chr3 (339-395)||(50710891-50710947)
chr3 (338-397)||(26845147-26845206)
chr3 (339-398)||(27812566-27812625)
chr3 (339-398)||(38674980-38675039)
chr3 (410-461)||(45278482-45278533)
chr3 (335-398)||(49002232-49002295)
chr3 (335-398)||(53712246-53712309)
chr3 (344-398)||(1341886-1341940)
chr3 (340-398)||(14626392-14626450)
chr3 (336-398)||(21017181-21017243)
chr3 (340-398)||(38675237-38675295)
chr3 (336-398)||(44976749-44976811)
chr3 (340-398)||(50711112-50711170)
chr3 (225-282)||(25080542-25080599)
chr3 (337-398)||(31574248-31574309)
chr3 (342-398)||(6954253-6954309)
chr3 (338-398)||(13997173-13997233)
chr3 (342-398)||(20209406-20209462)
chr3 (338-398)||(43189788-43189848)
chr3 (342-398)||(45214378-45214434)
chr3 (338-398)||(52091713-52091773)
[»] scaffold0311 (1 HSPs)
scaffold0311 (337-456)||(12825-12945)
[»] scaffold0347 (2 HSPs)
scaffold0347 (340-456)||(11940-12055)
scaffold0347 (339-396)||(12223-12280)
[»] scaffold1577 (2 HSPs)
scaffold1577 (409-461)||(943-995)
scaffold1577 (337-398)||(1159-1220)
[»] scaffold0053 (1 HSPs)
scaffold0053 (412-461)||(15112-15161)
[»] scaffold0024 (1 HSPs)
scaffold0024 (337-398)||(107849-107910)
[»] scaffold0003 (1 HSPs)
scaffold0003 (339-398)||(323421-323480)


Alignment Details
Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 28408592 - 28408465
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||  ||||||||||||||    
T  28408592 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaa 28408493  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||    
T  28408492 ataacaacatagttatccttttttatga 28408465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 7417858 - 7417736
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||  |||| ||||||||||||||    
T  7417858 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttttgttataaaataac 7417759  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||    
T  7417758 aacatagttatccttttttatga 7417736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 461
Target Start/End: Complemental strand, 32523556 - 32523426
Alignment:
Q  332 agattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttat 430  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||    
T  32523556 agatttttgccaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttatttgtcacgatttagtcctttatgttat 32523457  T
Q  431 aaaataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||||||    
T  32523456 aaaataacaacatagttatccttttttatga 32523426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 336 - 461
Target Start/End: Original strand, 8437301 - 8437427
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||| |||||||  |||||||||||||||    
T  8437301 tttaggcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttttctgtcatgatttagtcctttatgttataaaa 8437400  T
Q  435 taacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||    
T  8437401 taacaacatagttatccttttttatga 8437427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 343 - 461
Target Start/End: Complemental strand, 32178197 - 32178078
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaac 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||  ||||||||||||||||||||||    
T  32178197 aaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatctttcttttgtcacgatttagtcctttatgttataaaataacaac 32178098  T
Q  442 atagttatccttttttatga 461  Q
    ||||||||||||||||||||    
T  32178097 atagttatccttttttatga 32178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 49114209 - 49114085
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||  || | ||||||||||||    
T  49114209 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctctgtgttataaaata 49114110  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||    
T  49114109 acaacatagttatccttttttatga 49114085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 19305738 - 19305865
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc----nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||| ||||||  ||||||||||||||    
T  19305738 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttttgtcacaatttagtcctttatgttataaa 19305837  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||| ||||    
T  19305838 ataacaacatagttatcctttttcatga 19305865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 339 - 456
Target Start/End: Complemental strand, 31894601 - 31894484
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||        || |||||||||  |||||||||||||||||||    
T  31894601 aggcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttatttttttttgtaacgatttagtcctttatgttataaaataac 31894502  T
Q  439 aacatagttatccttttt 456  Q
    ||||||||||||||||||    
T  31894501 aacatagttatccttttt 31894484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 32832581 - 32832457
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||         |||||||||||  |||||||||||||||||    
T  32832581 taggtaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttatcacgatttagtcctttatgttataaaata 32832482  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||||||||||||||| ||||    
T  32832481 acaatatagttatcctttttcatga 32832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 340 - 456
Target Start/End: Original strand, 1511190 - 1511306
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||        || |||||||||  ||||||||||||||||||||    
T  1511190 ggcaaaattacacaattagtcccttaacttaattttaggtaatattttcgtcctttatttttttttgtaacgatttagtcctttatgttataaaataaca 1511289  T
Q  440 acatagttatccttttt 456  Q
    ||||| |||||||||||    
T  1511290 acataattatccttttt 1511306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 435
Target Start/End: Complemental strand, 1511537 - 1511437
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||       || |||||||||  |||||||||||||||    
T  1511537 ttttaggcaaaattacacaattagtcccttaacttaaatttaggtaacactttcgtcctttatctttttttgtaacgatttagtcctttatgttataaaa 1511438  T
Q  435 t 435  Q
    |    
T  1511437 t 1511437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 2933289 - 2933412
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnng-tcacgatttagctctttatgttataaaataacaac 441  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |||||||||||  ||||||||||||||||||||||    
T  2933289 aaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttatcacgatttagtcctttatgttataaaataacaac 2933388  T
Q  442 ata----gttatccttttttatga 461  Q
    |||    |||||||||||| ||||    
T  2933389 atatatagttatcctttttcatga 2933412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 10878623 - 10878683
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10878623 taggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 10878683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 339 - 454
Target Start/End: Original strand, 24986719 - 24986833
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||         ||||||||||||  ||||||||||||||||||    
T  24986719 aggcaaaattaca--attagtcctttaattttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaataa 24986816  T
Q  438 caacatagttatccttt 454  Q
    |||||||||||||||||    
T  24986817 caacatagttatccttt 24986833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 49113860 - 49113920
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49113860 taggcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttatc 49113920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 8437652 - 8437593
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8437652 aggcaaaattacataattagtcccttaactttattttaggtaacactttcgtcctttatc 8437593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 334 - 461
Target Start/End: Original strand, 32177849 - 32177976
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||        ||||||||||||  |||||||||||||    
T  32177849 atttaaggcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataa 32177948  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    ||| |||| ||  ||||| ||||||||||    
T  32177949 aatgacaatat-cttatcattttttatga 32177976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 44307610 - 44307668
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44307610 aggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 44307668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 45746723 - 45746846
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||   ||||||||||| |||||||||||||||||||||| ||||||||         |||||||||||   || |||||||||||||||    
T  45746723 aggcaaaattacatggttagtcccttacctttattttaggtaacactttcttcctttatttattttttgtcacgatttaatcctctatgttataaaataa 45746822  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  45746823 caacatagttatccttttttatga 45746846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 28408244 - 28408300
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28408244 caaaattacacaattagccccttaactttattttaggtaacactttcgtcctttatc 28408300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 37453410 - 37453354
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37453410 caaaattacacaatcagtcccttaactttattttaggtaacactttcgtcctttatc 37453354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 2933620 - 2933557
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  2933620 attttaggcaaaatagcacaattagttccttaactttattttaggtaacactttcgtcctttat 2933557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 19306091 - 19305968
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||  ||||||||||||||||     
T  19306091 taggcaaaatagcacaattagtcccttaactttattttagttaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatg 19305992  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||  ||||| ||||||||||    
T  19305991 acaatat-cttatcattttttatga 19305968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 7417511 - 7417569
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  7417511 ggcaaaattacacaattaatcccttaactttattttaggtaacattttcgtcctttatc 7417569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 31894257 - 31894315
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  31894257 aggcaaaattacacaaatagtcccttaacttaattttaggtaacactttcgtcctttat 31894315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 351 - 461
Target Start/End: Original strand, 32523212 - 32523322
Alignment:
Q  351 acaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaacatagttat 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| |||| ||  ||||    
T  32523212 acaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatat-cttat 32523310  T
Q  450 ccttttttatga 461  Q
    | ||||||||||    
T  32523311 cattttttatga 32523322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 45747074 - 45746949
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    ||||||||||||||| |||||||||  ||||| |||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||    
T  45747074 ttttaggcaaaattatacaattagtttcttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttag-tctttatgttataaa 45746976  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  45746975 atgacaatat-cttatcattttttatga 45746949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 456
Target Start/End: Complemental strand, 44307964 - 44307845
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttag--ctctttatgttataaaata 436  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||        || || ||||||  || | ||||||||||||||    
T  44307964 ggcaaaattacacaattaatcccttaacttaattttaggtaacattttcgttctttatcttttttttgtaacaatttagtcctttatatgttataaaata 44307865  T
Q  437 acaacatagttatccttttt 456  Q
    ||||||||||||||||||||    
T  44307864 acaacatagttatccttttt 44307845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 339 - 457
Target Start/End: Original strand, 37453080 - 37453196
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    ||||||||||||||||||| | ||| ||||||||||||| |||| ||||  ||||||||        ||||||||||||  |||||||||||||||||||    
T  37453080 aggcaaaattacacaattaattcct-aactttattttagataacgcttttatcctttat-tttttttgtcacgatttagtcctttatgttataaaataac 37453177  T
Q  439 aacatagttatcctttttt 457  Q
    |||||||||||| ||||||    
T  37453178 aacatagttatcttttttt 37453196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 30060393 - 30060520
Alignment:
Q  329 aatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgtt 428  Q
    |||| ||||||||||||||||||| |    | |||||| || |||||||||||| |||| ||||||||||       ||| ||||||||  |||||||||    
T  30060393 aataaattttaggcaaaattacacgaaccattccttaagttaattttaggtaactcttttgtcctttatctttttttgtcccgatttagtcctttatgtt 30060492  T
Q  429 ataaaataacaacatagttatccttttt 456  Q
    |||||||| ||||||||| |||||||||    
T  30060493 ataaaatatcaacatagtcatccttttt 30060520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 455
Target Start/End: Complemental strand, 29226611 - 29226491
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctc-tttatgttataaa 433  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||| ||| ||||||||| |||||        | ||| ||||||| | ||| |||||||||    
T  29226611 ttttaggcaaaattacacaattagtcctttaac-ttaatttagataatactttcgtcatttatttatttttgccaccatttagcccttttttgttataaa 29226513  T
Q  434 ataacaacatagttatcctttt 455  Q
    |||||||| |||||||||||||    
T  29226512 ataacaacgtagttatcctttt 29226491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 45055316 - 45055380
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  45055316 attttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 45055380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 7172930 - 7172989
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  || |||||||||||||||||||||||||| ||| ||||||||||    
T  7172930 aggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatc 7172989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 398
Target Start/End: Complemental strand, 10543733 - 10543667
Alignment:
Q  332 agattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||| |||  |||||||||    
T  10543733 agattttaggcaatattacatgtttagtcccttaactttattttaggtaacagtttgatcctttatc 10543667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 38495232 - 38495170
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  38495232 tttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 38495170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 8869584 - 8869640
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||  |||||||||    
T  8869584 caaaattacacaattcgtcccttaacttaattttaggtaacattttattcctttatc 8869640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 23036641 - 23036705
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||||| ||| ||| ||||||    
T  23036641 attttaggcaaaattacaattttagtcccttaacttaattttaggtaacagtttagtcttttatc 23036705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 43575366 - 43575306
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  43575366 taggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatc 43575306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 45055638 - 45055578
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  45055638 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 45055578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 8522323 - 8522382
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  8522323 aggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatc 8522382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 8522631 - 8522568
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  8522631 ttttaggtaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 8522568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 10878980 - 10878921
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||| ||||||||||||||||| ||||||||| ||||||| ||| | |||||||||||||    
T  10878980 taggaaaaattacacaattagtaccttaacttaattttagctaatattttcgtcctttat 10878921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 31283472 - 31283409
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||| |||||| |||||| ||| ||||||||||    
T  31283472 tttttggcaaaattacacttttagtcccttaacttaattttatgtaacagtttggtcctttatc 31283409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 32832234 - 32832281
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacacttt 387  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||||    
T  32832234 ggcaaaataatacaattagtcccttaattttattttaggtaacacttt 32832281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 41922281 - 41922340
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  41922281 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 41922340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 12423845 - 12423903
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  12423845 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 12423903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 21733068 - 21733126
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| |||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  21733068 ggcaaaattacactattagtcccttaacttaatttcaggtaacagtttggtcttttatc 21733126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 34287831 - 34287773
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||   ||||||||||||||| |||| |||||||||||| ||||||||||    
T  34287831 ggcaaaattacaattttagtcccttaacttaatttcaggtaacactttggtcctttatc 34287773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 42391296 - 42391354
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  42391296 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 42391354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 44458098 - 44458040
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  44458098 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 44458040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 21555880 - 21555949
Alignment:
Q  329 aatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||| | ||||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  21555880 aatagaatataggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttagtcctttatc 21555949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 29099492 - 29099431
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||||| |||  ||||||||    
T  29099492 tttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 29099431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 398
Target Start/End: Original strand, 37452478 - 37452511
Alignment:
Q  365 aactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||||||||||||||    
T  37452478 aactttattttaggtaacactttcgtcctttatc 37452511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 43161703 - 43161650
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcct 393  Q
    ||||||||||||||||| |||||||||||| |||| || ||| |||||||||||    
T  43161703 ggcaaaattacacaatttgtcccttaacttaatttcagctaatactttcgtcct 43161650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 8114574 - 8114630
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgt 390  Q
    ||||| ||||||||||||||| |  ||||||||||| |||||||||||| |||||||    
T  8114574 atttttggcaaaattacacaaattatcccttaacttaattttaggtaactctttcgt 8114630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 8115032 - 8114972
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||| |||||||||||| |||| | |||||| ||| ||| ||||||    
T  8115032 taggcaaaattacacaatttgtcccttaacttaatttcaagtaacatttttgtcatttatc 8114972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 8871543 - 8871487
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| ||||||| |||||||||||| ||||||||||||| |||  |||||||||    
T  8871543 caaaattccacaattcgtcccttaacttaattttaggtaacattttattcctttatc 8871487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 24331377 - 24331437
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  24331377 taggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 24331437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 45062374 - 45062318
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  45062374 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 45062318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 7149294 - 7149349
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  7149294 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 7149349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 8805739 - 8805802
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| |||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  8805739 ttttaggtaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 8805802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 8806055 - 8806000
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  8806055 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 8806000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 10360400 - 10360463
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||| || || |||  ||||||| ||||||||||||| |||||| |||||||    
T  10360400 ttttaggcaaaattactcattttgtcatttaacttaattttaggtaacaatttcgttctttatc 10360463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Complemental strand, 10878890 - 10878855
Alignment:
Q  421 tttatgttataaaataacaacatagttatccttttt 456  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10878890 tttatgttataaaataacaacattgttatccttttt 10878855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 12424157 - 12424102
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  12424157 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 12424102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 21455869 - 21455810
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||| |||||| || ||||||||||||| ||| ||||||||||    
T  21455869 aggcaaaattacacttttagttccttaatttaattttaggtaacaatttggtcctttatc 21455810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 38494913 - 38494972
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| ||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  38494913 aggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 38494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 43699925 - 43699980
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||| ||||||| ||||| ||| ||||||||||    
T  43699925 aaaattacacttttagtcccttaacttaattttagataacagtttggtcctttatc 43699980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 45867444 - 45867503
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| | |||||| ||| ||||||||||    
T  45867444 aggcaaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatc 45867503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 47222014 - 47221951
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||| ||||||||| |||| |||||||| ||| ||||||||||    
T  47222014 tttttggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatc 47221951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 49023576 - 49023635
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  49023576 aggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 49023635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 20121206 - 20121264
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| ||||  ||||||| ||| ||||||||||    
T  20121206 ggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatc 20121264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 31813730 - 31813788
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  31813730 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 31813788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 32072260 - 32072202
