View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5052-Insertion-9 (Length: 427)
Name: NF5052-Insertion-9
Description: NF5052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5052-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 102 - 423
Target Start/End: Complemental strand, 41779525 - 41779208
Alignment:
| Q |
102 |
cagatttgatctaataagaactactaatttgacagttaattaaatctataagcttgtttacaaagtttttgagcagagaactactcttggactaagttga |
201 |
Q |
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| T |
41779525 |
cagatttgatctaataagaactactaatttgacagttaa----atctataagcttgtttacaaagtttttgagcagagaactactcttggactaagttga |
41779430 |
T |
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| Q |
202 |
tcttcactcgtgtattatattgcattctttctttacaacaatattggacgatcatttcttaattttatttagtctatagattaagccaatcaatctcatc |
301 |
Q |
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| T |
41779429 |
tcttcactcgtgtattatattgcattctttctttaaaacaatattggatgatcatttcataattttatttagtctatagattaagccaatcaatctcatc |
41779330 |
T |
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| Q |
302 |
tgaatcatattaagtgttagctagactcgtatacatacatcattgaatttctttagacatattaaatgtaaatctaaagaatttatttgataaaatttag |
401 |
Q |
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| T |
41779329 |
tgaatcatatttagtgttagctagactcgtatacatacatcattgaatttctttagacatattaaatgtaaatctaaagaatttatttgataaaatttag |
41779230 |
T |
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| Q |
402 |
aaatgattgagctctaacccat |
423 |
Q |
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| T |
41779229 |
aattgattgagctctaacccat |
41779208 |
T |
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