View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5053_high_13 (Length: 318)
Name: NF5053_high_13
Description: NF5053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5053_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 42 - 300
Target Start/End: Complemental strand, 977934 - 977676
Alignment:
| Q |
42 |
tatgttgacaccattaattgtttattgttactagataatcattttgccgtagagaaatgaaatattgacatatgccaaaaattgaaactagcatcgtgct |
141 |
Q |
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| T |
977934 |
tatgttgacaccattaattgtttattgttactagataatcattttgccgtagagaaatgaaatattgacatatgccaaaaattgaaactagcatcgtgtt |
977835 |
T |
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| Q |
142 |
tcctaagtaatgctatagctaatcacattagcaaaagaataaagttcaaacttgaacattggattttagtgaccgaatcaatagtatttaaattcttatg |
241 |
Q |
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| T |
977834 |
tcctaagtaatgctatagctaatcacattagcaaaagaataaagttcaaacttgaacattggaatttagtgaccgaatcaatagtatttaaattcttatg |
977735 |
T |
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| Q |
242 |
ctcatattggtatatttgtcactctactaacaaagtacatataccatagtgaggagtac |
300 |
Q |
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| T |
977734 |
ctcatattggtatatttgtcactctacaaacaaagtacatataccatagtgaggagtac |
977676 |
T |
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