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||| |  |||| ||||||||||| ||||| ||||||| ||||||||||||||    
T  32072260 ggcaaaattataatattaatcccttaacttaatttttggtaacaatttcgtcctttatc 32072202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 34287516 - 34287574
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||| || |||||||| ||||||||||||| ||| ||||||||||    
T  34287516 ggcaaaattacacttttactctcttaacttaattttaggtaacagtttggtcctttatc 34287574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 41857454 - 41857396
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| ||||  ||||||| ||| ||||||||||    
T  41857454 ggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatc 41857396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 42391610 - 42391552
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||| ||||    
T  42391610 ggcaaaattacacttttagtcccttaacttgatttcaggtaacagtttggtcctctatc 42391552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 8871235 - 8871292
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||| |||| ||||||| ||||   |||||||||||||| |||||    
T  8871235 ggcaaaattacacaattcgtccattaacttaatttctagtaacactttcgtcttttat 8871292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 21733385 - 21733324
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||    ||||| |||||||| |||| |||||||| ||||||||||||||    
T  21733385 ttaggcaaaattacatttatagtctcttaacttaatttcaggtaacaatttcgtcctttatc 21733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 4030921 - 4030865
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||| |||  |||| || |||||||||||| ||||||| |||||||    
T  4030921 caaaattacacaatttgtcttttaatttgattttaggtaaccctttcgttctttatc 4030865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 7173251 - 7173187
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||| ||||||||||  ||| ||||||||||| |||| |||||||| |||  |||||||||    
T  7173251 attttaggtaaaattacacttttaatcccttaacttaatttcaggtaacagtttgatcctttatc 7173187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 19124825 - 19124889
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| |||||||||||||  ||| ||||||||||| | ||||||||||| |||  |||||||||    
T  19124825 atttttggcaaaattacacttttaatcccttaacttaagtttaggtaacaatttgatcctttatc 19124889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 23552292 - 23552228
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| ||||||||||| || ||  ||| ||||||| |||| || ||||||||||||||||||||    
T  23552292 atttttggcaaaattactcattttatccgttaacttaatttcagataacactttcgtcctttatc 23552228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 29706936 - 29706876
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||| || | ||||| ||||||  |||||||||||  ||||||||||||||    
T  29706936 taggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttatc 29706876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 31115832 - 31115880
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    |||||| |||||||||||  ||||||||||||||| |||| ||||||||    
T  31115832 ttttagacaaaattacacttttagtcccttaacttaatttcaggtaaca 31115880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 46426663 - 46426719
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||| ||| ||||||| ||||||||||||| ||| ||||||||||    
T  46426663 caaaattacacttttaatcctttaacttaattttaggtaacaatttggtcctttatc 46426719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 47221705 - 47221765
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  47221705 taggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 47221765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 157 - 340
Target Start/End: Original strand, 1091086 - 1091270
Alignment:
Q  157 aatggcaatcaaagaaagacaatgaaaatgaatagaaa------catggaaaataatagaactctgggcaaggaaaaggttttttcatgcttaagtgtta 250  Q
    ||||| ||||||||||||||||||| ||||||||||||      |||||||||||||||||| || || ||||||| |||||||||||||||||||||||    
T  1091086 aatggtaatcaaagaaagacaatgataatgaatagaaatttggacatggaaaataatagaacactcggtaaggaaa-ggttttttcatgcttaagtgtta 1091184  T
Q  251 atgtcacgatgattgaattaacacgtagtgaaatgaggtagcaccttaaatctataaagtgaaattattcttgaacttaatagattttag 340  Q
    ||||||||| |||||||| |||||||||| |||||    |||| |||||||||||||||| ||| || ||||||||||||||||||||||    
T  1091185 atgtcacgaggattgaatgaacacgtagtaaaatg----agcatcttaaatctataaagtaaaaatactcttgaacttaatagattttag 1091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 33595670 - 33595543
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  33595670 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 33595571  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||    
T  33595570 ataacaacatagttatccttttttatga 33595543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 461
Target Start/End: Complemental strand, 4243280 - 4243146
Alignment:
Q  328 taatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatg 426  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||  |||||||    
T  4243280 taataaattttaggcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatg 4243181  T
Q  427 ttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||||||||||    
T  4243180 ttataaaataacaacatagttatccttttttatga 4243146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 23068695 - 23068818
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||||    
T  23068695 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataa 23068794  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  23068795 caacatagttatccttttttatga 23068818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 6755267 - 6755140
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        ||||||||||||  ||||||||||||||    
T  6755267 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaa 6755168  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||    
T  6755167 ataacaacatagttatccttttttatga 6755140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 341 - 461
Target Start/End: Original strand, 3218152 - 3218273
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta-tcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        ||||||||||||  ||||||||||||||||||||    
T  3218152 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaataaca 3218251  T
Q  440 acatagttatccttttttatga 461  Q
    ||||||||||||||||||||||    
T  3218252 acatagttatccttttttatga 3218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 34247537 - 34247412
Alignment:
Q  215 tgggcaaggaaaaggttttttcatgcttaagtgttaatgtcacgatgattgaattaacacgtagtgaa-atgaggtagcaccttaaatctataaagtgaa 313  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||  ||||| | |||||||| || ||||||||||    
T  34247537 tgggcaaggaaa-ggttttttcatgcttaagtgttaatgtcacaaggattgaattaacacgtagtgaagttgaggcaacaccttaactccataaagtgaa 34247439  T
Q  314 attattcttgaacttaatagattttag 340  Q
    |||| ||||||| ||||||||||||||    
T  34247438 attactcttgaatttaatagattttag 34247412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 339 - 457
Target Start/End: Complemental strand, 14763654 - 14763533
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc---nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||  |||| |||||||||||    
T  14763654 aggcaaaattacacaattagtcccttaactttattttaggtaagactttcgtcctttatcttttttttttgtcacgatttagtcctttttgttataaaat 14763555  T
Q  436 aacaacatagttatcctttttt 457  Q
    ||||||||||||||||||||||    
T  14763554 aacaacatagttatcctttttt 14763533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 3922538 - 3922661
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||  ||||||||||||||| ||    
T  3922538 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgaattagtcctttatgttataaaaaaa 3922637  T
Q  438 caacatagttatccttttttatga 461  Q
     || | ||||||||||||||||||    
T  3922638 aaaaaaagttatccttttttatga 3922661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 3218488 - 3218385
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||     
T  3218488 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatg 3218389  T
Q  437 acaa 440  Q
    ||||    
T  3218388 acaa 3218385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 3922889 - 3922763
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  3922889 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 3922790  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  3922789 atgacaatat-cttatcattttttatga 3922763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 23069042 - 23068922
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||       |||||||||||| ||||||||||||||||| ||    
T  23069042 aggcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcatttatctttttttgtcacgatttag-tctttatgttataaaatgac 23068944  T
Q  439 aacatagttatccttttttatga 461  Q
    || ||  ||||| ||||||||||    
T  23068943 aatat-cttatcattttttatga 23068922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 461
Target Start/End: Original strand, 4242919 - 4243044
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||    
T  4242919 tttaggcaaaattacacaattagtcctttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaa 4243018  T
Q  435 taacaacatagttatccttttttatga 461  Q
    | |||| ||  ||||| ||||||||||    
T  4243019 tgacaatat-cttatcattttttatga 4243044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 461
Target Start/End: Original strand, 33595320 - 33595440
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||        ||||||||||||  |||||||||||||||| |||    
T  33595320 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 33595419  T
Q  440 acatagttatccttttttatga 461  Q
    | ||  ||||| ||||||||||    
T  33595420 atat-cttatcattttttatga 33595440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 14763312 - 14763376
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  14763312 attttaagcaaaattatacaatcagtcccttaactttattttaggtaacactttcgtactttatc 14763376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 10810324 - 10810263
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||| | ||||||||||    
T  10810324 ttaggcaaaattacacaattagtcctttaatttaattttaggtaacactcttgtcctttatc 10810263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 421 - 461
Target Start/End: Original strand, 10810059 - 10810099
Alignment:
Q  421 tttatgttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10810059 tttatgttataaaataacaacatagttatccttttttatga 10810099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 14655078 - 14655134
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  14655078 caaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatc 14655134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 22569083 - 22569019
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||| ||||||||||  ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  22569083 attttaggtaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 22569019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 28852188 - 28852246
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  28852188 ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 28852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 2316806 - 2316745
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  2316806 ttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 2316745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 9899511 - 9899451
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  9899511 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 9899451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 10027184 - 10027124
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||| ||||||| || |||||||||||||| ||||||||||||| ||| |||||||||    
T  10027184 ttaggcataattacataaatagtcccttaacttaattttaggtaacattttggtcctttat 10027124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 13178539 - 13178479
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  13178539 taggcaaaattacagttttagtcccttaacttaattttaggtaacattttggtcctttatc 13178479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 9899194 - 9899253
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  9899194 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 9899253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 24896488 - 24896429
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  || |||||||||||||||||||||||||| ||| ||| ||||||    
T  24896488 aggcaaaattacacttttggtcccttaactttattttaggtaacagtttagtcatttatc 24896429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 30121639 - 30121584
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||| || |||| |||| || ||||||||||||||||||||||||||||    
T  30121639 aaaattacacatttcgtcctttaaattaattttaggtaacactttcgtcctttatc 30121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 1925466 - 1925408
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| |||||||||    
T  1925466 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 1925408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 10026140 - 10026198
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||| || |||||||||||||| ||||||||||||  ||| ||||||||||    
T  10026140 ggcaaaattacataaatagtcccttaacttaattttaggtaacgttttagtcctttatc 10026198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 21926063 - 21926121
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| |||||||||    
T  21926063 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 21926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 1925114 - 1925174
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||| | ||| ||||||||||    
T  1925114 taggcaaaattacacttttagtcccttaacttaatttcaggtaaaagtttagtcctttatc 1925174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 2863574 - 2863638
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| ||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  2863574 atttttggcaaaattacaattttagtcccttaacttaatttcaggtaacagtttggtcctttatc 2863638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 2882877 - 2882941
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| ||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  2882877 atttttggcaaaattacaattttagtcccttaacttaatttcaggtaacagtttggtcctttatc 2882941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 6754946 - 6755038
Alignment:
Q  368 tttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||||||| ||||| ||||||||||       ||||||||||||  |||||||||||||||| |||| ||  ||||| ||||||||||    
T  6754946 tttattttaggtaatacttttgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaatat-cttatcattttttatga 6755038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 17853959 - 17853899
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| || ||||| ||| ||||||||||    
T  17853959 taggcaaaattacacttttagtcccttaacttaatttcagataacagtttggtcctttatc 17853899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 395
Target Start/End: Original strand, 25121521 - 25121581
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 395  Q
    ||||||||||||||||||  |||||| |||||||| |||| |||||||| ||| |||||||    
T  25121521 ttttaggcaaaattacacgtttagtctcttaacttaatttcaggtaacaatttggtccttt 25121581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 8129848 - 8129789
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||| ||| ||||||||||| |||| |||||||| ||| ||| ||||||    
T  8129848 aggcaaaattacacatttaatcccttaacttaatttcaggtaacagtttggtcatttatc 8129789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 32557436 - 32557393
Alignment:
Q  355 ttagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  32557436 ttagtcccttaacttaattttaggtaacaatttggtcctttatc 32557393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 7920485 - 7920543
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||| |||||||||  |||||| ||||||||||||| ||  ||||||||||    
T  7920485 ggcaaaattacataattagtcctctaacttaattttaggtaacaattcagtcctttatc 7920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 9546725 - 9546667
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| |||  |||||||||    
T  9546725 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatc 9546667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 22568759 - 22568821
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||    ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  22568759 tttaggcaaaattacttttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 22568821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 24325307 - 24325249
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  24325307 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 24325249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 25121811 - 25121753
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||| ||||||| |||| |||||||| ||| ||||||||||    
T  25121811 ggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatc 25121753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 12346067 - 12346128
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||| |||||||||||||||| |||| ||||| | |||||  || |||||||||||||||||    
T  12346067 tttaagcaaaattacacaattcgtccattaacataattttcagtgacactttcgtcctttat 12346128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 9220105 - 9220161
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| |||||||| |||  |||||||||    
T  9220105 caaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatc 9220161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 20491530 - 20491586
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||| |||| |||  ||||||| ||||||||||||| ||||||| ||||||    
T  20491530 caaaattacataatttgtcttttaacttaattttaggtaacattttcgtcttttatc 20491586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 35483053 - 35482925
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||  |||||||||||||    
T  35483053 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcctttatgttataa 35482954  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||||    
T  35482953 aataacaacatagttatccttttttatga 35482925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 2968216 - 2968093
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||||    
T  2968216 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataa 2968117  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  2968116 caacatagttatccttttttatga 2968093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 10682059 - 10682182
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||       ||||||||||||  ||||||||||||||||||    
T  10682059 taggcaaaattacacaattaatcccttaactttattttaggtaacactttcgttctttatcttttttagtcacgatttagtcctttatgttataaaataa 10682158  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  10682159 caacatagttatccttttttatga 10682182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 17876117 - 17875993
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  || ||||||||||||||    
T  17876117 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctctatgttataaaata 17876018  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||    
T  17876017 acaacatagttatccttttttatga 17875993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 14577216 - 14577087
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc---nnnnnnngtcacgatttagctctttatgttata 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  || |||||||||    
T  14577216 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctctatgttata 14577117  T
Q  432 aaataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||||    
T  14577116 aaataacaacatagttatccttttttatga 14577087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 30904360 - 30904483
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||| |||||||  ||||||||||||||||||    
T  30904360 aggcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcaggatttagtcctttatgttataaaataa 30904459  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  30904460 caacatagttatccttttttatga 30904483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 27912446 - 27912321
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||   |||||||||||||||    
T  27912446 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttataaaat 27912347  T
Q  436 aacaacatagttatccttttttatga 461  Q
    ||||| ||||||||||||||| ||||    
T  27912346 aacaagatagttatcctttttcatga 27912321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 27958865 - 27958740
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||   |||||||||||||||    
T  27958865 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttataaaat 27958766  T
Q  436 aacaacatagttatccttttttatga 461  Q
    ||||| ||||||||||||||| ||||    
T  27958765 aacaagatagttatcctttttcatga 27958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 30904705 - 30904585
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||  |||||||||||||||| |||    
T  30904705 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgaca 30904606  T
Q  440 acatagttatccttttttatga 461  Q
    | ||  ||||| ||||||||||    
T  30904605 atat-cttatcattttttatga 30904585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 35482700 - 35482823
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||     
T  35482700 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatg 35482799  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||  ||||| ||||||||||    
T  35482800 acaatat-cttatcattttttatga 35482823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 338 - 456
Target Start/End: Complemental strand, 3691933 - 3691814
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||        || |||||||||  |||||||||||||||||    
T  3691933 taggcaaaattacacaattaatcccttcacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaata 3691834  T
Q  437 acaacatagttatccttttt 456  Q
    ||||||||||||||||||||    
T  3691833 acaacatagttatccttttt 3691814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 327 - 461
Target Start/End: Original strand, 17875755 - 17875889
Alignment:
Q  327 ttaatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttat 425  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||    
T  17875755 ttaatatatttttgggaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttat 17875854  T
Q  426 gttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||| |||| ||  ||||| ||||||||||    
T  17875855 gttataaaatgacaatat-cttatcattttttatga 17875889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 13327262 - 13327385
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta--tcnnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||  |        || |||||||||   |||||||||||||||||    
T  13327262 ggcaaaattacacaattagttccttaacttaattttaggtaacactttcatcctttatttttttttttgtaacgatttagtcatttatgttataaaataa 13327361  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  13327362 caacatagttatccttttttatga 13327385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 440
Target Start/End: Original strand, 2967858 - 2967971
Alignment:
Q  328 taatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatg 426  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||  |||||||    
T  2967858 taattgattttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcatttatcttatttttgtcacgatttagtcctttatg 2967957  T
Q  427 ttataaaataacaa 440  Q
    ||||||||| ||||    
T  2967958 ttataaaatgacaa 2967971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 27912090 - 27912217
