View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5053_high_24 (Length: 276)
Name: NF5053_high_24
Description: NF5053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5053_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 31696587 - 31696778
Alignment:
| Q |
13 |
aatatgcatttgatattattttaaaagatcagcaaatcttattaagtgaaaggtcataacatttttcctcctgaacaaatttgtagaacaaatattttaa |
112 |
Q |
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| T |
31696587 |
aatatgcatttgatattattttaaaagatcagcaaatcttatgaagtgaaaggtcataacatttttcctcctgaacaaatttgtggaaaaaatattttaa |
31696686 |
T |
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| Q |
113 |
agttcataatacttctcgccatctcactaatgcttgtgttcgttttagggattcaattcgaacgcagtagaaaaaggacatctggtttttta |
204 |
Q |
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| T |
31696687 |
agttcataatacttctcgccatcacactaatgcttgtgttcgttttagggattcaattcgaacgcagaagaaaaaggacatctggtttttta |
31696778 |
T |
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