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||  |||||||||||||    
T  27912090 ttttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataa 27912189  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    ||| |||| ||  ||||| ||||||||||    
T  27912190 aattacaatat-cttatcattttttatga 27912217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 27958509 - 27958636
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||  |||||||||||||    
T  27958509 ttttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataa 27958608  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    ||| |||| ||  ||||| ||||||||||    
T  27958609 aattacaatat-cttatcattttttatga 27958636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 3691573 - 3691640
Alignment:
Q  331 tagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  3691573 tagattataggcaaaattacacaattagtcccttaacataattttaggtaacactttcgtcctttatc 3691640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 20178370 - 20178428
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20178370 aggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20178428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 20223098 - 20223156
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20223098 aggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20223156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 30928658 - 30928600
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30928658 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 30928600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 4129085 - 4128969
Alignment:
Q  343 aaaattacacaattagtcccttaact---ttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    ||||||||||||||||||||||||||   | ||||||| ||||| ||| ||||||||||       || |||||||||  ||||||||||||||||||||    
T  4129085 aaaattacacaattagtcccttaactaattaattttagataacatttttgtcctttatctttttttgtaacgatttaggcctttatgttataaaataaca 4128986  T
Q  440 acatagttatccttttt 456  Q
    |||||||||||||||||    
T  4128985 acatagttatccttttt 4128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 334 - 459
Target Start/End: Complemental strand, 38464988 - 38464863
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataa 432  Q
    ||||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||        ||| ||||||||   ||||||||||||    
T  38464988 atttttggcaaaattacacaattcatccctta-ctttattttaggtaacactttcgtcctttatcttttttttgtcccgatttagtcttttatgttataa 38464890  T
Q  433 aataacaacatagttatccttttttat 459  Q
    |||| |||||||||||||| |||||||    
T  38464889 aatatcaacatagttatccctttttat 38464863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 17844224 - 17844169
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17844224 caaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 17844169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 23792926 - 23792830
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||       || |||||||||  ||||||||||||||||    
T  23792926 aggcaaaataacacaattagtcccttaacttaattttaggtaacacttttgtcctttatctttttttgtaacgatttagtcctttatgttataaaat 23792830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 10682411 - 10682349
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10682411 ttttaggtgaaattacacaattagtcccttaactttattttaggaaacactttcgtcctttat 10682349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 30928309 - 30928431
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat--cnnnnnnngtcacgatttagctctttatgttataaa 433  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||          || ||||||| |  ||||||||||||||    
T  30928309 tttagacaaaattacacaattagtcccttaacttaattttaggtaacatttttgtcctttattattttttttgtaacgattttgtcctttatgttataaa 30928408  T
Q  434 ataacaacatagttatccttttt 456  Q
    ||| |||||||||||||||||||    
T  30928409 ataccaacatagttatccttttt 30928431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 456
Target Start/End: Original strand, 42123703 - 42123818
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaa 440  Q
    ||||||||||||||||||||||||||||| ||||||| ||| | |||| |||||||||          ||||| |||  |||||||||||||||||||||    
T  42123703 gcaaaattacacaattagtcccttaacttaattttagataatattttcatcctttatcttttttttgtacgatatagtcctttatgttataaaataacaa 42123802  T
Q  441 catagttatccttttt 456  Q
    ||||||||||||||||    
T  42123803 catagttatccttttt 42123818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 44379522 - 44379580
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  44379522 ggcaaaattacacaattaatcccttaacttaattttaggtaacactttcgtcctttatc 44379580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 456
Target Start/End: Complemental strand, 7900109 - 7899992
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    ||||||||||||| ||||||| |||||| || ||||||  ||||| |||||||||||||        || |||||||||  |||||||||||||||||||    
T  7900109 aggcaaaattacagaattagttccttaatttaattttatctaacattttcgtcctttatatttttttgtaacgatttagtcctttatgttataaaataac 7900010  T
Q  439 aacatagttatccttttt 456  Q
    ||||| ||||||||||||    
T  7900009 aacattgttatccttttt 7899992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 456
Target Start/End: Complemental strand, 20223452 - 20223333
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttag--ctctttatgttataaaata 436  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||        || || ||||||  || | ||||||||||||||    
T  20223452 ggcaaaattacacaattaatcccttaacttaattttaggtaacattttcgttctttatcttttttttgtaacaatttagtcctttatatgttataaaata 20223353  T
Q  437 acaacatagttatccttttt 456  Q
    ||||||||||||||||||||    
T  20223352 acaacatagttatccttttt 20223333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 30253945 - 30253882
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  30253945 tttttggcaaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatc 30253882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 21661041 - 21660983
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||    
T  21661041 ggcaaaattacacatttagtcccttaactttattttaggtaacggtttagtcctttatc 21660983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 448
Target Start/End: Complemental strand, 44379875 - 44379763
Alignment:
Q  340 ggcaaaattacacaat---tagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||   |||| ||||||||| ||||||||||||| |||||| |||||||        || |||||||||  ||||||||||||||||    
T  44379875 ggcaaaattacacaataattagttccttaacttaattttaggtaacattttcgttctttatcttttttttgtaacgatttagtcctttatgttataaaat 44379776  T
Q  436 aacaacatagtta 448  Q
    |||||||||||||    
T  44379775 aacaacatagtta 44379763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 148287 - 148351
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||  || |||||||||||| ||||||||||||| ||| ||||||||||    
T  148287 attttaggcaaaattacacttttggtcccttaacttaattttaggtaacaatttggtcctttatc 148351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 38464641 - 38464761
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    ||||||||||||||| | |||||||||||| | || |||||||||||| ||||||||||       ||| ||||||||  |||||||||||||||| |||    
T  38464641 ggcaaaattacacaactcgtcccttaacttaaattcaggtaacacttttgtcctttatctttttttgtcccgatttagtcctttatgttataaaatgaca 38464740  T
Q  440 acatagttatccttttttatga 461  Q
    | ||  ||||| ||||||||||    
T  38464741 atat-cttatcattttttatga 38464761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 30463913 - 30463972
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||   ||||||||||||||||||||||||||||| ||| ||||||||||    
T  30463913 aggcaaaattacatttttagtcccttaactttattttaggtaacagtttagtcctttatc 30463972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 34213388 - 34213443
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  34213388 aaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatc 34213443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 42124055 - 42123992
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||||| ||||||    
T  42124055 ttttaggcaaaattacacaattaatttcttaatttaattttaggtaacactttcgtcatttatc 42123992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 13327611 - 13327550
Alignment:
Q  339 aggcaaaattacacaattagtcccttaac--tttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||| ||||||||||||||||  || ||||||||||||||||||||| ||||||    
T  13327611 aggcaaaattacgcaattagtcccttaacaattaattttaggtaacactttcgtcttttatc 13327550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 27523301 - 27523243
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||| |||| ||||||| ||||||| |||||||||| ||||||||    
T  27523301 aggcaaaattacacaattcgtcctttaacttaattttagttaacactttcatcctttat 27523243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 28828530 - 28828472
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||||||||||||||| | ||| ||||||||||    
T  28828530 ggcaaaattacacttttagtcccttaactttattttaggtaataatttagtcctttatc 28828472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 21660723 - 21660784
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  21660723 ttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 21660784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 13795516 - 13795572
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||| |||||||||||| ||||||| ||||| ||||||| ||||||    
T  13795516 caaaattacacaattcgtcccttaacttaattttagctaacattttcgtcatttatc 13795572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 27712762 - 27712822
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||||||  |||||||||||| |||||||||||||||| ||| ||||||||||    
T  27712762 tagggaaaattacacttttagtcccttaattttattttaggtaacagtttagtcctttatc 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 27713084 - 27713020
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  27713084 atttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 27713020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 37727201 - 37727257
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  |||||||||||||||||||| |||||||| ||| ||||||||||    
T  37727201 caaaattacacttttagtcccttaactttatttcaggtaacagtttagtcctttatc 37727257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 4128752 - 4128799
Alignment:
Q  351 acaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||    
T  4128752 acaattagtcctttaatttaattttaggtaacactttcgtcctttatc 4128799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 26938496 - 26938441
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||  ||||||||||||||| ||||||||||||| ||| |||||||||    
T  26938496 caaaattacacttttagtcccttaacttaattttaggtaacaatttagtcctttat 26938441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 33279253 - 33279194
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  33279253 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 33279194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 34632224 - 34632283
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||| ||| ||||||||||    
T  34632224 aggcaaaattacacttttgatcccttaactttattttaggtaacaatttagtcctttatc 34632283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 42684782 - 42684845
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| || |||||||    
T  42684782 ttttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggttctttatc 42684845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 10925416 - 10925358
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  |||||||||||||||||||||||||| || |||  |||||||||    
T  10925416 ggcaaaattacacttttagtcccttaactttattttaggtatcaatttaatcctttatc 10925358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 458
Target Start/End: Complemental strand, 17866390 - 17866275
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaaca 442  Q
    |||||||||||||| |||||||||||| || ||| |||||| ||||||| ||||||       |||  |||||||   |||||||||||||||  ||| |    
T  17866390 aaaattacacaattcgtcccttaacttaatattatgtaacattttcgtcatttatctttttttgtcctgatttagtcatttatgttataaaatgtcaaaa 17866291  T
Q  443 tagttatcctttttta 458  Q
    || |||||||||||||    
T  17866290 taattatcctttttta 17866275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 34199149 - 34199091
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  | ||||||||||||| ||||||||||||| ||| ||||||||||    
T  34199149 ggcaaaattacactttcagtcccttaacttaattttaggtaacagtttggtcctttatc 34199091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 36556853 - 36556791
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  36556853 tttaggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 36556791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 461
Target Start/End: Original strand, 27523040 - 27523077
Alignment:
Q  424 atgttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||||| |||||||||||||||||||||||||    
T  27523040 atgttataaaatgacaacatagttatccttttttatga 27523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 29596403 - 29596460
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  29596403 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 29596460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 39198614 - 39198671
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta 396  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||    
T  39198614 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttta 39198671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 39198933 - 39198872
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  39198933 ttaggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 39198872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 17843883 - 17844005
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn----gtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||| |||  ||||||| |||||| ||| || ||||||||||||||           |||||||||||   ||||||| |||||||| ||    
T  17843883 aaaattacacaattggtcttttaacttaattttaagtatcaatttcgtcctttatcttcttttttttgtcacgatttaatcctttatgatataaaatgac 17843982  T
Q  439 aacatagttatccttttttatga 461  Q
    ||||| |||||||||||||||||    
T  17843983 aacatggttatccttttttatga 17844005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 18929700 - 18929760
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||| ||||||||||||||| |||| || ||||| | | ||||||||||    
T  18929700 taggcaaaattacacatttagtcccttaacttaatttcagataacagtatggtcctttatc 18929760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 28828210 - 28828274
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| |||||||||||  ||||||||||||||| |||| | |||||| ||| ||||||||||    
T  28828210 attttagacaaaattacacttttagtcccttaacttaatttcaagtaacaatttggtcctttatc 28828274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 26187142 - 26187188
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    ||||||||||||||||  |||||||| |||||| |||||||||||||    
T  26187142 ttaggcaaaattacacctttagtcccataacttaattttaggtaaca 26187188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 34632543 - 34632481
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||| |||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  34632543 tttaggtaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 34632481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 2241468 - 2241529
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||| |||  ||||||||||||||| |||| |||||| | ||| ||||||||||    
T  2241468 ttaggcaaaatttcacttttagtcccttaacttaatttcaggtaatagtttggtcctttatc 2241529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 14161555 - 14161494
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||| || | ||||| ||||||  |||||||||||  ||||||||||||||    
T  14161555 ttaggcaaaattacagaaatggtcccataacttatttttaggtaacgttttcgtcctttatc 14161494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 30253628 - 30253684
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  30253628 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 30253684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 40277549 - 40277485
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| |||||||||||||  |||||| |||||||| ||||||||||| | ||| ||| ||||||    
T  40277549 atttttggcaaaattacacttttagtcacttaacttaattttaggtaatagtttggtcttttatc 40277485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 13294953 - 13294826
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  13294953 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 13294854  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||| ||||    
T  13294853 ataacaacatagttatcctttttcatga 13294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 49621784 - 49621661
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||||    
T  49621784 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataa 49621685  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  49621684 caacatagttatccttttttatga 49621661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 23163281 - 23163403
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||||||    
T  23163281 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataac 23163380  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||    
T  23163381 aacatagttatccttttttatga 23163403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 33692608 - 33692486
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||       ||||||||||||  || ||||||||||||||||    
T  33692608 aggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcatttatctttttttgtcacgatttagtcctctatgttataaaataac 33692509  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||    
T  33692508 aacatagttatccttttttatga 33692486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 42856801 - 42856925
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||   ||||||||||||||||    
T  42856801 ttaggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttattttttttggtcacgatttagtcttttatgttataaaata 42856900  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||||||||||||| ||||||||||    
T  42856901 acaacatagttatcattttttatga 42856925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 52690094 - 52690217
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||       ||||||||||||  || |||||||||||||||    
T  52690094 taggcaaaattacacaattagtcgcttaactttattttaggtaatattttcgtcctttatctttttttgtcacgatttagtcctctatgttataaaataa 52690193  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  52690194 caacatagttatccttttttatga 52690217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 341 - 461
Target Start/End: Original strand, 46143273 - 46143394
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||        ||||| ||||||  ||||||||||||||||||||    
T  46143273 gcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatcttttttttgtcacaatttagtcctttatgttataaaataaca 46143372  T
Q  440 acatagttatccttttttatga 461  Q
    ||||||||||||||||||||||    
T  46143373 acatagttatccttttttatga 46143394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 50161118 - 50161237
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc---nnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  ||||||||||||||||||||    
T  50161118 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataaaataaca 50161217  T
Q  440 acatagttatccttttttat 459  Q
    ||||||||||| ||||||||    
T  50161218 acatagttatctttttttat 50161237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 33369859 - 33369735
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||||    
T  33369859 taggtaaaattacacaattagtctcttaactatattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaata 33369760  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||||||||||||| ||||||||||    
T  33369759 acaacatagttatcattttttatga 33369735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 20930974 - 20931097
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||   |||||||||||||||||    
T  20930974 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcttttatgttataaaataa 20931073  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| |||||| |||||||||||||    
T  20931074 caatatagttgtccttttttatga 20931097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 55742954 - 55742831
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta-tcnnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |        ||||||||||||  || |||||||||||||||    
T  55742954 aggcaaaattacacaattagtcctttaactttattttagataacactttcgtcctttattttttttttgtcacgatttagtcctctatgttataaaataa 55742855  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  55742854 caacatagttatccttttttatga 55742831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 461
Target Start/End: Original strand, 28458523 - 28458644
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||         ||||||||||||  ||||||||||||||||||||    
T  28458523 caaaattacacaattagtcccttaacattattttaggtaacacttccgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataaca 28458622  T
Q  440 acatagttatccttttttatga 461  Q
    | ||||||||||||||||||||    
T  28458623 atatagttatccttttttatga 28458644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 9525800 - 9525930
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcc---tttatc-nnnnnnngtcacgatttagctctttatgttat 430  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||        ||||||||||||   ||||||||||    
T  9525800 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttttttatcttttttttgtcacgatttagtcatttatgttat 9525899  T
Q  431 aaaataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||| ||||||||||    
T  9525900 aaaataacaacatagttatcattttttatga 9525930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 456
Target Start/End: Complemental strand, 30055554 - 30055437
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |        || || ||||||  |||||||||||||||    
T  30055554 ttttaggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtccttttt----ttttgtaacaatttagtcctttatgttataaaa 30055459  T
Q  435 taacaacatagttatccttttt 456  Q
    ||||||||||||||||||||||    
T  30055458 taacaacatagttatccttttt 30055437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 3546838 - 3546712
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc---nnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||          ||||| ||||||  |||||||||||||||    
T  3546838 taggcaaaattacacaattagtttcttaactttattttaggtaacactttcgtcatttatcttttttttttgtcacaatttagtcctttatgttataaaa 3546739  T
Q  435 taacaacatagttatccttttttatga 461  Q
    |||||||||||||||| ||||||||||    
T  3546738 taacaacatagttatcattttttatga 3546712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 23163627 - 23163504
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||     
T  23163627 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatg 23163528  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||  ||||| ||||||||||    
T  23163527 acaatat-cttatcattttttatga 23163504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 26202517 - 26202643
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  26202517 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttcttgtcacgatttagtcctttatgttataaa 26202616  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  26202617 atgacaatat-cttatcattttttatga 26202643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 33692257 - 33692383
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  33692257 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 33692356  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  33692357 atgacaatat-cttatcattttttatga 33692383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 49621438 - 49621560
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| |    
T  49621438 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatga 49621537  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  49621538 caatat-cttatcattttttatga 49621560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 41689383 - 41689447
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41689383 atttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 41689447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 461
Target Start/End: Complemental strand, 50161460 - 50161341
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaa 440  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| ||||    
T  50161460 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaa 50161361  T
Q  441 catagttatccttttttatga 461  Q
     ||  ||||| ||||||||||    
T  50161360 tat-cttatcattttttatga 50161341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 342 - 461
Target Start/End: Original strand, 21707605 - 21707724
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaac 441  Q
    |||||||||| |||||||| ||||||||||||||| |||| | ||||||  ||||||       ||||||||||||   |||||||||||||||||||||    
T  21707605 caaaattacataattagtctcttaactttattttaagtaatattttcgttttttatctttttttgtcacgatttagtcatttatgttataaaataacaac 21707704  T
Q  442 atagttatccttttttatga 461  Q
    ||||||||||||||||||||    
T  21707705 atagttatccttttttatga 21707724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 28458872 - 28458746
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||  ||||||||||||||    
T  28458872 tttttggcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 28458773  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  28458772 atgacaatat-cttatcattttttatga 28458746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 37873109 - 37872986
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||| | |||||||||||||||||||||||| | |||||||||||||||||||        ||||||||||||   |||||||||||||||||    
T  37873109 aggcaaaattatataattagtcccttaactttattttatgcaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttataaaataa 37873010  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||| ||||||| ||||||||||    
T  37873009 caacaaagttatcattttttatga 37872986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 46143621 - 46143559
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46143621 ttttaggcaaaattacacaattagtgccttaactttattttaggtaacactttcgtcctttat 46143559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 33369507 - 33369564
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33369507 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 33369564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 55140193 - 55140318
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||||  |||||| ||||||||    
T  55140193 tttttggcaaaattacacgattaatcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttattttataaaa 55140292  T
Q  435 taacaacatagttatccttttttatga 461  Q
    | |||| ||  ||||| ||||||||||    
T  55140293 tgacaatat-cttatcattttttatga 55140318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 21053642 - 21053583
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21053642 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatc 21053583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 25297679 - 25297738
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25297679 aggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 25297738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 341 - 456
Target Start/End: Complemental strand, 30799668 - 30799548
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-----nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||            || |||||||||   |||||||||||||||    
T  30799668 gcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttttttgtaacgatttagtcttttatgttataaaat 30799569  T
Q  436 aacaacatagttatccttttt 456  Q
    |||||||||||||||||||||    
T  30799568 aacaacatagttatccttttt 30799548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 37872762 - 37872825
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37872762 tttttggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatc 37872825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 340 - 435
Target Start/End: Complemental strand, 42857147 - 42857051
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||    
T  42857147 ggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 42857051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 52690448 - 52690385
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52690448 tttttggcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatc 52690385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 461
Target Start/End: Original strand, 5260204 - 5260314
Alignment:
Q  350 cacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaacatagttat 449  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||  |||||||||||||||| |||| ||  ||||    
T  5260204 cacaattagtcccttaactttattttaggtaacattttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaatat-cttat 5260302  T
Q  450 ccttttttatga 461  Q
    | ||||||||||    
T  5260303 cattttttatga 5260314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 9526155 - 9526033
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||        ||||||||||||  |||||||||||||||| |    
T  9526155 aggcaaaataacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatgttataaaatga 9526056  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  9526055 caatat-cttatcattttttatga 9526033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 343 - 461
Target Start/End: Complemental strand, 41689734 - 41689615
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctttatgttataaaataacaac 441  Q
    |||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||        || || |||| |  ||||||||||||||||||||||    
T  41689734 aaaattacacaattagccccttaactttattttaagtaatattttcgtcctttatcttttttttgttacaattttgtcctttatgttataaaataacaac 41689635  T
Q  442 atagttatccttttttatga 461  Q
    ||||||||||||||||||||    
T  41689634 atagttatccttttttatga 41689615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 48419563 - 48419441
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||  |||||||||||||||| |    
T  48419563 aggcaaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatga 48419464  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  48419463 caatat-cttatcattttttatga 48419441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 5260538 - 5260416
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||        |||| ||||||    ||||||||||||||||||    
T  5260538 ggcaaaattacataattagtcttttaactttattttaggtaacattttcgtcctttatctttgttttgtcatgatttaatcatttatgttataaaataac 5260439  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||| ||||    
T  5260438 aacatagttatcctttttcatga 5260416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 25298023 - 25297909
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctttatgttataaaataacaac 441  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||         || ||||||||  |||||||||||||||||||||||    
T  25298023 aaaattacacaattagtcccttaacttaattttaagtaacattttcatcctttattttttttttgtaacgatttaattctttatgttataaaataacaac 25297924  T
Q  442 atagttatccttttt 456  Q
    |||||||||||||||    
T  25297923 atagttatccttttt 25297909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 3546483 - 3546610
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||         ||||||||||||  |||||||||||||    
T  3546483 ttttagacaaaattacataattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttggtcacgatttagtcctttatgttataa 3546582  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    ||| |||| ||  ||||| ||||||||||    
T  3546583 aatgacaatat-cttatcattttttatga 3546610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 30799286 - 30799350
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30799286 atttaaggtaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 30799350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 457
Target Start/End: Complemental strand, 55140541 - 55140425
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaa 440  Q
    ||||||||||||||||| ||| |||||||||||||| |||| |||||||||||||||        || ||| |||||  ||||||| |||||||||||||    
T  55140541 gcaaaattacacaattaatcctttaactttattttaagtaatactttcgtcctttatttatttttgttacggtttagtcctttatgctataaaataacaa 55140442  T
Q  441 catagttatcctttttt 457  Q
     ||||||||||||||||    
T  55140441 aatagttatcctttttt 55140425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 55742621 - 55742675
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctt 394  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55742621 ggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctt 55742675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 30055208 - 30055265
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  30055208 ggcaaaattacacaattagtcccttaacttaattttaggtaacacttttgtcctttat 30055265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 2685980 - 2686036
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtc 391  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2685980 tttttggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtc 2686036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 20931324 - 20931201
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||         ||||||||||||  ||||||||||||||||     
T  20931324 aggcaaaattacacgattagttccttaactttattttagataacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatg 20931225  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||  ||||| ||||||||||    
T  20931224 acaatat-cttatcattttttatga 20931201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 13294602 - 13294724
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||         ||||||||||||  |||||||||||||||| |    
T  13294602 ggcaaaatagcacaattagtcccttaactttattttatgtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatga 13294701  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  13294702 caatat-cttatcattttttatga 13294724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 21707948 - 21707890
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  21707948 ggcaaaattacacaattagtctcttaactttattttaggtaatactttcgttctttatc 21707890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 457
Target Start/End: Original strand, 23549473 - 23549577
Alignment:
Q  354 attagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaacatagttatcct 452  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||        || |||||||||  || ||||||||||||||||||| ||||||||||    
T  23549473 attagtcccttaactttattttaggtaatactttagtcttttatcttttttttgttacgatttagtcctctatgttataaaataacaacgtagttatcct 23549572  T
Q  453 ttttt 457  Q
    |||||    
T  23549573 ttttt 23549577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 32488583 - 32488642
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  32488583 aggcaaaattacacttttagtcccttaactttattttaggtaacaatttagtcctttatc 32488642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 23549848 - 23549788
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||| || |||||| ||||||||||||||||| ||| ||||||||||||||||    
T  23549848 taggcaaaattatacgattagttccttaactttattttagataatactttcgtcctttatc 23549788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 395
Target Start/End: Complemental strand, 23963167 - 23963107
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 395  Q
    |||||||| |||||||||  ||||||||||||||| ||||||||||||| |||||||||||    
T  23963167 ttttaggctaaattacacttttagtcccttaacttaattttaggtaacaatttcgtccttt 23963107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 10993620 - 10993683
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  10993620 ttttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 10993683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 461
Target Start/End: Original strand, 21053365 - 21053420
Alignment:
Q  406 gtcacgatttagctctttatgttataaaataacaacatagttatccttttttatga 461  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  21053365 gtcacgatttagtcctttatgttataaaataacaacacagttatcattttttatga 21053420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 398
Target Start/End: Original strand, 9902645 - 9902711
Alignment:
Q  332 agattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||| ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  9902645 agatttcaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 9902711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 423 - 461
Target Start/End: Original strand, 23549582 - 23549620
Alignment:
Q  423 tatgttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23549582 tatgttataaaataacaacatagttatccttttttatga 23549620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 32922383 - 32922323
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  32922383 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 32922323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 52654248 - 52654188
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  52654248 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52654188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 2686254 - 2686207
Alignment:
Q  409 acgatttagctctttatgttataaaataacaacatagttatccttttt 456  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||    
T  2686254 acgatttagtactttatgttataaaataacaacattgttatccttttt 2686207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 20983913 - 20983972
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  || |||||||||||||||||||||||| | ||| ||||||||||    
T  20983913 aggcaaaattacacttttggtcccttaactttattttaggtaataatttagtcctttatc 20983972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 20984229 - 20984170
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  20984229 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 20984170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 21360452 - 21360515
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||| || |||||||||||||| ||||||||||||  ||| ||||||||||    
T  21360452 tttttggcaaaattacataaatagtcccttaacttaattttaggtaacgttttagtcctttatc 21360515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 45656011 - 45655948
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||| ||||||||||||| ||| ||| ||||||    
T  45656011 tttttggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcatttatc 45655948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 39791913 - 39791975
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  ||||||| ||||||| |||| |||||||| ||| ||||||||||    
T  39791913 tttaggcaaaattacacttttagtcctttaacttaatttcaggtaacaatttggtcctttatc 39791975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 49387500 - 49387438
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||| ||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  49387500 tttaggcaaaattatacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 49387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 52538193 - 52538135
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  52538193 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 52653931 - 52653989
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  52653931 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52653989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 16019954 - 16020015
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| |||  |||||||||    
T  16019954 ttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatc 16020015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 16530315 - 16530376
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  16530315 ttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatc 16530376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 2686333 - 2686273
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| ||||| |||| || |||||    
T  2686333 ttaggcaaaattacacaattaatcctttaacttaattttagctaacattttcatcttttat 2686273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 22335434 - 22335493
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||| ||  ||||||||||| |||| |||||||||||||||| ||||||    
T  22335434 taggcaaaattacacagttc-tcccttaacttaatttcaggtaacactttcgtcttttatc 22335493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 41376582 - 41376642
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||| | ||| ||||||||||    
T  41376582 taggcaaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatc 41376642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 44551227 - 44551171
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  44551227 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 44551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 461
Target Start/End: Original strand, 48419298 - 48419338
Alignment:
Q  421 tttatgttataaaataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  48419298 tttatgttataaaataacaacatagatatcattttttatga 48419338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 53232444 - 53232388
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||| |||||||||||| ||||||  ||| ||||||||| |||||    
T  53232444 gcaaaattacacaatttgtcccttaacttaattttatataatactttcgtcatttat 53232388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 15516621 - 15516562
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||  || |||||||||||| |||| |||||||| ||| |||||||||    
T  15516621 taggcaaaattacactttttgtcccttaacttaatttcaggtaacaatttagtcctttat 15516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 21361499 - 21361440
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| ||||||| || |||||||||||||| |||||| |||||| ||| ||||||||||    
T  21361499 aggcataattacataaatagtcccttaacttaattttacgtaacattttagtcctttatc 21361440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 383
Target Start/End: Original strand, 37068685 - 37068728
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    |||||||||||||  ||||||||||||||| |||||||||||||    
T  37068685 ggcaaaattacacttttagtcccttaacttaattttaggtaaca 37068728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 52537882 - 52537937
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  52537882 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 52537937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 53232099 - 53232154
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||  || |||||||| ||||||||||| ||||||||| |||||    
T  53232099 caaaattacacaattcatctcttaacttaattttaggtaatactttcgtcttttat 53232154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 9902970 - 9902912
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  9902970 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 9902912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 25331814 - 25331872
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| |||  ||||||||    
T  25331814 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttgatcctttat 25331872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 457
Target Start/End: Complemental strand, 26202784 - 26202754
Alignment:
Q  427 ttataaaataacaacatagttatcctttttt 457  Q
    |||||||||||||||||||||||||||||||    
T  26202784 ttataaaataacaacatagttatcctttttt 26202754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 26886928 - 26886866
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||   ||||||||||||||| |||| | |||||| ||| ||||||||||    
T  26886928 tttaggcaaaattacatttttagtcccttaacttaatttcaagtaacagtttggtcctttatc 26886866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 32922067 - 32922125
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  32922067 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 32922125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 35130791 - 35130849
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  35130791 ggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 35130849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 43914443 - 43914497
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||| || |||||    
T  43914443 aaaattacacaatttgtcccttaacttaaatttagataacactttcatcgtttat 43914497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 46648065 - 46648127
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  |||  |||||||||| |||| |||||||| ||| ||||||||||    
T  46648065 tttaggcaaaattacacctttaaccccttaacttaatttcaggtaacaatttggtcctttatc 46648127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 457
Target Start/End: Original strand, 563574 - 563611
Alignment:
Q  420 ctttatgttataaaataacaacatagttatcctttttt 457  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  563574 ctttatgttataaaatgtcaacatagttatcctttttt 563611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 9644767 - 9644808
Alignment:
Q  355 ttagtcccttaactttattttaggtaacactttcgtccttta 396  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||    
T  9644767 ttagtcccttaacttaattttaggtaacaatttggtccttta 9644808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 258
Target Start/End: Original strand, 18982759 - 18982788
Alignment:
Q  229 gttttttcatgcttaagtgttaatgtcacg 258  Q
    ||||||||||||||||||||||||||||||    
T  18982759 gttttttcatgcttaagtgttaatgtcacg 18982788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 23572602 - 23572659
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||   ||||||||||||||||||||||||| ||| ||  ||||||||||    
T  23572602 gcaaaattacatttttagtcccttaactttattttaggttacagttgagtcctttatc 23572659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 35131109 - 35131052
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  35131109 gcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 35131052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 44550909 - 44550966
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||  ||||||||||||||| |||| | |||||| ||| |||||||||    
T  44550909 ggcaaaattacacttttagtcccttaacttaatttcatgtaacagtttggtcctttat 44550966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 563485 - 563549
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| ||| ||||||||||| ||| |||||||| ||||||  |||||||||| || ||||||    
T  563485 attttagacaagattacacaatttgtctcttaacttaattttatataacactttcatcatttatc 563549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 7067554 - 7067498
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| |||||||| |||  |||||||||    
T  7067554 caaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatc 7067498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 17040230 - 17040166
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||   | |||||||||||| |||| || ||||| ||| ||||||||||    
T  17040230 attttaggcaaaattacactcatggtcccttaacttaatttcagttaacaatttggtcctttatc 17040166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 41944216 - 41944168
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    |||||||||||||||||   ||||||||||||||| |||| ||||||||    
T  41944216 ttttaggcaaaattacatttttagtcccttaacttaatttcaggtaaca 41944168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 54036866 - 54036922
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| |||||| | ||| ||||||||||    
T  54036866 caaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatc 54036922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 2318841 - 2318714
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||   |||||||||||||    
T  2318841 atttaaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttcttttgtcacgatttagtcttttatgttataaa 2318742  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||| ||||    
T  2318741 ataacaacatagttatcctttttcatga 2318714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 27360472 - 27360345
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||  ||||||||||||||    
T  27360472 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 27360373  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||    
T  27360372 ataacaacatagttatccttttttatga 27360345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 17846359 - 17846231
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  || ||||||||||    
T  17846359 attttaggcaaaattatacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctatatgttataa 17846260  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||||    
T  17846259 aataacaacatagttatccttttttatga 17846231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 342 - 461
Target Start/End: Original strand, 9319804 - 9319924
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaa 440  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||||||||    
T  9319804 caaaactacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaa 9319903  T
Q  441 catagttatccttttttatga 461  Q
    |||||||||||||||||||||    
T  9319904 catagttatccttttttatga 9319924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 18916971 - 18916848
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||        ||||||||||||  ||||||||||||||||||    
T  18916971 aggcaaaattacataattagtcccttaactttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaataa 18916872  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  18916871 caacatagttatccttttttatga 18916848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 20363970 - 20364092
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||        ||||||||||||  |||||||||||||||||||    
T  20363970 ggcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataac 20364069  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||    
T  20364070 aacatagttatccttttttatga 20364092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 336 - 461
Target Start/End: Complemental strand, 601682 - 601553
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc----nnnnnnngtcacgatttagctctttatgttata 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||           ||||||||||||  |||||||||||     
T  601682 tttaggcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttattttttttgtcacgatttagtcctttatgttatg 601583  T
Q  432 aaataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||| ||||    
T  601582 aaataacaacatagttatcctttttaatga 601553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 4261503 - 4261376
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc----nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||           ||||||||||||  || |||||||||||    
T  4261503 taggcaaaattacacaattagtccgttaactttattttaggtaacactttcgtcctttatctttttttttttgtcacgatttagtcctctatgttataaa 4261404  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||| ||||||||||    
T  4261403 ataacaacatagttatcattttttatga 4261376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 10044732 - 10044803
Alignment:
Q  327 ttaatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10044732 ttaaaagatttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 10044803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 18916623 - 18916746
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||     
T  18916623 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatg 18916722  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||  ||||| ||||||||||    
T  18916723 acaatat-cttatcattttttatga 18916746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 461
Target Start/End: Complemental strand, 9320149 - 9320027
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| |    
T  9320149 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatga 9320050  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  9320049 caatat-cttatcattttttatga 9320027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 341 - 461
Target Start/End: Complemental strand, 10109160 - 10109038
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctt--tatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||||||||  |||        ||||||||||||  |||||||||||||||||||    
T  10109160 gcaaaattacgcacttagtcccttaactttattttagttaacactttcgtcctttatatttttttttgtcacgatttagtcctttatgttataaaataac 10109061  T
Q  439 aacatagttatccttttttatga 461  Q
    || ||||||||||||||||||||    
T  10109060 aatatagttatccttttttatga 10109038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 10108800 - 10108871
Alignment:
Q  327 ttaatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10108800 ttaaaagatttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatc 10108871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 44536536 - 44536409
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||        ||||||||||||  |||||||||||||    
T  44536536 attttaggtaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatgttataa 44536437  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    ||| |||| ||  ||||| ||||||||||    
T  44536436 aatgacaatat-cttatcattttttatga 44536409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 17846007 - 17846129
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||  |||||||||||||||| |    
T  17846007 aggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatga 17846106  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  17846107 caatat-cttatcattttttatga 17846129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 2318493 - 2318613
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| |||    
T  2318493 ggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatttttttttgtcacgatttagtcctttatgttataaaatgaca 2318592  T
Q  440 acatagttatccttttttatga 461  Q
    | ||  ||||| ||||||||||    
T  2318593 atat-cttatcattttttatga 2318613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 4261147 - 4261211
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4261147 attttaggtaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatc 4261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 461
Target Start/End: Original strand, 44536175 - 44536306
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagct----ctttatgtta 429  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||         |||| ||||||  |    ||||||||||    
T  44536175 tttaggcaatattgcacaattagtcctttaactttattttaggtaacacttccgtcctttatctttttttttgtcatgatttaattaatactttatgtta 44536274  T
Q  430 taaaataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||||||    
T  44536275 taaaataacaacatagttatccttttttatga 44536306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 20364316 - 20364259
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20364316 ggcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttat 20364259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 27360117 - 27360176
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  27360117 taggcaaaattacacaattagtcccttaactttattttaggtaatattttcgtcctttat 27360176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 5547393 - 5547339
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5547393 aaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 5547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 10045092 - 10044969
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta---tcnnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||   ||        ||||||||||   |||||||||||||||||    
T  10045092 ggcaaaattacgcaattagtcccttaacttt-ttttagttaacactttcgtcctttatcttctttttttttcacgatttattcctttatgttataaaata 10044994  T
Q  437 acaacatagttatccttttttatga 461  Q
    | |||||||||||| ||||||||||    
T  10044993 ataacatagttatctttttttatga 10044969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 18178440 - 18178377
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  18178440 atttttggcaaaattacacaattagtcctttaactttatattaggtaatactttcgtcctttat 18178377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 30337424 - 30337482
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  30337424 ggcaaaattacacaattagtccattaacttaattttaggtaacattttcgtcctttatc 30337482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 30337777 - 30337648
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc------nnnnnnngtcacgatttagctctttatgttat 430  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||||| | ||||||||||||             || |||||||||  |||||||||||    
T  30337777 ttaggcaaaattacagaattagtcccttaacttaattttagataacattatcgtcctttatctttttttttttttgtaacgatttagtcctttatgttat 30337678  T
Q  431 aaaataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||| |||||||||||    
T  30337677 aaaataacaacatagttat-cttttttatga 30337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 8322530 - 8322429
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||        |||||||||||  |||||||||||||||| |    
T  8322530 taggcaaaattacagaattcgtcccttaacttaattttaggtaacattttcgtcctttatcttttttt-tcacgatttagtcctttatgttataaaatga 8322432  T
Q  438 caa 440  Q
    |||    
T  8322431 caa 8322429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 601327 - 601386
Alignment:
Q  340 ggcaaaattacacaattagtccctt-aactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  601327 ggcaaaattacacaattaatctctttaactttattttaggtaacactttcgtcctttatc 601386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 40710310 - 40710374
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||| | |||| |||||||||    
T  40710310 attttaggcaaaattacacaattcgtcccttaacttaatttcaggtaatattttcatcctttatc 40710374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 8236693 - 8236809
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaaca 442  Q
    ||||||||| |||| |||| ||||||| |||||| ||||||||||||| |||||||       ||| ||||| ||  | ||||||||||||||  |||||    
T  8236693 aaaattacaaaattcgtccattaacttaattttaagtaacactttcgttctttatctttttttgtcccgattaagtccattatgttataaaatgtcaaca 8236792  T
Q  443 tagttatccttttttat 459  Q
    |||||||| ||||||||    
T  8236793 tagttatctttttttat 8236809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 8322242 - 8322362
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||| || |||  ||||||| |||||| |||||||||||||| ||||||        ||| ||||||||   |||||||||||||||     
T  8322242 taggcaaaattacacatttcgtcatttaacttaattttatgtaacactttcgtcttttatcttttttttgtcccgatttagtcatttatgttataaaatg 8322341  T
Q  437 acaacatagttatcctttttt 457  Q
    |||||||| ||||||||||||    
T  8322342 acaacataattatcctttttt 8322362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 10714008 - 10714066
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  || |||||||||||||||||||||||||| ||| ||||||||||    
T  10714008 ggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatc 10714066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 13862491 - 13862593
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    |||| |||||||||||||| |||| ||||||| |||||| |||| ||||||||||||||||       ||| ||| ||||  |||||||||||||||| |    
T  13862491 taggtaaaattacacaattcgtcctttaacttaattttaagtaatactttcgtcctttatctttttttgtctcgaattagtcctttatgttataaaatga 13862590  T
Q  438 caa 440  Q
    |||    
T  13862591 caa 13862593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 33274710 - 33274653
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||  ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  33274710 gcaaaattacacttttagtcccttaacttaattttaggtaacaatttggtcctttatc 33274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 9911903 - 9911967
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||| ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  9911903 attttaggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 9911967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 11723703 - 11723763
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   |||||||||||||||||||| |||||||| ||| ||||||||||    
T  11723703 taggcaaaattacatttttagtcccttaactttatttcaggtaacagtttggtcctttatc 11723763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 26499419 - 26499479
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| ||| |||||||||    
T  26499419 ttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 26499479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 30488396 - 30488336
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  30488396 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 30488336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 341307 - 341370
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  341307 ttttaggcaaaattacagttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 981779 - 981822
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaa 381  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  981779 taggcaaaattacacaatttgtcccttaacttaattttaggtaa 981822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 1650818 - 1650759
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  1650818 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagttttgtcctttatc 1650759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 421 - 456
Target Start/End: Original strand, 5547162 - 5547197
Alignment:
Q  421 tttatgttataaaataacaacatagttatccttttt 456  Q
    ||||||||||||||||||||||||||||||||||||    
T  5547162 tttatgttataaaataacaacatagttatccttttt 5547197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 29154059 - 29154122
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||  ||||||||||||||| |||| || ||||| ||| ||||||||||    
T  29154059 ttttaggcaaaattacacttttagtcccttaacttaatttcagttaacaatttggtcctttatc 29154122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 31769780 - 31769839
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||| ||||| |||||||||    
T  31769780 taggcaaaattacgcaattcgtctcttaacttaattttaggtaatactttagtcctttat 31769839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 5547103 - 5547145
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  5547103 gcaaaattacacaattagtcccttaacttaattttagataaca 5547145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 20663976 - 20663914
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| |||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  20663976 tttagccaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 20663914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 26499725 - 26499667
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  26499725 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 26499667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 28789185 - 28789123
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  28789185 tttaagcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 28789123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 35412191 - 35412133
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  35412191 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 35412133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 341628 - 341568
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   ||| ||||||||||| ||||||||||||| ||| ||||||||||    
T  341628 taggcaaaattacagttttaatcccttaacttaattttaggtaacagtttggtcctttatc 341568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 10192083 - 10192139
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 395  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| |||||||    
T  10192083 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtccttt 10192139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 394
Target Start/End: Original strand, 18449354 - 18449410
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctt 394  Q
    |||||||||||||||| |||||||||||| || |||| |||||||| ||| ||||||    
T  18449354 taggcaaaattacacatttagtcccttaatttaatttcaggtaacagtttggtcctt 18449410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 9027340 - 9027281
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  9027340 aggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttagtcctttatc 9027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 10714323 - 10714264
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  10714323 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 10714264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 13421392 - 13421333
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| ||||||  ||||||||||||||| ||||||||||||| |||  |||||||||    
T  13421392 aggcaaagttacacttttagtcccttaacttaattttaggtaacagtttgttcctttatc 13421333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 21251784 - 21251839
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||| |||| | ||||| |||| |||||||||||||||| |||||    
T  21251784 caaaattacacaatttgtccatgaacttaatttcaggtaacactttcgtcatttat 21251839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Original strand, 43055831 - 43055866
Alignment:
Q  421 tttatgttataaaataacaacatagttatccttttt 456  Q
    |||||||||||||||| |||||||||||||||||||    
T  43055831 tttatgttataaaatatcaacatagttatccttttt 43055866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 44490619 - 44490560
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||| | |||| |||||||| ||| ||||||||||    
T  44490619 aggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatc 44490560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 23926391 - 23926449
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||| ||||||||| |||| |||||||| ||||||| ||||||    
T  23926391 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttcgtcatttatc 23926449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 44490304 - 44490362
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||| ||||||||| |||| |||||||| ||| ||||||||||    
T  44490304 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttagtcctttatc 44490362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 2450109 - 2450146
Alignment:
Q  361 ccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  2450109 ccttaactttattttaggtaacagtttagtcctttatc 2450146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 3889197 - 3889128
Alignment:
Q  328 taatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||  ||||| ||||||||||  ||||||||||||||| |||| |||||||| |||  ||||||||    
T  3889197 taatagaaattaggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 3889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 15461568 - 15461511
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  15461568 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcatttatc 15461511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 29154376 - 29154319
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||   ||||||||||||||| ||||||||||||| ||| ||| ||||||    
T  29154376 gcaaaattacaattttagtcccttaacttaattttaggtaacagtttggtcttttatc 29154319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 1650506 - 1650561
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||   |||||||||||||| |||| |||||||| ||| ||||||||||    
T  1650506 ggcaaaattacac---tagtcccttaacttaatttcaggtaacagtttggtcctttatc 1650561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 383
Target Start/End: Complemental strand, 9912228 - 9912184
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    ||||||||||||||  ||| ||||||||||| |||||||||||||    
T  9912228 aggcaaaattacacttttaatcccttaacttaattttaggtaaca 9912184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 12937704 - 12937640
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||  ||| ||||||||||| |||| || ||| | ||| ||||||||||    
T  12937704 attttaggcaaaattacacttttaatcccttaacttaatttcagataatagtttagtcctttatc 12937640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 21251025 - 21251069
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    ||||||||||||| || || ||||||||||| |||||||||||||    
T  21251025 aggcaaaattacataaatattcccttaacttaattttaggtaaca 21251069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 31557068 - 31557004
Alignment:
Q  335 ttttaggcaaaattacacaatt-agtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||  || ||||||||||||| |||| |||||||| ||| ||| ||||||    
T  31557068 ttttaggcaaaattacactttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 31557004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 6e-41; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 35362984 - 35363106
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat-cnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||  |||||||||||||||||||    
T  35362984 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcctttttttgtcacgatttagtcctttatgttataaaataac 35363083  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||    
T  35363084 aacatagttatccttttttatga 35363106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 32936205 - 32936328
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||||    
T  32936205 aggcaaaattacacaattagtcacttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataa 32936304  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||    
T  32936305 caacatagttatccttttttatga 32936328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 40834286 - 40834159
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||  ||||||||||||||    
T  40834286 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttctttgtcacaatttagtcctttatgttataaa 40834187  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    |||||||||||||| |||||||||||||    
T  40834186 ataacaacatagttgtccttttttatga 40834159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 18485659 - 18485781
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||  |||||||||||||||||||    
T  18485659 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttgttgtcacaatttagtcctttatgttataaaataac 18485758  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||| ||||    
T  18485759 aacatagttatcctttttcatga 18485781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 13600442 - 13600568
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc---nnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||          ||||||||||||  |||||||||||||||    
T  13600442 taggcaaaattacacaattagtcctttacctttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataaaa 13600541  T
Q  435 taacaacatagttatccttttttatga 461  Q
    |||||||||||||||| ||||||||||    
T  13600542 taacaacatagttatcattttttatga 13600568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 2094574 - 2094697
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||        ||||||||||||  ||||||||||||||||||    
T  2094574 aggcaaaattacacaattaatcccttaactttattttaggtaacactttggtcctttatcttttttttgtcacgatttagtcctttatgttataaaataa 2094673  T
Q  438 caacatagttatccttttttatga 461  Q
    ||||| ||||||| ||||||||||    
T  2094674 caacaaagttatcattttttatga 2094697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 7145884 - 7145762
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||        ||||||||||||  |||||||||||||||||||    
T  7145884 ggcaaaattacataattaatcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataac 7145785  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||| ||||||||||    
T  7145784 aacatagttatcattttttatga 7145762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 461
Target Start/End: Complemental strand, 20770056 - 20769935
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||         ||||||||||||  ||||||||||||||||||||    
T  20770056 caaaattacacaattagtcccttaacattattttaggtaacacttccgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataaca 20769957  T
Q  440 acatagttatccttttttatga 461  Q
    | ||||||||||||||||||||    
T  20769956 atatagttatccttttttatga 20769935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 30370511 - 30370632
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||   ||||||||||||||||||    
T  30370511 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcatttatgttataaaataac 30370610  T
Q  439 aacatagttatccttttttatga 461  Q
    ||||||||||| |||||||||||    
T  30370611 aacatagttat-cttttttatga 30370632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 30370856 - 30370736
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||||||||||  |||||||||||||||| |||    
T  30370856 ggcaaaattacacaattagtcccttaactttattttaggcaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgaca 30370757  T
Q  440 acatagttatccttttttatga 461  Q
    | ||  ||||| ||||||||||    
T  30370756 atat-cttatcattttttatga 30370736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 35363341 - 35363277
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35363341 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 35363277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 40833935 - 40834057
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| |    
T  40833935 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatga 40834034  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  40834035 caatat-cttatcattttttatga 40834057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 32936551 - 32936430
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| ||    
T  32936551 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgac 32936452  T
Q  439 aacatagttatccttttttatga 461  Q
    || ||  ||||| ||||||||||    
T  32936451 aatat-cttatcattttttatga 32936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 3539600 - 3539720
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaataacaa 440  Q
    ||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||         ||||| ||||||  |||||||||||||||||||||    
T  3539600 aaaattatacaattaatcccttaactttattttaggtaacattttcgtcctttatctttttttttgtcacaatttagtcctttatgttataaaataacaa 3539699  T
Q  441 catagttatccttttttatga 461  Q
    ||||||||||||| |||||||    
T  3539700 catagttatccttctttatga 3539720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 7145528 - 7145591
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7145528 ttttaggcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 7145591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 20769707 - 20769833
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||  ||||||||||||||    
T  20769707 tttttggcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 20769806  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  20769807 atgacaatat-cttatcattttttatga 20769833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 456
Target Start/End: Complemental strand, 25363363 - 25363244
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||| |||||| || ||||||| ||||| ||||||||||||||        || |||||||||  |||||||||||||||||    
T  25363363 taggcaaaattacacaattagttccttaatttaattttagataacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaata 25363264  T
Q  437 acaacatagttatccttttt 456  Q
    ||||||||||||||||||||    
T  25363263 acaacatagttatccttttt 25363244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 20339153 - 20339214
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20339153 ttaggcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatc 20339214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 2094924 - 2094860
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2094924 atttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatc 2094860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 15179137 - 15179077
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15179137 taggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 15179077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 32994502 - 32994442
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32994502 taggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 32994442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 336 - 435
Target Start/End: Complemental strand, 13600795 - 13600695
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||        ||||||||||||  |||||||||||||||    
T  13600795 tttaggcaaaattacacaattagtctcttaactttattgtaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaa 13600696  T
Q  435 t 435  Q
    |    
T  13600695 t 13600695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 3539947 - 3539821
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  3539947 attttaggcaaaattatacaattagtctcataattttattttaggtaacactttcgtcctttatttttttttgtcacgatttagtcctttatgttataaa 3539848  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  3539847 atgacaatat-cttatcattttttatga 3539821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 19558218 - 19558160
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19558218 ggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 19558160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 391
Target Start/End: Complemental strand, 37093791 - 37093738
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37093791 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtc 37093738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 18486007 - 18485947
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18486007 taggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatc 18485947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 35361922 - 35362035
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaaca 442  Q
    ||||||||||||||||| ||||||||| | ||||||||||| ||||||| ||| |        || |||||||||  |||||||||||||||||||||||    
T  35361922 aaaattacacaattagttccttaacttaaatttaggtaacattttcgtcattttttttttgttgtaacgatttagtcctttatgttataaaataacaaca 35362021  T
Q  443 tagttatccttttt 456  Q
    ||||||||||||||    
T  35362022 tagttatccttttt 35362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 35362264 - 35362205
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  35362264 aggcaaaattacacaattagtcccttaacttaattttaggtaacgctttcgtcctttatc 35362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 132048 - 132165
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc----nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    ||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||            | |||||||||  |||||||||||||||||||    
T  132048 aaaattacacaattaatcccttaatttaattttaggtaacattttcgtcctttatctttttttttttttaacgatttagtcctttatgttataaaataac 132147  T
Q  439 aacatagttatccttttt 456  Q
    ||||||||||||||||||    
T  132148 aacatagttatccttttt 132165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 456
Target Start/End: Original strand, 15178783 - 15178906
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctttatgttataa 432  Q
    ||||| ||||||||||| | |||||||| ||||||| ||||||| ||| | ||||||||||||||        || |||||||||   ||||||||||||    
T  15178783 atttttggcaaaattacgcgattagtcctttaacttaattttagataatattttcgtcctttatcttttttttgtaacgatttagtcttttatgttataa 15178882  T
Q  433 aataacaacatagttatccttttt 456  Q
    ||||||||||||||||||||||||    
T  15178883 aataacaacatagttatccttttt 15178906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 435
Target Start/End: Original strand, 25363016 - 25363111
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||       || |||||||||  ||||||||||||||||    
T  25363016 ggcaaaattacacaaacagtcccttaacttaattttaggtaacactttcgtcatttatctttttttgtaacgatttagtcctttatgttataaaat 25363111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 27843023 - 27843081
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  27843023 ggcaaaattacataattagtcccttaacttaattttaggtaacattttcgtcctttatc 27843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 32458133 - 32458075
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  32458133 aggcaaaattacacaattagtcccttaacttaattttaggtaacattttcatcctttat 32458075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 456
Target Start/End: Original strand, 32994164 - 32994276
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaac 441  Q
    |||||||||||||||||||  ||||||| ||||||  ||||| |||||||||||||        || |||||||||   |||||||||||||||||||||    
T  32994164 caaaattacacaattagtcgtttaacttaattttaaataacattttcgtcctttat--ttttttgtaacgatttagtcttttatgttataaaataacaac 32994261  T
Q  442 atagttatccttttt 456  Q
    |||||||||||||||    
T  32994262 atagttatccttttt 32994276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 132396 - 132336
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| ||||||||||  |||||||||  ||||||||||||||||||||||||||    
T  132396 tttaggcaaaattgcacaattagttacttaacttt--tttaggtaacactttcgtcctttatc 132336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 1643535 - 1643597
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  1643535 tttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 1643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 40952065 - 40952125
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  40952065 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 40952125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 2467058 - 2467117
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||   ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  2467058 aggcaaaattacatttttagtcccttaacttaattttaggtaacagtttggtcctttatc 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 16736800 - 16736859
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  16736800 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 16736859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 19130865 - 19130928
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||| ||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  19130865 ttttaggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 19130928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 24858398 - 24858461
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||||||||   ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  24858398 tttttggcaaaattacatttttagtcccttaacttaattttaggtaacagtttggtcctttatc 24858461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 33429852 - 33429789
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  33429852 tttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 33429789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 2426229 - 2426287
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  2426229 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatc 2426287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 14871734 - 14871792
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  14871734 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 14871792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 19131184 - 19131126
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  19131184 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 19131126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 39589615 - 39589673
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  39589615 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 39589673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 3294640 - 3294584
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||| ||||  ||||||||||| |||||| |||||||||| |||||||||    
T  3294640 gcaaaattacaaaatttatcccttaacttaattttaagtaacacttttgtcctttat 3294584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 14729450 - 14729506
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||| ||||||||||||||||||||| ||| ||| ||||||    
T  14729450 caaaattacacttttagtcctttaactttattttaggtaacagtttagtcttttatc 14729506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 1098890 - 1098949
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||  |||||||||||| || |||| |||||||| ||| |||||||||    
T  1098890 taggcaaaattacacttttagtcccttaatttaatttcaggtaacagtttagtcctttat 1098949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 3279503 - 3279444
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||||| |||||| ||| ||| ||||||    
T  3279503 aggcaaaattacacttttagtcccttaacttaattttaagtaacagtttggtcatttatc 3279444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 6541524 - 6541465
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||| ||||||| ||||||||||||| |||  |||||||||    
T  6541524 aggcaaaattacacttttagtcctttaacttaattttaggtaacagtttgatcctttatc 6541465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 7610582 - 7610519
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||| |||||||||||  |||||| |||||||| |||| |||||||| ||| |||||||||    
T  7610582 attttagacaaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttat 7610519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 12875662 - 12875720
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||   ||||||||||||||| ||||||||||||| ||| |||||||||    
T  12875662 taggcaaaattacatgtttagtcccttaacttaattttaggtaacagttt-gtcctttat 12875720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 394
Target Start/End: Complemental strand, 29171611 - 29171556
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctt 394  Q
    ||||||||||||||||||  || |||||||| |||| | |||||||||||||||||    
T  29171611 aggcaaaattacacaatttatctcttaacttaatttcacgtaacactttcgtcctt 29171556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 31485956 - 31486015
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  |||||| |||||||| |||| |||||||| ||| ||||||||||    
T  31485956 aggcaaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatc 31486015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 32771990 - 32772049
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||| ||||||| |||| |||||||| ||| ||||||||||    
T  32771990 aggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatc 32772049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 7601907 - 7601849
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  7601907 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 7601849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 7610259 - 7610321
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||| ||||||||||  ||||||||||||||| |||| |||||| | ||| ||||||||||    
T  7610259 tttaggtaaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatc 7610321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 461
Target Start/End: Original strand, 7846485 - 7846527
Alignment:
Q  419 tctttatgttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||  |||||| |||||||||||||||||    
T  7846485 tctttatgttataaaatgtcaacattgttatccttttttatga 7846527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 21258336 - 21258386
Alignment:
Q  348 tacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||| |||||||||||| || |||| |||||||||| |||||||||    
T  21258336 tacacaattcgtcccttaacttaatattagataacactttcatcctttatc 21258386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 22621361 - 22621303
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| ||||||||||| | ||| || |||||||    
T  22621361 ggcaaaattacacttttagtcccttaacttaattttaggtaatagtttagttctttatc 22621303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 30129789 - 30129731
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| ||||  ||||||| ||| ||||||||||    
T  30129789 ggcaaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatc 30129731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 37092183 - 37092237
Alignment:
Q  344 aaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||  |||| |||||||||||||||||||||||| ||| ||| ||||||    
T  37092183 aaattacacttttagccccttaactttattttaggtaacagtttagtcatttatc 37092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 13455988 - 13455931
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||   ||||||||||||||| ||||||||||||| |||  ||||||||    
T  13455988 ggcaaaattacatttttagtcccttaacttaattttaggtaacagtttgatcctttat 13455931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 6539991 - 6540050
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| | |||||| ||| ||||||||||    
T  6539991 taggcaaaattacacttttagtcccttaacttaatttca-gtaacagtttggtcctttatc 6540050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 7601587 - 7601651
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| |||||||||| |   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  7601587 atttttggcaaaattatatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 7601651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 16749709 - 16749618
Alignment:
Q  242 taagtgttaatgtcacgatgattgaattaacacgtagtgaaatgaggtagcaccttaaatctataaagtgaaattattcttgaacttaataga 334  Q
    ||||| |||||||||  | ||||||||||||||| |||||||||||  | |||| ||  | ||||||||| ||||  ||||||||||||||||    
T  16749709 taagtattaatgtcataaggattgaattaacacgcagtgaaatgagacaacaccatatgtttataaagtg-aatttctcttgaacttaataga 16749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 17244766 - 17244706
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||||| ||||  || ||||| || |||||||||||||||||||| |||||||    
T  17244766 taggaaaaattacataattgatctcttaatttaattttaggtaacactttcgtactttatc 17244706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 6e-41; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 336 - 461
Target Start/End: Original strand, 17611421 - 17611547
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        ||||||||||||  |||||||||||||||    
T  17611421 tttaggcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttttctgtcacgatttagtcctttatgttataaaa 17611520  T
Q  435 taacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||    
T  17611521 taacaacatagttatccttttttatga 17611547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 334 - 456
Target Start/End: Original strand, 40902321 - 40902444
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataa 432  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||    
T  40902321 atttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttgttgtcacgatttagtcctttatgttataa 40902420  T
Q  433 aataacaacatagttatccttttt 456  Q
    ||||||||||||||||||||||||    
T  40902421 aataacaacatagttatccttttt 40902444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 2027070 - 2026943
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        ||||| ||||||  ||||||||||||||    
T  2027070 tttttggcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttctttgtcacaatttagtcctttatgttataaa 2026971  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||    
T  2026970 ataacaacatagttatccttttttatga 2026943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 12139370 - 12139247
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||  || |||||||||||||||    
T  12139370 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctctatgttataaaataa 12139271  T
Q  438 caacatagttatccttttttatga 461  Q
    || |||||||||||||||||||||    
T  12139270 catcatagttatccttttttatga 12139247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 17985290 - 17985409
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaac 441  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||||||||    
T  17985290 aaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaac 17985389  T
Q  442 atagttatccttttttatga 461  Q
    ||||||||||||||| ||||    
T  17985390 atagttatcctttttcatga 17985409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 30002214 - 30002333
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaac 441  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||        ||||||||||||  ||||||||||||||||||||||    
T  30002214 aaaattacacaattagtcccttaactttattttatgtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaac 30002313  T
Q  442 atagttatccttttttatga 461  Q
    ||||||||||||||||||||    
T  30002314 atagttatccttttttatga 30002333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 30563131 - 30563006
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||         ||||||||||||  ||||||||||||||||    
T  30563131 taggcaaaattacacgattagtcccttaactttattttaggtaacactttcgttctttatctttttttttgtcacgatttagtcctttatgttataaaat 30563032  T
Q  436 aacaacatagttatccttttttatga 461  Q
    |||||||||||| |||||||||||||    
T  30563031 aacaacatagttttccttttttatga 30563006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 7113863 - 7113987
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta-tcnnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        ||||||||||||  |||||| |||||||| |    
T  7113863 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatattataaaaca 7113962  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||||||||||||||||||| ||||    
T  7113963 acaacatagttatcctttttaatga 7113987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 337 - 456
Target Start/End: Complemental strand, 12115300 - 12115180
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||        || |||||||||  ||||||||||||||||    
T  12115300 ttaggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaat 12115201  T
Q  436 aacaacatagttatccttttt 456  Q
    |||||||||||||||||||||    
T  12115200 aacaacatagttatccttttt 12115180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 342 - 461
Target Start/End: Original strand, 25779887 - 25780011
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-----nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||            |||||||||||| ||||||||||||||||||    
T  25779887 caaaattacacaattagtcccttaactttattttagataacactttcgtcctttatcttttttttttttgtcacgatttagttctttatgttataaaata 25779986  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||||||||||||| ||||||||||    
T  25779987 acaacatagttatcattttttatga 25780011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 334 - 461
Target Start/End: Original strand, 30562778 - 30562904
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| | |||||||||||||||    
T  30562778 attttaggcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttggttctttatgttataaa 30562877  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  30562878 atgacaatat-cttatcattttttatga 30562904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 1549322 - 1549448
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  1549322 ttttaggcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 1549421  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    || |||| ||  ||||| ||||||||||    
T  1549422 atgacaatat-cttatcattttttatga 1549448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 2026720 - 2026842
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| |    
T  2026720 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatga 2026819  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  2026820 caatat-cttatcattttttatga 2026842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 334 - 435
Target Start/End: Complemental strand, 17611776 - 17611674
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||    
T  17611776 attttaggcaaaattacataattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataa 17611677  T
Q  433 aat 435  Q
    |||    
T  17611676 aat 17611674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 335 - 456
Target Start/End: Original strand, 19897171 - 19897293
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||        || |||||||||  |||||||||| |||    
T  19897171 tttttggcaaaattatacaattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttaaaaa 19897270  T
Q  434 ataacaacatagttatccttttt 456  Q
    |||||||||||||||||||||||    
T  19897271 ataacaacatagttatccttttt 19897293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 25780240 - 25780177
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25780240 attttaggtaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 25780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 342 - 461
Target Start/End: Complemental strand, 30002552 - 30002434
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataacaac 441  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||  |||||||||||||||| ||||     
T  30002552 caaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaat 30002453  T
Q  442 atagttatccttttttatga 461  Q
    ||  ||||| ||||||||||    
T  30002452 at-cttatcattttttatga 30002434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 339 - 456
Target Start/End: Complemental strand, 4969711 - 4969593
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctttatgttataaaataa 437  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||| ||| ||||||||||        || |||||||||  ||||||||||||||||||    
T  4969711 aggcaaaattacacaattagtcacttaacttaattttagataacatttttgtcctttatcttttttttgtaacgatttagtcctttatgttataaaataa 4969612  T
Q  438 caacatagttatccttttt 456  Q
    |||||||||||||||||||    
T  4969611 caacatagttatccttttt 4969593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 456
Target Start/End: Complemental strand, 40290133 - 40290008
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc---nnnnnnngtcacgatttagctctttatgttat 430  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||          || |||||||||   ||||||||||    
T  40290133 atttaaggcaaaattacataattagtcccttaacttaattttaggtaacattttcgtccttaatcttttttttttgtaacgatttagtcttttatgttat 40290034  T
Q  431 aaaataacaacatagttatccttttt 456  Q
    ||||||||||||||||||||||||||    
T  40290033 aaaataacaacatagttatccttttt 40290008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 7114208 - 7114088
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||        ||||| ||||||  |||||||||||||||| |||    
T  7114208 ggcaaaattacacaattagtccattaactttattttagataacactttcgtcctttatttttttttgtcacaatttagtcctttatgttataaaatgaca 7114109  T
Q  440 acatagttatccttttttatga 461  Q
    | ||  ||||| ||||||||||    
T  7114108 atat-cttatcattttttatga 7114088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 17985638 - 17985575
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17985638 ttttaggcaaaatagcacaattagtcccttaactttattttaggtaacattttcgtcctttatc 17985575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 398
Target Start/End: Complemental strand, 40902663 - 40902615
Alignment:
Q  350 cacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40902663 cacaattagtcccttaactttattttaggtaacacttttgtcctttatc 40902615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 12139018 - 12139081
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||    
T  12139018 atttaaggcaaaattacacaattagtctcttaattttattttaggtaatactttcgttctttat 12139081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 19897525 - 19897466
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||    
T  19897525 aggcaaaattacataattagccccttaacttaatcttaggtaacactttcgtcctttatc 19897466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 12114954 - 12115010
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  12114954 caaaattacataattagtcccttaacttaattttaggtaacattttcatcctttatc 12115010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 35521523 - 35521463
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  35521523 taggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 35521463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 5586486 - 5586545
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  || |||||||||||||||||||||||||| ||| ||||||||||    
T  5586486 aggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatc 5586545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 26874538 - 26874483
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||    
T  26874538 aaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatc 26874483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 34480503 - 34480440
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  |||||||||||||||||||||| |||||| ||| ||||||||||    
T  34480503 tttttggcaaaattacacttttagtcccttaactttattttaagtaacaatttagtcctttatc 34480440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 4969364 - 4969422
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||| | || |||||| ||||||| ||||||||||||||||||||||||||||    
T  4969364 ggcaaaattatataaatagtcctttaacttaattttaggtaacactttcgtcctttatc 4969422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 49564185 - 49564243
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||| ||| |||||||| |||| |||||||||||| ||||||||||    
T  49564185 ggcaaaattacacaattcgtctcttaacttaatttcaggtaacacttttgtcctttatc 49564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 25267502 - 25267441
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||| |||| |||| |||||||| ||||||| |||||||||| ||||||||    
T  25267502 tttaggcaaaattacgcaatcagtctcttaacttaattttagataacactttcatcctttat 25267441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 5618069 - 5618129
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  5618069 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 5618129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 6489188 - 6489128
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   ||||||||||||||||||||||||||||| ||| ||| ||||||    
T  6489188 taggcaaaattacaattttagtcccttaactttattttaggtaacagtttagtcatttatc 6489128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 8853412 - 8853352
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| ||| |||||||||    
T  8853412 ttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 8853352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 12649916 - 12649980
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| |||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  12649916 attttagacaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 12649980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 34480182 - 34480242
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  34480182 taggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 34480242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 49564655 - 49564599
Alignment:
Q  340 ggcaaaattacacaattagtccctt-aactttattttaggtaacactttcgtccttt 395  Q
    ||||||||||||||||| |||| || ||||| |||||||||||||||||||||||||    
T  49564655 ggcaaaattacacaatttgtccttttaacttaattttaggtaacactttcgtccttt 49564599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 7349765 - 7349828
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||| |||| || ||||||||| ||||||||||    
T  7349765 tttttggcaaaattacacttttagtcccttaacttaatttcagataacactttggtcctttatc 7349828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 29233686 - 29233745
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||| ||| ||||||||||||||| |||||||| ||||||||||||    
T  29233686 aggcaaaattatccaattggtctcttaactttattttaagtaacactctcgtcctttatc 29233745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 39672831 - 39672894
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  39672831 tttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatc 39672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 45315555 - 45315512
Alignment:
Q  355 ttagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  45315555 ttagtcccttaactttattttaggtaacaatttagtcctttatc 45315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 730795 - 730857
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||||||  || ||||||||||    
T  730795 tttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaacttagtcctttatc 730857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 4695250 - 4695192
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  4695250 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 4695192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 25267181 - 25267239
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||| | ||||| |||||||| || ||||||| ||||||||||||||||||||    
T  25267181 ggcaaaattatataattaatcccttaatttaattttagataacactttcgtcctttatc 25267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 26095484 - 26095546
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||| ||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  26095484 tttaggcaaaattatacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 26095546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 28554190 - 28554248
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  28554190 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 28554248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 31289254 - 31289312
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  31289254 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 31289312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 6488868 - 6488929
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  6488868 ttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 6488929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 29716471 - 29716410
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  29716471 ttaggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 29716410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 5618391 - 5618327
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| |||||| ||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  5618391 atttttggcaaagttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 5618327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 9172902 - 9172846
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||||  |||||||||    
T  9172902 caaaattacacaattcatcctttaacttaattttaggtaacactttaatcctttatc 9172846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 9180884 - 9180828
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||||  |||||||||    
T  9180884 caaaattacacaattcatcctttaacttaattttaggtaacactttaatcctttatc 9180828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 17504359 - 17504299
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  17504359 taggcaaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 17504299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 27067246 - 27067190
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 395  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||| ||| |||||||    
T  27067246 aggcaaaattatacttttagtcccttaacttaattttaggtaacagtttggtccttt 27067190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 39673148 - 39673092
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| ||||||| ||||| ||| ||||||||||    
T  39673148 caaaattacacttttagtcccttaacttaattttagataacagtttggtcctttatc 39673092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 40934738 - 40934674
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| || ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  40934738 atttttggtaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 40934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 45286230 - 45286290
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||  |||||| |||||||| |||| |||||||| ||| ||||||||||    
T  45286230 taggcaaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcctttatc 45286290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 395
Target Start/End: Original strand, 47193721 - 47193781
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 395  Q
    ||||||| ||||||||||||||  ||  ||||| | |||||||||||||||||||||||||    
T  47193721 ttttaggtaaaattacacaattcatctattaacataattttaggtaacactttcgtccttt 47193781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 398
Target Start/End: Complemental strand, 731126 - 731055
Alignment:
Q  327 ttaatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||| || ||||| ||||||||||  ||||||||||||||| |||| |||||| | ||| ||||||||||    
T  731126 ttaataaatgttaggtaaaattacacttttagtcccttaacttaatttcaggtaataatttagtcctttatc 731055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 5586802 - 5586743
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  5586802 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatc 5586743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 17191197 - 17191256
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||| ||||||    
T  17191197 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatc 17191256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 25012646 - 25012705
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  |  ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  25012646 aggcaaaattaatcttttagtcccttaacttaattttaggtaacagtttggtcctttatc 25012705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 40770451 - 40770396
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  40770451 aaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 40770396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 44344022 - 44344081
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| |||| ||||||||  || ||||||||||    
T  44344022 aggcaaaattacacttttagtcccttaacttaatttcaggtaacaaattggtcctttatc 44344081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 44344339 - 44344280
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||| ||||||| |||| |||||||| ||| ||||||||||    
T  44344339 aggcaaaattacacttttagtccgttaacttaatttcaggtaacagtttagtcctttatc 44344280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 456
Target Start/End: Original strand, 9172152 - 9172198
Alignment:
Q  410 cgatttagctctttatgttataaaataacaacatagttatccttttt 456  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||    
T  9172152 cgatttagtcctttatattataaaatgacaacatagttatccttttt 9172198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 456
Target Start/End: Original strand, 9180134 - 9180180
Alignment:
Q  410 cgatttagctctttatgttataaaataacaacatagttatccttttt 456  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||||||    
T  9180134 cgatttagtcctttatattataaaatgacaacatagttatccttttt 9180180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 40934416 - 40934474
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||| ||||||| ||||| ||||||| ||| ||||||||||    
T  40934416 ggcaaaattacacttttagtccattaacttaattttgggtaacagtttggtcctttatc 40934474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 27065142 - 27065203
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||   ||||||||||||||| |||| | |||||| ||| ||||||||||    
T  27065142 ttaggcaaaattacatttttagtcccttaacttaatttcatgtaacagtttggtcctttatc 27065203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Original strand, 47420314 - 47420351
Alignment:
Q  423 tatgttataaaataacaacatagttatccttttttatg 460  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  47420314 tatgttataaaatatcaacattgttatccttttttatg 47420351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 8828574 - 8828634
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||||||  ||||||||||||||| |||| |||||||| |||  |||||||||    
T  8828574 taggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttaatcctttatc 8828634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 8853091 - 8853139
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    |||| |||||||||||||  ||||||||||||||| |||| ||||||||    
T  8853091 tttttggcaaaattacacttttagtcccttaacttaatttcaggtaaca 8853139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 12650234 - 12650178
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||| ||||||| |||| |||||||| ||| ||||||||||    
T  12650234 caaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatc 12650178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 26095813 - 26095761
Alignment:
Q  331 tagattttaggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    ||||||| | ||||||||||||  ||||||||||||||| |||| ||||||||    
T  26095813 tagatttaatgcaaaattacacttttagtcccttaacttaatttcaggtaaca 26095761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 33128470 - 33128410
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||| | |||||| ||| |||||||| ||||||||||||| |||  ||||||||    
T  33128470 ttaggcaaaatcatacaatttgtctcttaacttaattttaggtaacatttttatcctttat 33128410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 136913 - 137038
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||  ||||||||||||||||    
T  136913 ttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 137012  T
Q  436 aacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||    
T  137013 aacaacatagttatccttttttatga 137038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 440
Target Start/End: Complemental strand, 137262 - 137158
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||    
T  137262 ttaggcaaaattacataattagtccatttactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 137163  T
Q  436 aacaa 440  Q
     ||||    
T  137162 gacaa 137158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 73687 - 73629
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| || | |||||||| ||| ||||||||||    
T  73687 ggcaaaattacacttttagtcccttaacttaatatcaggtaacagtttggtcctttatc 73629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 330194 - 330319
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||  ||||||||||||||||    
T  330194 ttaggcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 330293  T
Q  436 aacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||    
T  330294 aacaacatagttatccttttttatga 330319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 440
Target Start/End: Complemental strand, 330543 - 330439
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||    
T  330543 ttaggcaaaattacataattagtccatttactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 330444  T
Q  436 aacaa 440  Q
     ||||    
T  330443 gacaa 330439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 8851801 - 8851926
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||    
T  8851801 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 8851900  T
Q  436 aacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||| ||||    
T  8851901 aacaacatagttatcctttttcatga 8851926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 37513436 - 37513314
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||| |    
T  37513436 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatatc 37513337  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||    
T  37513336 aacatagttatccttttttatga 37513314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 333 - 461
Target Start/End: Complemental strand, 25847797 - 25847668
Alignment:
Q  333 gattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttata 431  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||    
T  25847797 gattataggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttata 25847698  T
Q  432 aaataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||| ||||||||||    
T  25847697 aaataacaacatagttatcattttttatga 25847668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 28830103 - 28829975
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataa 432  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||         ||||||||||||  || ||||||||||    
T  28830103 ttttaggcaaaattacacaattagtcccttaactttattttagctaacactttcgtcctttatctttttttttgtcacgatttagtcctctatgttataa 28830004  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||||||||    
T  28830003 aataacaacatagttatccttttttatga 28829975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 11121631 - 11121505
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaa 434  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||  |||||||||||||||    
T  11121631 ttagacaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaa 11121532  T
Q  435 taacaacatagttatccttttttatga 461  Q
    |||||||||||||||||||||| ||||    
T  11121531 taacaacatagttatcctttttcatga 11121505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 22317070 - 22316943
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||    
T  22317070 tttttggcaaaattacacgattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 22316971  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||| ||||||||||||||||||    
T  22316970 ataacaacaaagttatccttttttatga 22316943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 49621329 - 49621202
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||  |||||| |||||||    
T  49621329 tttttggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcctttatattataaa 49621230  T
Q  434 ataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||||||||    
T  49621229 ataacaacatagttatccttttttatga 49621202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 9296382 - 9296504
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||   | ||||||||||||||||    
T  9296382 aggcaaaactacacaattagtcccttaactttattttaggtaacactttcgtcctttatttttttttgtcacgatttagtcatctatgttataaaataac 9296481  T
Q  439 aacatagttatccttttttatga 461  Q
    |||||||||||||||||||||||    
T  9296482 aacatagttatccttttttatga 9296504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 328 - 461
Target Start/End: Original strand, 49711389 - 49711522
Alignment:
Q  328 taatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgt 427  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||   |||||||    
T  49711389 taataaatattaggcaaaattacacaattagtcccttaactttattttaggtaacacttacgtcctttatctttttttatcacgatttagtcatttatgt 49711488  T
Q  428 tataaaataacaacatagttatccttttttatga 461  Q
    ||||||||||||||||||||||| ||||| ||||    
T  49711489 tataaaataacaacatagttatcatttttaatga 49711522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 22975696 - 22975568
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta-tcnnnnnnngtcacgatttagctctttatgttataa 432  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        || |||||||||  |||||||||||||    
T  22975696 attttagacaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttttttttgttacgatttagtcctttatgttataa 22975597  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    |||||||||| ||||||||||||||||||    
T  22975596 aataacaacaaagttatccttttttatga 22975568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 461
Target Start/End: Complemental strand, 36230106 - 36229986
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaataacaa 440  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         ||||||||||||  |||||||||||||||||||||    
T  36230106 aaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataacaa 36230007  T
Q  441 catagttatccttttttatga 461  Q
    ||||||||||||| |||||||    
T  36230006 catagttatccttctttatga 36229986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 48433801 - 48433922
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc---nnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||  || |||||||||||||||||    
T  48433801 aaaattacgcaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctctatgttataaaataaca 48433900  T
Q  440 acatagttatccttttttatga 461  Q
    ||||||||||||||||||||||    
T  48433901 acatagttatccttttttatga 48433922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 22316718 - 22316841
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||     
T  22316718 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatg 22316817  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||  ||||| ||||||||||    
T  22316818 acaatat-cttatcattttttatga 22316841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 3612591 - 3612713
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta--tcnnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |        || |||||||||  ||||||||||||||    
T  3612591 tttaggtaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatttttttttttgtaacgatttagtcctttatgttataaa 3612690  T
Q  434 ataacaacatagttatccttttt 456  Q
    |||||||||||||||||||||||    
T  3612691 ataacaacatagttatccttttt 3612713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 342 - 461
Target Start/End: Complemental strand, 55009442 - 55009321
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||          |||||||||||  ||||||||||| ||||||||    
T  55009442 caaaattacacaattagtcccttaactttattttaagtaacactttcgtcctttatctttttttttatcacgatttagtcctttatgttatcaaataaca 55009343  T
Q  440 acatagttatccttttttatga 461  Q
    ||||||||||| ||||| ||||    
T  55009342 acatagttatcatttttcatga 55009321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 28829753 - 28829873
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||       ||||||||||||  |||||||||||||||| |||    
T  28829753 ggcaaaattacacaattagttctttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgaca 28829852  T
Q  440 acatagttatccttttttatga 461  Q
    | ||  ||||| ||||||||||    
T  28829853 atat-cttatcattttttatga 28829873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 23043178 - 23043309
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-----nnnnnnngtcacgatttagctctttatgtta 429  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||            ||||||||||||  || |||||||    
T  23043178 ttttaggtaaaattacacaataagtcccataactttactttaggtaacactttcgtcctttatcgtttttttttttgtcacgatttagtcctctatgtta 23043277  T
Q  430 taaaataacaacatagttatccttttttatga 461  Q
    |||||||| |||||||||||||||||||||||    
T  23043278 taaaataaaaacatagttatccttttttatga 23043309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 36229766 - 36229884
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaac 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||  |||||||||||||||| ||||     
T  36229766 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaat 36229865  T
Q  442 atagttatccttttttatga 461  Q
    ||  ||||| ||||||||||    
T  36229866 at-cttatcattttttatga 36229884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 8852156 - 8852029
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc--nnnnnnngtcacgatttagctctttatgttataa 432  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||  |||||||||||||    
T  8852156 ttttaggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataa 8852057  T
Q  433 aataacaacatagttatccttttttatga 461  Q
    ||| |||| ||  ||||| ||||||||||    
T  8852056 aatgacaatat-cttatcattttttatga 8852029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 48434147 - 48434091
Alignment:
Q  341 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48434147 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 48434091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 461
Target Start/End: Original strand, 37513089 - 37513212
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||  ||||||||||||||||     
T  37513089 taggcaaaataacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatg 37513188  T
Q  437 acaacatagttatccttttttatga 461  Q
    |||| ||  ||||| ||||||||||    
T  37513189 acaatat-cttatcattttttatga 37513212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 33491750 - 33491692
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33491750 ggcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatc 33491692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 440
Target Start/End: Original strand, 55009098 - 55009198
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||       ||||||||||||  |||||||||||||||||||    
T  55009098 aggcaaaatagcacaattagtct-ttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaataac 55009196  T
Q  439 aa 440  Q
    ||    
T  55009197 aa 55009198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 11121278 - 11121340
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11121278 ttttaggcaaaatagcacaattagtcccttaactttattttaggcaacactttcgtcctttat 11121340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 22975343 - 22975446
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaata 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||        ||||||||||||  ||||||||||||||||     
T  22975343 taggcaaaattacacaattagtcccttaactttattttaggtaacatttttgtcatttatcttttttttgtcacgatttagtcctttatgttataaaatg 22975442  T
Q  437 acaa 440  Q
    ||||    
T  22975443 acaa 22975446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 25847444 - 25847566
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataa 437  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||        ||||||||||||  |||||||||||||||| |    
T  25847444 aggcaaaattatacaattagtcccttaattttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaatga 25847543  T
Q  438 caacatagttatccttttttatga 461  Q
    ||| ||  ||||| ||||||||||    
T  25847544 caatat-cttatcattttttatga 25847566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 456
Target Start/End: Complemental strand, 44506394 - 44506274
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta-tcnnnnnnngtcacgatttagctctttatgttataaa 433  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||| |        || |||||||||  ||||||||||||||    
T  44506394 ttttgggcaaaattacacaattaatcccttaacttaattttaggtaacattttcgtcctttattatttttttgtaacgatttagtcctttatgttataaa 44506295  T
Q  434 ataacaacatagttatccttttt 456  Q
    ||||||||  |||||||||||||    
T  44506294 ataacaac--agttatccttttt 44506274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 461
Target Start/End: Original strand, 17574372 - 17574493
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataac 438  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||        || |||||||||  |||||||||||||||| ||    
T  17574372 aggcaaaattacacaattcgtccattaacttaattttaggtaacactttcgtcctttatttttttttgttacgatttagtcctttatgttataaaattac 17574471  T
Q  439 aacatagttatccttttttatga 461  Q
    || ||  ||||| ||||||||||    
T  17574472 aatat-tttatcattttttatga 17574493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 23043535 - 23043478
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  23043535 ggcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttat 23043478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 397
Target Start/End: Complemental strand, 49711748 - 49711687
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  49711748 tttaagcaaaattacataattagtcccttaactttattttaggtaacactttcgtccgttat 49711687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 33491601 - 33491660
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  33491601 aggcaaaatgacacaattagttccttaactttattttaggtaacagtttcgtcctttatc 33491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 44506049 - 44506104
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  44506049 aaaattacacaattaatcccttaacttaattttaggtaacactttcgtcctttatc 44506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 440
Target Start/End: Original strand, 49620975 - 49621079
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||||||||||||||||        ||||||||||||  ||||||||||||||||    
T  49620975 ttaggcaaaattacacgattaatcctctaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 49621074  T
Q  436 aacaa 440  Q
     ||||    
T  49621075 gacaa 49621079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 41944196 - 41944132
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| | ||| ||||||||||    
T  41944196 attttaggcaaaattacacttttagtcccttaactttattttaggtaatagtttagtcctttatc 41944132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 49984714 - 49984833
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnn-gtcacgatttagctctt-tatgttataaaataacaa 440  Q
    ||||||| || |||||||  |||| |||||||||| ||| | ||||||||||||||        |||||||||||| |||| ||||||||||||||||||    
T  49984714 aaaattataccattagtcttttaattttattttagataatattttcgtcctttatcttttttttgtcacgatttag-tcttctatgttataaaataacaa 49984812  T
Q  441 catagttatccttttttatga 461  Q
    |||||||||||||||||||||    
T  49984813 catagttatccttttttatga 49984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 10687941 - 10687880
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| ||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||    
T  10687941 ttagacaaaattacacaattcgtctcttaacttaattttaggtaacactttcatcctttatc 10687880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 2862700 - 2862759
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||| ||| ||||||||||    
T  2862700 aggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatc 2862759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 31574572 - 31574509
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  31574572 ttttaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatc 31574509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 49985038 - 49984935
Alignment:
Q  358 gtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaataacaacatagttatccttttt 456  Q
    |||||||||||||||||||||||||||||||||| ||||||        ||||||||||||  |||||||||||||||| |||| ||  ||||| |||||    
T  49985038 gtcccttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatat-cttatcattttt 49984940  T
Q  457 tatga 461  Q
    |||||    
T  49984939 tatga 49984935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 39930633 - 39930691
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||    
T  39930633 ggcataattacacaattcgtcctttaacttaattttaggtaacactttagtcctttatc 39930691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 50711313 - 50711251
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  50711313 tttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 50711251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 3612952 - 3612883
Alignment:
Q  329 aatagattttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||| ||||||||||||||||||   |||||| | |||||||||||||||||| |||||||    
T  3612952 aataaattttaggtaaaattacacaattagtcttgtaacttaactttaggtaacactttcgttctttatc 3612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 458
Target Start/End: Complemental strand, 17574632 - 17574596
Alignment:
Q  422 ttatgttataaaataacaacatagttatcctttttta 458  Q
    |||||||||||||||||||||||||||||||||||||    
T  17574632 ttatgttataaaataacaacatagttatcctttttta 17574596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 25061295 - 25061359
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||||  || |||||||||||| |||| |||||||| ||| ||||||||||    
T  25061295 attttaggcaaaattacacttttggtcccttaacttaatttcaggtaacaatttggtcctttatc 25061359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 1342235 - 1342180
Alignment:
Q  343 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||||||||| || ||| |||||||||||||||||||||    
T  1342235 aaaattacacaatttatcccttaacttaatattaagtaacactttcgtcctttatc 1342180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 20209145 - 20209208
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  20209145 tttttggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 20209208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 44664940 - 44664877
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||||  |||||||||||| || |||||||||||||  || ||||||||||    
T  44664940 ttttaggcaaaattacacttttagtcccttaatttaattttaggtaacagattagtcctttatc 44664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 11220992 - 11221050
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| ||||||||||||| |||  |||||||||    
T  11220992 ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttgatcctttatc 11221050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 14463437 - 14463379
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  14463437 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatc 14463379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 44664621 - 44664679
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| ||||||||||    
T  44664621 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttagtcctttatc 44664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 46292578 - 46292640
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  ||||| ||||||||| |||| |||||||| ||| ||||||||||    
T  46292578 tttaggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatc 46292640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 11989517 - 11989573
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| ||||||||||| | ||| ||||||||||    
T  11989517 caaaattacacttttagtcccttaacttaattttaggtaataatttggtcctttatc 11989573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 15543319 - 15543255
Alignment:
Q  334 attttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||| ||||||||  ||||||||||||||| |||| |||||||| |||  |||||||||    
T  15543319 attttaggcataattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatc 15543255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 39778598 - 39778550
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaaca 383  Q
    |||| |||||||||||||  ||||||||||||||| |||||||||||||    
T  39778598 tttttggcaaaattacacttttagtcccttaacttaattttaggtaaca 39778550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 45567410 - 45567466
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| ||||||||||||| ||| ||| ||||||    
T  45567410 caaaattacacttttagtcccttaacttaattttaggtaacagtttagtcttttatc 45567466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 50710891 - 50710947
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttt 395  Q
    ||||||||||||||  ||||||||||||||| |||| |||||||| ||| |||||||    
T  50710891 aggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttt 50710947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 26845206 - 26845147
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 397  Q
    ||||||||||||||   ||||||||| ||||| ||||||||||||| ||| |||||||||    
T  26845206 taggcaaaattacaattttagtccctcaacttaattttaggtaacaatttggtcctttat 26845147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 27812566 - 27812625
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||||| ||||||||| ||||||||||| | ||| ||||||||||    
T  27812566 aggcaaaattacacttttagttccttaacttaattttaggtaatagtttggtcctttatc 27812625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 38674980 - 38675039
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  38674980 aggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 38675039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 461
Target Start/End: Original strand, 45278482 - 45278533
Alignment:
Q  410 cgatttagctctttatgttataaaataacaacatagttatccttttttatga 461  Q
    ||||||||  ||||||||||||||||| ||||||| || |||||||||||||    
T  45278482 cgatttagtcctttatgttataaaatatcaacataattgtccttttttatga 45278533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 49002232 - 49002295
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||| |||||||||||||  ||||||||||||||| | || |||||||| ||| ||||||||||    
T  49002232 tttttggcaaaattacacttttagtcccttaacttaacttcaggtaacagtttggtcctttatc 49002295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 53712246 - 53712309
Alignment:
Q  335 ttttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||| |||||||||   ||||||||||||||| ||||||||||||| |||  |||||||||    
T  53712246 ttttaggtaaaattacagttttagtcccttaacttaattttaggtaacagtttgatcctttatc 53712309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 1341886 - 1341940
Alignment:
Q  344 aaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| |||||||||||| |||    |||||||||||||||||||||    
T  1341886 aaattacacaattcgtcccttaacttaattgctagtaacactttcgtcctttatc 1341940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 14626450 - 14626392
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  |||||| ||||| ||||||||||||||||  || ||||||||||    
T  14626450 ggcaaaattacacttttagtctcttaattttattttaggtaacaacttagtcctttatc 14626392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 21017243 - 21017181
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||||||  ||||| ||||||||| |||| |||||||| ||| ||| ||||||    
T  21017243 tttaggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcatttatc 21017181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 38675295 - 38675237
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||| | |||| |||||||| ||| ||||||||||    
T  38675295 ggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatc 38675237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 44976749 - 44976811
Alignment:
Q  336 tttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||   ||||||||||||||| |||||| |||||| ||| ||| ||||||    
T  44976749 tttaggcaaaattacagttttagtcccttaacttaattttatgtaacagtttggtcttttatc 44976811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 50711170 - 50711112
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||| | ||||||||    
T  50711170 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggacctttatc 50711112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 25080542 - 25080599
Alignment:
Q  225 aaaggttttttcatgcttaagtgttaatgtcacgatgattgaattaacacgtagtgaa 282  Q
    ||||||||||||||| |||||  ||||||||   | ||||||||||||||||||||||    
T  25080542 aaaggttttttcatgattaagatttaatgtcctaaagattgaattaacacgtagtgaa 25080599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 31574248 - 31574309
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||| |   ||| ||||||||||| ||||||||||||| ||| ||||||||||    
T  31574248 ttaggcaaaattatatttttaatcccttaacttaattttaggtaacagtttggtcctttatc 31574309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 6954309 - 6954253
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| ||||||| ||||| ||| ||| ||||||    
T  6954309 caaaattacacttttagtcccttaacttaattttagataacaatttggtcatttatc 6954253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 13997233 - 13997173
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||   |||||||||| |||| |||| |||||||| ||| ||||||||||    
T  13997233 taggcaaaattacatttttagtcccttgacttaatttcaggtaacaatttggtcctttatc 13997173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 20209462 - 20209406
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| | |||||| ||| ||||||||||    
T  20209462 caaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatc 20209406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 43189848 - 43189788
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||| | | || ||||||| |||| | |||||||||||||| ||||||    
T  43189848 taggcaaaattacacaactcgaccattaacttaatttcatgtaacactttcgtcatttatc 43189788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 45214378 - 45214434
Alignment:
Q  342 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    |||||||||||  ||||||||||||||| |||| || ||||| ||| ||||||||||    
T  45214378 caaaattacacttttagtcccttaacttaatttcagttaacagtttggtcctttatc 45214434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 52091773 - 52091713
Alignment:
Q  338 taggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||| |||||||  |||||  |||| ||||||  ||||||||||||||    
T  52091773 taggcaaaattacacaaatagtcccacaacttattttttggtaactttttcgtcctttatc 52091713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 337 - 456
Target Start/End: Complemental strand, 12945 - 12825
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc-nnnnnnngtcacgatttagctctttatgttataaaat 435  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||        || |||||||||  ||||||||||||||||    
T  12945 ttaggcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaat 12846  T
Q  436 aacaacatagttatccttttt 456  Q
    |||||||||||||||||||||    
T  12845 aacaacatagttatccttttt 12825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 340 - 456
Target Start/End: Original strand, 11940 - 12055
Alignment:
Q  340 ggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcnnnnnnngtcacgatttagctctttatgttataaaataaca 439  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |        ||  ||||||||  ||||||||||||||||||||    
T  11940 ggcaaaattacacaattagtcccttaacttaattttaggtaacattttcgttcttt-ttttttttggtatcgatttagtcctttatgttataaaataaca 12038  T
Q  440 acatagttatccttttt 456  Q
    |||||||||||||||||    
T  12039 acatagttatccttttt 12055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 12280 - 12223
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttta 396  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12280 aggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtccttta 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1577 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 943 - 995
Alignment:
Q  409 acgatttagctctttatgttataaaataacaacatagttatccttttttatga 461  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  943 acgatttagtcctttatgttataaaataacaacatagttatccttttttatga 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1577; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 1220 - 1159
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||| ||||||||||||||||||| |||| || ||||||||||||||| |||| |||||||    
T  1220 ttaggtaaaattacacaattagtcctttaatttaattttaggtaacactctcgttctttatc 1159  T

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Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 15112 - 15161
Alignment:
Q  412 atttagctctttatgttataaaataacaacatagttatccttttttatga 461  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  15112 atttagttctttatgttataaaatatcaacatagttatccttttttatga 15161  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 107849 - 107910
Alignment:
Q  337 ttaggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||||  ||| ||||||||||| |||| |||||||| ||| ||||||||||    
T  107849 ttaggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatc 107910  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 323421 - 323480
Alignment:
Q  339 aggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 398  Q
    ||||||||||||||  |||||| |||||||| |||| |||||||| ||| ||||||||||    
T  323421 aggcaaaattacacttttagtctcttaacttaatttcaggtaacagttttgtcctttatc 323480  T

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